RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9727
(257 letters)
>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of
P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 228
Score = 115 bits (290), Expect = 3e-32
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 48/223 (21%)
Query: 32 HSMVKPYL-TSGLSIPYWDVHGFALASSNYVRLTADLQSRYGAIWNTVPVYMNNWEVQIT 90
+S P+L S ++P+W G A+ S++ +R+ L+S+ G++W NWEV++T
Sbjct: 9 YSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVT 68
Query: 91 LKIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYL 150
++ G+G + DG+A WY ++ GPVFG+ D ++G+G+ D++ N
Sbjct: 69 FRVTGRG-RIGADGLAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNDGK--------- 118
Query: 151 SAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDG 210
N+P + + NNG ++YDH DG
Sbjct: 119 -------------------------------------KNNPAIVVVGNNGQINYDHQNDG 141
Query: 211 THTQLAGCECKLRNLNHDTHIAIRYEDENLTVSGVNDLLSKGP 253
LA C+ RN + I Y + LTV N
Sbjct: 142 ATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKN 184
>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 221
Score = 109 bits (273), Expect = 1e-29
Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 57/218 (26%)
Query: 28 LKRHHSMVKPYLTSGLSIPYWDVHGFALASSNYVRLTADLQSRYGAIWNTVPVYM-NNWE 86
L +S+ T + W A + LT++ S+ G++W + +++
Sbjct: 6 LSSDYSLPDLINTRKV-PNNWQTGEQASLEEGRIVLTSNQNSK-GSLWLKQGFDLKDSFT 63
Query: 87 VQITLKIHGKGKELFGDGMAFWYVRDRMEG--GPVFGNKDFFSGLGVIIDTYSNHNGEHN 144
++ T + G G++FW+V+D ++ + GL +++D
Sbjct: 64 MEWTFRSVGYS-GQTDGGISFWFVQDSNIPRDKQLYNGPVNYDGLQLLVDNNGPLG---- 118
Query: 145 HNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHY 204
P L +N+G D
Sbjct: 119 ---PTLRGQLNDGQKPVDKTKIY------------------------------------- 138
Query: 205 DHDMDGTHTQLAGCECKLRNLNHDTHIAIRYEDENLTV 242
A C ++ + + I + Y+ E+ +
Sbjct: 139 -------DQSFASCLMGYQDSSVPSTIRVTYDLEDDNL 169
>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 218
Score = 98.9 bits (246), Expect = 7e-26
Identities = 24/224 (10%), Positives = 60/224 (26%), Gaps = 62/224 (27%)
Query: 28 LKRHHSMVKPYLT---SGLSIPYWDVHGFALASSNYVRLTADLQSRYGAIWNTVPVYM-N 83
+ +S+ L + W + LT ++ G++W + +
Sbjct: 2 WNKGYSLP-NLLEVTDQQKELSQWTLGDKVKLEEGRFVLTPGKNTK-GSLWLKPEYSIKD 59
Query: 84 NWEVQITLKIHGKGKELFGDGMAFWYVRDRM--EGGPVFGNKDFFSGLGVIIDTYSNHNG 141
++ T + G G+AFW + G+ F+GL +++
Sbjct: 60 AMTIEWTFRSFGFR-GSTKGGLAFWLKQGNEGDSTELFGGSSKKFNGLMILLRLDDKLG- 117
Query: 142 EHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGS 201
++A +N+G+ D +
Sbjct: 118 ------ESVTAYLNDGTKDLDIESSP---------------------------------- 137
Query: 202 LHYDHDMDGTHTQLAGCECKLRNLNHDTHIAIRYEDENLTVSGV 245
A C + ++ + + + Y + + +
Sbjct: 138 ------------YFASCLFQYQDSMVPSTLRLTYNPLDNHLLKL 169
>g2ltn.1 b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum sativum)
[TaxId: 3888]}
Length = 229
Score = 69.4 bits (169), Expect = 7e-15
Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 17/175 (9%)
Query: 48 WDVHGFALASSNYVRLTADLQSRYGAIWNTVPVYMNN--------WEVQITLKIHGKGKE 99
G + + LT +++ G + P+++ + + T I+
Sbjct: 18 LIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSY 77
Query: 100 LFGDGMAFWYVRDRMEGGPVFGNKDFFSG---------LGVIIDTYSNHNGEHNHNHPYL 150
DG F+ + G F+ + V DT+ N + ++ ++
Sbjct: 78 NVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNRDRHI 137
Query: 151 SAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYD 205
VN+ + + A ++ ++ + Y + S
Sbjct: 138 GIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNVTSYTLSDVVS 192
>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis,
leukoagglutinin [TaxId: 37501]}
Length = 239
Score = 60.2 bits (145), Expect = 2e-11
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 4/144 (2%)
Query: 74 IWNTVPVYMNNWEVQITLKIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSGLGVII 133
IW + ++ T + ++ DG+AF+ + +K + GL
Sbjct: 58 IWGNTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSK--YLGLFNNS 115
Query: 134 DTYSNHNGEHNHNHPYLSAMVNNGSLHYDH-DMDGTHTQLAVIIDTYSNHNGEHNHNHPY 192
++ S++ Y + + +Y H +D + + + G Y
Sbjct: 116 NSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITY 175
Query: 193 LSAMVNNGSLHYDHDMDGTHTQLA 216
L+ + + T +A
Sbjct: 176 LAPN-KTLIASLVYPSNQTTFSVA 198
>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa),
isolectin b4 [TaxId: 3911]}
Length = 233
Score = 59.7 bits (144), Expect = 2e-11
Identities = 21/170 (12%), Positives = 45/170 (26%), Gaps = 19/170 (11%)
Query: 57 SSNYVRLTAD-----LQSRYGAIWNTVPVYMNN------WEVQITLKIHGKGKELFGDGM 105
S+ + LTA + G P+++++ + + + DG+
Sbjct: 28 SAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTTLASFTTSFSFVMAAPAAAAVADGL 87
Query: 106 AFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDM 165
AF+ + G F H+ + N +Y H
Sbjct: 88 AFFLAPPDTQPQARGGFLGLF--------ADRAHDASYQTVAVEFDTYSNAWDPNYTHIG 139
Query: 166 DGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQL 215
T+ + + GE + A + + T +
Sbjct: 140 IDTNGIESKKTTPFDMVYGEKANIVITYQASTKALAASLVFPVSQTSYAV 189
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 233
Score = 59.0 bits (142), Expect = 4e-11
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 74 IWNTVPVYMNNWEVQITLKIHGKGKELFGDGMAFWYVRDR-------MEGGPVFGNKDFF 126
IW+ + ++ T I DG+AF V G G+ F
Sbjct: 57 IWDNTTGTVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNF 116
Query: 127 SGLGVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSN 181
+ V DT N + + H + VN+ D + + A ++ TY +
Sbjct: 117 HTVAVEFDTLYNKDWDPTERH--IGIDVNSIRSIKTTRWDFVNGENAEVLITYDS 169
>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia
pseudoacacia) [TaxId: 35938]}
Length = 237
Score = 58.6 bits (141), Expect = 5e-11
Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 25/159 (15%)
Query: 46 PYWDVHGFALASSN-YVRLTADLQSRYGA-------------IWNTVPVYMNNWEVQITL 91
PY G AL +S ++LT + + IW++ + ++ T
Sbjct: 16 PYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTF 75
Query: 92 KIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSG---------LGVIIDTYSNHNGE 142
I DG+AF+ + + G F + V DT+SN + +
Sbjct: 76 IIQAPNPATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDWD 135
Query: 143 HNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSN 181
H + VN+ + T+ ++A + +Y
Sbjct: 136 PKGRHLGI--NVNSIESIKTVPWNWTNGEVANVFISYEA 172
>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 204
Score = 57.1 bits (137), Expect = 2e-10
Identities = 19/170 (11%), Positives = 50/170 (29%), Gaps = 14/170 (8%)
Query: 41 SGLSIPYWDVHGFA-LASSNYVRLTADLQSRYGAIWNTVPVYMNN--------WEVQITL 91
+ + G A ++S+ ++L+ + + + P+ + + ++ T+
Sbjct: 9 DAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTM 68
Query: 92 KIHGKGKELFGDGMAFWYVRDR-MEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYL 150
I + G+ F V + G + + ID +N +
Sbjct: 69 NIRTHRQANSAVGLDFVLVPVQPESKGDTVTVEFDTFLSRISIDVNNNDIKSVPWDVHDY 128
Query: 151 SAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNG 200
+ Y + + +V + S + L V +
Sbjct: 129 DGQNAEVRITY----NSSTKVFSVSLSNPSTGKSNNVSTTVELEKEVYDW 174
>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos
biflorus), different isoforms [TaxId: 3840]}
Length = 253
Score = 57.4 bits (138), Expect = 2e-10
Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 27/154 (17%)
Query: 41 SGLSIPYWDVHGFALASSNYVRLTADLQSRYGA--------------IWNTVPVYMNNWE 86
+ + + G A SS+ +RLT + I++ + +W
Sbjct: 9 KNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWA 68
Query: 87 VQITLKIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFF---------SGLGVIIDTYS 137
T I K DG+AF V E G F + V DT+S
Sbjct: 69 TSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFS 128
Query: 138 NHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQ 171
N + + H ++ S+
Sbjct: 129 NTDWDPTSRHI----GIDVNSIKSIRTASWGLAN 158
>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus
angolensis) [TaxId: 182271]}
Length = 241
Score = 56.3 bits (135), Expect = 4e-10
Identities = 20/152 (13%), Positives = 37/152 (24%), Gaps = 16/152 (10%)
Query: 51 HGFALASSNYVRLTADLQSRYGA--------------IWNTVPVYMNNWEVQITLKIHGK 96
G A +N V+LT + +W + N++ Q + +
Sbjct: 21 QGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSFSLKSP 80
Query: 97 GKELFGDGMAFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMVNN 156
F D G G +T +N + + N
Sbjct: 81 LSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQV-IAVEFDTFYAQDSNT 139
Query: 157 GSLHYDH-DMDGTHTQLAVIIDTYSNHNGEHN 187
+Y H +D + + N
Sbjct: 140 WDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLN 171
>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 226
Score = 54.0 bits (129), Expect = 2e-09
Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 21/179 (11%)
Query: 41 SGLSIPYWDVHGFALASSN-YVRLTADLQSRYGA-----------IWNTVPVYMNNWEVQ 88
+ + G A SS ++ LT + + I + + ++
Sbjct: 9 ETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTN 68
Query: 89 ITLKIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEH---NH 145
T +I+ K E G+AF V F+ D ++ N
Sbjct: 69 FTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAVVFDTVSNR 128
Query: 146 NHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHN------GEHNHNHPYLSAMVN 198
++++ + + + I ++ + ++SA V
Sbjct: 129 IEIDVNSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLYPSSEEKCHVSATVP 187
>g1qmo.1 b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolichos
lablab), Fril [TaxId: 35936]}
Length = 230
Score = 52.8 bits (126), Expect = 5e-09
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 21/141 (14%)
Query: 51 HGFALASSNYVRLTADLQ------SRYGAIWNTVPVYMNN-------WEVQITLKIHGKG 97
G A +++N +++T S G + + P+ + ++ I +I
Sbjct: 21 QGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWEDSAVLTSFDTIINFEISTPY 80
Query: 98 KELFGDGMAFWYVRDRMEGGPVFGNKDFF-----SGLGVIIDTYSNHNGEH---NHNHPY 149
DG+AF+ G F + + V DTY N + H
Sbjct: 81 TSRIADGLAFFIAPPDSVISYHGGFLGLFPNANSNVVAVEFDTYLNPDYGDPNYIHIGID 140
Query: 150 LSAMVNNGSLHYDHDMDGTHT 170
++++ + + +D T
Sbjct: 141 VNSIRSKVTAKWDWQNGKIAT 161
>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId:
3847]}
Length = 251
Score = 49.0 bits (116), Expect = 1e-07
Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 74 IWNTVPVYMNNWEVQITLKIHGKGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSG----- 128
IW+ + ++ + + DG+AF+ + G F+
Sbjct: 59 IWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGD 118
Query: 129 --LGVIIDTYSNHN-GEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHN-- 183
+ V DT+ N + H ++++ + + +D + V+I ++ +
Sbjct: 119 QVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTSWDLANNKVAK---VLITYDASTSLL 175
Query: 184 -----GEHNHNHPYLSAMVN 198
LS +V+
Sbjct: 176 VASLVYPSQRTSNILSDVVD 195
>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a
[TaxId: 3885]}
Length = 228
Score = 48.6 bits (115), Expect = 1e-07
Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 24/143 (16%)
Query: 57 SSNYVRLTADLQS------RYGAIWNTVPVYMNN------WEVQITLKIHGKGKELFGDG 104
S ++LT + G + + P+ + + + T I K + + G
Sbjct: 27 SKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSNNVASFNTNFTFIIRAKNQSISAYG 86
Query: 105 MAFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHD 164
+AF V LG+ N ++ + N D D
Sbjct: 87 LAFALVPVNSPPQKKQE------FLGIFNTNNP------EPNARTVAVVFNTFKNRIDFD 134
Query: 165 MDGTHTQLAVIIDTYSNHNGEHN 187
+ + D + + + +
Sbjct: 135 KNFIKPYVNENCDFHKYNGEKTD 157
>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea)
[TaxId: 3818]}
Length = 232
Score = 42.1 bits (98), Expect = 3e-05
Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 26/167 (15%)
Query: 57 SSNYVRLTADLQSRYGA---------IWNTVPVYMNNWEVQITLKIHGKGKELFGDGMAF 107
S+ ++LT + IW++ + ++ + ++ DG+ F
Sbjct: 28 SNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDPADGIIF 87
Query: 108 WYVRDRMEGGP---------VFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMVNNGS 158
+ + + V K +GV DTYSN ++ ++ VN+
Sbjct: 88 FIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEY-NDPPTDHVGIDVNSVD 146
Query: 159 LHYDHDM---DGTHTQLAVIIDTYSN----HNGEHNHNHPYLSAMVN 198
G ++ VI D+ + N + ++ +V+
Sbjct: 147 SVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITTIAQVVD 193
>d1qnga_ b.62.1.1 (A:) Cyclophilin (eukaryotic) {Plasmodium
falciparum [TaxId: 5833]}
Length = 170
Score = 30.6 bits (68), Expect = 0.11
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 76 NTVPVYMNNW-EVQITLKIHGKGKELFGDGMAFWYV-RDRMEGGPVFGNKDFFSGLGVII 133
+ P N+ + KI +GK L F + M G N + G +
Sbjct: 27 DITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYG 86
Query: 134 DTYSNHNGEHNHNHPYLSAMVNNG 157
++++ N H+ P L +M N G
Sbjct: 87 RSFTDENFNMKHDQPGLLSMANAG 110
>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina
crista-galli) [TaxId: 49817]}
Length = 239
Score = 30.4 bits (68), Expect = 0.14
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 157 GSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHP--YLSAMVNNGSLHYDHDMDGTHT 213
+ + D ++ LAV DT+SN H ++++ + + + D
Sbjct: 109 LGVFNNSKQDNSYQTLAVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVAN 167
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 330
Score = 27.4 bits (61), Expect = 1.7
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 2 FKILFTVIALIWQVVAQEAQWNTEDFLKRHHSMVKPYLTSGLSIPYWDVHGFALASSNYV 61
F F + + +A +A +D L RH + +L + + L S NYV
Sbjct: 157 FYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKL-LHSENYV 215
>d2cfea1 b.62.1.1 (A:1-162) Cyclophilin-like allergen Mal s 6
{Malassezia sympodialis [TaxId: 76777]}
Length = 162
Score = 27.0 bits (59), Expect = 1.9
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 98 KELFGDGMAFWYVRDRME---GGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMV 154
K G F V G GN G + +++ N + HN P L +M
Sbjct: 42 KGFGYAGSHFHRVIPDFMLQGGDFTAGNG--TGGKSIYGAKFADENFQLKHNKPGLLSMA 99
Query: 155 NNG 157
N G
Sbjct: 100 NAG 102
Score = 25.8 bits (56), Expect = 4.1
Identities = 10/63 (15%), Positives = 20/63 (31%)
Query: 138 NHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMV 197
G + + + D ++ +++ N + HN P L +M
Sbjct: 40 GEKGFGYAGSHFHRVIPDFMLQGGDFTAGNGTGGKSIYGAKFADENFQLKHNKPGLLSMA 99
Query: 198 NNG 200
N G
Sbjct: 100 NAG 102
>d1j0pa_ a.138.1.1 (A:) Cytochrome c3 {Desulfovibrio vulgaris
[TaxId: 881]}
Length = 108
Score = 25.6 bits (55), Expect = 2.9
Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 8/75 (10%)
Query: 154 VNNGSLHYDHDMDGTHTQLAVII------DTYSNHNGEHNHNHPYLSAMVNNGSLHYDHD 207
V G H+ + + A + G ++ H + + H +
Sbjct: 29 VKCGDCHHPVNGKEDLQKCATAGCHDNMDKKDKSAKGYYHAMHDKGTKFKSCVGCHLETA 88
Query: 208 MDG--THTQLAGCEC 220
+L GC+
Sbjct: 89 GADAAKKKELTGCKG 103
>g1cxp.1 a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 570
Score = 26.6 bits (58), Expect = 3.9
Identities = 11/64 (17%), Positives = 16/64 (25%)
Query: 174 VIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAGCECKLRNLNHDTHIAI 233
+ + + S M DHD+D T CE + I
Sbjct: 63 AVSNEIVRFPTDQLTPDQERSLMFMQWGQLLDHDLDFTPEPAVNCETSCVQQPPCFPLKI 122
Query: 234 RYED 237
D
Sbjct: 123 PPND 126
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume
(Griffonia simplicifolia) [TaxId: 3850]}
Length = 243
Score = 26.2 bits (57), Expect = 4.1
Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 48/187 (25%)
Query: 52 GFALASSNYVRLTAD------LQSRYGAIWNTVPVYMNN-------WEVQITLKIHGKGK 98
G A ++LT ++S G + PV++ + + T +
Sbjct: 26 GDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTF-LLKNYG 84
Query: 99 ELFGDGMAFWYVRDRMEGGP-----------VFGNKDFFSGLGVIIDTYSNHN-GEHNHN 146
DG+AF+ + + V DT+ N + + +
Sbjct: 85 APTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYP 144
Query: 147 H--------------PYLSAMVNNGSLHYDH-DMDGTHTQLAVIIDTYSNHNGEHNHNHP 191
H + + S+ H D L V++ +
Sbjct: 145 HIGIDVNSIVSVATTRWENDDAYGSSIATAHITYDARSKILTVLLSY-------EHGRDY 197
Query: 192 YLSAMVN 198
LS +V+
Sbjct: 198 ILSHVVD 204
>d1hyoa2 d.177.1.1 (A:119-416) Fumarylacetoacetate hydrolase, FAH,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 298
Score = 25.5 bits (55), Expect = 6.5
Identities = 10/91 (10%), Positives = 17/91 (18%), Gaps = 3/91 (3%)
Query: 96 KGKELFGDGMAFWYVRDRMEGGPVFGNKDFFSGLGVIIDTYSNHNGEHNHNHPYLSAMVN 155
G L D A + F K F + + + N +
Sbjct: 108 FGMVLMNDWSARDIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPL- 166
Query: 156 NGSLHYDHDMDGTHTQLAVIIDTYSNHNGEH 186
L+V +
Sbjct: 167 --PYLCHSQPYTFDINLSVSLKGEGMSQAAT 195
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 279
Score = 25.5 bits (55), Expect = 7.4
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 159 LHYDHDMDGTHTQLAVIIDTYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAGC 218
+H D D+ +T + +Y N + +P+L+A+ N L+ + H +L
Sbjct: 10 VHEDMDVAKVYTGEMGRLKSYENQKPPFDAKNPFLAAVTANRKLNQGTERHLMHLELDIS 69
Query: 219 ECKLRNLNHDTHIAIRYEDENLTVSGVNDLL 249
+ K+ H+A+ +++ V+ + ++L
Sbjct: 70 DSKI-RYESGDHVAVYPANDSALVNQIGEIL 99
>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
Length = 203
Score = 25.1 bits (54), Expect = 8.2
Identities = 8/88 (9%), Positives = 17/88 (19%), Gaps = 2/88 (2%)
Query: 129 LGVIID--TYSNHNGEHNHNHPYLSAMVNNGSLHYDHDMDGTHTQLAVIIDTYSNHNGEH 186
L ++ D + + H L + N +
Sbjct: 7 LYIVADHTLFLTRHRNLQHTKQRLLEVANYVDQLLRTLDIQVALTGLEVWTERDRSRVTQ 66
Query: 187 NHNHPYLSAMVNNGSLHYDHDMDGTHTQ 214
+ N + + L D
Sbjct: 67 DANATLWAFLQWRRGLWAQRPHDSAQLL 94
>d2c9va1 b.1.8.1 (A:1-153) Cu,Zn superoxide dismutase, SOD {Human
(Homo sapiens) [TaxId: 9606]}
Length = 153
Score = 24.6 bits (53), Expect = 8.8
Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 157 GSLHYDHDMDGTHTQLAVIIDTYSNHN-GEHNHNHPYLSAMVNNGSLHYDHDMDGTH--- 212
G ++++ ++ I + G H H +A + H++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPK 75
Query: 213 --TQLAGCECKLRNLNHDTHIAIRYEDENLTVSGVNDLL 249
+ G + + D + ED +++SG + ++
Sbjct: 76 DEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCII 113
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.437
Gapped
Lambda K H
0.267 0.0507 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,044,445
Number of extensions: 48957
Number of successful extensions: 231
Number of sequences better than 10.0: 1
Number of HSP's gapped: 192
Number of HSP's successfully gapped: 52
Length of query: 257
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 174
Effective length of database: 1,268,006
Effective search space: 220633044
Effective search space used: 220633044
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.3 bits)