Psyllid ID: psy9736

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Protein Sequence
MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Secondary Structure (PSIPRED)
ccccccEEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHcccccccccHHccccccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccEEEEEEccccccEEEEEEEccccccccccEEEEEEccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccHHEEEccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHccccHHcccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHcccccHHEEEHEEEcccEEEEEEEEcccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccEEccccHHHEEEcccccEEEccccccccccccccHHHHcccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHcccccHHHHHHHHcccccccccHHHcccccccccEEEccccccccccccccccccccccHccccHHHHHccccccccEEHHHHHEEHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHcccHHHcccHHHHHHcHHHHHccccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mkrgvtidrfssddRRFFSKIlsnpitlaqqpkkeLIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEylpggsltdvvtetcmdeGQIAAVCREVLQALEFlhsnqvihrdiksdnillgldgsvklskwNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIesstgmepkkeLIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYlvgeelwytkpieepsnttdektstssasplstpplsliqppppstpprstlngaltslpppvvldknknqttpptgltgsileflgphkwsfqphflipYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLllkhpflkiarplaslTPLIMAAKEAAKGH
Flexible Loop (DISEMBL)
mkrgvtidrfssddrrfFSKIlsnpitlaqqpkkELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAiesstgmepkkELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Low Complexity Region (SEG)
MKRGVTIdrfssddrrffsKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKtstssasplstpplsliqppppstpprstlNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Disordered region (IsUnstruct)
***************RFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK*******************************************************************LTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIK*KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIM*********
Disordered Region (DISOPRED)
*KRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQP*******RSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNK****KE*EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA*K******
Disordered Region (DISEMBL)
MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE*********************LSLI**********STLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Disordered Region (DISPRO)
***GVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAA***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	400	2.2.26 [Sep-21-2011]
P35465	544	Serine/threonine-protein	yes	N/A	0.267	0.196	0.898	1e-52
Q13153	545	Serine/threonine-protein	yes	N/A	0.267	0.196	0.898	1e-52
Q08E52	544	Serine/threonine-protein	yes	N/A	0.267	0.196	0.898	1e-52
O88643	545	Serine/threonine-protein	yes	N/A	0.267	0.196	0.898	2e-52
Q62829	544	Serine/threonine-protein	no	N/A	0.267	0.196	0.888	3e-52
Q61036	559	Serine/threonine-protein	no	N/A	0.267	0.191	0.888	4e-52
Q7YQL3	559	Serine/threonine-protein	N/A	N/A	0.267	0.191	0.888	5e-52
Q7YQL4	559	Serine/threonine-protein	no	N/A	0.267	0.191	0.888	5e-52
O75914	559	Serine/threonine-protein	no	N/A	0.267	0.191	0.888	5e-52
Q64303	524	Serine/threonine-protein	no	N/A	0.302	0.230	0.696	2e-48

>sp|P35465|PAK1_RAT Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus GN=Pak1 PE=1 SV=3

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 407

The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2. Phosphorylates MYL9/MLC2 (By similarity). Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q13153|PAK1_HUMAN Serine/threonine-protein kinase PAK 1 OS=Homo sapiens GN=PAK1 PE=1 SV=2

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 301 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 360

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 361 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 408

The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2. Phosphorylates MYL9/MLC2. Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q08E52|PAK1_BOVIN Serine/threonine-protein kinase PAK 1 OS=Bos taurus GN=PAK1 PE=1 SV=1

 Score =  207 bits (527), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 407

The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2 (By similarity). Phosphorylates MYL9/MLC2. Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O88643|PAK1_MOUSE Serine/threonine-protein kinase PAK 1 OS=Mus musculus GN=Pak1 PE=1 SV=1

 Score =  207 bits (526), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 301 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 360

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 361 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 408

The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L1 and CDC2L2. Phosphorylates MYL9/MLC2. Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q62829|PAK3_RAT Serine/threonine-protein kinase PAK 3 OS=Rattus norvegicus GN=Pak3 PE=1 SV=1

 Score =  206 bits (523), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 299 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 358

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 359 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 406

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q61036|PAK3_MOUSE Serine/threonine-protein kinase PAK 3 OS=Mus musculus GN=Pak3 PE=1 SV=2

 Score =  205 bits (522), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 314 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 373

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 374 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 421

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7YQL3|PAK3_PONPY Serine/threonine-protein kinase PAK 3 OS=Pongo pygmaeus GN=PAK3 PE=2 SV=1

 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 314 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 373

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 374 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 421

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7YQL4|PAK3_PANTR Serine/threonine-protein kinase PAK 3 OS=Pan troglodytes GN=PAK3 PE=2 SV=1

 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 314 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 373

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 374 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 421

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75914|PAK3_HUMAN Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2

 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 314 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 373

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 374 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 421

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, or cell cycle regulation. Plays a role in dendrite spine morphogenesis as well as synapse formation and plasticity. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Additionally, phosphorylates TNNI3/troponin I to modulate calcium sensitivity and relaxation kinetics of thin myofilaments.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q64303|PAK2_RAT Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus GN=Pak2 PE=1 SV=1

 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 110/132 (83%)

Query: 3   RGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG 62
           +G +   F++ D     ++    I L +QPKKELIINEILVM+E K+PNIVN+LDSYLVG
Sbjct: 257 QGASGTVFTATDVALGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSYLVG 316

Query: 63  EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +EL+VVMEYL GGSLTDVVTETCMDE QIAAVCRE LQALEFLH+NQVIHRDIKSDN+LL
Sbjct: 317 DELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL 376

Query: 123 GLDGSVKLSKWN 134
           G++GSVKL+ + 
Sbjct: 377 GMEGSVKLTDFG 388

Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
347968998	794	AGAP002986-PA [Anopheles gambiae str. PE	0.27	0.136	0.917	4e-53
347969000	704	AGAP002986-PB [Anopheles gambiae str. PE	0.267	0.151	0.925	6e-53
312375361	926	hypothetical protein AND_14269 [Anophele	0.245	0.105	0.908	7e-53
442617725	840	PAK-kinase, isoform F [Drosophila melano	0.242	0.115	0.916	9e-53
340719433	537	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.27	0.201	0.908	1e-52
195152181	547	GL21741 [Drosophila persimilis] gi|19411	0.242	0.177	0.916	1e-52
195109983	713	GI23008 [Drosophila mojavensis] gi|19391	0.242	0.136	0.916	1e-52
350408833	585	PREDICTED: serine/threonine-protein kina	0.27	0.184	0.908	1e-52
328789848	582	PREDICTED: serine/threonine-protein kina	0.27	0.185	0.908	1e-52
350408836	589	PREDICTED: serine/threonine-protein kina	0.27	0.183	0.908	1e-52

>gi|347968998|ref|XP_311901.5| AGAP002986-PA [Anopheles gambiae str. PEST] gi|333467743|gb|EAA08104.5| AGAP002986-PA [Anopheles gambiae str. PEST]

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/109 (91%), Positives = 105/109 (96%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 551 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 610

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL+ + 
Sbjct: 611 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLTDFG 659

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969000|ref|XP_003436338.1| AGAP002986-PB [Anopheles gambiae str. PEST] gi|333467744|gb|EGK96675.1| AGAP002986-PB [Anopheles gambiae str. PEST]

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 100/108 (92%), Positives = 105/108 (97%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 461 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 520

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL+ +
Sbjct: 521 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLTDF 568

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375361|gb|EFR22750.1| hypothetical protein AND_14269 [Anopheles darlingi]

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 99/109 (90%), Positives = 105/109 (96%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 683 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 742

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ + 
Sbjct: 743 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 791

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442617725|ref|NP_001262310.1| PAK-kinase, isoform F [Drosophila melanogaster] gi|442617727|ref|NP_001138013.2| PAK-kinase, isoform G [Drosophila melanogaster] gi|442617729|ref|NP_001262311.1| PAK-kinase, isoform H [Drosophila melanogaster] gi|442617731|ref|NP_001262312.1| PAK-kinase, isoform I [Drosophila melanogaster] gi|440217123|gb|AGB95693.1| PAK-kinase, isoform F [Drosophila melanogaster] gi|440217124|gb|ACL83472.2| PAK-kinase, isoform G [Drosophila melanogaster] gi|440217125|gb|AGB95694.1| PAK-kinase, isoform H [Drosophila melanogaster] gi|440217126|gb|AGB95695.1| PAK-kinase, isoform I [Drosophila melanogaster]

 Score =  214 bits (544), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 99/108 (91%), Positives = 105/108 (97%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 597 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 656

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCREVLQALEFLH+NQVIHRDIKSDNILLGLDGSVKL+ +
Sbjct: 657 MDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDF 704

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719433|ref|XP_003398158.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 1-like [Bombus terrestris]

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/109 (90%), Positives = 104/109 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC
Sbjct: 294 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 353

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLH NQVIHRDIKSDNILLGLDG VKL+ + 
Sbjct: 354 MDEGQIAAVCREVLQALEFLHCNQVIHRDIKSDNILLGLDGGVKLTDFG 402

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195152181|ref|XP_002017015.1| GL21741 [Drosophila persimilis] gi|194112072|gb|EDW34115.1| GL21741 [Drosophila persimilis]

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/108 (91%), Positives = 105/108 (97%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 304 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 363

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCREVLQALEFLH+NQVIHRDIKSDNILLGLDGSVKL+ +
Sbjct: 364 MDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDF 411

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195109983|ref|XP_001999561.1| GI23008 [Drosophila mojavensis] gi|193916155|gb|EDW15022.1| GI23008 [Drosophila mojavensis]

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/108 (91%), Positives = 105/108 (97%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct: 470 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 529

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCREVLQALEFLH+NQVIHRDIKSDNILLGLDGSVKL+ +
Sbjct: 530 MDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDF 577

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408833|ref|XP_003488530.1| PREDICTED: serine/threonine-protein kinase PAK 1-like isoform 1 [Bombus impatiens]

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/109 (90%), Positives = 104/109 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC
Sbjct: 342 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 401

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLH NQVIHRDIKSDNILLGLDG VKL+ + 
Sbjct: 402 MDEGQIAAVCREVLQALEFLHCNQVIHRDIKSDNILLGLDGGVKLTDFG 450

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789848|ref|XP_001119958.2| PREDICTED: serine/threonine-protein kinase PAK 1 isoform 1 [Apis mellifera]

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/109 (90%), Positives = 104/109 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC
Sbjct: 339 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 398

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLH NQVIHRDIKSDNILLGLDG VKL+ + 
Sbjct: 399 MDEGQIAAVCREVLQALEFLHCNQVIHRDIKSDNILLGLDGGVKLTDFG 447

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408836|ref|XP_003488531.1| PREDICTED: serine/threonine-protein kinase PAK 1-like isoform 2 [Bombus impatiens]

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/109 (90%), Positives = 104/109 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC
Sbjct: 346 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 405

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCREVLQALEFLH NQVIHRDIKSDNILLGLDG VKL+ + 
Sbjct: 406 MDEGQIAAVCREVLQALEFLHCNQVIHRDIKSDNILLGLDGGVKLTDFG 454

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	400
FB|FBgn0014001	815	Pak "PAK-kinase" [Drosophila m	0.265	0.130	0.933	6.2e-78
UNIPROTKB|E1C3P6	544	PAK1 "Uncharacterized protein"	0.265	0.194	0.924	7.6e-72
UNIPROTKB|Q08E52	544	PAK1 "Serine/threonine-protein	0.265	0.194	0.915	2.6e-71
UNIPROTKB|Q13153	545	PAK1 "Serine/threonine-protein	0.265	0.194	0.915	2.6e-71
RGD|3250	544	Pak1 "p21 protein (Cdc42/Rac)-	0.265	0.194	0.915	2.6e-71
UNIPROTKB|F1SUK2	544	LOC100525766 "Uncharacterized	0.265	0.194	0.915	2.6e-71
UNIPROTKB|F7AM77	544	PAK1 "Uncharacterized protein"	0.265	0.194	0.915	4.2e-71
RGD|3251	544	Pak3 "p21 protein (Cdc42/Rac)-	0.265	0.194	0.905	5.3e-71
UNIPROTKB|Q62829	544	Pak3 "Serine/threonine-protein	0.265	0.194	0.905	5.3e-71
UNIPROTKB|E1B7J7	523	PAK3 "Uncharacterized protein"	0.265	0.202	0.905	6.8e-71

FB|FBgn0014001 Pak "PAK-kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 515 (186.3 bits), Expect = 6.2e-78, Sum P(2) = 6.2e-78
 Identities = 99/106 (93%), Positives = 104/106 (98%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L+QQPKKELIINEILVMRENKHPN+VNYLDSYLV EELWVVMEYLPGGSLTDVVTETC
Sbjct:   572 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETC 631

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCREVLQALEFLH+NQVIHRDIKSDNILLGLDGSVKL+
Sbjct:   632 MDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLT 677

GO:0005925 "focal adhesion" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IDA;NAS

GO:0007155 "cell adhesion" evidence=IDA

GO:0007411 "axon guidance" evidence=IGI;IMP;TAS;IPI

GO:0007254 "JNK cascade" evidence=NAS

GO:0007391 "dorsal closure" evidence=IMP;TAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0016601 "Rac protein signal transduction" evidence=NAS

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IMP

GO:0050803 "regulation of synapse structure and activity" evidence=IMP

GO:0050770 "regulation of axonogenesis" evidence=IGI

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0019991 "septate junction assembly" evidence=IMP

UNIPROTKB|E1C3P6 PAK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 501 (181.4 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
 Identities = 98/106 (92%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVGEELWVVMEYL GGSLTDVVTETC
Sbjct:   300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGEELWVVMEYLAGGSLTDVVTETC 359

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 405

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=IEA

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0043113 "receptor clustering" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IEA

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IEA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=IEA

UNIPROTKB|Q08E52 PAK1 "Serine/threonine-protein kinase PAK 1" [Bos taurus (taxid:9913)]

 Score = 498 (180.4 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 405

GO:0031532 "actin cytoskeleton reorganization" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0001726 "ruffle" evidence=ISS

GO:0005518 "collagen binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=ISS

GO:0051496 "positive regulation of stress fiber assembly" evidence=ISS

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISS

GO:0042060 "wound healing" evidence=ISS

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=ISS

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0005925 "focal adhesion" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0043113 "receptor clustering" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q13153 PAK1 "Serine/threonine-protein kinase PAK 1" [Homo sapiens (taxid:9606)]

 Score = 498 (180.4 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   301 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 360

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   361 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 406

GO:0005524 "ATP binding" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0033554 "cellular response to stress" evidence=IEA

GO:0043113 "receptor clustering" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0043507 "positive regulation of JUN kinase activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005518 "collagen binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA;TAS

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=IDA

GO:0001726 "ruffle" evidence=IDA

GO:0005911 "cell-cell junction" evidence=IDA

GO:0042060 "wound healing" evidence=IMP

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=IMP

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IMP

GO:0043234 "protein complex" evidence=IDA

GO:0051496 "positive regulation of stress fiber assembly" evidence=IMP

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=IDA

GO:0031532 "actin cytoskeleton reorganization" evidence=IDA;IMP

GO:0048812 "neuron projection morphogenesis" evidence=ISS

GO:0014704 "intercalated disc" evidence=ISS

GO:0030018 "Z disc" evidence=ISS

GO:0030424 "axon" evidence=ISS

GO:0030425 "dendrite" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

GO:0031941 "filamentous actin" evidence=NAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0031295 "T cell costimulation" evidence=TAS

GO:0050852 "T cell receptor signaling pathway" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0005794 "Golgi apparatus" evidence=IDA

RGD|3250 Pak1 "p21 protein (Cdc42/Rac)-activated kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 498 (180.4 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 405

GO:0000165 "MAPK cascade" evidence=ISO;TAS

GO:0000186 "activation of MAPKK activity" evidence=TAS

GO:0001666 "response to hypoxia" evidence=IDA

GO:0001726 "ruffle" evidence=ISO;ISS

GO:0004672 "protein kinase activity" evidence=ISO;ISS;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA;TAS

GO:0004709 "MAP kinase kinase kinase activity" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005518 "collagen binding" evidence=ISO;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005794 "Golgi apparatus" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;ISS;IDA

GO:0005911 "cell-cell junction" evidence=ISO;ISS

GO:0005925 "focal adhesion" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS;IMP;TAS

GO:0006887 "exocytosis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0007528 "neuromuscular junction development" evidence=IEA;ISO

GO:0010033 "response to organic substance" evidence=IDA

GO:0014704 "intercalated disc" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0016358 "dendrite development" evidence=IEA;ISO

GO:0019901 "protein kinase binding" evidence=IPI

GO:0030018 "Z disc" evidence=IDA

GO:0030424 "axon" evidence=ISO;IDA

GO:0030425 "dendrite" evidence=IDA

GO:0030426 "growth cone" evidence=IEA;ISO

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO;ISS

GO:0031965 "nuclear membrane" evidence=IDA

GO:0032869 "cellular response to insulin stimulus" evidence=IDA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IMP

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=ISO;ISS

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=ISO;ISS

GO:0033554 "cellular response to stress" evidence=IDA

GO:0042060 "wound healing" evidence=ISO;ISS

GO:0042802 "identical protein binding" evidence=ISO

GO:0043113 "receptor clustering" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=IEA;ISO

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISO;ISS

GO:0046777 "protein autophosphorylation" evidence=ISO;ISS;IDA

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=ISO;ISS

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0051496 "positive regulation of stress fiber assembly" evidence=ISO;ISS

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=ISO;ISS

UNIPROTKB|F1SUK2 LOC100525766 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 498 (180.4 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 405

GO:0005911 "cell-cell junction" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0001726 "ruffle" evidence=ISS

GO:0005518 "collagen binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=ISS

GO:0051496 "positive regulation of stress fiber assembly" evidence=ISS

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISS

GO:0042060 "wound healing" evidence=ISS

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=ISS

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=ISS

GO:0031532 "actin cytoskeleton reorganization" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0043234 "protein complex" evidence=IEA

GO:0043113 "receptor clustering" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007528 "neuromuscular junction development" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F7AM77 PAK1 "Uncharacterized protein" [Equus caballus (taxid:9796)]

 Score = 498 (180.4 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   300 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 359

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   360 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 405

GO:0001726 "ruffle" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005518 "collagen binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005911 "cell-cell junction" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0031532 "actin cytoskeleton reorganization" evidence=ISS

GO:0033138 "positive regulation of peptidyl-serine phosphorylation" evidence=ISS

GO:0033148 "positive regulation of intracellular estrogen receptor signaling pathway" evidence=ISS

GO:0042060 "wound healing" evidence=ISS

GO:0043507 "positive regulation of JUN kinase activity" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0048754 "branching morphogenesis of an epithelial tube" evidence=ISS

GO:0051496 "positive regulation of stress fiber assembly" evidence=ISS

GO:0060244 "negative regulation of cell proliferation involved in contact inhibition" evidence=ISS

RGD|3251 Pak3 "p21 protein (Cdc42/Rac)-activated kinase 3" [Rattus norvegicus (taxid:10116)]

 Score = 495 (179.3 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
 Identities = 96/106 (90%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   299 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 358

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   359 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT 404

GO:0000165 "MAPK cascade" evidence=ISO

GO:0000187 "activation of MAPK activity" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA;ISO;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=TAS

GO:0007243 "intracellular protein kinase cascade" evidence=TAS

GO:0007409 "axonogenesis" evidence=IEA;ISO;ISS

GO:0016358 "dendrite development" evidence=IEA;ISO;ISS

GO:0017048 "Rho GTPase binding" evidence=IEA;ISO

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0030833 "regulation of actin filament polymerization" evidence=IEA;ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0051020 "GTPase binding" evidence=IDA

UNIPROTKB|Q62829 Pak3 "Serine/threonine-protein kinase PAK 3" [Rattus norvegicus (taxid:10116)]

 Score = 495 (179.3 bits), Expect = 5.3e-71, Sum P(2) = 5.3e-71
 Identities = 96/106 (90%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   299 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 358

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   359 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT 404

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

UNIPROTKB|E1B7J7 PAK3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 495 (179.3 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
 Identities = 96/106 (90%), Positives = 102/106 (96%)

Query:    26 ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
             + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct:   278 MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 337

Query:    86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct:   338 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT 383

GO:0030833 "regulation of actin filament polymerization" evidence=IEA

GO:0017048 "Rho GTPase binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007409 "axonogenesis" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.737
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	400
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-71
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-61
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-60
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-58
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-55
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-49
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-47
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-45
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-41
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-39
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-38
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-38
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	7e-37
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-36
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-35
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-33
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-31
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-30
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-30
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-29
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-29
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-28
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-27
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-26
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-26
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-25
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-25
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-23
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-23
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	5e-23
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	6e-23
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	9e-23
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-22
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-22
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-20
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-19
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-19
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-19
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-19
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-19
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	5e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-17
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-17
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-17
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-16
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-16
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-16
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-16
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-16
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-16
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	6e-16
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-16
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-16
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-15
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-15
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-15
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-15
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-15
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-15
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-14
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-14
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-14
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-14
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-14
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	9e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-13
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-13
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-13
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-12
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-12
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	2e-12
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-12
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	6e-12
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-11
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-11
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-11
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-11
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	5e-11
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-11
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-11
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	9e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-10
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-10
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-10
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-10
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-10
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-10
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-10
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-10
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-10
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-10
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-10
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-10
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	7e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	7e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	7e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-09
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-09
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	2e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-09
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	4e-09
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-09
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	5e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-09
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-09
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	7e-09
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-09
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	7e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	7e-09
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	8e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	8e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-08
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-08
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	6e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	7e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-07
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-07
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-07
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-07
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-07
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-07
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-07
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-07
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	7e-07
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	7e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	8e-07
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	9e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	1e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-06
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	1e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-06
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-06
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-06
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-06
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	3e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-06
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	3e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	5e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	8e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-05
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-05
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	3e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	5e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	6e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	6e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	8e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	9e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	9e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-04
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	5e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	6e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	7e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	0.001
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	0.001
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.001
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.001
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.001
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.002
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.002
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.002
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.003
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.003
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.003
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.004
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	0.004
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.004
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	0.004
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.004
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.004
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	0.004

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  225 bits (576), Expect = 2e-71
 Identities = 98/106 (92%), Positives = 102/106 (96%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENKHPNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 52  MNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 111

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct: 112 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 157

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  199 bits (507), Expect = 3e-61
 Identities = 97/108 (89%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  198 bits (503), Expect = 1e-60
 Identities = 96/108 (88%), Positives = 103/108 (95%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 52  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 111

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           MDEGQIAAVCRE LQAL+FLHSNQVIHRDIKSDNILLG+DGSVKL+ +
Sbjct: 112 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  190 bits (486), Expect = 4e-58
 Identities = 74/104 (71%), Positives = 88/104 (84%), Gaps = 2/104 (1%)

Query: 30  QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--CMD 87
           ++  KELIINEIL+M++ KHPNIV+Y DSYLVG+ELWVVMEY+ GGSLTD++T+    M+
Sbjct: 55  RKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMN 114

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E QIA VCREVLQ LE+LHS  VIHRDIKSDNILL  DGSVKL+
Sbjct: 115 EPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLA 158

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  183 bits (466), Expect = 4e-55
 Identities = 92/131 (70%), Positives = 110/131 (83%)

Query: 3   RGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG 62
           +G +   F++ D     ++    I L +QPKKELIINEILVM+E K+PNIVN+LDS+LVG
Sbjct: 29  QGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG 88

Query: 63  EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +EL+VVMEYL GGSLTDVVTETCMDE QIAAVCRE LQALEFLH+NQVIHRDIKSDN+LL
Sbjct: 89  DELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL 148

Query: 123 GLDGSVKLSKW 133
           G+DGSVKL+ +
Sbjct: 149 GMDGSVKLTDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  168 bits (427), Expect = 2e-49
 Identities = 66/104 (63%), Positives = 83/104 (79%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD 87
           L +Q ++EL+ NE+++MR+ +HPNIV    SYLVG+ELWVVME+L GG+LTD+VT T M+
Sbjct: 54  LRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMN 113

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E QIA VC  VL+AL FLH+  VIHRDIKSD+ILL  DG VKLS
Sbjct: 114 EEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLS 157

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  161 bits (410), Expect = 3e-47
 Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 2/108 (1%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I L  + KKE IINEI ++++ KHPNIV Y  SYL  +ELW+VME+  GGSL D++  T 
Sbjct: 33  IKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN 92

Query: 86  --MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             + E QIA VC+E+L+ LE+LHSN +IHRDIK+ NILL  DG VKL 
Sbjct: 93  QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLI 140

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  156 bits (396), Expect = 8e-45
 Identities = 116/279 (41%), Positives = 144/279 (51%), Gaps = 55/279 (19%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ASGTVYTAI+ +TG E           PKKELIINEILVMRENK+PNIVNYLDSYLVG+E
Sbjct: 31  ASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 90

Query: 208 LWNIVNYLDSYLVGEELWYTKPIEEP----------------------SNTTDEKTSTSS 245
           LW ++     YL G  L  T  + E                       SN    +   S 
Sbjct: 91  LWVVM----EYLAGGSL--TDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSD 144

Query: 246 A------SPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS 299
                    +            P    RST+ G    + P VV  K          L   
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204

Query: 300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLE 359
            +E +       +P    PYL     R ALYLIATN  PE++  E+LS +F+DFL++CLE
Sbjct: 205 AIEMV-----EGEP----PYLNENPLR-ALYLIATNGTPELQNPERLSAVFRDFLNRCLE 254

Query: 360 EEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK 398
            +V+ R SA  LL+HPFLK+A+PL+SLTPLI+AAKEA K
Sbjct: 255 MDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIK 293

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  146 bits (368), Expect = 8e-41
 Identities = 110/276 (39%), Positives = 142/276 (51%), Gaps = 45/276 (16%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ASGTV+TAI+ +TG E           PKKELIINEILVM+E K+PNIVN+LDS+LVG+E
Sbjct: 31  ASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDE 90

Query: 208 LWNIVNYL-----------------------DSYLVGEELWYTKPIEEPSNTTDEKTSTS 244
           L+ ++ YL                          L   E  +   +      +D      
Sbjct: 91  LFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM 150

Query: 245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL 304
             S +            P    RST+ G    + P VV  K          L    +E +
Sbjct: 151 DGS-VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV 209

Query: 305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
                  +P    PYL     R ALYLIATN  PE++  EKLS IF+DFL++CLE +VE 
Sbjct: 210 -----EGEP----PYLNENPLR-ALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEK 259

Query: 365 RASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 400
           R SA  LL+HPFLK+A+PL+SLTPLI+AAKEA K +
Sbjct: 260 RGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKSN 295

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  141 bits (356), Expect = 5e-39
 Identities = 64/104 (61%), Positives = 84/104 (80%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD 87
           L +Q ++EL+ NE+++MR+ +H N+V    SYLVGEELWV+ME+L GG+LTD+V++T ++
Sbjct: 56  LRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLN 115

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E QIA VC  VLQAL +LHS  VIHRDIKSD+ILL LDG VKLS
Sbjct: 116 EEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLS 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  139 bits (352), Expect = 2e-38
 Identities = 110/276 (39%), Positives = 137/276 (49%), Gaps = 45/276 (16%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDS------ 201
           ASGTVYTA++ +TG E           PKKELIINEILVMRENK+PNIVNYLDS      
Sbjct: 32  ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91

Query: 202 ------YLVGEELWNIVN-----------YLDSYLVGEELWYTKPIEEPSNTTDEKTSTS 244
                 YL G  L ++V                 L   E  ++  +      +D      
Sbjct: 92  LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151

Query: 245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL 304
             S +            P    RST+ G    + P VV  K          L    +E +
Sbjct: 152 DGS-VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

Query: 305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
                  +P    PYL     R ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE 
Sbjct: 211 -----EGEP----PYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEK 260

Query: 365 RASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 400
           R SA  LL+H FLKIA+PL+SLTPLI AAKEA K +
Sbjct: 261 RGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  137 bits (346), Expect = 9e-38
 Identities = 58/120 (48%), Positives = 71/120 (59%), Gaps = 15/120 (12%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIA 92
           E+I  EI +++E +HPNIV Y  SYL  ++LW+VMEY  GGSL D+  VT   + E QIA
Sbjct: 45  EIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIA 104

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL-------------SKWNRFIAT 139
            VCRE L+ L +LH    IHRDIK  NILL  DG VKL             +K   FI T
Sbjct: 105 YVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGT 164

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score =  135 bits (341), Expect = 7e-37
 Identities = 64/106 (60%), Positives = 84/106 (79%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD 87
           L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T M+
Sbjct: 55  LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN 114

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           E QIAAVC  VL+AL  LH+  VIHRDIKSD+ILL  DG VKLS +
Sbjct: 115 EEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  134 bits (337), Expect = 3e-36
 Identities = 62/106 (58%), Positives = 84/106 (79%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD 87
           L +Q ++EL+ NE+++MR+  H N+V+  +SYLVG+ELWVVME+L GG+LTD+VT T M+
Sbjct: 57  LRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN 116

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           E QIA VC  VL+AL +LH+  VIHRDIKSD+ILL  DG +KLS +
Sbjct: 117 EEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  129 bits (326), Expect = 6e-35
 Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 1/100 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQI 91
            +E I+ EI ++++ KHPNIV   D +   ++L++VMEY  GG L D++ +   + E + 
Sbjct: 40  DRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEA 99

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               R++L ALE+LHS  ++HRD+K +NILL  DG VKL+
Sbjct: 100 RFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLA 139

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  125 bits (316), Expect = 2e-33
 Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 4/98 (4%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV----VTETCMDEGQIA 92
           +  E+  M +  HPN+V Y  S++VG+ELW+VM YL GGSL D+         +DE  IA
Sbjct: 46  LRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIA 105

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            V +EVL+ LE+LHSN  IHRDIK+ NILLG DGSVK+
Sbjct: 106 TVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKI 143

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  119 bits (300), Expect = 3e-31
 Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQI 91
           K +    EI ++R   HPNIV  +D++   + L++VMEY  GG L D +     + E + 
Sbjct: 41  KDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEA 100

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  ++L+ LE+LHSN +IHRD+K +NILL  +G VK++
Sbjct: 101 KKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIA 140

Length = 260

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  117 bits (295), Expect = 2e-30
 Identities = 45/96 (46%), Positives = 59/96 (61%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E I  EI  + + + P I  Y  S+L G +LW++MEY  GGS  D++    +DE  IA +
Sbjct: 44  EDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFI 103

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            REVL  LE+LH    IHRDIK+ NILL  +G VKL
Sbjct: 104 LREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKL 139

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  117 bits (295), Expect = 3e-30
 Identities = 50/72 (69%), Positives = 60/72 (83%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+HPFLKIA+PL+SL
Sbjct: 222 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSL 281

Query: 387 TPLIMAAKEAAK 398
           TPLI AAKEA K
Sbjct: 282 TPLIAAAKEATK 293

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  114 bits (287), Expect = 2e-29
 Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
           II EI ++++   P IV Y  SY    +LW+VMEY   GS++D++  T   + E +IAA+
Sbjct: 45  IIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAI 104

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             + L+ LE+LHSN+ IHRDIK+ NILL  +G  KL
Sbjct: 105 LYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKL 140

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  111 bits (281), Expect = 5e-29
 Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 3/102 (2%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQ 90
             E ++ EI ++++  HPNIV     +     L++VMEY  GGSL D++ E    + E +
Sbjct: 34  LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDE 93

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLS 131
           I  +  ++L+ LE+LHSN +IHRD+K +NILL   +G VKL+
Sbjct: 94  ILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLA 135

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  112 bits (282), Expect = 1e-28
 Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 2/94 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCRE 97
           EI ++ E KHPNIV   ++Y    +LW+++E+  GG+L  ++   E  + E QI  VCR+
Sbjct: 52  EIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQ 111

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +L+AL FLHS++VIHRD+K+ NILL LDG VKL+
Sbjct: 112 MLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLA 145

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  109 bits (274), Expect = 2e-27
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 21/156 (13%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVV 81
           + L+   ++EL  +  EI ++   +HPNIV Y  S    E+  L + +EY+ GGSL+ ++
Sbjct: 33  VELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL 92

Query: 82  -TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL-----SKWNR 135
                + E  I    R++L+ L +LHSN ++HRDIK  NIL+  DG VKL     +K   
Sbjct: 93  KKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKR-- 150

Query: 136 FIATKLYIEISKVII---YCWDWTA--VASGTVYTA 166
            +      E +  +    Y   W A  V  G  Y  
Sbjct: 151 -LGDIETGEGTGSVRGTPY---WMAPEVIRGEEYGR 182

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  106 bits (266), Expect = 3e-26
 Identities = 48/68 (70%), Positives = 53/68 (77%), Gaps = 11/68 (16%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ASGTVYTAI+ +TG E           PKKELIINEILVMRENKHPNIVNYLDSYLVG+E
Sbjct: 31  ASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDE 90

Query: 208 LWNIVNYL 215
           LW ++ YL
Sbjct: 91  LWVVMEYL 98

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  105 bits (264), Expect = 5e-26
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 12/110 (10%)

Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYL------VGEELWVVMEYLPGGSLTDVVTET- 84
           ++E I  E  ++R+ + HPNI  +  +++        ++LW+VME   GGS+TD+V    
Sbjct: 45  EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLR 104

Query: 85  ----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                + E  IA + RE L+ L +LH N+VIHRDIK  NILL  +  VKL
Sbjct: 105 KKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKL 154

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score =  103 bits (258), Expect = 2e-25
 Identities = 59/123 (47%), Positives = 74/123 (60%), Gaps = 3/123 (2%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I L       LI  EI +++E KH NIV Y  SYL  E+LW+ MEY  GGSL D+   T 
Sbjct: 42  IKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG 101

Query: 86  -MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
            + E QIA VCRE LQ L +LHS   +HRDIK  NILL  +G VKL+ +   +A K+   
Sbjct: 102 PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFG--VAAKITAT 159

Query: 145 ISK 147
           I+K
Sbjct: 160 IAK 162

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  102 bits (257), Expect = 4e-25
 Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 5/119 (4%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-T 82
           I+L +  ++ L  I+ EI +++  KHPNIV Y+ S    + L++++EY   GSL  ++  
Sbjct: 33  ISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK 92

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL 141
                E  +A    +VLQ L +LH   VIHRDIK+ NIL   DG VKL+ +   +ATKL
Sbjct: 93  FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFG--VATKL 149

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 98.6 bits (245), Expect = 1e-23
 Identities = 48/100 (48%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
            ++  EI++M++ KH NIV Y  SYL  ++LW+ ME+  GGSL D+   T  + E QIA 
Sbjct: 51  AVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAY 110

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           V RE LQ L +LHS   +HRDIK  NILL  +G VKL+ +
Sbjct: 111 VSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADF 150

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 98.7 bits (246), Expect = 2e-23
 Identities = 40/87 (45%), Positives = 58/87 (66%)

Query: 44  MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALE 103
           +R+++ PNI  Y  SYL G  LW++MEY  GGS+  ++    + E  I+ + REVL AL+
Sbjct: 56  LRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALK 115

Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++H   VIHRDIK+ NIL+   G+VKL
Sbjct: 116 YIHKVGVIHRDIKAANILVTNTGNVKL 142

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 97.5 bits (242), Expect = 5e-23
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 13/172 (7%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E I  EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE QIA +
Sbjct: 47  EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI 106

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKL 141
            RE+L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  
Sbjct: 107 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 166

Query: 142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
           ++    +    +D  A       TAIE + G  P  EL   ++L +    +P
Sbjct: 167 WMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP 218

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 97.0 bits (241), Expect = 6e-23
 Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 13/172 (7%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E I  EI V+ +   P I  Y  SYL G +LW++MEYL GGS  D++    ++E  IA +
Sbjct: 47  EDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATI 106

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKL 141
            RE+L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  
Sbjct: 107 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 166

Query: 142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
           ++    +    +D+ A       TAIE + G  P  +L    +L +     P
Sbjct: 167 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP 218

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 97.4 bits (243), Expect = 9e-23
 Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 5/111 (4%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
           I L    K++L  +  EI+  R+ +HPNI+ Y+ S++V  EL+VV   +  GS  D++  
Sbjct: 33  INLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT 92

Query: 84  TCMD---EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +   E  IA + ++VL AL+++HS   IHR +K+ +ILL  DG V LS
Sbjct: 93  HFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS 143

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQI 91
            ++ ++ E+  +R  + P +V    ++    E+ +V+EY+ GGSL D++ +   + E  +
Sbjct: 42  FRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVL 101

Query: 92  AAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLS 131
           A + R++L+ L++LH+   +IHRDIK  N+L+   G VK++
Sbjct: 102 AYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIA 142

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 95.5 bits (237), Expect = 2e-22
 Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E I  EI V+ +   P +  Y  SYL G +LW++MEYL GGS  D++     DE QIA +
Sbjct: 47  EDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATM 106

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKL 141
            +E+L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  
Sbjct: 107 LKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 166

Query: 142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKEL 179
           ++    +    +D  A       TAIE + G  P  ++
Sbjct: 167 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 91.4 bits (227), Expect = 1e-20
 Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 12/120 (10%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDE 88
             K + II E+  +++ +HPN + Y   YL     W+VMEY  G S +D+  V +  + E
Sbjct: 56  NEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQE 114

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIAT 139
            +IAA+C   LQ L +LHS++ IHRDIK+ NILL   G+VKL+ +         N F+ T
Sbjct: 115 VEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGT 174

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 90.3 bits (225), Expect = 1e-20
 Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 5/105 (4%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD--- 87
           + ++E  +NE+ ++++  HPNI+ Y +S+    +L +VMEY  GG L+  + +   +   
Sbjct: 40  EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKP 99

Query: 88  --EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             E QI     ++  AL++LHS +++HRDIK  NI L  +G VKL
Sbjct: 100 FPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKL 144

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 87.1 bits (216), Expect = 1e-19
 Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 7/127 (5%)

Query: 10  FSSDDRRFF----SKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL 65
            + DD  FF      +  +  T  Q+  K+L   EI ++ + +HPNIV YL +    + L
Sbjct: 20  LNLDDGDFFAVKEVSLADDGQT-GQEAVKQLE-QEIALLSKLQHPNIVQYLGTEREEDNL 77

Query: 66  WVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL 124
           ++ +E +PGGSL  ++ +     E  I    R++L  LE+LH    +HRDIK  NIL+  
Sbjct: 78  YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT 137

Query: 125 DGSVKLS 131
           +G VKL+
Sbjct: 138 NGVVKLA 144

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 87.0 bits (216), Expect = 2e-19
 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 30  QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDE 88
                + I +E+ V+   KHPN+V Y    +  E++++ MEY  GG+L +++     +DE
Sbjct: 39  DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDE 98

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             I     ++L+ L +LHS+ ++HRDIK  NI L  +G +KL 
Sbjct: 99  HVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLG 141

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 86.8 bits (216), Expect = 2e-19
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETCM 86
           A + ++E  + E  +M++  HPNIV  L     GE L++V EY+PGG L D        +
Sbjct: 40  ASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKL 99

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +  +  ++ + +E+L S   +HRD+ + N L+  +  VK+S
Sbjct: 100 TLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKIS 144

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 86.8 bits (216), Expect = 2e-19
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L    +  Q    E  + E  +MR+  HPNIV  L      E L +VMEY+PGG L D
Sbjct: 34  KTLKEDASEQQ---IEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLD 90

Query: 80  VV---TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +       +    + +   ++ + +E+L S   IHRD+ + N L+G +  VK+S
Sbjct: 91  YLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKIS 145

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 86.5 bits (215), Expect = 3e-19
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 10/68 (14%)

Query: 159 ASGTVYTAIESSTGME----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEEL 208
           ASG VY A + +TG E            KELIINEIL+M++ KHPNIV+Y DSYLVG+EL
Sbjct: 31  ASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDEL 90

Query: 209 WNIVNYLD 216
           W ++ Y+D
Sbjct: 91  WVVMEYMD 98

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 86.6 bits (214), Expect = 3e-19
 Identities = 40/96 (41%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCRE 97
           EI ++    HPNIV  LD++     LW+++E+  GG++  V+ E    + E QI  VC++
Sbjct: 52  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQ 111

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            L+AL +LH N++IHRD+K+ NIL  LDG +KL+ +
Sbjct: 112 TLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADF 147

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 86.0 bits (214), Expect = 3e-19
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L    +  Q    E  + E  +MR+  HPN+V  L      E L++VMEY+ GG L  
Sbjct: 34  KTLKEDASEQQ---IEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLS 90

Query: 80  VV--TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +      +    + +   ++ + +E+L S   IHRD+ + N L+G +  VK+S
Sbjct: 91  YLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKIS 144

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 32/64 (50%), Positives = 41/64 (64%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +AL+LI T   P +K  EK S  F+DFL++CL ++ E R SA  LL+HPFLK A P    
Sbjct: 223 RALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEF 282

Query: 387 TPLI 390
            PLI
Sbjct: 283 APLI 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 85.9 bits (212), Expect = 8e-19
 Identities = 38/94 (40%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCRE 97
           EI ++    HP IV  L ++    +LW+++E+ PGG++  ++ E    + E QI  +CR+
Sbjct: 59  EIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQ 118

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +L+AL++LHS ++IHRD+K+ N+LL LDG +KL+
Sbjct: 119 MLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLA 152

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 43/265 (16%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ++G V  A E  TG +            ++EL+ NE+++MR+  H N+V+  +SYLVG+E
Sbjct: 34  STGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDE 93

Query: 208 LWNIVNYLDSYLVGEELWYTKPIEEPSNTT-------------------DEKTST---SS 245
           LW ++ +L+   + + + +T+  EE   T                    D K+ +   +S
Sbjct: 94  LWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS 153

Query: 246 ASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG 305
              +               P R +L G    + P V+             L   ++E + 
Sbjct: 154 DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 213

Query: 306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR 365
                  P+F  P L      QA+  I  N  P +K+  K+S + + FLD  L  E   R
Sbjct: 214 GEP----PYFNEPPL------QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQR 263

Query: 366 ASASLLLKHPFLKIARPLASLTPLI 390
           A+A  LL+HPFLK+A P + + PL+
Sbjct: 264 ATAQELLQHPFLKLAGPPSCIVPLM 288

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 83.0 bits (205), Expect = 5e-18
 Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREV 98
           EI +++E +H NIV YL S L  + L + +EY+PGGS+  ++      +E  +    R++
Sbjct: 56  EIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQI 115

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           L+ L +LH+  +IHRDIK  NIL+   G +K+S
Sbjct: 116 LKGLNYLHNRGIIHRDIKGANILVDNKGGIKIS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 82.1 bits (204), Expect = 1e-17
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-----VTETCMDEGQIA 92
           + EI +++E KHPNIV  LD      +L++V EY       D+          +    I 
Sbjct: 46  LREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLIK 101

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++  ++L+ L + HS++++HRD+K  NIL+  DG +KL
Sbjct: 102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKL 139

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 81.4 bits (202), Expect = 1e-17
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-T 82
           KK+ II          E  ++    HP IV    ++   E+L++V+EY PGG L   +  
Sbjct: 27  KKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK 86

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E    E +      E++ ALE+LHS  +I+RD+K +NILL  DG +KL+
Sbjct: 87  EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLT 135

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 10/113 (8%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------- 81
           A + +++  + E  VM++  HPN+V  L      E L++V+EY+ GG L D +       
Sbjct: 35  ASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVF 94

Query: 82  ---TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               ++ +    + +   ++ + +E+L S + +HRD+ + N L+G D  VK+S
Sbjct: 95  PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKIS 147

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 3/93 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCRE 97
           EI  ++  +HP +V  LD +  G    +VMEY+P   L++V+   E  + E Q+ +  R 
Sbjct: 49  EIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPS-DLSEVLRDEERPLPEAQVKSYMRM 107

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +L+ + ++H+N ++HRD+K  N+L+  DG +K+
Sbjct: 108 LLKGVAYMHANGIMHRDLKPANLLISADGVLKI 140

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 79.9 bits (197), Expect = 6e-17
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI +++  +H  IV Y       E L + MEY+PGGS+ D +     + E       R+
Sbjct: 53  CEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQ 112

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +L+ +E+LHSN ++HRDIK  NIL    G+VKL
Sbjct: 113 ILEGVEYLHSNMIVHRDIKGANILRDSAGNVKL 145

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 79.3 bits (195), Expect = 1e-16
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 32/175 (18%)

Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLV------GEELWVVMEYLPGGSLTDVVTE 83
           + ++E I  EI ++++ + H NI  Y  +++        ++LW+VME+   GS+TD+V  
Sbjct: 53  EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKN 112

Query: 84  T---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL---------- 130
           T    + E  IA +CRE+L+ L  LH+++VIHRDIK  N+LL  +  VKL          
Sbjct: 113 TKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172

Query: 131 ---SKWNRFIATKLYIEISKVIIYC-------WDWTAVASGTVYTAIESSTGMEP 175
               + N FI T  +  ++  +I C       +D+ +       TAIE + G  P
Sbjct: 173 RTVGRRNTFIGTPYW--MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 225

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 20  KILSNPITLAQQPKKELIINEILVM-RENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT 78
           KIL     L ++ K + +  E  V+ R N HP I+    ++   E L+ V+EY P G L 
Sbjct: 32  KILDK-RQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELL 90

Query: 79  DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             + +   +DE        E+L ALE+LHS  +IHRD+K +NILL  D  +K+
Sbjct: 91  QYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKI 143

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 78.4 bits (194), Expect = 2e-16
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGSLTDVV-----TETC 85
           +K+ +++E+ ++RE KHPNIV Y D  +    + L++VMEY  GG L  ++         
Sbjct: 42  EKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKY 101

Query: 86  MDEGQIAAVCREVLQALEFLH-----SNQVIHRDIKSDNILLGLDGSVKL 130
           ++E  I  +  ++L AL   H      N V+HRD+K  NI L  + +VKL
Sbjct: 102 IEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 77.9 bits (192), Expect = 2e-16
 Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 5/105 (4%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----TETC 85
           Q ++E  +NEI ++    HPNI++Y +++L G +L +VMEY P G L+  +         
Sbjct: 40  QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKL 99

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           + E +I  +  ++L+ L+ LH  +++HRD+KS NILL  +  VK+
Sbjct: 100 IPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKI 144

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 3/99 (3%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQI 91
           K+  + E+ V+R+ +H NIVN  +++     L++V EY+   +L +++      +    +
Sbjct: 44  KKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAV 102

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +   ++LQA+ + HS+ +IHRDIK +NIL+   G +KL
Sbjct: 103 RSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 76.8 bits (189), Expect = 5e-16
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)

Query: 20  KILSNPITLAQQPKKE--LIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
            ++   I + Q  K E     NE  V++   HPNI+ Y +++L  + L +VMEY PGG+L
Sbjct: 27  LVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTL 86

Query: 78  TDVVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + + + C   +DE  I     ++L AL  +H+  ++HRD+K+ NILL
Sbjct: 87  AEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILL 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 78.6 bits (192), Expect = 5e-16
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 13  DDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEY 71
           D +    K+L+  +   +  + E  + EI ++   N  PNIV   D +     L++VMEY
Sbjct: 21  DRKLVALKVLAKKLES-KSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79

Query: 72  LPGGSLTDVV----TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           + GGSL D++     +  + E +   +  ++L ALE+LHS  +IHRDIK +NILL  DG 
Sbjct: 80  VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR 139

Query: 128 -VKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKK 177
            VKL     F   KL  +           +       Y A E   G+    
Sbjct: 140 VVKLID---FGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187

Length = 384

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 77.8 bits (191), Expect = 6e-16
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 12/118 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           II E+  +++ KHPN + Y   YL     W+VMEY  G S +D+  V +  + E +IAA+
Sbjct: 68  IIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI 126

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIATKLYI 143
               LQ L +LHS+ +IHRDIK+ NILL   G VKL+ +         N F+ T  ++
Sbjct: 127 THGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWM 184

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 76.3 bits (188), Expect = 8e-16
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET---CMD 87
           + ++   +NEI+++   +HPNI+ Y + ++    L + MEY  GG+L D +        +
Sbjct: 40  EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFE 99

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS 146
           E  +     +++ A+ ++H   ++HRDIK+ NI L   G +KL  +   I+  L  E S
Sbjct: 100 EEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFG--ISKILGSEYS 156

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 76.4 bits (188), Expect = 9e-16
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET----CM 86
           QP  E    EI +    KH NIV YL S        + ME +PGGSL+ ++         
Sbjct: 50  QPLHE----EIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKD 105

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLS 131
           +E  I    +++L+ L++LH NQ++HRDIK DN+L+    G VK+S
Sbjct: 106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKIS 151

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 76.8 bits (190), Expect = 1e-15
 Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD--EGQIAAVC 95
           + EI +++E KHPNI+  LD +     + +V E++    L  V+ +  +      I +  
Sbjct: 50  LREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMET-DLEKVIKDKSIVLTPADIKSYM 108

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              L+ LE+LHSN ++HRD+K +N+L+  DG +KL
Sbjct: 109 LMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKL 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           I+ E+ ++ +   P IV +  ++    ++ + MEY+ GGSL  +    +  + E  +  +
Sbjct: 46  ILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKI 105

Query: 95  CREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL 130
              VL+ L +LH   ++IHRD+K  NIL+   G +KL
Sbjct: 106 AVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKL 142

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 75.1 bits (184), Expect = 2e-15
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 32/173 (18%)

Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYL------VGEELWVVMEYLPGGSLTDVVTET- 84
           ++E I  EI ++++ + H NI  Y  +++      + ++LW+VME+   GS+TD++  T 
Sbjct: 45  EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 104

Query: 85  --CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL------------ 130
              + E  IA +CRE+L+ L  LH ++VIHRDIK  N+LL  +  VKL            
Sbjct: 105 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164

Query: 131 -SKWNRFIATKLYIEISKVIIYC-------WDWTAVASGTVYTAIESSTGMEP 175
             + N FI T  +  ++  +I C       +D+ +       TAIE + G  P
Sbjct: 165 VGRRNTFIGTPYW--MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 215

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 74.7 bits (184), Expect = 3e-15
 Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 3/106 (2%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVC 95
           ++NE  +++E  HP +VN   S+   E +++V++ L GG L   +  +    E Q+    
Sbjct: 47  VLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWI 106

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL 141
            E++ ALE+LHS  +IHRDIK DNILL   G V ++ +N  IATK+
Sbjct: 107 CEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFN--IATKV 150

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 9/108 (8%)

Query: 32  PKKELI----INEILVMRE----NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-T 82
            K ++I    ++++L  R+     + P +V    S+   + L++VMEYLPGG L  ++  
Sbjct: 27  KKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN 86

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              +DE        E++ ALE+LHSN +IHRD+K DNIL+  +G +KL
Sbjct: 87  VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKL 134

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 74.9 bits (185), Expect = 4e-15
 Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 7/100 (7%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQI-- 91
           E ++NE  +++  +HP +VN   S+     L++VMEY+PGG L + +       E     
Sbjct: 46  EHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARF 105

Query: 92  -AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            AA   +V+ ALE+LHS  +++RD+K +N+LL  DG +K+
Sbjct: 106 YAA---QVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKI 142

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 74.4 bits (183), Expect = 4e-15
 Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-TETCMD 87
            Q+   + + +EI  +++  H NIV YL      E L + +EY+PGGS+   + T    +
Sbjct: 47  RQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFE 106

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E  +     +VL+ L +LHS  ++HRD+K+DN+L+  DG  K+S
Sbjct: 107 EQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKIS 150

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 74.0 bits (181), Expect = 1e-14
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 12/118 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           II E+  ++  KHPN + Y   YL     W+VMEY  G S +D+  V +  + E +IAA+
Sbjct: 72  IIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI 130

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIATKLYI 143
               LQ L +LHS+ +IHRDIK+ NILL   G VKL+ +         N F+ T  ++
Sbjct: 131 THGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWM 188

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           ++   + ++E  I+E  V+ +     I+ Y +S+L   +L +VMEY   G L  ++    
Sbjct: 35  LSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQR 94

Query: 86  ---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              + E Q+     ++L  L  LHS +++HRDIKS N+ L    +VK+
Sbjct: 95  GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKI 142

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 12/118 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           II E+  +++ +HPN + Y   YL     W+VMEY  G S +D+  V +  + E +IAAV
Sbjct: 62  IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAV 120

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIATKLYI 143
               LQ L +LHS+ +IHRD+K+ NILL   G VKL  +         N F+ T  ++
Sbjct: 121 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWM 178

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           K++ + EI ++++ KHPN+VN ++ +    +L +V EY     L ++      + E  I 
Sbjct: 44  KKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  + LQA+ F H +  IHRD+K +NIL+   G +KL
Sbjct: 104 KIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-----ETCMDEGQIA 92
           + EI ++++  HPN++ YL S++   EL +V+E    G L+ ++      +  + E  I 
Sbjct: 50  LKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIW 109

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK--WNRFIATKLYIEISKV 148
               ++  ALE +HS +++HRDIK  N+ +   G VKL      RF ++K     S V
Sbjct: 110 KYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV 167

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 72.0 bits (176), Expect = 4e-14
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 10/92 (10%)

Query: 49  HPNIVNYLDSYL-----VGEELWVVMEYLPGGSLTDVVTETC-----MDEGQIAAVCREV 98
           HPN+V +   Y       G++LW+V+E   GGS+TD+V         M+E  IA +  E 
Sbjct: 74  HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L  L+ LH N+ IHRD+K +NILL  +G VKL
Sbjct: 134 LMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL 165

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 71.1 bits (175), Expect = 5e-14
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 5   VTIDRFSSDDRRFFSKILS-NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE 63
           V + +  S +R F  K +    I    Q +   I +E  ++ E  HP IV    ++   +
Sbjct: 9   VELVKVKSKNRTFALKCVKKRHIVETGQQEH--IFSEKEILEECNHPFIVKLYRTFKDKK 66

Query: 64  ELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            ++++MEY  GG L  ++ +    DE         V+ A E+LH+  +I+RD+K +N+LL
Sbjct: 67  YIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL 126

Query: 123 GLDGSVKL 130
             +G VKL
Sbjct: 127 DSNGYVKL 134

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 70.9 bits (174), Expect = 8e-14
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           I+ E+ + +  K P IV Y  ++L      + + MEY  GGSL  +  +     G+I   
Sbjct: 46  ILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEK 105

Query: 94  ----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               +   VL+ L +LHS ++IHRDIK  NILL   G VKL
Sbjct: 106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKL 146

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 70.8 bits (173), Expect = 9e-14
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 10/92 (10%)

Query: 49  HPNIVN-----YLDSYLVGEELWVVMEYLPGGSLTDVVTETC-----MDEGQIAAVCREV 98
           HPN+V      Y    LVG +LW+V+E   GGS+T++V         +DE  I+ +    
Sbjct: 78  HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGA 137

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L  L+ LH+N++IHRD+K +NILL  +G VKL
Sbjct: 138 LLGLQHLHNNRIIHRDVKGNNILLTTEGGVKL 169

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 68.8 bits (168), Expect = 3e-13
 Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCM 86
           LA + + E +  E+ +++  KH NIV YL + L    + + ME++PGGS++ ++     +
Sbjct: 40  LAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPL 99

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            E       +++L  + +LH+N V+HRDIK +N++L  +G +KL
Sbjct: 100 PEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKL 143

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-- 83
           I+     ++E    E+ V+   KHPNIV Y +S+     L++VM+Y  GG L   +    
Sbjct: 35  ISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQR 94

Query: 84  -TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                E QI     ++  AL+ +H  +++HRDIKS NI L  DG++KL
Sbjct: 95  GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKL 142

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
           I  EI ++R+  HPN+V   D +    E+ V++E++ GGSL         DE  +A V R
Sbjct: 119 ICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG---THIADEQFLADVAR 175

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++L  + +LH   ++HRDIK  N+L+    +VK++
Sbjct: 176 QILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIA 210

Length = 353

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 68.7 bits (169), Expect = 4e-13
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 39  NEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEGQIAAV 94
            E+  +R+ N+HPNIV   + +   +EL+ V EY+ G +L  ++ +       E  I ++
Sbjct: 46  REVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSI 104

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             ++LQ L  +H +   HRD+K +N+L+     VK+
Sbjct: 105 IYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKI 140

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 68.7 bits (169), Expect = 5e-13
 Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 7/98 (7%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE---LWVVMEYLPGGSLTDVVTETCM--DEGQIA 92
           I EI ++++ +HPNIV  L   +  +    +++V EY+    LT ++    +   E QI 
Sbjct: 46  IREIKLLQKLRHPNIVR-LKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              +++L+ L++LHSN ++HRDIK  NIL+  DG +KL
Sbjct: 104 CYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKL 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 68.4 bits (167), Expect = 6e-13
 Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 30  QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDE 88
           Q+   E +  EI +M    HP+I+  L +        + +E++ GGS++ ++++     E
Sbjct: 43  QEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE 102

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
             I     ++L+ L +LH NQ+IHRD+K  N+L+
Sbjct: 103 AVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI 136

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 10/89 (11%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----TDVVTETCMDEGQIAAVCREVLQAL 102
           +HP +VN    +   + +  VMEY  GG L     TDV +E         A C  V+  L
Sbjct: 60  RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEP---RAVFYAAC--VVLGL 114

Query: 103 EFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++LH N++++RD+K DN+LL  +G VK++
Sbjct: 115 QYLHENKIVYRDLKLDNLLLDTEGFVKIA 143

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 376
           AL+ IATN  P ++  EK S  F+DFL +CL++  E R +A  LLKHPF
Sbjct: 205 ALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD---EGQIAAVCR 96
           E+ V +   HPNIV Y  +++   ELWVV  ++  GS  D++    MD   E  IA + +
Sbjct: 49  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQ 108

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            VL+AL+++H    +HR +K+ +IL+ +DG V LS
Sbjct: 109 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 143

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 66.5 bits (162), Expect = 2e-12
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 5/108 (4%)

Query: 26  ITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
           I L + P  +KE    E++++ + KHPNIV +  S+     L++VMEY  GG L   +  
Sbjct: 33  IDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINR 92

Query: 84  ---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
                  E QI +   ++   L+ +H  +++HRDIKS NI L  +G V
Sbjct: 93  QRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMV 140

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 4e-12
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-----TCMDEGQIA 92
           + EI +++E  HPNI+  LD +    +L++V E++     TD+          + E  I 
Sbjct: 46  LREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM----DTDLYKLIKDRQRGLPESLIK 101

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +   ++LQ L F HS+ ++HRD+K +N+L+  +G +KL
Sbjct: 102 SYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKL 139

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 32/98 (32%), Positives = 61/98 (62%), Gaps = 1/98 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VTETCMDEGQIA 92
           K++ + EI ++++ +H N+VN ++ +   + L++V E++    L D+      +DE ++ 
Sbjct: 44  KKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVR 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               ++L+ +EF HS+ +IHRDIK +NIL+   G VKL
Sbjct: 104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 65.0 bits (159), Expect = 7e-12
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 10/104 (9%)

Query: 37  IINEILVMRENK---HPNIVNYLD----SYLVGE-ELWVVMEYLPG--GSLTDVVTETCM 86
            + EI ++++ +   HPNIV  LD         E +L +V E++     +      +  +
Sbjct: 45  TLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGL 104

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               I  + R++L+ ++FLHS++++HRD+K  NIL+  DG VK+
Sbjct: 105 PPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKI 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL 372
           P+F  P L      QA+  I  N  P++K   K+S   + FLD+ L  +   RA+A+ LL
Sbjct: 214 PYFNEPPL------QAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELL 267

Query: 373 KHPFLKIARPLASLTPLI 390
            HPFL  A P +S+ PL+
Sbjct: 268 NHPFLAKAGPPSSIVPLM 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----TETCMDEGQIA 92
           + EI ++++  HPN++ YLDS++   EL +V+E    G L+ ++      +  + E  + 
Sbjct: 50  VKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVW 109

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK--WNRFIATK 140
               ++  A+E +HS +V+HRDIK  N+ +   G VKL      RF ++K
Sbjct: 110 KYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 65.9 bits (160), Expect = 1e-11
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 17/110 (15%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETC 85
           L ++ K +L+I E+ VMRE KH NIV Y+D +L    ++L+++ME+   G L+  + + C
Sbjct: 51  LKEREKSQLVI-EVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNI-QKC 108

Query: 86  ------MDEGQIAAVCREVLQALEFLHS-------NQVIHRDIKSDNILL 122
                 ++E  I  + R++L AL + H+        +V+HRD+K  NI L
Sbjct: 109 YKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158

Length = 1021

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 63.7 bits (155), Expect = 2e-11
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    + +    I +  
Sbjct: 47  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYL 106

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+
Sbjct: 107 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA 142

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLH 106
           KHP +      +   + L+ VMEY+ GG L   +      DE +      EV  AL FLH
Sbjct: 54  KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLH 113

Query: 107 SNQVIHRDIKSDNILLGLDGSVKLS 131
            + VI+RD+K DNILL  +G  KL+
Sbjct: 114 RHGVIYRDLKLDNILLDAEGHCKLA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 62.7 bits (152), Expect = 3e-11
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 5/107 (4%)

Query: 29  AQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTE- 83
           +Q+  KE+  +  EI +++  +H  IV Y       EE  L + +EY+PGGS+ D +   
Sbjct: 41  SQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY 100

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             + E       R++LQ + +LHSN ++HRDIK  NIL    G+VKL
Sbjct: 101 GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 7/121 (5%)

Query: 15  RRFFS-KILSNP--ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
             +++ K+++ P  I L Q+   + + NE  V++E  HP I+    +      L+++MEY
Sbjct: 26  EHYYALKVMAIPEVIRLKQE---QHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY 82

Query: 72  LPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +PGG L + +                E++ ALE+LHS ++++RD+K +NILL  +G +KL
Sbjct: 83  VPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKL 142

Query: 131 S 131
           +
Sbjct: 143 T 143

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 62.8 bits (153), Expect = 5e-11
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 7/98 (7%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEEL---WVVMEYLPG--GSLTDVVTETCMDEGQIA 92
           + EI ++   +HPNIV   +  +VG+ L   ++VMEY      SL D +  T   E Q+ 
Sbjct: 54  LREITLLLNLRHPNIVELKE-VVVGKHLDSIFLVMEYCEQDLASLLDNMP-TPFSESQVK 111

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  ++L+ L++LH N +IHRD+K  N+LL   G +K+
Sbjct: 112 CLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKI 149

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 63.1 bits (153), Expect = 5e-11
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + +  SD   +  K+L     L ++ +  ++    ++++  KHP +V    S+   E+
Sbjct: 11  VLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEK 70

Query: 65  LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+ V++Y+ GG L   +  E C  E +      EV  A+ +LHS  +I+RD+K +NILL 
Sbjct: 71  LYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD 130

Query: 124 LDGSVKLS 131
             G V L+
Sbjct: 131 SQGHVVLT 138

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 62.5 bits (152), Expect = 5e-11
 Identities = 30/102 (29%), Positives = 60/102 (58%), Gaps = 7/102 (6%)

Query: 37  IINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-----ETCMDEGQ 90
           I++E+ +++E  +HPNIV Y  ++L  + L++VM+ + G  L +        +    E +
Sbjct: 55  IVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEER 114

Query: 91  IAAVCREVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLS 131
           I  +  +++ AL +LH   +++HRD+  +NI+LG D  V ++
Sbjct: 115 IWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTIT 156

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 62.6 bits (152), Expect = 5e-11
 Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC----MDEGQIA 92
           II E+ ++ +   P IV++  ++ +   +++ MEY+  GSL  +         + E  + 
Sbjct: 46  IIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLR 105

Query: 93  AVCREVLQALEFL-HSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY 151
            +   V++ L+FL   + +IHRD+K  N+L+  +G VKL  +   ++  L   ++K  I 
Sbjct: 106 RITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFG--VSGNLVASLAKTNIG 163

Query: 152 CWDWTA 157
           C  + A
Sbjct: 164 CQSYMA 169

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 62.1 bits (151), Expect = 5e-11
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 10/137 (7%)

Query: 17  FFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS 76
           F  K+L     +A+     +     ++M + + P +     S+   + L++VMEYL GG 
Sbjct: 24  FAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGD 83

Query: 77  LTDVV-TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN- 134
              ++ T   + E        EV+  +E LH   +IHRDIK +N+L+   G +KL+ +  
Sbjct: 84  CASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGL 143

Query: 135 --------RFIATKLYI 143
                   +F+ T  Y+
Sbjct: 144 SRNGLENKKFVGTPDYL 160

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.4 bits (152), Expect = 5e-11
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 39  NEILVMRENKHPNIVNYLD-SYLVGE-ELWVVMEYLPGGSLTDVVTET--CMDEGQIAAV 94
            EI ++R   H NIV Y       G   L ++MEYLP GSL D +      ++  ++   
Sbjct: 55  REIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLF 114

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             ++ + +++L S + IHRD+ + NIL+  +  VK+S
Sbjct: 115 SSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKIS 151

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 62.1 bits (151), Expect = 7e-11
 Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTG-------MEPKK----ELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ++G V  A + STG       M+ +K    EL+ NE+++MR+ +HPNIV    SYLVG+E
Sbjct: 31  STGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDE 90

Query: 208 LWNIVNYLD 216
           LW ++ +L+
Sbjct: 91  LWVVMEFLE 99

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 62.4 bits (152), Expect = 8e-11
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 33  KKELIINEI---LVMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVV 81
           KK++I+ +      M E        KHP +      +   + L+ VMEY+ GG L   + 
Sbjct: 29  KKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ 88

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                DE +      E++  L+FLH   +I+RD+K DN+LL  +G +K+
Sbjct: 89  RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKI 137

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 62.1 bits (151), Expect = 9e-11
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLH 106
           +HP + +   ++   E L+ VMEYL GG L   +  +   DE +      E++  L+FLH
Sbjct: 54  EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLH 113

Query: 107 SNQVIHRDIKSDNILLGLDGSVKLS 131
              +I+RD+K DN+LL  DG +K++
Sbjct: 114 KKGIIYRDLKLDNVLLDKDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
             G VY A    TG E            KKE IINEI ++++ KHPNIV Y  SYL  +E
Sbjct: 12  GFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDE 71

Query: 208 LWNIVNYLD 216
           LW ++ +  
Sbjct: 72  LWIVMEFCS 80

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 15/97 (15%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT------DVVTETCMDEGQ--IAAV 94
           ++ E  +P +V    S+     L+++MEYLPGG +       D  TE   +E +  IA  
Sbjct: 54  ILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTE---EETRFYIA-- 108

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             E + A++ +H    IHRDIK DN+LL   G +KLS
Sbjct: 109 --ETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLS 143

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + R  ++++ +  K+L     L ++ +K ++    ++++  KHP +V    S+   ++
Sbjct: 11  VLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 70

Query: 65  LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+ V++Y+ GG L   +  E C  E +      E+  AL +LHS  +++RD+K +NILL 
Sbjct: 71  LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 130

Query: 124 LDGSVKLSKW 133
             G + L+ +
Sbjct: 131 SQGHIVLTDF 140

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQI 91
           K   + E  ++++  HPNIV  +   +  + +++VME +PGGSL   +   +  +   ++
Sbjct: 36  KRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKL 95

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  +    +E+L S   IHRD+ + N L+G +  +K+S
Sbjct: 96  LQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKIS 135

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +D   I +  
Sbjct: 46  IREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYL 105

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            ++LQ + + HS++V+HRD+K  N+L+  +G++KL
Sbjct: 106 YQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKL 140

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQA 101
           ++   KHP IV+ + ++  G +L++++EYL GG L   +  E    E        E+  A
Sbjct: 53  ILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLA 112

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           LE LH   +I+RD+K +NILL   G VKL+
Sbjct: 113 LEHLHQQGIIYRDLKPENILLDAQGHVKLT 142

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 12  SDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVM 69
           + D+++  K +  P + +  +  +KE ++     + + KHPNIV + +S+     L++VM
Sbjct: 23  NSDQKYAMKEIRLPKSSSAVEDSRKEAVL-----LAKMKHPNIVAFKESFEADGHLYIVM 77

Query: 70  EYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
           EY  GG L   +         E  I     ++   ++ +H  +V+HRDIKS NI L  +G
Sbjct: 78  EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG 137

Query: 127 SVKL 130
            VKL
Sbjct: 138 KVKL 141

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCR 96
           EI +++  +H  IV Y        E  L + MEY+PGGS+ D +     + E       R
Sbjct: 54  EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTR 113

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++L+ + +LHSN ++HRDIK  NIL    G+VKL
Sbjct: 114 QILEGMSYLHSNMIVHRDIKGANILRDSAGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 23/147 (15%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L +  T AQ       + E  VM   +HPN+V  L   L G  L++V EY+  GSL D
Sbjct: 35  KCLKDDSTAAQA-----FLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD 89

Query: 80  ---------VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                    +     +          +V + +E+L     +HRD+ + N+L+  D   K+
Sbjct: 90  YLRSRGRAVITLAQQLG------FALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKV 143

Query: 131 SKWNRFIATKLYIEISKVIIYCWDWTA 157
           S +          +  K+ +    WTA
Sbjct: 144 SDFGLAKEASQGQDSGKLPV---KWTA 167

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 38  INEILVMRENKHPNIVNYLD--SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVC 95
             EI +++   H NIV Y    S   G+ L ++MEY+P GSL D + +  ++  Q+    
Sbjct: 54  KKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFA 113

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +++ + + +LHS   IHRD+ + N+LL  D  VK+
Sbjct: 114 QQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKI 148

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETC-MDEGQIAAV 94
           I EI +M+E KH NIV   D      +L +V EY+        D       +D   + + 
Sbjct: 46  IREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSF 105

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             ++L+ + F H N+V+HRD+K  N+L+   G +KL
Sbjct: 106 TYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKL 141

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 15/77 (19%)

Query: 63  EELWVVMEYLPGGSLT------DVVTETCMDEGQ--IAAVCREVLQALEFLHSNQVIHRD 114
           E L++VMEY+PGG L       DV  E   +  +  IA    E++ AL+ +H    IHRD
Sbjct: 74  EHLYLVMEYMPGGDLMNLLIRKDVFPE---ETARFYIA----ELVLALDSVHKLGFIHRD 126

Query: 115 IKSDNILLGLDGSVKLS 131
           IK DNIL+  DG +KL+
Sbjct: 127 IKPDNILIDADGHIKLA 143

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINE--ILVMRENKHPNIVNYLDSYLVG 62
           V + R     R +  K+L   + L Q    E  + E  IL +  N HP +      +   
Sbjct: 11  VMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARN-HPFLTQLYCCFQTP 68

Query: 63  EELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           + L+ VME++ GG L   + ++   DE +      E+  AL FLH   +I+RD+K DN+L
Sbjct: 69  DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVL 128

Query: 122 LGLDGSVKLS 131
           L  +G  KL+
Sbjct: 129 LDHEGHCKLA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 60.5 bits (146), Expect = 4e-10
 Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + R  +  + +  KIL   + +A+       + E  V++  +HP + +   S+   + 
Sbjct: 11  VILVREKASGKYYAMKILKKEVIIAKDEVAH-TLTESRVLKNTRHPFLTSLKYSFQTKDR 69

Query: 65  LWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L  VMEY+ GG L   +  E    E +      E++ AL++LHS ++++RD+K +N++L 
Sbjct: 70  LCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD 129

Query: 124 LDGSVKLSKW 133
            DG +K++ +
Sbjct: 130 KDGHIKITDF 139

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--CMDEGQIAAVC 95
           I E  VM +  HPN+V           +++V EY+  G L + + E    +    +  +C
Sbjct: 47  IEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC 106

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +V +A+E+L SN  IHRD+ + N L+G D  VK+S
Sbjct: 107 SDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVS 142

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 59.6 bits (144), Expect = 6e-10
 Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVCREVLQALEFL 105
           +HP + +   ++   E L+ VMEYL GG L   + ++C   D  +      E++  L+FL
Sbjct: 54  EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHI-QSCHKFDLPRATFYAAEIICGLQFL 112

Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLS 131
           HS  +++RD+K DNILL  DG +K++
Sbjct: 113 HSKGIVYRDLKLDNILLDTDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 59.8 bits (145), Expect = 6e-10
 Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + +  +D + +  K+L     L ++ +K ++    ++++  KHP +V    S+   ++
Sbjct: 11  VLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADK 70

Query: 65  LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+ V++Y+ GG L   +  E    E +      E+  AL +LHS  +I+RD+K +NILL 
Sbjct: 71  LYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD 130

Query: 124 LDGSVKLS 131
             G V L+
Sbjct: 131 SQGHVVLT 138

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.0 bits (145), Expect = 7e-10
 Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + R  S  + +  K+LS    + ++        E  +M     P +V    ++   + 
Sbjct: 59  VQLVRHKSSQKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117

Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL 124
           L++VMEY+PGG L ++++   + E        EV+ AL+ +HS  +IHRD+K DN+LL  
Sbjct: 118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK 177

Query: 125 DGSVKLSKW 133
            G +KL+ +
Sbjct: 178 HGHLKLADF 186

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 59.8 bits (145), Expect = 7e-10
 Identities = 28/67 (41%), Positives = 43/67 (64%)

Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL 124
           L++VMEY+PGG L ++++   + E        EV+ AL+ +HS   IHRD+K DN+LL  
Sbjct: 118 LYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 177

Query: 125 DGSVKLS 131
            G +KL+
Sbjct: 178 SGHLKLA 184

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV-C 95
           +  E  ++ E  HP IVN + S+     ++ ++E++ GG L   + +       +A    
Sbjct: 65  VAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYH 124

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            E++ A E+LHS  +I+RD+K +N+LL   G VK++
Sbjct: 125 AELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVT 160

Length = 329

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 387
            L+LI  N  P + E  K S+ F+DF+  CL ++ + R SA  LLKH F+K A+  + LT
Sbjct: 206 VLFLIPKNNPPSL-EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLT 264

Query: 388 PLI 390
            LI
Sbjct: 265 LLI 267

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVG 62
           V + R  +  R +  KIL   + +A   K E+   + E  V++  +HP +     ++   
Sbjct: 11  VILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 67

Query: 63  EELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           + L  VMEY  GG L   +  E    E +      E++ ALE+LHS  V++RDIK +N++
Sbjct: 68  DRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM 127

Query: 122 LGLDGSVKLS 131
           L  DG +K++
Sbjct: 128 LDKDGHIKIT 137

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----TETCMDEGQIA 92
           I EI ++++  HPN++ Y  S++   EL +V+E    G L+ ++      +  + E  + 
Sbjct: 50  IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVW 109

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK--WNRFIATK 140
               ++  ALE +HS +V+HRDIK  N+ +   G VKL      RF ++K
Sbjct: 110 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N  P +   +  S  F++F+D CL++  + R S+  LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNDSPTLSSND-WSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270

Query: 378 KIARPLASLTPLIMAAKEAAKG 399
              RP   +  LI   K+A + 
Sbjct: 271 LRERPPTVIIDLIQRTKDAVRE 292

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +   + E  +  + 
Sbjct: 46  IIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKIS 105

Query: 96  REVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL-----------SKWNRFIATKLYI 143
             VL+ L +L    +++HRD+K  NIL+   G +KL           S  N F+ T+ Y+
Sbjct: 106 IAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 165

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVV---MEYLPGGSLTDVVTETCMDEGQIAAVC 95
           NE+++    +HPNI+     +  G  LWV+   M Y    SL        M E  I  + 
Sbjct: 48  NEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNIL 107

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              L+ L +LH N  IHR+IK+ +IL+  DG V LS
Sbjct: 108 FGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLS 143

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
           KKE+II          E  V++  +HP +     S+   + L  VMEY  GG L   +  
Sbjct: 29  KKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 88

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E    E +      E++ AL +LHS  V++RD+K +N++L  DG +K++
Sbjct: 89  ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKIT 137

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 13/120 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ E   + E  +  V 
Sbjct: 50  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS 109

Query: 96  REVLQALEFL-HSNQVIHRDIKSDNILLGLDGSVKL-----------SKWNRFIATKLYI 143
             VL+ L +L   +Q++HRD+K  NIL+   G +KL           S  N F+ T+ Y+
Sbjct: 110 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 169

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 57.4 bits (138), Expect = 2e-09
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCR 96
           EI +++   H  IV Y        E  L + ME++PGGS+ D +     + E       R
Sbjct: 54  EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTR 113

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++L+ + +LHSN ++HRDIK  NIL    G+VKL
Sbjct: 114 QILEGVSYLHSNMIVHRDIKGANILRDSVGNVKL 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 8/59 (13%)

Query: 75  GSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            SL D++      ++E +I AVC + L AL  LH         KS NILL  DG +KL 
Sbjct: 1   VSLADILEVRGRPLNEEEIWAVCLQCLGALRELHRQA------KSGNILLTWDGLLKLD 53

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV-CREVLQA 101
           ++ E  +  +V    S+   + L+ VM+Y+PGG +  ++    + E  +A     E+  A
Sbjct: 54  ILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCA 113

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +E +H    IHRDIK DNIL+  DG +KL+
Sbjct: 114 IESVHKMGFIHRDIKPDNILIDRDGHIKLT 143

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K++   + LAQ+        E  ++  +  P I     ++   + L++VMEY PGG L  
Sbjct: 32  KVMKKSVLLAQE-TVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLS 90

Query: 80  VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++   E   DE        E++ A+  +H    +HRDIK +N+L+   G +KL
Sbjct: 91  LLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKL 143

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET---CMDEGQIAAVCR 96
           E  ++    HP +     S+     L +VM+Y PGG L  ++      C+ E        
Sbjct: 51  EQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAA 110

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           EVL ALE+LH   +++RD+K +NILL   G + LS
Sbjct: 111 EVLLALEYLHLLGIVYRDLKPENILLHESGHIMLS 145

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.7 bits (137), Expect = 5e-09
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP---GGSLTDVVTETCMDEGQIAAV 94
           I EI +++E +HPNIV   D  +    L+++ E+L       L  +     MD   + + 
Sbjct: 47  IREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSY 106

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             ++LQ + F HS +V+HRD+K  N+L+   G +KL+
Sbjct: 107 LYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLA 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 56.6 bits (136), Expect = 6e-09
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N+ P   +    S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270

Query: 378 KIARPLASLTPLIMAAKEAAK 398
              RP   +  LI   K+A +
Sbjct: 271 LRERPPTVIMDLIQRTKDAVR 291

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 56.4 bits (137), Expect = 6e-09
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 23/117 (19%)

Query: 13  DDRRFFSKILS----NPITLAQQPKKELIINEILV---MRENKHPNIVNYLDSYLVGEEL 65
             + F  KI+     N I             E +V   M++N +   +    S    +  
Sbjct: 40  TQKLFVQKIIKAKNFNAI-------------EPMVHQLMKDNPN--FIKLYYSVTTLKGH 84

Query: 66  WVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
            ++M+Y+  G L D++  E  + E ++  + R++++AL  LH + +IH DIK +N+L
Sbjct: 85  VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141

Length = 267

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.0 bits (136), Expect = 7e-09
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 327 QALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
            ALY I ++ + PEI E   LS+  +DFL +CL  + + R +A  LL+HPFL
Sbjct: 211 AALYKIGSSGEPPEIPEH--LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 56.1 bits (136), Expect = 7e-09
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           AL+ I  N  P +K  E  S+ F DF+ +CL +  E R     LL+HPF+
Sbjct: 226 ALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 56.8 bits (137), Expect = 7e-09
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQA 101
           V+ E+  P +V+   S+   + L+++ME+LPGG L T ++      E        E + A
Sbjct: 54  VLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLA 113

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +E +H    IHRDIK DNIL+   G +KLS
Sbjct: 114 IEAVHKLGFIHRDIKPDNILIDRGGHIKLS 143

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 57.5 bits (139), Expect = 7e-09
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 49  HPNIVNYLDSYLVGEE-LWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALEFLH 106
           HPNIV  LDS       L+ V EY+PG +L +V+  +  +  G+   +  +VL AL   H
Sbjct: 37  HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAH 96

Query: 107 SNQVIHRDIKSDNILLGLDG 126
           +  ++HRD+K  NI++   G
Sbjct: 97  NQGIVHRDLKPQNIMVSQTG 116

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 56.6 bits (136), Expect = 7e-09
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + R  S  + +  K+LS    + ++        E  +M     P +V    ++     
Sbjct: 59  VQLVRHKSTRKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117

Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL 124
           L++VMEY+PGG L ++++   + E        EV+ AL+ +HS   IHRD+K DN+LL  
Sbjct: 118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 177

Query: 125 DGSVKLSKW 133
            G +KL+ +
Sbjct: 178 SGHLKLADF 186

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 56.7 bits (137), Expect = 7e-09
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREV 98
           E+ +M E KH NI+  +D Y+ G+ + +VM+ +    L  VV  +  + E Q+  +  ++
Sbjct: 70  ELKIMNEIKHENIMGLVDVYVEGDFINLVMDIM-ASDLKKVVDRKIRLTESQVKCILLQI 128

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L  L  LH    +HRD+   NI +   G  K+
Sbjct: 129 LNGLNVLHKWYFMHRDLSPANIFINSKGICKI 160

Length = 335

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 55.8 bits (134), Expect = 8e-09
 Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 8/123 (6%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V++ R  +D +++  K L+  +  A + +++    E  ++ + KHPNIV Y +S+  GE+
Sbjct: 16  VSLVRHRTDGKQYVIKKLN--LRNASRRERKAAEQEAQLLSQLKHPNIVAYRESW-EGED 72

Query: 65  --LWVVMEYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDN 119
             L++VM +  GG L   + E     + E Q+     ++  AL++LH   ++HRD+K+ N
Sbjct: 73  GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQN 132

Query: 120 ILL 122
           + L
Sbjct: 133 VFL 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 35/120 (29%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 14  DRRFFS-KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL 72
           D + ++ K+L   I L ++ +K ++    ++++  KHP +V    S+   E+L+ V++++
Sbjct: 19  DGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV 78

Query: 73  PGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            GG L   +  E    E +      E+  AL +LHS  +++RD+K +NILL   G V L+
Sbjct: 79  NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLT 138

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           A+++I     P + + EK S  F DF+ +CL ++ E R SA  LL+HPF+
Sbjct: 207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVC 95
           I E  VM +  H  +V           +++V EY+  G L + + E        Q+  +C
Sbjct: 47  IEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMC 106

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++V + + +L S Q IHRD+ + N L+   G VK+S
Sbjct: 107 KDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVS 142

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 24/104 (23%)

Query: 40  EILVMRE-NKHPNIV---------NYLDSYLVGEELWVVMEYLPGGSLTD---VVTETCM 86
           EI+ ++E   HPNIV         N  D YLV E     ME       TD   V+    +
Sbjct: 56  EIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFE----YME-------TDLHAVIRANIL 104

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++     +  ++L+AL+++HS  VIHRD+K  NILL  D  VKL
Sbjct: 105 EDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKL 148

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVC 95
           ++ E  ++   K   +V  L ++   E L++ MEY+PGG    ++     + E       
Sbjct: 48  VLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYM 107

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            E+ +A++ LH    IHRD+K +N L+   G +KL+
Sbjct: 108 AEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLT 143

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT--ETCM 86
                +E  + E  +MR+  HP+IV  L   +    +W+VME  P G L   +   +  +
Sbjct: 46  TSPSVREKFLQEAYIMRQFDHPHIVK-LIGVITENPVWIVMELAPLGELRSYLQVNKYSL 104

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIE 144
           D   +     ++  AL +L S + +HRDI + N+L+     VKL  +  +R++  + Y +
Sbjct: 105 DLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164

Query: 145 ISKV 148
            SK 
Sbjct: 165 ASKG 168

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 13/99 (13%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD--EGQI-AAVCR 96
           EI +++E KH NIV   D     ++L +V EY       D   +   D   G I   + +
Sbjct: 49  EICLLKELKHKNIVRLYDVLHSDKKLTLVFEY------CDQDLKKYFDSCNGDIDPEIVK 102

Query: 97  ----EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               ++L+ L F HS+ V+HRD+K  N+L+  +G +KL+
Sbjct: 103 SFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 5   VTIDRFSSDDRRF-FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE 63
           V + R     +RF   KI    + L  Q ++  +  +IL   EN  P +V+   S+    
Sbjct: 17  VYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN--PFVVSMFCSFETKR 74

Query: 64  ELWVVMEYLPGGSLTDVVTETCMDEGQIAAV-CREVLQALEFLHSNQVIHRDIKSDNILL 122
            L +VMEY+ GG    ++         +A +   E + ALE+LH+  ++HRD+K DN+L+
Sbjct: 75  HLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI 134

Query: 123 GLDGSVKLS 131
              G +KL+
Sbjct: 135 TSMGHIKLT 143

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 53.9 bits (129), Expect = 5e-08
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N  P ++  E  +  F+ F+D CL++  + R +++ LL+H F+
Sbjct: 218 PPLFNMNAMSALYHIAQNDSPTLQSNE-WTDSFRGFVDYCLQKIPQERPASAELLRHDFV 276

Query: 378 KIARPLASLTPLIMAAKEAAK 398
           +  RP   L  LI   K+A +
Sbjct: 277 RRDRPARVLIDLIQRTKDAVR 297

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 22/90 (24%)

Query: 161 GTVYTAIESSTG---------MEPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEELW 209
           G VY A + +TG         +EP  +   I  EI +++E +HPNIV Y  SYL  ++LW
Sbjct: 17  GDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLW 76

Query: 210 NIVNYL------DSYLVGEELWYTKPIEEP 233
            ++ Y       D Y V        P+ E 
Sbjct: 77  IVMEYCGGGSLQDIYQVTRG-----PLSEL 101

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 316 LIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK 373
           L P +F L   +AL+LI+ +    P++K+KEK S +F DF+ +CL ++ + R +A+ LL+
Sbjct: 200 LQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259

Query: 374 HPF 376
           HPF
Sbjct: 260 HPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV----- 80
            T+ ++ +K L+++  +VMR +  P IV +  +     + W+ ME L   SL        
Sbjct: 39  STVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME-LMDISLDKFYKYVY 97

Query: 81  -VTETCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL 130
            V ++ + E  +  +    ++AL +L    ++IHRD+K  NILL  +G++KL
Sbjct: 98  EVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKL 149

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 53.3 bits (129), Expect = 7e-08
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 13/100 (13%)

Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLPGGSLTD----VVTETCMDEGQ 90
           EI ++R  +H NI+  LD     S     ++++V E +     TD    + +   + +  
Sbjct: 49  EIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME----TDLHKVIKSPQPLTDDH 104

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           I     ++L+ L++LHS  VIHRD+K  NIL+  +  +K+
Sbjct: 105 IQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKI 144

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 53.5 bits (128), Expect = 8e-08
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV-CREVLQA 101
           ++ E  +  +V    S+   + L+ VM+Y+PGG +  ++    +    +A     E+  A
Sbjct: 54  ILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLA 113

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +E +H    IHRDIK DNIL+ LDG +KL+
Sbjct: 114 IESVHKMGFIHRDIKPDNILIDLDGHIKLT 143

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 53.1 bits (127), Expect = 8e-08
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 13/120 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +   + E  +  V 
Sbjct: 50  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 109

Query: 96  REVLQALEFL-HSNQVIHRDIKSDNILLGLDGSVKL-----------SKWNRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL           S  N F+ T+ Y+
Sbjct: 110 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 169

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 52.7 bits (126), Expect = 9e-08
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL 372
           P+F  P L      +A+ +I  N  P++K   K+S   + FLD+ L  +   RA+A+ LL
Sbjct: 215 PYFNEPPL------KAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268

Query: 373 KHPFLKIARPLASLTPLI 390
           KHPFL  A P + + PL+
Sbjct: 269 KHPFLAKAGPPSCIVPLM 286

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.2 bits (127), Expect = 9e-08
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N+ P ++  E  S  F++F+D CL++  + R ++  LLKH F+
Sbjct: 222 PPLFNMNAMSALYHIAQNESPTLQSNE-WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280

Query: 378 KIARPLASLTPLIMAAKEAAK 398
              RP   L  LI   K+A +
Sbjct: 281 LRERPETVLIDLIQRTKDAVR 301

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 53.7 bits (129), Expect = 1e-07
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM----DEGQIAAVCREVLQALE 103
           K P IV+   S      +++VMEYL GG   DV +   +    DE        EV  AL+
Sbjct: 62  KSPFIVHLYYSLQSANNVYLVMEYLIGG---DVKSLLHIYGYFDEEMAVKYISEVALALD 118

Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +LH + +IHRD+K DN+L+  +G +KL+
Sbjct: 119 YLHRHGIIHRDLKPDNMLISNEGHIKLT 146

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 13  DDRRFFSKILSNPITLAQQPK-KELIINEILVM-RENKHPNIVNYLDSYLVGEELWVVME 70
           D  + ++  +    T+ Q+ K  E    E  V+    + P +V    ++    +L ++++
Sbjct: 26  DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILD 85

Query: 71  YLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK 129
           Y+ GG L T +       E ++     E++ AL+ LH   +I+RDIK +NILL  +G V 
Sbjct: 86  YVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVV 145

Query: 130 LS 131
           L+
Sbjct: 146 LT 147

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLH 106
           ++P + +   ++   E L+ VME+L GG L   + +    D  +      E++  L+FLH
Sbjct: 54  ENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLH 113

Query: 107 SNQVIHRDIKSDNILLGLDGSVKLS 131
           S  +I+RD+K DN++L  DG +K++
Sbjct: 114 SKGIIYRDLKLDNVMLDRDGHIKIA 138

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 24/77 (31%), Positives = 48/77 (62%)

Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 40  TVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99

Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 100 EGGALTDIVTHTRMNEE 116

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 10/73 (13%)

Query: 305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
           G   WS   +            Q ++ +    KP I +  +LS   +DFLD+CLE + + 
Sbjct: 202 GKRPWSELDNEF----------QIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKK 251

Query: 365 RASASLLLKHPFL 377
           R +AS LL+HPF+
Sbjct: 252 RPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 15  RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG 74
           R +  KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  G
Sbjct: 21  RYYAMKILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 79

Query: 75  GSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSK 132
           G L   +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ 
Sbjct: 80  GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD 139

Query: 133 W 133
           +
Sbjct: 140 F 140

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%)

Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           I E+ V+R     +HPN+V   D   V       +L +V E++     T  D V E  + 
Sbjct: 49  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 108

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +KL+ +         + ++ 
Sbjct: 109 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 168

Query: 148 VIIYCW 153
           V++  W
Sbjct: 169 VVVTLW 174

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV--- 94
           + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  ++ AV   
Sbjct: 50  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLL 107

Query: 95  --CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               ++  A+E+L     IHRD+ + N L+G +  VK++
Sbjct: 108 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 146

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 51.6 bits (123), Expect = 3e-07
 Identities = 19/42 (45%), Positives = 32/42 (76%)

Query: 174 EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           + ++EL+ NE+++MR+ +H N+V    SYLVGEELW ++ +L
Sbjct: 59  QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCRE 97
           + E  +M    H N++  L   ++   L +V E  P GSL D + +  +    I+ +C  
Sbjct: 44  LKEAAIMHSLDHENLIR-LYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDY 102

Query: 98  VLQ---ALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +Q    + +L S + IHRD+ + NILL  D  VK+ 
Sbjct: 103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIG 139

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 51.6 bits (123), Expect = 3e-07
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 52  IVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQV 110
           +V    S+     L+++ME+LPGG + T ++ +  + E        E + A++ +H    
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGF 122

Query: 111 IHRDIKSDNILLGLDGSVKLSKW 133
           IHRDIK DN+LL   G VKLS +
Sbjct: 123 IHRDIKPDNLLLDAKGHVKLSDF 145

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 37/137 (27%), Positives = 75/137 (54%), Gaps = 9/137 (6%)

Query: 15  RRFFS-KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP 73
           RR  + K++   IT+  Q +   I++E+ ++ +   P I+ +  ++ V   + +  E++ 
Sbjct: 26  RRILAVKVIPLDITVELQKQ---IMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82

Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           GGSL DV  +  + E  +  +   V++ L +L S +++HRD+K  N+L+   G VKL  +
Sbjct: 83  GGSL-DVYRK--IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDF 139

Query: 134 NRFIATKLYIEISKVII 150
              ++T+L   I+K  +
Sbjct: 140 G--VSTQLVNSIAKTYV 154

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVT---ETCMDEGQIA 92
           + E  VM + +H N+V  L   +V E+  L++V EY+  GSL D +     + +    + 
Sbjct: 47  LAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +V +A+E+L +N  +HRD+ + N+L+  D   K+S
Sbjct: 106 KFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVS 144

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 20/118 (16%)

Query: 34  KELI--INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD----------- 79
           K+L   ++E+ +M+   KH NI+N L        L+VV+EY   G+L D           
Sbjct: 57  KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEY 116

Query: 80  ------VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                    E  + +  + +   +V + +EFL S + IHRD+ + N+L+  D  +K++
Sbjct: 117 ASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIA 174

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 25/121 (20%)

Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
             T+  Q +K L+++  + MR    P  V +  +     ++W+ ME          V +T
Sbjct: 35  RATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME----------VMDT 84

Query: 85  CMD--------------EGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVK 129
            +D              E  +  +   +++ALE+LHS   VIHRD+K  N+L+  +G VK
Sbjct: 85  SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVK 144

Query: 130 L 130
           L
Sbjct: 145 L 145

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 51.5 bits (123), Expect = 3e-07
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV-CREVLQA 101
           ++ E  +  +V    S+   + L+ VM+Y+PGG +  ++    +    +A     E+  A
Sbjct: 54  ILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCA 113

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +E +H    IHRDIK DNIL+  DG +KL+ +
Sbjct: 114 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDF 145

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHS 107
           HP +V     +     L+ V+E++ GG L   +  +  + E        E+  AL FLH 
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHE 114

Query: 108 NQVIHRDIKSDNILLGLDGSVKLSKW 133
             +I+RD+K DN+LL  +G +KL+ +
Sbjct: 115 RGIIYRDLKLDNVLLDAEGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 49.8 bits (120), Expect = 7e-07
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 12/63 (19%)

Query: 159 ASGTVYTAIESSTG------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           + G VY A +  TG            ++  +E I+ EI ++++ KHPNIV   D +   +
Sbjct: 11  SFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDED 70

Query: 207 ELW 209
           +L+
Sbjct: 71  KLY 73

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 50.2 bits (120), Expect = 7e-07
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 38  INEILVMRENKHPNIVNY----------LDSYLVGEELWVVMEY----LPGGSLTDVVTE 83
           I EI ++R+  H NIVN           LD        ++V EY    L G   + +V  
Sbjct: 54  IREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVH- 112

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               E  I +  +++L+ L + H    +HRDIK  NILL   G +KL+
Sbjct: 113 --FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLA 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 21/109 (19%)

Query: 38  INEILVMRENKHPNIVNYL---------------DSYLVGEELWVVMEYLPGGSLTDVVT 82
           + EI +++  KH N+VN +                 YLV E      E+   G L++   
Sbjct: 59  LREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFE----FCEHDLAGLLSNKNV 114

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +      +I  V + +L  L ++H N+++HRD+K+ NIL+  DG +KL+
Sbjct: 115 K--FTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLA 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 40  EILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAV 94
           E+ ++R  KH NI+   D         ++++VVM+ L    L  ++ ++  + E  I   
Sbjct: 54  ELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMD-LMESDLHHIIHSDQPLTEEHIRYF 112

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             ++L+ L+++HS  VIHRD+K  N+L+  D  +++
Sbjct: 113 LYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRI 148

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 50.9 bits (122), Expect = 9e-07
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 21/122 (17%)

Query: 33  KKELIINEIL---VMRENK------HPNIVNYLDSYLVGEELWVVMEYLPGGSLT----- 78
           +++L  N +L    +RE K      HP IV        G+ ++  M Y+ G +L      
Sbjct: 36  REDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKS 95

Query: 79  ----DVVTETCMDEGQIAAVCR---EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               + +++   ++  + A      ++   +E++HS  V+HRD+K DNILLGL G V + 
Sbjct: 96  VWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVIL 155

Query: 132 KW 133
            W
Sbjct: 156 DW 157

Length = 932

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIA- 92
           +E  I E  VM +  HP +V         + L++V E++  G L + + +    +G+++ 
Sbjct: 43  EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ---RQGKLSK 99

Query: 93  ----AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLYIEIS 146
               ++C++V + +E+L  N  IHRD+ + N L+   G VK+S +   R++    Y   S
Sbjct: 100 DMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L      A   KKE  + E  VM +  HP IV  L     GE L +VME  P G L  
Sbjct: 29  KTLKQEHIAAG--KKE-FLREASVMAQLDHPCIVR-LIGVCKGEPLMLVMELAPLGPLLK 84

Query: 80  -VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +     +    +  +  +V   + +L S   +HRD+ + N+LL      K+S
Sbjct: 85  YLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKIS 137

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 65  LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+++ME+LPGG + T ++ +  + E +      E + A++ +H    IHRDIK DN+LL 
Sbjct: 76  LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD 135

Query: 124 LDGSVKLSKW 133
             G VKLS +
Sbjct: 136 SKGHVKLSDF 145

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 17/110 (15%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL----------TDVVTETCMDE 88
            E  +M + +HPNIV  L      +   ++ EYL  G L          +DV  E+  + 
Sbjct: 57  QEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDET 116

Query: 89  GQIAAVCREVLQ-------ALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            + +  C + L         +E+L S+  +HRD+ + N L+G   +VK+S
Sbjct: 117 VKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKIS 166

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 40  EILVMRENKHPNIVNY--LDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           EI ++R   H NIV Y  + +   G  + ++ME+LP GSL + +   +  ++  Q     
Sbjct: 56  EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA 115

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            ++ + +++L S Q +HRD+ + N+L+  +  VK+
Sbjct: 116 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKI 150

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 11/100 (11%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEEL---WVVMEYLPGGSLTDVVTETCMDE----GQ 90
           + EI ++ + +HPNIV  +   +VG  L   ++VMEY+    L  ++    M +     +
Sbjct: 52  LREINILLKLQHPNIVT-VKEVVVGSNLDKIYMVMEYVEH-DLKSLMET--MKQPFLQSE 107

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  +  ++L  +  LH N ++HRD+K+ N+LL   G +K+
Sbjct: 108 VKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKI 147

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 9/75 (12%)

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII 150
           I A+ R VL+A+++LH N++IHRDIK++NI +   G V L     F A    ++I+    
Sbjct: 184 ILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGD---FGAACFPVDINANKY 240

Query: 151 YCWDWTAVASGTVYT 165
           Y W      +GT+ T
Sbjct: 241 YGW------AGTIAT 249

Length = 391

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREV 98
           +IL   E  HP IV    ++    +L++++++L GG L T +  E    E  +     E+
Sbjct: 50  DILA--EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 107

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             AL+ LHS  +I+RD+K +NILL  +G +KL+
Sbjct: 108 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLT 140

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 45  RENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALE 103
           + + +P +V     +     L++V+EY+ GG L   +  +  + E        E+  AL 
Sbjct: 51  QASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALN 110

Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           FLH   +I+RD+K DN+LL  DG +KL+ +
Sbjct: 111 FLHERGIIYRDLKLDNVLLDADGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREV 98
           E  V+ +   P IV    S+   E+L++V+ ++ GG L   +  E   D  +      E+
Sbjct: 43  ERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAEL 102

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L ALE LH   VI+RD+K +NILL   G + L
Sbjct: 103 LCALENLHKFNVIYRDLKPENILLDYQGHIAL 134

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 13  DDRRFFS-KILSNPITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVGEELWVVM 69
           D RR ++ K+LS    +A++     I    +++R   ++ P IV    S+    +L++V 
Sbjct: 16  DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75

Query: 70  EYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +Y+ GG L   +  E    E +      E++ ALE LH   +++RD+K +NILL   G +
Sbjct: 76  DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHI 135

Query: 129 KL 130
            L
Sbjct: 136 AL 137

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 31/130 (23%), Positives = 61/130 (46%), Gaps = 1/130 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V + R    +R +  K++   +    +    +   + +  + + HP +V     +     
Sbjct: 11  VLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 70

Query: 65  LWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+ V+EY+ GG L   +  +  + E        E+  AL +LH   +I+RD+K DN+LL 
Sbjct: 71  LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD 130

Query: 124 LDGSVKLSKW 133
            +G +KL+ +
Sbjct: 131 SEGHIKLTDY 140

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 32  PKKEL-IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ 90
            + E   + E L+M +  H NIV  +         ++++E + GG L   + E      +
Sbjct: 50  EQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPER 109

Query: 91  --------IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK 132
                   +    R+V +  ++L  N  IHRDI + N LL   G  +++K
Sbjct: 110 PSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAK 159

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 40  EILVMRENKHPNIVNYLD-SYLVGE-ELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L +VMEYLP GSL D + +    +D  ++    
Sbjct: 55  EIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYA 114

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            ++ + +E+L S + +HRD+ + NIL+  +  VK+
Sbjct: 115 SQICKGMEYLGSKRYVHRDLATRNILVESENRVKI 149

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 5/116 (4%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+++  + L  + +     +E+  +    H  IV + D +   ++L ++MEY  GG L  
Sbjct: 95  KVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNK 154

Query: 80  VVTETCMD-----EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            + +   +     E ++  +  +++ AL+ +HS +++HRD+KS NI L   G +KL
Sbjct: 155 QIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKL 210

Length = 478

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 35/133 (26%), Positives = 70/133 (52%), Gaps = 7/133 (5%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINE--ILVMRENKHPNIVNYLDSYLVG 62
           V + +  + D+ F  KIL N   + ++ +      E  +LV  +N+    ++Y  ++   
Sbjct: 17  VAVVKLKNADKVFAMKIL-NKWEMLKRAETACFREERDVLVNGDNQWITTLHY--AFQDE 73

Query: 63  EELWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNI 120
             L++VM+Y  GG L  +++  E  + E        E++ A++ +H    +HRDIK DNI
Sbjct: 74  NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNI 133

Query: 121 LLGLDGSVKLSKW 133
           L+ ++G ++L+ +
Sbjct: 134 LMDMNGHIRLADF 146

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 9/90 (10%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-----ETCMDEGQIA 92
           ++E  ++R   HP ++  LD  +VG    +V   LP    +D+ T        +   Q+ 
Sbjct: 208 VHEARLLRRLSHPAVLALLDVRVVGGLTCLV---LPKYR-SDLYTYLGARLRPLGLAQVT 263

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           AV R++L A++++H   +IHRDIK++N+L+
Sbjct: 264 AVARQLLSAIDYIHGEGIIHRDIKTENVLV 293

Length = 461

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 31/109 (28%)

Query: 38  INEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETCMDEGQI---- 91
             EI ++RE KH N+V+ ++ +L    + ++++ +Y           E   D  QI    
Sbjct: 50  CREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY----------AE--HDLWQIIKFH 97

Query: 92  --AAVCR-----------EVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             A               ++L  + +LHSN V+HRD+K  NIL+  +G 
Sbjct: 98  RQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGP 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 17/119 (14%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIV-NYLDSYLVGEELW 66
              + D  +  KI         + K      E+ +++   +    V   L S       +
Sbjct: 16  LLGTKDEDYVLKINP------SREKGADREREVAILQLLARKGLPVPKVLASGESDGWSY 69

Query: 67  VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHS---NQVIHRDIKSDNILL 122
           ++ME++ G +L +V  E      +   +  ++ + L  LH      + H D+   NIL+
Sbjct: 70  LLMEWIEGETLDEVSEE------EKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILV 122

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 1/128 (0%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
           V +      D  +  KIL   + +     +  ++ + ++  ++K P +      +   + 
Sbjct: 16  VMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR 75

Query: 65  LWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           L+ VMEY+ GG L   + +     E Q      E+   L FLH   +I+RD+K DN++L 
Sbjct: 76  LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD 135

Query: 124 LDGSVKLS 131
            +G +K++
Sbjct: 136 SEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 63  EELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           + L+ VMEY+ GG L   +       E        E+   L FLHS  +I+RD+K DN++
Sbjct: 74  DRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVM 133

Query: 122 LGLDGSVKLS 131
           L  +G +K++
Sbjct: 134 LDAEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 29  AQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TET 84
           A   ++E +++E+ +M     H NIVN L +  +G  + V+ EY   G L + +    E+
Sbjct: 77  AHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRES 136

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            +    + +   +V + + FL S   IHRD+ + N+LL
Sbjct: 137 FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL 174

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 3/129 (2%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDS-YLVGE 63
           V +      D  +  KIL   + + Q    E  + E  V+  +  P  +  L S +   +
Sbjct: 16  VMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD 74

Query: 64  ELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            L+ VMEY+ GG L   + +     E        E+   L FLHS  +I+RD+K DN++L
Sbjct: 75  RLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML 134

Query: 123 GLDGSVKLS 131
             +G +K++
Sbjct: 135 DSEGHIKIA 143

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF +   + L+ I  N  P +   EK  + F  F+ QCL ++ E R S + LL+HPF+
Sbjct: 231 PPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFI 290

Query: 378 K 378
           K
Sbjct: 291 K 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.9 bits (111), Expect = 6e-06
 Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 7/123 (5%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT---ETCMDEGQIAAV 94
           + E  VM +  H N+V  L   ++   L++VME +  G+L + +       +   Q+   
Sbjct: 47  LEETAVMTKLHHKNLVRLL-GVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF 105

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD 154
             +V + +E+L S +++HRD+ + NIL+  DG  K+S +       + ++ SK+ +    
Sbjct: 106 SLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV---K 162

Query: 155 WTA 157
           WTA
Sbjct: 163 WTA 165

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 161 GTVYTAIESSTG---------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI 211
           G+VY AI   TG         +E   + II EI ++++   P IV Y  SY    +LW +
Sbjct: 17  GSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76

Query: 212 VNY 214
           + Y
Sbjct: 77  MEY 79

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA-- 380
           L+  + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + + LL+HPF+ +   
Sbjct: 211 LNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN 270

Query: 381 RPLASL 386
           +P+  L
Sbjct: 271 KPIREL 276

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 49  HPNIVNYLD---SYLVGEELWV--VMEYLPGGSLT--DVVTETCMDEGQIAAVCREVLQA 101
           HPNIV  +D   +     E  V  V E++     T  D V    +    I  + R+ L+ 
Sbjct: 61  HPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRG 120

Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW 153
           L+FLH+N ++HRD+K +NIL+   G VKL+ +         + ++ V++  W
Sbjct: 121 LDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLW 172

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 21/108 (19%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY-----------LPGGSLTDVVT 82
           KE  + E+ ++R  K  NIV   +++    +L++V EY           +P G   +   
Sbjct: 44  KETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPE--- 100

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                  ++ +   ++++A+ + H N ++HRDIK +N+L+  +  +KL
Sbjct: 101 -------KVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 65  LWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           L++VM+Y  GG L  +++  E  + E        E++ A+  +H    +HRDIK DN+LL
Sbjct: 76  LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL 135

Query: 123 GLDGSVKLS 131
            ++G ++L+
Sbjct: 136 DMNGHIRLA 144

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 22/100 (22%)

Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD-----------EGQI 91
           V++ +  P IV     ++   ++++ ME +           TC+D           E  +
Sbjct: 67  VLKSHDCPYIVKCYGYFITDSDVFICMELM----------STCLDKLLKRIQGPIPEDIL 116

Query: 92  AAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKL 130
             +   +++AL +L     VIHRD+K  NILL   G+VKL
Sbjct: 117 GKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKL 156

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 17/154 (11%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
            +  R   KIL +   L QQ        E+  ++  +H ++++      VGE ++++ E 
Sbjct: 28  KNRVRVAIKILKSDDLLKQQ----DFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83

Query: 72  LPGGSLTDVVTETCMDEGQIAAVCR------EVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           +  GSL   +      EGQ+  V        +V + + +L     IHRD+ + NIL+G D
Sbjct: 84  MEKGSLLAFLRSP---EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED 140

Query: 126 GSVKLSKWN--RFIATKLYIEISKVIIYCWDWTA 157
              K++ +   R I   +Y+   K I Y   WTA
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPY--KWTA 172

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 9/88 (10%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIA---AVC- 95
           E ++++   HP+++   D+ + G    +V+ +      +D+ T        +    A+  
Sbjct: 107 EAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS----SDLYTYLTKRSRPLPIDQALII 162

Query: 96  -REVLQALEFLHSNQVIHRDIKSDNILL 122
            +++L+ L +LH+ ++IHRD+K++NI +
Sbjct: 163 EKQILEGLRYLHAQRIIHRDVKTENIFI 190

Length = 357

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 10/116 (8%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V           + +V E++  G L+D +       G+ + 
Sbjct: 43  EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA---QRGKFSQ 99

Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
                +C +V + + +L S+ VIHRD+ + N L+G +  VK+S +   RF+    Y
Sbjct: 100 ETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY 155

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 17/117 (14%)

Query: 45  RENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMD 87
           +   HPNI+N L +      L++ +EY P G+L D +                 T + + 
Sbjct: 63  KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 122

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
             Q+     +V + +++L   Q IHRD+ + NIL+G +   K++ +      ++Y++
Sbjct: 123 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 179

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 20/127 (15%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDE-GQIAAV-- 94
           I E+ ++++ KH NIV   D     + L +V EYL      D   +  MD+ G I ++  
Sbjct: 52  IREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYL------DKDLKQYMDDCGNIMSMHN 105

Query: 95  ----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN----RFIATKLYIEIS 146
                 ++L+ L + H  +V+HRD+K  N+L+   G +KL+ +     + + TK Y   S
Sbjct: 106 VKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY---S 162

Query: 147 KVIIYCW 153
             ++  W
Sbjct: 163 NEVVTLW 169

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 27/73 (36%), Positives = 39/73 (53%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P  F  S  QA+  +  +  P++K   K+S + +DFL++ L  E + RA+A  LL HPFL
Sbjct: 215 PPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFL 274

Query: 378 KIARPLASLTPLI 390
                   L PLI
Sbjct: 275 LQTGLPECLVPLI 287

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           I+ E+ +M E + P IV++  ++L    + + ME++  GSL  +  +   +    +  + 
Sbjct: 50  ILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIA 109

Query: 96  REVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKL 130
             V++ L +L++ ++++HRDIK  NIL+   G +KL
Sbjct: 110 VAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKL 145

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCRE 97
           ++E  ++++  HPNIV  +      + +++VME +PGG     + +   DE +   + + 
Sbjct: 40  LSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKF 98

Query: 98  VLQA---LEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            L A   + +L S   IHRD+ + N L+G +  +K+S
Sbjct: 99  ALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKIS 135

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 17/113 (15%)

Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMDEGQI 91
           HPNI+N L +      L++ +EY P G+L D +                 T + +   Q+
Sbjct: 55  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 114

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
                +V + +++L   Q IHRD+ + NIL+G +   K++ +      ++Y++
Sbjct: 115 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 167

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLH 106
           + P +V    ++    +L ++++Y+ GG L T +       E ++     E++ ALE LH
Sbjct: 63  QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH 122

Query: 107 SNQVIHRDIKSDNILLGLDGSVKLS 131
              +I+RDIK +NILL  +G V L+
Sbjct: 123 KLGIIYRDIKLENILLDSNGHVVLT 147

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 11/126 (8%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
             I    S   R   K L    T   Q KKE +  E  +M    HPNIV  L   L+ E 
Sbjct: 17  TDILGPGSGPIRVAVKTLRKGATD--QEKKEFL-KEAHLMSNFNHPNIVKLLGVCLLNEP 73

Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQ--------IAAVCREVLQALEFLHSNQVIHRDIK 116
            +++ME + GG L   + +  ++           +  +C +V +   +L     IHRD+ 
Sbjct: 74  QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLA 133

Query: 117 SDNILL 122
           + N L+
Sbjct: 134 ARNCLV 139

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 8/126 (6%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVL 99
           EI +++   H  I+N + +Y     + +VM        T V     +   Q   + R +L
Sbjct: 136 EIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLL 195

Query: 100 QALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA 159
           +AL +LH   +IHRD+K++NI L    +  L  +    A KL         Y W      
Sbjct: 196 EALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFG--AACKLDAHPDTPQCYGW------ 247

Query: 160 SGTVYT 165
           SGT+ T
Sbjct: 248 SGTLET 253

Length = 392

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----TETCMDEGQIAAVCREVLQALE 103
           HP IV +  S+L  +   ++ EY  G  L   +     T   + E Q+     ++L  + 
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 104 FLHSNQVIHRDIKSDNILL 122
           ++H  +++HRD+K+ NI L
Sbjct: 121 YMHQRRILHRDLKAKNIFL 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 13/99 (13%)

Query: 40  EILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVT----------ETCMD 87
           EI ++RE KHPN+++    +L     ++W++ +Y     L  ++              + 
Sbjct: 48  EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 106

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
            G + ++  ++L  + +LH+N V+HRD+K  NIL+  +G
Sbjct: 107 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 72  LPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           + G  + D + +   D   I  V R+VL  L  LH   ++HRDIK +N+L+ +DG VK+
Sbjct: 292 MAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKI 350

Length = 507

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
           +VL A+  +HS  +IHRDIKS NILL  +G VKL     F  +K+Y
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD---FGFSKMY 193

Length = 496

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 17/114 (14%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMDEGQ 90
            HPNI+N L +      L++ +EY P G+L D +                 T + +   Q
Sbjct: 61  HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
           +     +V   +++L   Q IHRD+ + N+L+G + + K++ +      ++Y++
Sbjct: 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK 174

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 8/90 (8%)

Query: 39  NEILVMRE-NKHPNIVNYLDSYLVGEE---LWVVMEYLPGGSLTDVVT--ETCMDEGQIA 92
            EI  +R  + HPNI+  L   L   +   L +V E L   +L +++   +  + E ++ 
Sbjct: 46  REIQALRRLSPHPNILR-LIEVLFDRKTGRLALVFE-LMDMNLYELIKGRKRPLPEKRVK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +   ++L++L+ +H N + HRDIK +NIL+
Sbjct: 104 SYMYQLLKSLDHMHRNGIFHRDIKPENILI 133

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 3/89 (3%)

Query: 50  PNIVNYLDSYLVGEE-LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHS 107
           PN+V  L  Y+V E+ +++V+++  GG L + +     + E  +     E++ AL+ LH 
Sbjct: 45  PNMVC-LHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHR 103

Query: 108 NQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
             ++ RD+  +NILL   G ++L+ ++R+
Sbjct: 104 EGIVCRDLNPNNILLDDRGHIQLTYFSRW 132

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           PY + L+   AL+ I  +  P + E   +S   +DFL QC +++   R +A  LLKHP++
Sbjct: 198 PY-YDLNPMAALFRIVQDDHPPLPEG--ISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 44.7 bits (105), Expect = 4e-05
 Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 51/256 (19%)

Query: 161 GTVYTAIESSTG---------MEPKKELII--NEILVMRENKHPNIVNYLDSYLVGEELW 209
           G VY A   +TG         +EP ++  +   EI++M++ KH NIV Y  SYL  ++LW
Sbjct: 23  GDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLW 82

Query: 210 NIVNYLDSYLVGEELWYTKPIEEPS----------------NTTDEKTSTSSASPLST-- 251
             + +     + +    T P+ E                  +          A+ L T  
Sbjct: 83  ICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN 142

Query: 252 -----PPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK---NQTTP--PTGLTGSIL 301
                    +      +   R +  G    + P V   + K   NQ       G+T   L
Sbjct: 143 GHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL 202

Query: 302 EFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEE 360
             L P  +   P   +  LF+++         +N +P ++K+K K S  F  F+   L +
Sbjct: 203 AELQPPMFDLHP---MRALFLMT--------KSNFQPPKLKDKMKWSNSFHHFVKMALTK 251

Query: 361 EVETRASASLLLKHPF 376
             + R +A  LL+HPF
Sbjct: 252 NPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 26/72 (36%), Positives = 39/72 (54%)

Query: 323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 382
           L+  + L  IA ++ P + +  K S  F+DFL   L++  ETR SA+ LL+HPF+     
Sbjct: 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS 277

Query: 383 LASLTPLIMAAK 394
              L  L+  AK
Sbjct: 278 NRPLRELVAEAK 289

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 34/120 (28%), Positives = 67/120 (55%), Gaps = 16/120 (13%)

Query: 20  KILSNP---ITLAQQPKKELIINEILVMRENKHPNIVNYLD------SYLVGEELWVVME 70
           K LS P   +T A++  +EL++     M+   H NI+  L+      S    +++++VME
Sbjct: 47  KKLSRPFQNVTHAKRAYRELVL-----MKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVME 101

Query: 71  YLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            L   +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 102 -LMDANLCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 159

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 15/130 (11%)

Query: 10  FSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIV---------NYLDSYL 60
           FS+ D     ++    I L      +  + EI ++R   H NIV             +  
Sbjct: 22  FSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81

Query: 61  VGE-----ELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDI 115
           VG       +++V EY+    L +V+ +  + E        ++L+ L+++HS  V+HRD+
Sbjct: 82  VGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDL 140

Query: 116 KSDNILLGLD 125
           K  N+ +  +
Sbjct: 141 KPANVFINTE 150

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 25/84 (29%), Positives = 51/84 (60%), Gaps = 2/84 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG-EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
           E+ +++  +H NI++  D ++   E+++ V E L G  L  ++T   +++  I     ++
Sbjct: 59  ELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQI 117

Query: 99  LQALEFLHSNQVIHRDIKSDNILL 122
           L+ L+++HS  V+HRD+K  NIL+
Sbjct: 118 LRGLKYVHSAGVVHRDLKPSNILI 141

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 12/69 (17%)

Query: 159 ASGTVYTAIESSTGME------------PKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           A+  VY AI      +               + +  E+  M +  HPN+V Y  S++VG+
Sbjct: 13  ATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD 72

Query: 207 ELWNIVNYL 215
           ELW ++ YL
Sbjct: 73  ELWLVMPYL 81

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 44.2 bits (104), Expect = 6e-05
 Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           +AL+LI  N  P++K K K S+ F DF++ CL +   +R S   LLKHPF+
Sbjct: 233 RALFLIPRNPPPKLKSK-KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ------- 90
           I EI +++E +H NIV   D     + L++V EYL      D+  +  MD          
Sbjct: 49  IREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL------DLDLKKHMDSSPDFAKNPR 102

Query: 91  -IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            I     ++L+ + + HS++V+HRD+K  N+L+
Sbjct: 103 LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI 135

Length = 294

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 28/134 (20%)

Query: 40  EILVMRENKHPNIVNYLDSYLV---GEELWVVMEYLPGGSLTDVVTETCMDEGQ------ 90
           E  +M++ +H  +V     Y V    E +++V EY+  GSL D +      EG+      
Sbjct: 51  EAQIMKKLRHDKLVQL---YAVCSEEEPIYIVTEYMSKGSLLDFLKS---GEGKKLRLPQ 104

Query: 91  ---IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLYI-- 143
              +AA   ++ + + +L S   IHRD+ + NIL+G +   K++ +   R I    Y   
Sbjct: 105 LVDMAA---QIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161

Query: 144 EISKVIIYCWDWTA 157
           E +K  I    WTA
Sbjct: 162 EGAKFPI---KWTA 172

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLPGGSLTD---VVTETCMDEGQI 91
           EI ++R  KH NI+  LD     S+    ++++V E +     TD   ++    +    I
Sbjct: 53  EIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME----TDLYKLIKTQHLSNDHI 108

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
                ++L+ L+++HS  V+HRD+K  N+LL
Sbjct: 109 QYFLYQILRGLKYIHSANVLHRDLKPSNLLL 139

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEEL------WVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+ +++   H N++  LD +     L      ++V   L G  L ++V    + +  I  
Sbjct: 64  ELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTH-LMGADLNNIVKCQKLSDDHIQF 122

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL----------SKWNRFIATKLYI 143
           +  ++L+ L+++HS  +IHRD+K  NI +  D  +K+           +   ++AT+ Y 
Sbjct: 123 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWY- 181

Query: 144 EISKVIIYCW 153
             +  I+  W
Sbjct: 182 -RAPEIMLNW 190

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 43.9 bits (103), Expect = 8e-05
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           +AL+LI  N  P +K K K S+ FQ F++ CL +    R +   L+KHPF+
Sbjct: 223 RALFLIPRNPAPRLKSK-KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 15/35 (42%), Positives = 27/35 (77%)

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +++  LE LH  ++I+RD+K +N+LL  DG+V++S
Sbjct: 105 QIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRIS 139

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 43.8 bits (103), Expect = 9e-05
 Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--- 84
           + +Q + + + +E  ++    HP  VN   S+     L++V+E++ GG     +      
Sbjct: 69  IIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRF 128

Query: 85  -----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFI 137
                C    QI  +        E+L S  +++RD+K +N+LL  DG +K++ +   + +
Sbjct: 129 PNDVGCFYAAQIVLI-------FEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181

Query: 138 ATKLY 142
            T+ Y
Sbjct: 182 DTRTY 186

Length = 340

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 16  RFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVME 70
           R   K LS P       K+     E+ +++  KH N++  LD +     L       ++ 
Sbjct: 44  RVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 101

Query: 71  YLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +L G  L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 102 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 161

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 9e-05
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 63  EELWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNI 120
             L++VM+Y  GG L  +++  E  + E        E++ A++ +H    +HRDIK DN+
Sbjct: 74  NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNV 133

Query: 121 LLGLDGSVKLS 131
           LL  +G ++L+
Sbjct: 134 LLDKNGHIRLA 144

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 13/71 (18%)

Query: 159 ASGTVYTAIESSTG-------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
           + GTVY A    TG                K +    EI ++R   HPNIV  +D++   
Sbjct: 11  SFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDK 70

Query: 206 EELWNIVNYLD 216
           + L+ ++ Y +
Sbjct: 71  DHLYLVMEYCE 81

Length = 260

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI--ARPLA 384
           +A+ LI  +K P +++    S++ ++F+  CL+EE + R SA  LLK  ++K     P++
Sbjct: 209 RAMMLIPKSKPPRLEDNG-YSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPVS 267

Query: 385 SLTPLI 390
            L  LI
Sbjct: 268 ILKELI 273

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 64  ELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +L ++++Y+ GG + T +       E ++     E++ ALE LH   +++RDIK +NILL
Sbjct: 79  KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138

Query: 123 GLDGSVKLS 131
             +G V L+
Sbjct: 139 DSEGHVVLT 147

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQ 90
           + + +NE  ++ +     +V+   +Y   + L +V+  + GG L   +    E   +EG+
Sbjct: 44  ESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGR 103

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                 E+   LE LH  ++++RD+K +NILL   G +++S
Sbjct: 104 AVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 338 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 376
               + +K S+ F+  +  CL+++   R +A  LLKH F
Sbjct: 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 327 QALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
            A++ I  +K+ P I +   LS   +DF+ +CL+ +   R +A+ LL+HPF+
Sbjct: 209 AAVFKIGRSKELPPIPDH--LSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 13/53 (24%)

Query: 161 GTVYTAIESSTG------------M-EPKKELIINEILVMRENKHPNIVNYLD 200
           GTV      S G            M E +K+ +++E+ ++RE KHPNIV Y D
Sbjct: 14  GTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P L  L   +AL+ I  N  P + + E  S  F DF+ +CL ++ E R + S LL+H F+
Sbjct: 227 PPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 329 LYLIATNKKPEIKEKEKL----SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 379
           L  I     PE+K++       S+ F+DF+ QCLE++   R +   +L+HP++K 
Sbjct: 217 LSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 14  DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWV 67
           DR    K LS P       K+     E+++M+   H NI++ L+ +         +++++
Sbjct: 42  DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYL 99

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           VME L   +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D +
Sbjct: 100 VME-LMDANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 157

Query: 128 VKL 130
           +K+
Sbjct: 158 LKI 160

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEEL------WVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+ +++  KH N++  LD +     L      ++VM ++ G  L  ++    + E +I  
Sbjct: 64  ELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQF 122

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  ++L+ L+++H+  +IHRD+K  N+ +  D  +K+
Sbjct: 123 LVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKI 159

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 10/122 (8%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I E+ ++++ KH NIV   D     + L +V EYL    L   + +    ++   +    
Sbjct: 52  IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLFL 110

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN----RFIATKLYIEISKVIIY 151
            ++L+ L + H  +V+HRD+K  N+L+   G +KL+ +     + I TK Y   S  ++ 
Sbjct: 111 FQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY---SNEVVT 167

Query: 152 CW 153
            W
Sbjct: 168 LW 169

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 18/115 (15%)

Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------TDVVTET 84
           +++E+ +M+   KH NI+N L +      L+V++EY   G+L            D   +T
Sbjct: 64  LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDT 123

Query: 85  C-MDEGQIA-----AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           C + E Q+      +   +V + +E+L S + IHRD+ + N+L+  D  +K++ +
Sbjct: 124 CKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADF 178

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 15/107 (14%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---------------TET 84
           E  ++   +H NIV +      G+   +V EY+  G L   +                  
Sbjct: 58  EAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +   Q+  +  ++   + +L S   +HRD+ + N L+G D  VK+ 
Sbjct: 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG 164

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           Q  A+ +++L A+E++H  ++IHRDIK +NI L  DG + L
Sbjct: 268 QTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVL 308

Length = 501

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 10/123 (8%)

Query: 14  DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWV 67
           +R    K LS P       K+     E+++M+   H NI+  L+ +         +++++
Sbjct: 49  ERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 106

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           VME L   +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D +
Sbjct: 107 VME-LMDANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 164

Query: 128 VKL 130
           +K+
Sbjct: 165 LKI 167

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 14/71 (19%)

Query: 158 VASGT---VYTAIESSTG---------MEPKKE--LIINEILVMRENKHPNIVNYLDSYL 203
           V SGT   VY A    TG         +EP  +  LI  EI +++E KH NIV Y  SYL
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 204 VGEELWNIVNY 214
             E+LW  + Y
Sbjct: 77  SREKLWICMEY 87

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 41.8 bits (99), Expect = 3e-04
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 337 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
            P +  +E  S  F+DF+  CL+++ + R SA+ LL+HPF+K
Sbjct: 220 PPSLPAEEF-SPEFRDFISACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG---SLTDVVTETCMDEGQIAAV 94
           I E+ +++  KH NIV   D       L +V EYL       L +      M   +I   
Sbjct: 51  IREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMF 110

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN----RFIATKLYIEISKVII 150
             ++L+ L + H  +++HRD+K  N+L+   G +KL+ +     + + TK Y   S  ++
Sbjct: 111 --QLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY---SNEVV 165

Query: 151 YCW 153
             W
Sbjct: 166 TLW 168

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 18/115 (15%)

Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------------T 78
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L                  
Sbjct: 70  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNP 129

Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             V E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ +
Sbjct: 130 TQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 184

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 18/110 (16%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL------------------TDVV 81
           E  +M E  HPNIV  L      + + ++ EYL  G L                   D  
Sbjct: 57  EASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGT 116

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++ +D G    +  ++   +E+L S+  +H+D+ + NIL+G    VK+S
Sbjct: 117 VKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKIS 166

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           +    I   K P    +  +S   +D + + L ++ E R +A   L+HPF 
Sbjct: 204 ELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 29/49 (59%)

Query: 329 LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           L  I  ++ P + +  K S  F DFL  CL ++ + R +A+ LLKHPF+
Sbjct: 217 LLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 338 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL-ASLTPLI 390
            +       S+ F  F++ CL+ + E+R SAS LL H F K  +    SL  L+
Sbjct: 259 VDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRNTSLLDLL 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC---MDEGQ 90
           + + +NE  ++ +     +VN   +Y   + L +V+  + GG L   +        +E +
Sbjct: 44  ESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEER 103

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                 E+L  LE LH    ++RD+K +NILL   G +++S
Sbjct: 104 ALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRIS 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 13/58 (22%)

Query: 159 ASGTVYTAIESSTG-----------MEPKKEL--IINEILVMRENKHPNIVNYLDSYL 203
           + G+VY A++  TG            + ++EL  +  EI ++   +HPNIV Y  S  
Sbjct: 12  SFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSER 69

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 13/72 (18%)

Query: 159 ASGTVYTAIESSTG-------MEPKK------ELIINEILVMRENKHPNIVNYLDSYLVG 205
           A G VY  +   TG       +  +K      + I+ EI +++  KHPNIV Y+ S    
Sbjct: 12  AFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS 71

Query: 206 EELWNIVNYLDS 217
           + L+ I+ Y ++
Sbjct: 72  DSLYIILEYAEN 83

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETC-MDEGQI 91
           K   + E  ++++  HPNIV  +      + +++VME + GG  LT + TE   +   ++
Sbjct: 37  KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKEL 96

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +       +E+L S   IHRD+ + N L+     +K+S
Sbjct: 97  IQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKIS 136

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 38  INEILVMRENK-HPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVV-TETCMDEGQI 91
           + E+ ++R  + H NI    D  +V      EL++  E L    L  ++ +   + +   
Sbjct: 49  LRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEE-LMEADLHQIIRSGQPLTDAHF 107

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +   ++L  L+++HS  V+HRD+K  N+L+  D  +K+
Sbjct: 108 QSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKI 146

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL---TDVVTETCMDEGQI 91
           ++ +NE  ++ +     IV+   ++   ++L +VM  + GG L      V E    E + 
Sbjct: 38  QMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARA 97

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                +++  LE LH  ++++RD+K +N+LL   G+V++S
Sbjct: 98  IFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRIS 137

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 41.6 bits (97), Expect = 5e-04
 Identities = 23/97 (23%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+ +++  KH N++  LD +          E+++V   L G  L ++V    + +  +  
Sbjct: 64  ELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTN-LMGADLNNIVKCQKLSDEHVQF 122

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  ++L+ L+++HS  +IHRD+K  N+ +  D  +++
Sbjct: 123 LIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 159

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT--ETC---MDEGQIA 92
           I E  ++++ KH NIV   D     + L +V EYL     TD+    + C   +    + 
Sbjct: 51  IREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD----TDLKQYMDDCGGGLSMHNVR 106

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               ++L+ L + H  +V+HRD+K  N+L+   G +KL+
Sbjct: 107 LFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLA 145

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 41.2 bits (96), Expect = 6e-04
 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 15/100 (15%)

Query: 40  EILVMRENKHPNIVNYLDSYL-------------VGEELWVVMEYLPGGSLTDVVTETCM 86
           EI ++RE KHPN++     +L                +LW ++++           +  +
Sbjct: 48  EIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQ--L 105

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
               + ++  ++L  + +LH+N V+HRD+K  NIL+  +G
Sbjct: 106 PRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG 145

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +       +   Q+
Sbjct: 46  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL 104

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 105 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 136

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 23/115 (20%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-------TETCMDEGQIA 92
           E  +M E  HPNIV  L    VG+ + ++ EY+  G L + +         +       A
Sbjct: 58  EAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSA 117

Query: 93  AVC----------------REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             C                ++V   + +L   + +HRD+ + N L+G +  VK++
Sbjct: 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA 172

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.8 bits (95), Expect = 7e-04
 Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 18/115 (15%)

Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--------------- 80
           +++E+ +M+   KH NI+N L +      L+V++EY   G+L +                
Sbjct: 67  LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 126

Query: 81  --VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             V +  M    + +   +V + +E+L S + IHRD+ + N+L+  +  +K++ +
Sbjct: 127 ARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADF 181

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 40.7 bits (95), Expect = 7e-04
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 18/113 (15%)

Query: 37  IINEILVMR-ENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE------------ 83
           +I+E+ +M+   KH NI+N L        L+V++EY   G+L + +              
Sbjct: 64  LISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDI 123

Query: 84  TCMDEGQIA-----AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           T + E Q++     +   +V + +E+L S + IHRD+ + N+L+  D  +K++
Sbjct: 124 TKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIA 176

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 343 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
             K S  FQDF++ CL ++   R S   LL+HPF+K
Sbjct: 226 SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 40.8 bits (96), Expect = 9e-04
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 27/109 (24%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG-----GSLTDVVTETCMD------- 87
           EI ++++ KHPN+V  +D         + +E         GS+  V      D       
Sbjct: 57  EIKILKKLKHPNVVPLID---------MAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN 107

Query: 88  ------EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                 E QI     ++L+ + +LH N ++HRDIK+ NIL+   G +K+
Sbjct: 108 PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKI 156

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDE-------- 88
            +NE  VM+E    ++V  L     G+   VVME +  G L   +     +         
Sbjct: 56  FLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP 115

Query: 89  ---GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               +   +  E+   + +L + + +HRD+ + N ++  D +VK+
Sbjct: 116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 27/130 (20%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPGGSLTDVVT---ETCMDE 88
           I+ EI ++R  +HP+IV      L       ++++VV E L    L  V+    +   + 
Sbjct: 46  ILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEH 104

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK---------------- 132
            Q      ++L+AL+++H+  V HRD+K  NIL   D  +K+                  
Sbjct: 105 HQF--FLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 162

Query: 133 WNRFIATKLY 142
           W  ++AT+ Y
Sbjct: 163 WTDYVATRWY 172

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 13/107 (12%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-------------T 84
           + EI +M   K+PNI+  L   +  + L ++ EY+  G L   +++              
Sbjct: 65  LKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIP 124

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +    +  +  ++   +++L S   +HRD+ + N L+G   ++K++
Sbjct: 125 SVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIA 171

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 9/99 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEG-----QIA 92
           I E  +++  KH NIV   D     E L  V EY+     TD+        G      + 
Sbjct: 51  IREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH----TDLAQYMIQHPGGLHPYNVR 106

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               ++L+ L ++H   ++HRD+K  N+L+   G +KL+
Sbjct: 107 LFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLA 145

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEGQI 91
           E  + E  +M++ +H  +V  L + +  E +++V EY+  GSL D + +     +    +
Sbjct: 46  ESFLEEAQIMKKLRHDKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNL 104

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  +V   + ++     IHRD++S NIL+G
Sbjct: 105 VDMAAQVAAGMAYIERMNYIHRDLRSANILVG 136

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-------TCMDEGQIA 92
           E+ ++     PNI   L    V   L ++MEY+  G L   + +          +   ++
Sbjct: 69  EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS 128

Query: 93  A-----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                 +  ++   + +L S   +HRD+ + N L+G + ++K++
Sbjct: 129 FSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIA 172

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCM 86
           + +  KE I++E  VM    HP++V  L   L   ++ ++ + +P G L D V      +
Sbjct: 49  SPKANKE-ILDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYVRNHKDNI 106

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +   C ++ + + +L   +++HRD+ + N+L+     VK++
Sbjct: 107 GSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKIT 151

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--CMDEGQIAAV 94
           I + +L M    H  IV  L     G  L +V +  P GSL D V +    +D  ++   
Sbjct: 56  ITDHMLAMGSLDHAYIVRLL-GICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNW 114

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
           C ++ + + +L  ++++HR++ + NILL  D  V+++ +   +A  LY
Sbjct: 115 CVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFG--VADLLY 160

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 39.7 bits (92), Expect = 0.002
 Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEGQI 91
           E  + E  +M++ +H  +V  L + +  E +++V E++  GSL D + E     +   Q+
Sbjct: 46  EAFLQEAQIMKKLRHDKLVP-LYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQL 104

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     IHRD+++ NIL+G
Sbjct: 105 VDMAAQIADGMAYIERMNYIHRDLRAANILVG 136

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 36  LIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQIA 92
           + +NE  ++ +     +V+   +Y   + L +V+  + GG L   +        DE +  
Sbjct: 46  MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAV 105

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               E+   LE LH  ++++RD+K +NILL   G +++S
Sbjct: 106 FYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRIS 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 21/107 (19%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL-----------PGGSLTDVVTETCM 86
           I E  +++  KH NIV   D     E L +V EY+           PGG   +       
Sbjct: 51  IREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPE------- 103

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
               +     ++L+ L ++H   ++HRD+K  N+L+   G +KL+ +
Sbjct: 104 ---NVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADF 147

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 379
           + L  I   + P +   E  S  F  F+D CL ++   R     LL+HPF++ 
Sbjct: 226 EVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 12/99 (12%)

Query: 40  EILVMRENKHPNIVNYLD------SYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           E+ +++  +H N++  LD      S    ++ ++VM Y+     TD+  +    + E ++
Sbjct: 64  ELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYM----QTDLQKIMGHPLSEDKV 119

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +  ++L  L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 120 QYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKI 158

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQIAAVCR 96
           E  +M++ +HP ++       + E +++V E +  GSL + +       +   Q+  +  
Sbjct: 51  EAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAA 110

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +V   + +L +   IHRD+ + N+L+G +   K++
Sbjct: 111 QVASGMAYLEAQNYIHRDLAARNVLVGENNICKVA 145

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)

Query: 161 GTVYTAIESSTGM------------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL 208
           G VY AI+  T              E + E I  EI  + + + P I  Y  S+L G +L
Sbjct: 15  GEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKL 74

Query: 209 WNIVNYLD 216
           W I+ Y  
Sbjct: 75  WIIMEYCG 82

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 38.2 bits (90), Expect = 0.004
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 14/67 (20%)

Query: 159 ASGTVYTAIESSTG------------MEPK-KELIINEILVMRENKHPNIVNYLDSYLVG 205
           + G VY     S G            M  K +E  +NE+ ++++  HPNI+ Y +S+   
Sbjct: 12  SFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK 71

Query: 206 EELWNIV 212
            +L  IV
Sbjct: 72  GKL-CIV 77

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 327 QALYLIATNKK-PEIKEK--EKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 376
            A++ +   +  P I       LS +  DFL+ C     + R +A  LL+HPF
Sbjct: 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           VMEY+ G  L DV+ E   +      + RE+ + +  LH   ++H D+ + NI++ 
Sbjct: 75  VMEYIEGKPLKDVIEEGNDE------LLREIGRLVGKLHKAGIVHGDLTTSNIIVR 124

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 67  VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
           +VMEY+ G  L D + E   D      + REV + +  LH   ++H D+ + NI+L 
Sbjct: 76  IVMEYIEGELLKDALEEARPD------LLREVGRLVGKLHKAGIVHGDLTTSNIILS 126

Length = 204

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 10/117 (8%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++++   H NI++ L+ +         +++++VME L 
Sbjct: 52  KKLSRPFQNQTHAKRAY--RELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVME-LM 108

Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+    +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 109 DANLCQVI-HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 164

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 4/105 (3%)

Query: 32  PKKEL-IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ 90
           PK  +  ++E L+M    HP++V  L   L    + +V + +P G L D V E   + G 
Sbjct: 50  PKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLDYVHEHKDNIGS 108

Query: 91  --IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             +   C ++ + + +L   +++HRD+ + N+L+     VK++ +
Sbjct: 109 QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDF 153

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	400
KOG0578|consensus	550		100.0
KOG0615|consensus	475		100.0
KOG0581|consensus	364		100.0
KOG0575|consensus	592		100.0
KOG0593|consensus	396		100.0
KOG0659|consensus	318		100.0
KOG0598|consensus	357		100.0
KOG0577|consensus	948		100.0
KOG0201|consensus	467		100.0
KOG0582|consensus	516		100.0
KOG0595|consensus	429		100.0
KOG0616|consensus	355		100.0
KOG0600|consensus	560		100.0
KOG0198|consensus	313		100.0
KOG0583|consensus	370		100.0
KOG0592|consensus	604		100.0
KOG0588|consensus	786		100.0
KOG0660|consensus	359		100.0
KOG0574|consensus	502		100.0
KOG0610|consensus	459		100.0
KOG0591|consensus	375		100.0
KOG0661|consensus	538		100.0
KOG0033|consensus	355		100.0
KOG0597|consensus	808		100.0
KOG0605|consensus	550		100.0
KOG0579|consensus	1187		100.0
KOG0663|consensus	419		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0611|consensus	668		100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
KOG0032|consensus	382		100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0594|consensus	323		100.0
KOG0694|consensus	694		100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG0599|consensus	411		100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
KOG0585|consensus	576		100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0580|consensus	281		100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG0658|consensus	364		100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0667|consensus	586		100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG4717|consensus	864		100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0589|consensus	426		100.0
KOG0192|consensus	362		100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0584|consensus	632		100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG4645|consensus	1509		100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0666|consensus	438		100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
KOG0669|consensus	376		100.0
KOG4279|consensus	1226		100.0
KOG0587|consensus	953		100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG4236|consensus	888		100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
KOG0690|consensus	516		100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG2345|consensus	302		100.0
KOG0197|consensus	468		100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG1989|consensus	738		100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
KOG0596|consensus	677		100.0
KOG0662|consensus	292		100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG0604|consensus	400		100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG0671|consensus	415		100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG0193|consensus	678		100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
KOG4721|consensus	904		100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG1290|consensus	590		100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0612|consensus	1317		100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0983|consensus	391		100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0986|consensus	591		100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0607|consensus	463		100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.98
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.98
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.98
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.98
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.98
PLN00009	294	cyclin-dependent kinase A; Provisional	99.98
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.98
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.98
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.98
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.98
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.98
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.98
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.98
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.98
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.98
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.98
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.98
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.98
KOG0586|consensus	596		99.98
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.98
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.98
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.98
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.98
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.98
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.98
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.98
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.98
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.98
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
KOG0614|consensus	732		99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
KOG0576|consensus	829		99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
KOG1026|consensus	774		99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
KOG1035|consensus	1351		99.97
KOG0603|consensus	612		99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
KOG1006|consensus	361		99.97
KOG0670|consensus	752		99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.97
KOG0664|consensus	449		99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.97
KOG0608|consensus	1034		99.97
KOG0696|consensus	683		99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
KOG1187|consensus	361		99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
KOG0194|consensus	474		99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG4250|consensus	732		99.96
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.96
KOG1167|consensus	418		99.96
KOG2052|consensus	513		99.96
KOG1095|consensus	1025		99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG1027|consensus	903		99.96
KOG0665|consensus	369		99.96
KOG0196|consensus	996		99.96
KOG0695|consensus	593		99.96
KOG0668|consensus	338		99.95
KOG1151|consensus	775		99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
KOG1094|consensus	807		99.94
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.94
KOG4257|consensus	974		99.94
KOG0199|consensus	1039		99.94
KOG0984|consensus	282		99.93
KOG4278|consensus	1157		99.93
KOG3653|consensus	534		99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG1152|consensus	772		99.92
KOG0200|consensus	609		99.92
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.92
KOG1345|consensus	378		99.92
KOG1025|consensus	1177		99.89
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.87
KOG1165|consensus	449		99.86
KOG0590|consensus	601		99.84
KOG1163|consensus	341		99.83
PRK09188	365	serine/threonine protein kinase; Provisional	99.81
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.79
PRK10345	210	hypothetical protein; Provisional	99.78
KOG1024|consensus	563		99.77
KOG0603|consensus	612		99.77
KOG1240|consensus	1431		99.74
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.74
KOG1164|consensus	322		99.74
KOG4158|consensus	598		99.71
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.7
KOG0606|consensus	1205		99.69
PRK12274	218	serine/threonine protein kinase; Provisional	99.66
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.65
KOG1023|consensus	484		99.6
PRK14879	211	serine/threonine protein kinase; Provisional	99.59
smart00090	237	RIO RIO-like kinase.	99.58
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.56
KOG0590|consensus	601		99.56
KOG1166|consensus	974		99.56
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.54
KOG0195|consensus	448		99.52
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.48
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.46
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.46
KOG0600|consensus	560		99.43
KOG1033|consensus	516		99.42
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.36
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.34
KOG0663|consensus	419		99.2
KOG1266|consensus	458		99.18
KOG0601|consensus	524		99.09
KOG0659|consensus	318		99.06
KOG0593|consensus	396		99.03
KOG0606|consensus	1205		99.02
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.99
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.99
KOG0594|consensus	323		98.96
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.95
KOG0660|consensus	359		98.9
KOG1243|consensus	690		98.85
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.76
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.64
KOG0601|consensus	524		98.62
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.6
KOG0666|consensus	438		98.55
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.54
KOG3087|consensus	229		98.53
KOG3741|consensus	655		98.51
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.48
KOG2137|consensus	700		98.46
KOG0658|consensus	364		98.46
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.26
PRK09902	216	hypothetical protein; Provisional	98.16
KOG0669|consensus	376		98.07
KOG0578|consensus	550		97.96
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.92
KOG0576|consensus	829		97.86
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.85
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.83
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.59
COG4248	637	Uncharacterized protein with protein kinase and he	97.59
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.57
KOG0607|consensus	463		97.5
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.36
KOG0605|consensus	550		97.31
KOG0664|consensus	449		97.3
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.29
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.24
KOG0581|consensus	364		97.19
KOG2345|consensus	302		97.17
KOG0667|consensus	586		97.11
PF01636	239	APH: Phosphotransferase enzyme family This family	97.01
KOG1235|consensus	538		96.94
KOG0615|consensus	475		96.83
KOG0585|consensus	576		96.82
KOG0575|consensus	592		96.73
KOG1152|consensus	772		96.71
KOG0598|consensus	357		96.58
KOG0597|consensus	808		96.56
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	96.5
KOG1290|consensus	590		96.46
KOG0671|consensus	415		96.45
KOG1035|consensus	1351		96.37
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.31
PLN02876	822	acyl-CoA dehydrogenase	96.27
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.24
KOG1151|consensus	775		96.19
KOG4645|consensus	1509		96.12
KOG0574|consensus	502		96.05
KOG0582|consensus	516		95.83
KOG0670|consensus	752		95.81
KOG0592|consensus	604		95.74
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	95.68

>KOG0578|consensus

Probab=100.00  E-value=5.6e-50  Score=387.49  Aligned_cols=267  Identities=53%  Similarity=0.790  Sum_probs=251.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|..+.|+.+........||+|.+....+..++-+.+|+.+|+..+|+|||++++.|..++.+|+||||++||+|.+.
T Consensus       281 igqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDv  360 (550)
T KOG0578|consen  281 IGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDV  360 (550)
T ss_pred             hccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhh
Confidence            68999999999999888889999999999988889999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++.++..|+++++.||.|||.+||+|||||.+||+++.+|.+||+||| |+++ +.....              
T Consensus       361 Vt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFG-Fcaq-i~~~~~--------------  424 (550)
T KOG0578|consen  361 VTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFG-FCAQ-ISEEQS--------------  424 (550)
T ss_pred             hhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeee-eeec-cccccC--------------
Confidence            998889999999999999999999999999999999999999999999999999 7776 222222              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       425 --------------------------------------------------------------------------------  424 (550)
T KOG0578|consen  425 --------------------------------------------------------------------------------  424 (550)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               .+.+++|||-|||||++.+..|+.+.|+||+|+++.||+.|.=         ||.
T Consensus       425 -------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEP---------PYl  470 (550)
T KOG0578|consen  425 -------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEP---------PYL  470 (550)
T ss_pred             -------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCC---------Ccc
Confidence                                     3678899999999999999999999999999999999999974         777


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhc
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  398 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~  398 (400)
                      . +++.+.++.|..+..|.++.++.+|+.++||+.+||+.||++|++|.|+|+||||+.+.+.++|.+||++++++-+
T Consensus       471 n-E~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~pLi~~~~~~~~  547 (550)
T KOG0578|consen  471 N-ENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLNPLILAARKASR  547 (550)
T ss_pred             C-CChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhHHHHHHHHHhhc
Confidence            7 9999999999999999999999999999999999999999999999999999999999999999999999999865

>KOG0615|consensus

Probab=100.00  E-value=1e-48  Score=365.13  Aligned_cols=251  Identities=25%  Similarity=0.291  Sum_probs=214.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-------hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-------KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-------~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|+|+|+.|.++....+...||+|.++.+...       ....+++|+++|++|+|||||+++++|...+..|+|+||++
T Consensus       180 LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~  259 (475)
T KOG0615|consen  180 LGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVE  259 (475)
T ss_pred             ecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEec
Confidence            69999999999999999999999988754321       12235799999999999999999999999999999999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhh
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ||.|++++-. +.+.+..-+.++.|++.|+.|||+.||+||||||+||++..+   ..+||+|||  ++....       
T Consensus       260 GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG--lAK~~g-------  330 (475)
T KOG0615|consen  260 GGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG--LAKVSG-------  330 (475)
T ss_pred             CccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc--hhhccc-------
Confidence            9999998865 478888899999999999999999999999999999999877   789999999  555111       


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       331 --------------------------------------------------------------------------------  330 (475)
T KOG0615|consen  331 --------------------------------------------------------------------------------  330 (475)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcc---cCCCCccchhhhhcCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQT---TPPTGLTGSILEFLGP  306 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~d~~s~g~~~~~~~~g  306 (400)
                                                       ...--+++||||.|+|||++.......+   .|.||+||++|-+|+|
T Consensus       331 ---------------------------------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG  377 (475)
T KOG0615|consen  331 ---------------------------------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG  377 (475)
T ss_pred             ---------------------------------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc
Confidence                                             0112467899999999999998665544   4888888888888888


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      -.         ||.+...+.....+|.++.-++. .-|.++|++++|||.+||..||++|||++|+|+||||+.++-
T Consensus       378 ~p---------PFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  378 YP---------PFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             CC---------CcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence            66         99998888888889999966555 447889999999999999999999999999999999997763

>KOG0581|consensus

Probab=100.00  E-value=1.2e-45  Score=342.03  Aligned_cols=249  Identities=26%  Similarity=0.418  Sum_probs=222.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCC-EEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGE-ELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~   78 (400)
                      ||+|.-++|+++..+.+..-+|+|.+....+ ...+++.+|+++++..+|+|||++|+.|..++ .+.++||||++|+|.
T Consensus        87 lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd  166 (364)
T KOG0581|consen   87 LGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLD  166 (364)
T ss_pred             cccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHH
Confidence            6899999999999999998899999865533 35688999999999999999999999999999 599999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++++. +.+++...-.++.++++||.|||+ ++||||||||+||+++..|.+||+|||  ++..+...            
T Consensus       167 ~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFG--VS~~lvnS------------  232 (364)
T KOG0581|consen  167 DILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFG--VSGILVNS------------  232 (364)
T ss_pred             HHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccc--ccHHhhhh------------
Confidence            99985 579999999999999999999995 899999999999999999999999999  44322111            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       233 --------------------------------------------------------------------------------  232 (364)
T KOG0581|consen  233 --------------------------------------------------------------------------------  232 (364)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ..+++.||..|||||.+.+..|+..+|+||+|..++|+..|..        
T Consensus       233 -----------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Grf--------  275 (364)
T KOG0581|consen  233 -----------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRF--------  275 (364)
T ss_pred             -----------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCC--------
Confidence                                         1567899999999999999999999999999999999999988        


Q ss_pred             cCcchh----hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         317 IPYLFI----LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       317 ~P~~~~----~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                       ||...    .+..+.+..|..+.+|.++.. .+|+++++|+..||++||.+|||+.|+++|||++....
T Consensus       276 -P~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  276 -PYPPPNPPYLDIFELLCAIVDEPPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             -CCCCcCCCCCCHHHHHHHHhcCCCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence             88773    478999999999999888654 49999999999999999999999999999999997544

>KOG0575|consensus

Probab=100.00  E-value=4.1e-45  Score=356.38  Aligned_cols=245  Identities=23%  Similarity=0.365  Sum_probs=208.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccc---cCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITL---AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|.++|.+++..++..||+|++..   .....++.+.+||+|.++|+|+|||+++++|++..++|+|+|+|..++|
T Consensus        26 LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL  105 (592)
T KOG0575|consen   26 LGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSL  105 (592)
T ss_pred             eccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccH
Confidence            6999999999987755544444444432   2345678899999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++++ +.++|..++.++.||+.||.|||+++|+|||||-.|++++.+.++||+|||  +|..+..+..          
T Consensus       106 ~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFG--LAt~le~~~E----------  173 (592)
T KOG0575|consen  106 MELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFG--LATQLEYDGE----------  173 (592)
T ss_pred             HHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccc--eeeeecCccc----------
Confidence            999985 489999999999999999999999999999999999999999999999999  5543322211          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (592)
T KOG0575|consen  174 --------------------------------------------------------------------------------  173 (592)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.||||.|+|||++....++.-.|+||+||+||.||.|.=        
T Consensus       174 -----------------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~P--------  216 (592)
T KOG0575|consen  174 -----------------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRP--------  216 (592)
T ss_pred             -----------------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCC--------
Confidence                                         1457799999999999999988889999999999999999972        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                       ||.. .+-.+.+..|.... ..+  |..+|..+.|||++||+.||.+|||++++|.|+||+.
T Consensus       217 -PFet-k~vkety~~Ik~~~-Y~~--P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  217 -PFET-KTVKETYNKIKLNE-YSM--PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS  274 (592)
T ss_pred             -Cccc-chHHHHHHHHHhcC-ccc--ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence             5555 66677777776652 233  4468999999999999999999999999999999964

>KOG0593|consensus

Probab=100.00  E-value=9.9e-44  Score=319.97  Aligned_cols=192  Identities=24%  Similarity=0.374  Sum_probs=170.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|+|+.|++++++.++.-||+|++....++  ..+-.++||.+|++++|+|+|.++++|.....+++|+|||+. ++.
T Consensus        10 vGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dh-TvL   88 (396)
T KOG0593|consen   10 VGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDH-TVL   88 (396)
T ss_pred             cccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecch-HHH
Confidence            58999999999999999999999998755443  246678999999999999999999999999999999999976 665


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.+.+  +.++.+.++.+++|++.|+.|+|+++++||||||+||+++.+|.+||+|||  .|+.+.....       .++
T Consensus        89 ~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFG--FAR~L~~pgd-------~YT  159 (396)
T KOG0593|consen   89 HELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFG--FARTLSAPGD-------NYT  159 (396)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccch--hhHhhcCCcc-------hhh
Confidence            65654  369999999999999999999999999999999999999999999999999  7775553221       346


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +...|.+|+|||++.|+.                          +|....|+|.+||++.|+++|.+.|++.
T Consensus       160 DYVATRWYRaPELLvGDt--------------------------qYG~pVDiWAiGCv~aEl~~G~pL~PG~  205 (396)
T KOG0593|consen  160 DYVATRWYRAPELLVGDT--------------------------QYGKPVDIWAIGCVFAELLTGEPLWPGR  205 (396)
T ss_pred             hhhhhhhccChhhhcccC--------------------------cCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence            678899999999999998                          8999999999999999999999999873

>KOG0659|consensus

Probab=100.00  E-value=4.2e-43  Score=310.93  Aligned_cols=278  Identities=22%  Similarity=0.305  Sum_probs=215.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.|+.||++++.+++..||+|+++..+..+  .-...+||..|+.++|+||+.++++|...+.+.+|+||++. +|.
T Consensus        10 lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe   88 (318)
T KOG0659|consen   10 LGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLE   88 (318)
T ss_pred             hcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHH
Confidence            699999999999999999999999999875432  35578999999999999999999999999999999999954 999


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++..  .++..+++.++.+++.|+.|||++.|+|||+||.|++++.+|.+||+|||  +++.+.......       .
T Consensus        89 ~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFG--LAr~f~~p~~~~-------~  159 (318)
T KOG0659|consen   89 VVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFG--LARFFGSPNRIQ-------T  159 (318)
T ss_pred             HHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeeccc--chhccCCCCccc-------c
Confidence            999865  68999999999999999999999999999999999999999999999999  776554433332       2


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                      ....|.+|+|||+++|..                          .|..+.|||++||+++|++.+.+.|.+.+.-++-. 
T Consensus       160 ~~V~TRWYRAPELLfGsr--------------------------~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~-  212 (318)
T KOG0659|consen  160 HQVVTRWYRAPELLFGSR--------------------------QYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLS-  212 (318)
T ss_pred             cceeeeeccChHHhccch--------------------------hcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHH-
Confidence            337789999999999988                          89999999999999999999999987733111000 


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                      .                             .-...|||.   |+.            |                      
T Consensus       213 ~-----------------------------If~~LGTP~---~~~------------W----------------------  226 (318)
T KOG0659|consen  213 K-----------------------------IFRALGTPT---PDQ------------W----------------------  226 (318)
T ss_pred             H-----------------------------HHHHcCCCC---ccc------------C----------------------
Confidence            0                             000123332   222            2                      


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS  385 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~  385 (400)
                       |=...+.....+.   .-..+... --...+..+.||+.+||.+||-+|+|+.|+|+|+||++.+.+..
T Consensus       227 -P~~~~lpdY~~~~---~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~  292 (318)
T KOG0659|consen  227 -PEMTSLPDYVKIQ---QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTP  292 (318)
T ss_pred             -ccccccccHHHHh---cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCC
Confidence             1111111111111   11111111 01225667899999999999999999999999999998666543

>KOG0598|consensus

Probab=100.00  E-value=5.6e-43  Score=324.06  Aligned_cols=246  Identities=24%  Similarity=0.331  Sum_probs=211.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|+|+|++|+.++.+.+..-.|.|+++.+   .....+...+|..+|.+++||+||+++..|++....|+|+||+.||.|
T Consensus        33 iGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeL  112 (357)
T KOG0598|consen   33 IGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGEL  112 (357)
T ss_pred             eeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccH
Confidence            69999999999977766666666666533   223456678999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +-.+++ +.+++..++.++.+|+.||.|||+.||||||+||+|||+|.+|.++|+|||  ++.....             
T Consensus       113 f~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFg--L~k~~~~-------------  177 (357)
T KOG0598|consen  113 FYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFG--LCKEDLK-------------  177 (357)
T ss_pred             HHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccc--cchhccc-------------
Confidence            999984 589999999999999999999999999999999999999999999999999  3331100             


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (357)
T KOG0598|consen  178 --------------------------------------------------------------------------------  177 (357)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                .....+++|||+.|||||++.+..|+...|.||+|+++||||+|--        
T Consensus       178 --------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~p--------  223 (357)
T KOG0598|consen  178 --------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKP--------  223 (357)
T ss_pred             --------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCC--------
Confidence                                      0112456899999999999999999999999999999999999963        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh----cHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA----SASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~----s~~~~l~hp~~~~  379 (400)
                       ||.. .+..+....|.+++.+..  +.-++..++|||+++|..||++|.    +++++-+||||..
T Consensus       224 -PF~~-~~~~~~~~~I~~~k~~~~--p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  224 -PFYA-EDVKKMYDKILKGKLPLP--PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             -CCcC-ccHHHHHHHHhcCcCCCC--CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccccc
Confidence             7777 888888888988863333  333788999999999999999995    7899999999985

>KOG0577|consensus

Probab=100.00  E-value=1.9e-43  Score=341.49  Aligned_cols=259  Identities=31%  Similarity=0.506  Sum_probs=235.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||.+++..+...||||+++.....   .+..+.+|+..|+++.|||++.|-++|..+...|+||||| -|+.
T Consensus        34 IGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lGSA  112 (948)
T KOG0577|consen   34 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LGSA  112 (948)
T ss_pred             hcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hccH
Confidence            79999999999999999999999999876433   4577889999999999999999999999999999999999 4588


Q ss_pred             HHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++.  ..++.+..+.-|+.+.+.||.|||+++.||||||..||+++..|.+||+|||  .+.                
T Consensus       113 sDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFG--SAs----------------  174 (948)
T KOG0577|consen  113 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFG--SAS----------------  174 (948)
T ss_pred             HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeecccc--chh----------------
Confidence            88886  3579999999999999999999999999999999999999999999999999  333                


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (948)
T KOG0577|consen  175 --------------------------------------------------------------------------------  174 (948)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                 -..|.++++|||.|||||+|..-.-+.+++++            |+||+|++.
T Consensus       175 ---------------------------i~~PAnsFvGTPywMAPEVILAMDEGqYdgkv------------DvWSLGITC  215 (948)
T KOG0577|consen  175 ---------------------------IMAPANSFVGTPYWMAPEVILAMDEGQYDGKV------------DVWSLGITC  215 (948)
T ss_pred             ---------------------------hcCchhcccCCccccchhHheeccccccCCcc------------ceeeccchh
Confidence                                       01347888999999999999987777899999            999999998


Q ss_pred             ------ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchh
Q psy9736         316 ------LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL  389 (400)
Q Consensus       316 ------~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~  389 (400)
                            .+|++. ++.+..+++|.++.+|.++.. .||..+.+|++.||++-|.+|||++++|.|+|+...|++.-+.+|
T Consensus       216 IELAERkPPlFn-MNAMSALYHIAQNesPtLqs~-eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tvi~dL  293 (948)
T KOG0577|consen  216 IELAERKPPLFN-MNAMSALYHIAQNESPTLQSN-EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTVIMDL  293 (948)
T ss_pred             hhhhhcCCCccC-chHHHHHHHHHhcCCCCCCCc-hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchHHHHH
Confidence                  556666 999999999999999999855 499999999999999999999999999999999999999999999


Q ss_pred             hhhhHHHhcC
Q psy9736         390 IMAAKEAAKG  399 (400)
Q Consensus       390 ~~~~~~~~~~  399 (400)
                      |+.+|.++++
T Consensus       294 IqRTKdaVrE  303 (948)
T KOG0577|consen  294 IQRTKDAVRE  303 (948)
T ss_pred             HHHHHHHHHH
Confidence            9999999875

>KOG0201|consensus

Probab=100.00  E-value=1.3e-44  Score=340.25  Aligned_cols=265  Identities=33%  Similarity=0.497  Sum_probs=240.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|+|.|+.||++.+.++...||+|.+.+.... ..+.+++|+.+|.+++++||.++|+.|..+..+|++||||.||++.+
T Consensus        21 IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~  100 (467)
T KOG0201|consen   21 IGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLD  100 (467)
T ss_pred             ccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhh
Confidence            69999999999999999999999999987643 46889999999999999999999999999999999999999999999


Q ss_pred             HHhhcCC-CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          80 VVTETCM-DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        80 ~i~~~~l-~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      .++.+.+ .+..+..++++++.|+.|+|.++.+|||||+.||++...|.++++|||  ++..+....             
T Consensus       101 lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~Dfg--Va~ql~~~~-------------  165 (467)
T KOG0201|consen  101 LLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFG--VAGQLTNTV-------------  165 (467)
T ss_pred             hhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecc--eeeeeechh-------------
Confidence            9998755 888999999999999999999999999999999999999999999999  333121111             


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (467)
T KOG0201|consen  166 --------------------------------------------------------------------------------  165 (467)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                ..+.++.|||.|||||++....|..+.|+||+|+.+|||.+|.          |
T Consensus       166 --------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~Ge----------P  209 (467)
T KOG0201|consen  166 --------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGE----------P  209 (467)
T ss_pred             --------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCC----------C
Confidence                                      1246789999999999999888999999999999999999998          5


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhc
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  398 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~  398 (400)
                      +..+.++++.++.|.+..+|.+..  .+|+.+++|+..||.+||+.||||.++|+|+|++.+...+.|+.+|..++++-.
T Consensus       210 P~s~~hPmrvlflIpk~~PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~~~  287 (467)
T KOG0201|consen  210 PHSKLHPMRVLFLIPKSAPPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRWRV  287 (467)
T ss_pred             CCcccCcceEEEeccCCCCCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHHhh
Confidence            555599999999999999999977  699999999999999999999999999999999999999999999999998743

>KOG0582|consensus

Probab=100.00  E-value=7.5e-42  Score=321.96  Aligned_cols=257  Identities=30%  Similarity=0.472  Sum_probs=222.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchH-HHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKK-ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~-~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+...|+++.-.....+||||.++++..... ..+++|+..++.++||||++++.+|..+..+|+||.||.+|++.+
T Consensus        34 IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ld  113 (516)
T KOG0582|consen   34 IGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLD  113 (516)
T ss_pred             EeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHH
Confidence            6899999999999999999999999998875443 789999999999999999999999999999999999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..   .+++..+..++++++.||.|||++|-||||+|+.||+++.+|.++|+||| +.+. +...- .+        
T Consensus       114 Iik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFg-vsa~-l~~~G-~R--------  182 (516)
T KOG0582|consen  114 IIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFG-VSAS-LFDSG-DR--------  182 (516)
T ss_pred             HHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCce-eeee-ecccC-ce--------
Confidence            99853   69999999999999999999999999999999999999999999999999 2222 11100 00        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (516)
T KOG0582|consen  183 --------------------------------------------------------------------------------  182 (516)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                +....+++.||++|||||++..  ..|..++|+||+|+...|+..|..      
T Consensus       183 --------------------------~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~a------  230 (516)
T KOG0582|consen  183 --------------------------QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHA------  230 (516)
T ss_pred             --------------------------eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCC------
Confidence                                      0111267899999999999543  445588999999999999999998      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCC-------CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKP-------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                         ||.+ +.+++.+..-+++.+|       .......++.+++.++..||++||.+|||++++|+|+||+++..+.
T Consensus       231 ---Pf~k-~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~  303 (516)
T KOG0582|consen  231 ---PFSK-YPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE  303 (516)
T ss_pred             ---Cccc-CChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence               9999 9999999999999887       2223355888999999999999999999999999999999987765

>KOG0595|consensus

Probab=100.00  E-value=8.3e-42  Score=319.09  Aligned_cols=250  Identities=24%  Similarity=0.365  Sum_probs=217.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|.+||+++.+.....||+|.+...  .....+-+..||.+|+.++|+|||.++++...++.+|+|||||.||+|.
T Consensus        18 iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs   97 (429)
T KOG0595|consen   18 IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLS   97 (429)
T ss_pred             ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHH
Confidence            69999999999999999999999999766  3445677889999999999999999999999999999999999999999


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC------CceEEeccchhhhhhhccccchhhcc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD------GSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~------~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +++++. .+++.+++.++.||..|+++||+++||||||||+||+++..      -.+||+|||  .++.+....      
T Consensus        98 ~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG--fAR~L~~~~------  169 (429)
T KOG0595|consen   98 DYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG--FARFLQPGS------  169 (429)
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccc--hhhhCCchh------
Confidence            999876 89999999999999999999999999999999999999875      458999999  666332111      


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (429)
T KOG0595|consen  170 --------------------------------------------------------------------------------  169 (429)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        -..+.||+|.|||||++....|..+.|.||+|+++|++++|..   
T Consensus       170 ----------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~---  212 (429)
T KOG0595|consen  170 ----------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKP---  212 (429)
T ss_pred             ----------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCC---
Confidence                                              1446799999999999999999999999999999999999985   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                            ||.. .++.+.+..+-++..-....+...+....+|+...|+.+|..|.+..+-+.|+++...+.
T Consensus       213 ------Pf~a-~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~  276 (429)
T KOG0595|consen  213 ------PFDA-ETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANPQ  276 (429)
T ss_pred             ------Cccc-cCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCcc
Confidence                  6665 788888877766643222234457777889999999999999999999999999997543

>KOG0616|consensus

Probab=100.00  E-value=4.7e-42  Score=308.43  Aligned_cols=243  Identities=25%  Similarity=0.319  Sum_probs=215.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+|++|.+++.+..+...|+|.+....-   ...+...+|..+|+.+.||+++++++.|.+...+++||||.+||.|
T Consensus        52 lGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGEl  131 (355)
T KOG0616|consen   52 LGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGEL  131 (355)
T ss_pred             eccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccH
Confidence            6899999999999999999999998875532   2345577999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.++++ ++|++..++.++.||+.|++|||+.+|++||+||+||++|++|.++|+|||  .+.    ....+        
T Consensus       132 FS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFG--FAK----~v~~r--------  197 (355)
T KOG0616|consen  132 FSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFG--FAK----RVSGR--------  197 (355)
T ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEecc--ceE----EecCc--------
Confidence            999986 589999999999999999999999999999999999999999999999999  333    11111        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       198 --------------------------------------------------------------------------------  197 (355)
T KOG0616|consen  198 --------------------------------------------------------------------------------  197 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                    .-+.||||.|+|||++...+++...|.|++|+++|||+.|+-        
T Consensus       198 ------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~p--------  239 (355)
T KOG0616|consen  198 ------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYP--------  239 (355)
T ss_pred             ------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCC--------
Confidence                                          345699999999999999999999999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhh-----hcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR-----ASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R-----~s~~~~l~hp~~~~~  380 (400)
                       ||+. .+++....+|+.++-   .-|.-+++.++|||.++|+.|-.+|     ...+++..||||+.+
T Consensus       240 -PF~~-~~~~~iY~KI~~~~v---~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  240 -PFYD-DNPIQIYEKILEGKV---KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             -CCcC-CChHHHHHHHHhCcc---cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence             8888 888999999999853   3355689999999999999999999     357789999999964

>KOG0600|consensus

Probab=100.00  E-value=3e-42  Score=329.03  Aligned_cols=274  Identities=22%  Similarity=0.323  Sum_probs=215.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++++..++.-||+|++.++....  -.-..+||.||++|.|+||+++.+.....  +.+|||+|||+. +
T Consensus       125 IGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-D  203 (560)
T KOG0600|consen  125 IGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-D  203 (560)
T ss_pred             hcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-h
Confidence            699999999999999999999999999876432  24456999999999999999999988776  689999999966 9


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |..++...  .|++.+++.++.||+.||+|||.+||+|||||..|||+|.+|.+||+|||  +|+.+......      +
T Consensus       204 L~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFG--LAr~y~~~~~~------~  275 (560)
T KOG0600|consen  204 LSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFG--LARFYTPSGSA------P  275 (560)
T ss_pred             hhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecccc--ceeeccCCCCc------c
Confidence            99988875  69999999999999999999999999999999999999999999999999  77744333322      3


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                      .+..+.|.+|++||++.|..                          .|..+.|+|++||++.|+++|.+.+++....++-
T Consensus       276 ~T~rVvTLWYRpPELLLG~t--------------------------~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl  329 (560)
T KOG0600|consen  276 YTSRVVTLWYRPPELLLGAT--------------------------SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL  329 (560)
T ss_pred             cccceEEeeccChHHhcCCc--------------------------ccccceeehhhhHHHHHHHcCCCCcCCccHHHHH
Confidence            67778899999999999988                          8999999999999999999999999874432211


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ...-..||+|.   +                           ++|.   .
T Consensus       330 ------------------------------~kIfklcGSP~---e---------------------------~~W~---~  346 (560)
T KOG0600|consen  330 ------------------------------HKIFKLCGSPT---E---------------------------DYWP---V  346 (560)
T ss_pred             ------------------------------HHHHHHhCCCC---h---------------------------hccc---c
Confidence                                          11122344442   1                           1122   0


Q ss_pred             cccCcchhhcH----HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         315 FLIPYLFILSC----RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       315 ~~~P~~~~~~~----~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ...|+....-+    .+.+...          -..+++.+.+|+..||..||++|.||.++|.|+||+..+.
T Consensus       347 ~kLP~~~~~kp~~~y~r~l~E~----------~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~  408 (560)
T KOG0600|consen  347 SKLPHATIFKPQQPYKRRLRET----------FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL  408 (560)
T ss_pred             ccCCcccccCCCCcccchHHHH----------hccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence            11122221111    1112111          1236778999999999999999999999999999965443

>KOG0198|consensus

Probab=100.00  E-value=2.5e-41  Score=317.28  Aligned_cols=253  Identities=31%  Similarity=0.498  Sum_probs=206.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC--EEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE--ELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.|+++.+.+.+...|+|.+...+....+.+.+|+.+|.+++|+|||++++......  .++++|||+++|+|.
T Consensus        25 lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~  104 (313)
T KOG0198|consen   25 LGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLS  104 (313)
T ss_pred             ccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHH
Confidence            699999999999999888888999887664333567899999999999999999999754444  689999999999999


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +++.+.  .+++..++.+.+|++.||.|||++|++||||||+||+++. ++.+||+|||  ++.........        
T Consensus       105 ~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG--~a~~~~~~~~~--------  174 (313)
T KOG0198|consen  105 DLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFG--LAKKLESKGTK--------  174 (313)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCc--ccccccccccc--------
Confidence            999865  5999999999999999999999999999999999999999 7999999999  55422210000        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (313)
T KOG0198|consen  175 --------------------------------------------------------------------------------  174 (313)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                  ......+.||+.|||||++... .....+|+||+||++.||++|-.      
T Consensus       175 ----------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~------  220 (313)
T KOG0198|consen  175 ----------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKP------  220 (313)
T ss_pred             ----------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCC------
Confidence                                        0113456899999999999962 11248999999999999999965      


Q ss_pred             cccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         315 FLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                         |+.........+..+.... .|.+  +..+|..++|||++||.+||++||||+++|+|||++....
T Consensus       221 ---PW~~~~~~~~~~~~ig~~~~~P~i--p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  221 ---PWSEFFEEAEALLLIGREDSLPEI--PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ---cchhhcchHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence               6555344555556665443 4555  4458999999999999999999999999999999987554

>KOG0583|consensus

Probab=100.00  E-value=1.9e-41  Score=329.35  Aligned_cols=245  Identities=24%  Similarity=0.341  Sum_probs=210.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc----Cc-chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA----QQ-PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~----~~-~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||.|+|++|..+....++.+||+|.+..+    .. ...+.+.+|+.+++.+. |+||+++++++.+...+++||||+.|
T Consensus        25 lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~g  104 (370)
T KOG0583|consen   25 LGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSG  104 (370)
T ss_pred             ecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCC
Confidence            69999999999999988899999965543    11 23566779999999998 99999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      |+|++.+.+ +++.+..++.++.|++.|+.|||++||+||||||+||+++.+ +++||+|||  .+.... .        
T Consensus       105 GdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG--~s~~~~-~--------  173 (370)
T KOG0583|consen  105 GDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFG--LSAISP-G--------  173 (370)
T ss_pred             ccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccc--cccccC-C--------
Confidence            999999987 689999999999999999999999999999999999999999 999999999  333110 0        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (370)
T KOG0583|consen  174 --------------------------------------------------------------------------------  173 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CC-cccCCCCccchhhhhcCCCCcc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KN-QTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                    ......+.|||+.|+|||++.+.. |. ...|+||+|+++|.|++|.+  
T Consensus       174 ------------------------------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~--  221 (370)
T KOG0583|consen  174 ------------------------------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL--  221 (370)
T ss_pred             ------------------------------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC--
Confidence                                          001245679999999999999987 76 77999999999999999998  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhh-cHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL-SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~-s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                             ||.+ .+.......|.++. ..+  +..+ |..+.+|+++||..||.+|+|+.+++.||||+.
T Consensus       222 -------PF~d-~~~~~l~~ki~~~~-~~~--p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  222 -------PFDD-SNVPNLYRKIRKGE-FKI--PSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             -------CCCC-ccHHHHHHHHhcCC-ccC--CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                   9998 66666666666653 333  3335 999999999999999999999999999999997

>KOG0592|consensus

Probab=100.00  E-value=1.2e-41  Score=327.39  Aligned_cols=259  Identities=23%  Similarity=0.352  Sum_probs=217.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+|.+|+++++..+...+|+|++...   .+...+.+..|-++|.+| .|+.|+++|..|+++..+|+|+||+++|+
T Consensus        81 lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGd  160 (604)
T KOG0592|consen   81 LGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGD  160 (604)
T ss_pred             eccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCc
Confidence            69999999999999888888888887532   122335577899999999 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.++|.. +.|++.-.+.++.+|+.||+|||++|||||||||+|||+|.+|.++|+|||  .|..+........      
T Consensus       161 ll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFG--sAK~l~~~~~~~~------  232 (604)
T KOG0592|consen  161 LLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFG--SAKILSPSQKSQE------  232 (604)
T ss_pred             HHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecc--ccccCChhhcccc------
Confidence            9999986 579999999999999999999999999999999999999999999999999  6665544433220      


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                        .      +..    
T Consensus       233 ------------------------------------------------------------------~------~~~----  236 (604)
T KOG0592|consen  233 ------------------------------------------------------------------N------PVD----  236 (604)
T ss_pred             ------------------------------------------------------------------C------ccC----
Confidence                                                                              0      000    


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                              ..+....+.+++||-.|++||++.+...+..+|.|++||++|.|+.|--       
T Consensus       237 ------------------------~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~P-------  285 (604)
T KOG0592|consen  237 ------------------------PNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQP-------  285 (604)
T ss_pred             ------------------------cccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCC-------
Confidence                                    0000112578999999999999999988899999999999999999973       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                        ||.. .+....+.+|+.-.-+   -+..+++.+.|||+++|..||++|+|+.++.+||||..+
T Consensus       286 --PFra-~NeyliFqkI~~l~y~---fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  286 --PFRA-ANEYLIFQKIQALDYE---FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             --CCcc-ccHHHHHHHHHHhccc---CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence              6666 8888888888876422   245578899999999999999999999999999999864

>KOG0588|consensus

Probab=100.00  E-value=2.4e-41  Score=331.46  Aligned_cols=247  Identities=22%  Similarity=0.324  Sum_probs=217.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+.+.|.+++...++..+|+|++..+..   .....+.+||.+|+-+.|+|++++|++|.+..++|+|.||+++|.|
T Consensus        20 LG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGEL   99 (786)
T KOG0588|consen   20 LGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGEL   99 (786)
T ss_pred             ccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchh
Confidence            6999999999999999999999999876622   2235688999999999999999999999999999999999999999


Q ss_pred             HHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++++- .+++++..+.++++||+.|+.|||..+|+|||+||+|+++|..+++||+|||  .|..-   ..          
T Consensus       100 Fdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFG--MAsLe---~~----------  164 (786)
T KOG0588|consen  100 FDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFG--MASLE---VP----------  164 (786)
T ss_pred             HHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccc--eeecc---cC----------
Confidence            99875 5689999999999999999999999999999999999999999999999999  33300   00          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (786)
T KOG0588|consen  165 --------------------------------------------------------------------------------  164 (786)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                 ..-..+.||+|+|.+||++.+.+|. ..+|+||.|+|+|.||+|..       
T Consensus       165 ---------------------------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L-------  210 (786)
T KOG0588|consen  165 ---------------------------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL-------  210 (786)
T ss_pred             ---------------------------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC-------
Confidence                                       0114566999999999999999998 68999999999999999998       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                        ||.+ ++-...+-++.+|.-   ..|.++|++++|||++||+.||++|+|.+|+++|||+..-..
T Consensus       211 --PFdD-dNir~LLlKV~~G~f---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  211 --PFDD-DNIRVLLLKVQRGVF---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             --CCCC-ccHHHHHHHHHcCcc---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence              9986 888888888888853   335679999999999999999999999999999999997444

>KOG0660|consensus

Probab=100.00  E-value=4.7e-42  Score=316.82  Aligned_cols=277  Identities=21%  Similarity=0.280  Sum_probs=218.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccc--ccCcchHHHHHHHHHHHHhCCCCCcccccceeEe-----CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPIT--LAQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~--~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~~~~lv~e~~~   73 (400)
                      +|.|+|+.|+++.+..++.+||+|++.  +......++..+|+.+|+.++|+||+.+.+++..     -..+|+|+|+| 
T Consensus        30 iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-  108 (359)
T KOG0660|consen   30 IGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-  108 (359)
T ss_pred             ccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-
Confidence            699999999999999999999999998  6677778889999999999999999999998875     24799999999 


Q ss_pred             CCChHHHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ..+|...++.+. +++..++.+++|++.||.|+|+.+++|||+||.|++++.++.+||+|||  +|+.....     ...
T Consensus       109 etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFG--LAR~~~~~-----~~~  181 (359)
T KOG0660|consen  109 ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFG--LARYLDKF-----FED  181 (359)
T ss_pred             hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccc--ceeecccc-----Ccc
Confidence            669999999875 9999999999999999999999999999999999999999999999999  77755433     223


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                      ...+....|.+|+|||++..-.                          .|....||||+||+++|+|+|.+.|.+...-.
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~--------------------------~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~  235 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSS--------------------------EYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH  235 (359)
T ss_pred             cchhcceeeeeecCHHHHhccc--------------------------cccchhhhhhhhHHHHHHHcCCCCCCCCchHH
Confidence            3567788999999999998877                          89999999999999999999999998743211


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    +..-.....|||   ++|.+..-    .++                    
T Consensus       236 ------------------------------Ql~lI~~~lGtP---~~e~l~~i----~s~--------------------  258 (359)
T KOG0660|consen  236 ------------------------------QLQLILELLGTP---SEEDLQKI----RSE--------------------  258 (359)
T ss_pred             ------------------------------HHHHHHHhcCCC---CHHHHHHh----ccH--------------------
Confidence                                          111122234444   24433321    000                    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                                 .....+.......+.. ..--.+.++.+.||+++||..||.+|+|++|+|+|||+..
T Consensus       259 -----------~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  259 -----------KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             -----------HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence                       0011111111111111 1111346778999999999999999999999999999986

>KOG0574|consensus

Probab=100.00  E-value=2.8e-42  Score=310.19  Aligned_cols=263  Identities=30%  Similarity=0.453  Sum_probs=239.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+|+.|+++..++.+..||+|++..+.  +.+.+.+||.++++.+.+++|++|+.|.....+|+|||||..|++.+.
T Consensus        41 LGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI  118 (502)
T KOG0574|consen   41 LGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDI  118 (502)
T ss_pred             hcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHH
Confidence            699999999999999999999999997654  456789999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      ++.  .++.+..+..+++..+.||.|||...-+|||||..||+++.+|..+++|||  ++..+.+               
T Consensus       119 ~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFG--VAGQLTD---------------  181 (502)
T KOG0574|consen  119 MRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFG--VAGQLTD---------------  181 (502)
T ss_pred             HHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhcc--ccchhhh---------------
Confidence            874  489999999999999999999999999999999999999999999999999  5543322               


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (502)
T KOG0574|consen  182 --------------------------------------------------------------------------------  181 (502)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                              .+..+++..|||.|||||++.+-.|....|+||+|+...||..|.-         |
T Consensus       182 ------------------------TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~P---------P  228 (502)
T KOG0574|consen  182 ------------------------TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRP---------P  228 (502)
T ss_pred             ------------------------hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCC---------C
Confidence                                    2344788999999999999999988888899999999999988873         5


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHH
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  396 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~  396 (400)
                      |.+ -++++..+-|..+.+|.++.|+.||..+.||+++||-++|++|.|+.++++|||++++..-+-|..||..|-+.
T Consensus       229 YsD-IHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~~~I~~A~e~  305 (502)
T KOG0574|consen  229 YSD-IHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQLMIQDAQEK  305 (502)
T ss_pred             ccc-ccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHHHHHHHHHHH
Confidence            554 89999999999999999999999999999999999999999999999999999999999999999999988664

>KOG0610|consensus

Probab=100.00  E-value=3.6e-40  Score=308.24  Aligned_cols=301  Identities=20%  Similarity=0.246  Sum_probs=219.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|..++||+++...+....|+|++...   ......+++.|.+||+.++||.++.+|..|+++...|++||||+||+|
T Consensus        85 LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL  164 (459)
T KOG0610|consen   85 LGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDL  164 (459)
T ss_pred             cCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccH
Confidence            69999999999876665445555554322   234557788999999999999999999999999999999999999999


Q ss_pred             HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ..+.+.+   .|++..++.++.+++.||+|||-.|||+|||||+||++-.+|.+.|+||.  +........+-.  .   
T Consensus       165 ~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFD--LS~~~~~~Pt~~--~---  237 (459)
T KOG0610|consen  165 HSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFD--LSLRCPVSPTLV--K---  237 (459)
T ss_pred             HHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeecc--ccccCCCCCeee--c---
Confidence            9888754   69999999999999999999999999999999999999999999999999  332221000000  0   


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                               -..|+.-.+ .++                          ...   -...+.....+.+             
T Consensus       238 ---------s~~~~~~~~-~~~--------------------------~~~---~~~s~f~~r~~~~-------------  265 (459)
T KOG0610|consen  238 ---------SSSPRSSGS-QPS--------------------------CRS---RQPSCFSPRCLSS-------------  265 (459)
T ss_pred             ---------cCCCCCCCC-Ccc--------------------------ccc---ccccccccchhcc-------------
Confidence                     000000000 000                          000   0000000000000             


Q ss_pred             CccccccccCCCCCCCCCCCCCCCC---CCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQP---PPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                      .+...+         ++-......|   ........++++||..|+|||+|.++..+...|.|++|+.+||||.|--   
T Consensus       266 ~~~~~k---------~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~T---  333 (459)
T KOG0610|consen  266 SKKRKK---------KDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTT---  333 (459)
T ss_pred             cccccc---------ccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCC---
Confidence            000000         0000000111   1233356788999999999999999999899999999999999999987   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc----HHHHhcCcccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS----ASLLLKHPFLKIA  380 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~~~l~hp~~~~~  380 (400)
                            ||-+ .+..+.+.+|+.....+...+ ..+..++|||+++|.+||.+|..    |+|+-+||||+.+
T Consensus       334 ------PFKG-~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  334 ------PFKG-SNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             ------CcCC-CCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence                  9988 888999999988865444333 57889999999999999999999    9999999999974

>KOG0591|consensus

Probab=100.00  E-value=1e-41  Score=304.17  Aligned_cols=236  Identities=22%  Similarity=0.319  Sum_probs=206.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccc-eeEeCCE-EEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~-~~~~~~~-~~lv~e~~~~~~   76 (400)
                      ||+|.|+.|+++....++..||.|.++...  ...++....|+.+|++|+|+|||++++ .|..+.. ++++||||.+|+
T Consensus        27 IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GD  106 (375)
T KOG0591|consen   27 IGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGD  106 (375)
T ss_pred             HcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccC
Confidence            699999999999999999999999999664  344567889999999999999999998 5666655 899999999999


Q ss_pred             hHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh--CC--eecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          77 LTDVVTE-----TCMDEGQIAAVCREVLQALEFLHS--NQ--VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        77 L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~--~~--ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      |..+|+.     ..+++.+++.++.|++.||.+||.  ..  |.||||||.||+++.+|.+||+|||  +++-+....+ 
T Consensus       107 LsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG--L~r~l~s~~t-  183 (375)
T KOG0591|consen  107 LSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG--LGRFLSSKTT-  183 (375)
T ss_pred             HHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch--hHhHhcchhH-
Confidence            9999974     369999999999999999999998  34  8999999999999999999999999  6663332222 


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (375)
T KOG0591|consen  184 --------------------------------------------------------------------------------  183 (375)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                            ...+.+|||.||+||.+.+.+|..++|+||+||++|||+...
T Consensus       184 --------------------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~  225 (375)
T KOG0591|consen  184 --------------------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ  225 (375)
T ss_pred             --------------------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC
Confidence                                                  134568999999999999999999999999999999999887


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      -         ||++ .+-.+.-.+|-++.-+.+++ .-+|..+..+|..|+..||+.||+.
T Consensus       226 ~---------PF~g-~n~~~L~~KI~qgd~~~~p~-~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  226 S---------PFYG-DNLLSLCKKIEQGDYPPLPD-EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             C---------Cccc-ccHHHHHHHHHcCCCCCCcH-HHhhhHHHHHHHHHccCCcccCCCc
Confidence            5         9998 58888888888887666653 3489999999999999999999996

>KOG0661|consensus

Probab=100.00  E-value=5.1e-41  Score=318.49  Aligned_cols=249  Identities=20%  Similarity=0.325  Sum_probs=205.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHH--HHHHHHHHhCC-CCCcccccceeEeCC-EEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELI--INEILVMRENK-HPNIVNYLDSYLVGE-ELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~--~~Ei~~l~~l~-h~niv~~~~~~~~~~-~~~lv~e~~~~~~   76 (400)
                      +|.|+|+.|++++..+.+..||+|.++..-. .+++.  ++|+.-|+++. |+||+++.+++.+.+ .+++||||| ..+
T Consensus        18 lGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~M-d~N   95 (538)
T KOG0661|consen   18 LGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFM-DCN   95 (538)
T ss_pred             hcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhh-hhh
Confidence            6999999999999999999999999975432 23332  58999999998 999999999998877 999999999 559


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |+++++.+  .|++..++.|+.||++||.|+|.+|+.|||+||+||++.....+||+|||  +|+..             
T Consensus        96 LYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFG--LARev-------------  160 (538)
T KOG0661|consen   96 LYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFG--LAREV-------------  160 (538)
T ss_pred             HHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccc--ccccc-------------
Confidence            99999854  79999999999999999999999999999999999999989999999999  55511             


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (538)
T KOG0661|consen  161 --------------------------------------------------------------------------------  160 (538)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                 .+.+|++..+.|.+|+|||++++..++ ...|+|++|||++|+.+..      
T Consensus       161 ---------------------------~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLr------  207 (538)
T KOG0661|consen  161 ---------------------------RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLR------  207 (538)
T ss_pred             ---------------------------ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhc------
Confidence                                       123457777899999999999987655 5678888888888886665      


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--CC-------------------CCcc-----h-hhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--KK-------------------PEIK-----E-KEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--~~-------------------~~~~-----~-~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                          |.+.+.+..+++++|..-  .+                   |...     . -.++++++.+||.+||..||++||
T Consensus       208 ----PLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRp  283 (538)
T KOG0661|consen  208 ----PLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRP  283 (538)
T ss_pred             ----ccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCc
Confidence                666667777777777422  11                   1100     0 022667899999999999999999


Q ss_pred             cHHHHhcCccccccCCC
Q psy9736         367 SASLLLKHPFLKIARPL  383 (400)
Q Consensus       367 s~~~~l~hp~~~~~~~~  383 (400)
                      ||.++|+||||+...+.
T Consensus       284 TA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  284 TASQALQHPFFQVGRAS  300 (538)
T ss_pred             cHHHHhcCccccccccc
Confidence            99999999999976553

>KOG0033|consensus

Probab=100.00  E-value=2e-41  Score=297.01  Aligned_cols=248  Identities=20%  Similarity=0.252  Sum_probs=211.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|.|+.|++.-...++.+.++|.++...  ...-+.+.+|+.|.+.|+||||+++.+.+...+..|+|+|++.|++|.
T Consensus        19 igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~   98 (355)
T KOG0033|consen   19 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF   98 (355)
T ss_pred             HccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHH
Confidence            689999999988888888888888876542  225577899999999999999999999999999999999999999997


Q ss_pred             HHH-hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVV-TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .-| ++..+++..+..+++||+.+|.|+|.++|||||+||+|+++.+.   .-+|++|||  ++...+    ..      
T Consensus        99 ~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FG--vAi~l~----~g------  166 (355)
T KOG0033|consen   99 EDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFG--LAIEVN----DG------  166 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccc--eEEEeC----Cc------
Confidence            544 55578999999999999999999999999999999999999654   458999999  554332    11      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                          ..          
T Consensus       167 --------------------------------------------------------------------~~----------  168 (355)
T KOG0033|consen  167 --------------------------------------------------------------------EA----------  168 (355)
T ss_pred             --------------------------------------------------------------------cc----------
Confidence                                                                                00          


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                      .--+.|||+|||||++...+|+...|+|+.|+++|-+|.|--      
T Consensus       169 --------------------------------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~------  210 (355)
T KOG0033|consen  169 --------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP------  210 (355)
T ss_pred             --------------------------------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC------
Confidence                                            112379999999999999999999999999999999999976      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                         ||++ ++..+.+.+|.++.- ..-+.+.++++++++|+++||..||++|+|+.|+|+|||+.+.
T Consensus       211 ---PF~~-~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  211 ---PFWD-EDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             ---CCCC-ccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence               8888 788888888887733 2333577899999999999999999999999999999999963

>KOG0597|consensus

Probab=100.00  E-value=2.4e-40  Score=318.93  Aligned_cols=245  Identities=26%  Similarity=0.397  Sum_probs=213.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|+|++||+++.+.+...||+|.+....+  ++.+.+.+|++|++.++|+||+.++++|++..++|+|+|||.| +|.
T Consensus        10 iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~   88 (808)
T KOG0597|consen   10 IGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLF   88 (808)
T ss_pred             hcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHH
Confidence            6999999999999999999999999875543  3356689999999999999999999999999999999999977 999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .++.. +.++++.++.++.+++.||.|||+.+|+|||+||.||+++..|.+|++|||  +|+..+.....          
T Consensus        89 ~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg--~Ar~m~~~t~v----------  156 (808)
T KOG0597|consen   89 TILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFG--LARAMSTNTSV----------  156 (808)
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhh--hhhhcccCcee----------
Confidence            99975 589999999999999999999999999999999999999999999999999  66633221110          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (808)
T KOG0597|consen  157 --------------------------------------------------------------------------------  156 (808)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                   .+...|||.|||||++.+.+|...+|.||+||++||+++|.=         
T Consensus       157 -----------------------------ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~P---------  198 (808)
T KOG0597|consen  157 -----------------------------LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQP---------  198 (808)
T ss_pred             -----------------------------eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCC---------
Confidence                                         234579999999999999999999999999999999999974         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ||+. .+-......|.+....   .+.+.|..+..|++++|.+||..|.|..+++.|||.+..
T Consensus       199 PF~a-~si~~Lv~~I~~d~v~---~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  199 PFYA-RSITQLVKSILKDPVK---PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             CchH-HHHHHHHHHHhcCCCC---CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence            7766 6666667677766432   244689999999999999999999999999999999864

>KOG0605|consensus

Probab=100.00  E-value=6.9e-40  Score=315.32  Aligned_cols=293  Identities=20%  Similarity=0.215  Sum_probs=213.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|++++.+.++..+|+|+++...   ..+.+-++.|-++|....+++||++|.+|++...+||||||++||++
T Consensus       149 IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~  228 (550)
T KOG0605|consen  149 IGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDM  228 (550)
T ss_pred             eccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccH
Confidence            699999999999877777777777765332   23446678999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++.+ +.|++..+++++.+++.|++-+|+.|+|||||||+|+|+|..|.+||+|||+ +.............   ...
T Consensus       229 mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGL-s~gl~~~~~~~~~~---~~~  304 (550)
T KOG0605|consen  229 MTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGL-STGLDKKHRIESYR---LDE  304 (550)
T ss_pred             HHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccc-cchhhhhhhhhhhc---chh
Confidence            998875 5899999999999999999999999999999999999999999999999993 22211111110000   000


Q ss_pred             cccccceeeehhhccC-CCCc-hHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         157 AVASGTVYTAIESSTG-MEPK-KELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                      ...-......|..+.. ..+. .........+++.+                                            
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~n--------------------------------------------  340 (550)
T KOG0605|consen  305 QMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRN--------------------------------------------  340 (550)
T ss_pred             hhhhhhccCCCccccccccccchhhHHHHHHHHHhh--------------------------------------------
Confidence            0000000000000000 0000 00000000000000                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                  .+....+.+|||.|||||++.+..|+..-|.||+||||||||.|-=      
T Consensus       341 ----------------------------rr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyP------  386 (550)
T KOG0605|consen  341 ----------------------------RRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYP------  386 (550)
T ss_pred             ----------------------------hhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCC------
Confidence                                        1122344699999999999999999999999999999999999952      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                         ||.. +++.+...+|..-.. -..+....++.+++|||.+||. ||++|.-   ++|+.+||||+.+
T Consensus       387 ---PF~s-~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  387 ---PFCS-ETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             ---CCCC-CCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence               6666 899888888876532 1233345578899999999999 9999986   8999999999964

>KOG0579|consensus

Probab=100.00  E-value=1.2e-40  Score=324.06  Aligned_cols=266  Identities=29%  Similarity=0.473  Sum_probs=232.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||-|.|++|+++.++.+..-.|.|++...+....+.++-||+||..++||+||++++.|..++.+|++.|||.||.+...
T Consensus        40 LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDai  119 (1187)
T KOG0579|consen   40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAI  119 (1187)
T ss_pred             hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHH
Confidence            68999999999999999888899999888877889999999999999999999999999999999999999999888776


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +-.  +.+++.++.-+++|++.||+|||+++|||||+|..||++..+|.++|+|||  +..+.....             
T Consensus       120 mlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFG--VSAKn~~t~-------------  184 (1187)
T KOG0579|consen  120 MLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFG--VSAKNKSTR-------------  184 (1187)
T ss_pred             HHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeeccc--ccccchhHH-------------
Confidence            653  479999999999999999999999999999999999999999999999999  332111111             


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (1187)
T KOG0579|consen  185 --------------------------------------------------------------------------------  184 (1187)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                ..+.++.|||.|||||++.     +.+|.-++|+||+|+.+.||..+.      
T Consensus       185 --------------------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiE------  232 (1187)
T KOG0579|consen  185 --------------------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIE------  232 (1187)
T ss_pred             --------------------------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccC------
Confidence                                      1255679999999999875     355555566666666666666665      


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          |+..+.++++.+-.|.+..+|.+--|..|+.++.||+.+||.+||..||+++++|+|||++++.++.-+..||-.+
T Consensus       233 ----PPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~ireLlAEa  308 (1187)
T KOG0579|consen  233 ----PPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMIRELLAEA  308 (1187)
T ss_pred             ----CCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHHHHHHHHH
Confidence                7777799999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             HHHh
Q psy9736         394 KEAA  397 (400)
Q Consensus       394 ~~~~  397 (400)
                      |.-+
T Consensus       309 kAeV  312 (1187)
T KOG0579|consen  309 KAEV  312 (1187)
T ss_pred             HHHH
Confidence            7554

>KOG0663|consensus

Probab=100.00  E-value=5.9e-40  Score=299.15  Aligned_cols=193  Identities=21%  Similarity=0.404  Sum_probs=170.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchH--HHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKK--ELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~--~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      |+.|+|+.||++++.++..-||+|+++...+...  =.-++||.+|.+.+|+|||.+-++....  +.+|+|||||+. +
T Consensus        84 I~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-D  162 (419)
T KOG0663|consen   84 IEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-D  162 (419)
T ss_pred             cccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-h
Confidence            5789999999999999999999999987654321  1236899999999999999999887753  579999999966 8


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |..++..  .+|....++.++.|++.|+.|||...|+|||+||+|+++...|.+||+|||  +|+.++....       .
T Consensus       163 Lksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFG--LAR~ygsp~k-------~  233 (419)
T KOG0663|consen  163 LKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFG--LAREYGSPLK-------P  233 (419)
T ss_pred             HHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccc--hhhhhcCCcc-------c
Confidence            8888875  379999999999999999999999999999999999999999999999999  8886665533       2


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      .+....|.+|+|||++.|..                          .|....||||+||++.|++++.+.|.+.+
T Consensus       234 ~T~lVVTLWYRaPELLLG~~--------------------------tyst~iDMWSvGCI~aE~l~~kPlf~G~s  282 (419)
T KOG0663|consen  234 YTPLVVTLWYRAPELLLGAK--------------------------TYSTAVDMWSVGCIFAELLTQKPLFPGKS  282 (419)
T ss_pred             CcceEEEeeecCHHHhcCCc--------------------------ccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence            46778899999999999988                          89999999999999999999999998754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=9.3e-39  Score=307.76  Aligned_cols=246  Identities=20%  Similarity=0.287  Sum_probs=204.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.|+.||++.+......+|+|.+....   ....+.+.+|+.++++++|+||+++++++..++..|+||||+++++|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L   82 (323)
T cd05571           3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcH
Confidence            699999999999888877888888775332   22345678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+.+.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.....    .        
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG--~a~~~~~----~--------  148 (323)
T cd05571          83 FFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIS----D--------  148 (323)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCC--CCccccc----C--------
Confidence            988865 478999999999999999999999999999999999999999999999999  3331000    0        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (323)
T cd05571         149 --------------------------------------------------------------------------------  148 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......+||+.|+|||++.+..++..+|.||+|+++|||++|..        
T Consensus       149 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~--------  193 (323)
T cd05571         149 ---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--------  193 (323)
T ss_pred             ---------------------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCC--------
Confidence                                       000123468999999999999888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||.. .+.......+..+. ..+  +..++..+.+||.+||+.||++||     ++.++++||||...
T Consensus       194 -Pf~~-~~~~~~~~~~~~~~-~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         194 -PFYN-QDHEKLFELILMEE-IRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             -CCCC-CCHHHHHHHHHcCC-CCC--CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence             8876 44445555554443 222  345788999999999999999999     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0611|consensus

Probab=100.00  E-value=1.6e-38  Score=295.75  Aligned_cols=242  Identities=19%  Similarity=0.272  Sum_probs=210.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|.|++|.++....++..||+|.+....   ..+.-.+.+||+||..|+|+||+.+|++|++.+.+.+||||..+|.|
T Consensus        61 LGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeL  140 (668)
T KOG0611|consen   61 LGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGEL  140 (668)
T ss_pred             hcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccH
Confidence            699999999999999999999999887543   33445578999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++++.+ +.+++...+.+++||+.|+.|||.++++|||+|.+||++|.+++++|+|||  +.-    -..          
T Consensus       141 YDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFG--LSN----ly~----------  204 (668)
T KOG0611|consen  141 YDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFG--LSN----LYA----------  204 (668)
T ss_pred             HHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccc--hhh----hhc----------
Confidence            999986 479999999999999999999999999999999999999999999999999  322    110          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                     .+                               
T Consensus       205 -----------------------------------------------~~-------------------------------  206 (668)
T KOG0611|consen  205 -----------------------------------------------DK-------------------------------  206 (668)
T ss_pred             -----------------------------------------------cc-------------------------------
Confidence                                                           00                               


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ....++||+|.|.+||++++.+|. +-.|.|++|+++|.+..|-+       
T Consensus       207 ----------------------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM-------  251 (668)
T KOG0611|consen  207 ----------------------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM-------  251 (668)
T ss_pred             ----------------------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc-------
Confidence                                        115678999999999999999998 67899999999999999999       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                        ||.+ -+......+|.++.-..   +. -+..+.-||+-||..||++|.|++++.+|=|+.
T Consensus       252 --PFDG-~Dhk~lvrQIs~GaYrE---P~-~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  252 --PFDG-RDHKRLVRQISRGAYRE---PE-TPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             --ccCC-chHHHHHHHhhcccccC---CC-CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence              9988 67777888888873222   11 234688999999999999999999999999886

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-38  Score=306.01  Aligned_cols=243  Identities=20%  Similarity=0.266  Sum_probs=204.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+++.||++.+......||+|.+....   ....+.+.+|+.++++++|+||+++++++..++..+++|||+.+++|
T Consensus        26 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  105 (329)
T PTZ00263         26 LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGEL  105 (329)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChH
Confidence            589999999999888777888888775332   12345688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+.+... .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+....    ..        
T Consensus       106 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg--~~~~~~----~~--------  171 (329)
T PTZ00263        106 FTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFG--FAKKVP----DR--------  171 (329)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeecc--CceEcC----CC--------
Confidence            9988754 68999999999999999999999999999999999999999999999999  332110    00        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (329)
T PTZ00263        172 --------------------------------------------------------------------------------  171 (329)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                    ..+..||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       172 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~--------  213 (329)
T PTZ00263        172 ------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYP--------  213 (329)
T ss_pred             ------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCC--------
Confidence                                          112368899999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                       ||.. .++.+....+..+.. .+  +..++..+.+||++||+.||++|++     ++++++||||...
T Consensus       214 -pf~~-~~~~~~~~~i~~~~~-~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        214 -PFFD-DTPFRIYEKILAGRL-KF--PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             -CCCC-CCHHHHHHHHhcCCc-CC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence             8876 666666666666532 22  3347788999999999999999997     7999999999863

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-38  Score=301.50  Aligned_cols=246  Identities=22%  Similarity=0.258  Sum_probs=204.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+...   .....+.+.+|+.++++++|+||+++++++..++..+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999988877778888877532   222345678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+.+.. +.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++.......           
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg--~~~~~~~~~-----------  147 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFG--LCKLNMKDD-----------  147 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECc--ccccCccCC-----------
Confidence            998865 479999999999999999999999999999999999999999999999999  332100000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (312)
T cd05585         148 --------------------------------------------------------------------------------  147 (312)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       148 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~--------  191 (312)
T cd05585         148 ----------------------------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLP--------  191 (312)
T ss_pred             ----------------------------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCC--------
Confidence                                        00123468999999999999888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh---cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+..+.. .+  +..+++.+.+||.+||+.||++||   ++.++++||||...
T Consensus       192 -pf~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         192 -PFYD-ENVNEMYRKILQEPL-RF--PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             -CcCC-CCHHHHHHHHHcCCC-CC--CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence             8876 555555556655432 22  345788999999999999999997   58999999999974

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-38  Score=301.16  Aligned_cols=242  Identities=25%  Similarity=0.296  Sum_probs=204.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||++.+......||+|.+....   ....+.+.+|+.++++++|+||+++++++.++...+++|||+++++|
T Consensus         9 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L   88 (291)
T cd05612           9 VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGEL   88 (291)
T ss_pred             eecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCH
Confidence            689999999999988888889999875432   12345688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++.....    .        
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg--~~~~~~~----~--------  154 (291)
T cd05612          89 FSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFG--FAKKLRD----R--------  154 (291)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecC--cchhccC----C--------
Confidence            9988754 68999999999999999999999999999999999999999999999999  3331100    0        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (291)
T cd05612         155 --------------------------------------------------------------------------------  154 (291)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                    .....||+.|+|||++.+..+...+|+||+|+++|+|++|..        
T Consensus       155 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~--------  196 (291)
T cd05612         155 ------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYP--------  196 (291)
T ss_pred             ------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC--------
Confidence                                          112368889999999988888888999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~  379 (400)
                       ||.. .+.......+..+... +  +..++..+.+||++||+.||++|++     ++++++||||+.
T Consensus       197 -pf~~-~~~~~~~~~i~~~~~~-~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         197 -PFFD-DNPFGIYEKILAGKLE-F--PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             -CCCC-CCHHHHHHHHHhCCcC-C--CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence             8876 5666666666665432 2  3346788999999999999999995     999999999975

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=5.2e-38  Score=298.83  Aligned_cols=268  Identities=58%  Similarity=0.843  Sum_probs=229.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.+|.+.+......|++|.+........+.+.+|+.+++.++|+||+++++++..+...++++||+++++|..+
T Consensus        27 lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (296)
T cd06655          27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV  106 (296)
T ss_pred             EecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHH
Confidence            57899999999988888888999988766655667889999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........              
T Consensus       107 ~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg--~~~~~~~~~~--------------  170 (296)
T cd06655         107 VTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFG--FCAQITPEQS--------------  170 (296)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCc--cchhcccccc--------------
Confidence            988789999999999999999999999999999999999999999999999999  3331110000              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (296)
T cd06655         171 --------------------------------------------------------------------------------  170 (296)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               ......|++.|+|||.+....+...+|.|++|+++|++++|..         ||.
T Consensus       171 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~---------pf~  216 (296)
T cd06655         171 -------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP---------PYL  216 (296)
T ss_pred             -------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                     0122357889999999988877788999999999999999976         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhcC
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKG  399 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~~  399 (400)
                      . .++......+.....+.+..+..++..+.+||++||..||++|||+.+++.||||+.+++...|+.+|-.+||+.|.
T Consensus       217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (296)
T cd06655         217 N-ENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSLTPLILAAKEAMKS  294 (296)
T ss_pred             C-CCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccccccCCccccchhhhhhh
Confidence            6 45555555555554555555666888999999999999999999999999999999999999999999999998774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.3e-38  Score=299.65  Aligned_cols=267  Identities=61%  Similarity=0.886  Sum_probs=224.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.||++.+......|++|.+........+.+.+|+.+++.++|+|++++++++..+...|+|+||+++++|.++
T Consensus        27 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (293)
T cd06647          27 IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  106 (293)
T ss_pred             ecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHH
Confidence            58999999999987777778899988665555667789999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+.......               
T Consensus       107 ~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg--~~~~~~~~~---------------  169 (293)
T cd06647         107 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--FCAQITPEQ---------------  169 (293)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCc--ceecccccc---------------
Confidence            988788999999999999999999999999999999999999999999999999  322111000               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (293)
T cd06647         170 --------------------------------------------------------------------------------  169 (293)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              .......|++.|+|||.+....+...+|.|++|+++|++++|..         ||.
T Consensus       170 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~---------pf~  216 (293)
T cd06647         170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP---------PYL  216 (293)
T ss_pred             ------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                    00122357788999999988777788999999999999999976         776


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhc
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  398 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~  398 (400)
                      . .+.......+.....+.+..+..++..+.++|++||..+|++||++++++.||||+.++..++|.|||.+|||+.|
T Consensus       217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~  293 (293)
T cd06647         217 N-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTPLIAAAKEATK  293 (293)
T ss_pred             C-CChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccchHHHhhhccC
Confidence            5 4444444444444444454455577889999999999999999999999999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0032|consensus

Probab=100.00  E-value=4.2e-38  Score=306.04  Aligned_cols=248  Identities=23%  Similarity=0.338  Sum_probs=212.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|+|.|+.|+.+....++..+|+|.+.....   ...+.+.+|+.+|+++. |+||+.++++|.+...+++|||+|.||.
T Consensus        43 lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGe  122 (382)
T KOG0032|consen   43 LGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGE  122 (382)
T ss_pred             hCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCch
Confidence            6999999999998888777777776654432   24468899999999998 9999999999999999999999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC----CceEEeccchhhhhhhccccchhhccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD----GSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      |++.+....+++..+..++.|++.++.|||+.|++|||+||+|+++...    +.++++|||  ++.....  .      
T Consensus       123 Lfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG--la~~~~~--~------  192 (382)
T KOG0032|consen  123 LFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG--LAKFIKP--G------  192 (382)
T ss_pred             HHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC--CceEccC--C------
Confidence            9999876569999999999999999999999999999999999999654    479999999  4442211  0      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (382)
T KOG0032|consen  193 --------------------------------------------------------------------------------  192 (382)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......+||+.|+|||++...+|+...|+||+|+++|.|++|--    
T Consensus       193 --------------------------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~----  236 (382)
T KOG0032|consen  193 --------------------------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVP----  236 (382)
T ss_pred             --------------------------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCC----
Confidence                                            01345589999999999999999999999999999999999965    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                           ||.. .+.......|.++...+ .+.+.++|..+++||++||..||.+|+|+.++|+|||++..
T Consensus       237 -----PF~~-~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  237 -----PFWG-ETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             -----CCcC-CChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence                 8888 67667777888886533 33457789999999999999999999999999999999975

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=8e-38  Score=297.47  Aligned_cols=267  Identities=61%  Similarity=0.873  Sum_probs=226.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|.++.||++.+......|++|.+........+.+.+|+.+++.+.|+|++++++.+..+...++|+||+++++|.++
T Consensus        28 lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (296)
T cd06654          28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  107 (296)
T ss_pred             ecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHH
Confidence            58999999999988777788899988766555667789999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+........              
T Consensus       108 ~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg--~~~~~~~~~~--------------  171 (296)
T cd06654         108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--FCAQITPEQS--------------  171 (296)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccc--cchhcccccc--------------
Confidence            987788999999999999999999999999999999999999999999999999  3331110000              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (296)
T cd06654         172 --------------------------------------------------------------------------------  171 (296)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               ......|++.|+|||.+.+......+|.|++|+++|+|++|..         ||.
T Consensus       172 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~---------pf~  217 (296)
T cd06654         172 -------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---------PYL  217 (296)
T ss_pred             -------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCC---------CCC
Confidence                                     0122357788999999988777789999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhc
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  398 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~  398 (400)
                      . .++......+.....+.+..+..++..+.+||.+||..||++|||+.++++||||...++...+++++-+++++-+
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (296)
T cd06654         218 N-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATK  294 (296)
T ss_pred             C-CCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCCccccHHHHHHHHHHhc
Confidence            6 4444444445444444444455678899999999999999999999999999999999999999999999998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-37  Score=300.45  Aligned_cols=246  Identities=21%  Similarity=0.294  Sum_probs=203.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+...+..||+|.+....   ......+.+|+.+++.++|+||++++++|..++..|+||||+++++|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (323)
T cd05595           3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcH
Confidence            699999999999888877888888775331   22345677899999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ...+... .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++.......           
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg--~~~~~~~~~-----------  149 (323)
T cd05595          83 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG--LCKEGISDG-----------  149 (323)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccH--HhccccCCC-----------
Confidence            9888654 68999999999999999999999999999999999999999999999999  332100000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (323)
T cd05595         150 --------------------------------------------------------------------------------  149 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       150 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~--------  193 (323)
T cd05595         150 ----------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--------  193 (323)
T ss_pred             ----------------------------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCC--------
Confidence                                        00123468999999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||.. .+.......+..... .+  +..+++.+.+||.+||+.||++|+     ++.++++||||...
T Consensus       194 -Pf~~-~~~~~~~~~~~~~~~-~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         194 -PFYN-QDHERLFELILMEEI-RF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             -CCCC-CCHHHHHHHHhcCCC-CC--CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence             8876 455555555544422 22  345788999999999999999998     99999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0594|consensus

Probab=100.00  E-value=2.2e-38  Score=293.16  Aligned_cols=193  Identities=23%  Similarity=0.378  Sum_probs=169.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCC-cccccceeEeCC------EEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPN-IVNYLDSYLVGE------ELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~n-iv~~~~~~~~~~------~~~lv~e~   71 (400)
                      +|.|+|++||++++..++..||+|++.....  +.-....+|+.+++.++|+| |+++++++.+..      .+++|+||
T Consensus        19 lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~   98 (323)
T KOG0594|consen   19 LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEF   98 (323)
T ss_pred             hCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEe
Confidence            6999999999999999999999999987754  23345689999999999999 999999999876      88999999


Q ss_pred             cCCCChHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          72 LPGGSLTDVVTET-----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +. .+|..++...     .++...++.+++||+.||.|||+++|+|||+||.||+++.+|.+||+|||  +|+.++.+..
T Consensus        99 ~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFG--lAra~~ip~~  175 (323)
T KOG0594|consen   99 LD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFG--LARAFSIPMR  175 (323)
T ss_pred             ec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccc--hHHHhcCCcc
Confidence            94 4999988752     47888999999999999999999999999999999999999999999999  7764443332


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                             ..+...+|..|+|||.+.|..                          .|....|||++||++.|++++.+.|.
T Consensus       176 -------~yt~evvTlWYRaPEvLlGs~--------------------------~Ys~~vDiWs~GcIfaEm~~~~~LFp  222 (323)
T KOG0594|consen  176 -------TYTPEVVTLWYRAPEVLLGST--------------------------SYSTSVDIWSLGCIFAEMFTRRPLFP  222 (323)
T ss_pred             -------cccccEEEeeccCHHHhcCCC--------------------------cCCCCcchHhHHHHHHHHHhCCCCCC
Confidence                   246678899999999999988                          79999999999999999999999998


Q ss_pred             cCC
Q psy9736         227 TKP  229 (400)
Q Consensus       227 ~~~  229 (400)
                      +..
T Consensus       223 G~s  225 (323)
T KOG0594|consen  223 GDS  225 (323)
T ss_pred             CCc
Confidence            744

>KOG0694|consensus

Probab=100.00  E-value=1.4e-38  Score=314.13  Aligned_cols=245  Identities=24%  Similarity=0.354  Sum_probs=206.0

Q ss_pred             CCcceEEEEEecCCCc----eeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRR----FFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~----~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++|.++..+.    +|.||.-|..... .++.+....|..|+.-. +||.+++++..|++..++|+||||+.||
T Consensus       376 LGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Gg  454 (694)
T KOG0694|consen  376 LGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGG  454 (694)
T ss_pred             eccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCC
Confidence            6999999998875444    4444444444333 34667788898888876 6999999999999999999999999999


Q ss_pred             ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          76 SLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        76 ~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++...++.+.|++..++.++..|+.||.|||++|||+||+|-+||++|..|.+||+|||  +.++...            
T Consensus       455 dm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFG--lcKe~m~------------  520 (694)
T KOG0694|consen  455 DLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFG--LCKEGMG------------  520 (694)
T ss_pred             cEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccc--cccccCC------------
Confidence            97766666789999999999999999999999999999999999999999999999999  3331100            


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       521 --------------------------------------------------------------------------------  520 (694)
T KOG0694|consen  521 --------------------------------------------------------------------------------  520 (694)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                 .....+++||||.|||||++.+..|+...|.|++|+++||||.|..       
T Consensus       521 ---------------------------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~-------  566 (694)
T KOG0694|consen  521 ---------------------------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGES-------  566 (694)
T ss_pred             ---------------------------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCC-------
Confidence                                       0112678899999999999999999999999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~~  380 (400)
                        ||.+ ++..+....|+.... ..  |..+|.++.++|+++|++||++|.-+     +++..||||++.
T Consensus       567 --PF~g-ddEee~FdsI~~d~~-~y--P~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  567 --PFPG-DDEEEVFDSIVNDEV-RY--PRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             --CCCC-CCHHHHHHHHhcCCC-CC--CCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence              8887 777777777777643 22  44589999999999999999999976     689999999864

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.1e-37  Score=300.99  Aligned_cols=246  Identities=20%  Similarity=0.309  Sum_probs=203.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++..++..++||||+++++|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L   82 (328)
T cd05593           3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL   82 (328)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCH
Confidence            689999999999888777788888775331   22346678999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ...+... .+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||  ++.......           
T Consensus        83 ~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG--~~~~~~~~~-----------  149 (328)
T cd05593          83 FFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFG--LCKEGITDA-----------  149 (328)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCc--CCccCCCcc-----------
Confidence            8888654 68999999999999999999999999999999999999999999999999  333100000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (328)
T cd05593         150 --------------------------------------------------------------------------------  149 (328)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+||+.|+|||++.+..++..+|.||+|+++|+|++|..        
T Consensus       150 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~--------  193 (328)
T cd05593         150 ----------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--------  193 (328)
T ss_pred             ----------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCC--------
Confidence                                        00123468999999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+..... .+  +..++..+.+||++||..||++|+     ++.++++||||...
T Consensus       194 -Pf~~-~~~~~~~~~~~~~~~-~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         194 -PFYN-QDHEKLFELILMEDI-KF--PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             -CCCC-CCHHHHHHHhccCCc-cC--CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence             8876 444555555544322 22  345788999999999999999997     89999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=9.1e-38  Score=296.59  Aligned_cols=262  Identities=39%  Similarity=0.609  Sum_probs=221.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+++.||.+.+......|++|.+........+.+.+|+.+++.++|+||+++++.+..++..++++||+++++|.++
T Consensus        30 lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (292)
T cd06658          30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDI  109 (292)
T ss_pred             ccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHH
Confidence            68999999999988888888999988665555567789999999999999999999999999999999999999999998


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........              
T Consensus       110 ~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg--~~~~~~~~~~--------------  173 (292)
T cd06658         110 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG--FCAQVSKEVP--------------  173 (292)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCc--chhhcccccc--------------
Confidence            887789999999999999999999999999999999999999999999999999  3331110000              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (292)
T cd06658         174 --------------------------------------------------------------------------------  173 (292)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               ......|++.|+|||.+.+..++..+|.||+|+++|||++|..         ||.
T Consensus       174 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~---------p~~  219 (292)
T cd06658         174 -------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---------PYF  219 (292)
T ss_pred             -------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                     0122357788999999988777788999999999999999987         876


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                      . .+.......+....++.+......+..+.+||++||..||++|||++++++||||....+++...|+++.+
T Consensus       220 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~  291 (292)
T cd06658         220 N-EPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCIVPLMRQY  291 (292)
T ss_pred             C-CCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccccchhhhhc
Confidence            6 45555555554444445554556788899999999999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0599|consensus

Probab=100.00  E-value=1.2e-38  Score=283.45  Aligned_cols=246  Identities=24%  Similarity=0.366  Sum_probs=192.9

Q ss_pred             CCcceEEEEEe----cCCCceeEEEEeccccccCcc----hHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFS----SDDRRFFSKILSNPITLAQQP----KKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~----~~~~~~~~~va~K~~~~~~~~----~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      +|+|+...|..    .++++++++++.-.....+..    ..+.-.+|+.||+++ .||||+++.++|+++..+++|+|+
T Consensus        25 lgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl  104 (411)
T KOG0599|consen   25 LGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDL  104 (411)
T ss_pred             hcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhh
Confidence            46776555544    455555554443222111111    135567899999997 799999999999999999999999


Q ss_pred             cCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          72 LPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        72 ~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      |+.|.|++++... .+++...+.+++|++.|+.|||..+|||||+||+||+++.+.+++|+|||  .+..+...      
T Consensus       105 ~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG--Fa~~l~~G------  176 (411)
T KOG0599|consen  105 MPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG--FACQLEPG------  176 (411)
T ss_pred             cccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc--eeeccCCc------
Confidence            9999999999876 79999999999999999999999999999999999999999999999999  32212111      


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (411)
T KOG0599|consen  177 --------------------------------------------------------------------------------  176 (411)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec------CCCCcccCCCCccchhhhhc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD------KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                        ...+..||||+|+|||.+.-      ..|+.-.|.|+.|++||.+|
T Consensus       177 ----------------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  177 ----------------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             ----------------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence                                              11445699999999998873      23335568888888888888


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                      .|--         ||+. --.+-.+..|+.|+-. .-+.|.++|...+|||.+||+.||.+|+|+.|+|+||||.
T Consensus       223 aGcp---------PFwH-RkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  223 AGCP---------PFWH-RKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             cCCC---------chhH-HHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            8853         8877 4555566667777433 3345788999999999999999999999999999999994

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=6.9e-38  Score=298.06  Aligned_cols=267  Identities=59%  Similarity=0.876  Sum_probs=225.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.+|++.+......|++|.+........+.+.+|+.+++.++|+||+++++.+..+...++|+||+++++|.++
T Consensus        27 lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (297)
T cd06656          27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  106 (297)
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHH
Confidence            68999999999988888888999988766655667789999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.......               
T Consensus       107 ~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg--~~~~~~~~~---------------  169 (297)
T cd06656         107 VTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--FCAQITPEQ---------------  169 (297)
T ss_pred             HHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCc--cceEccCCc---------------
Confidence            988789999999999999999999999999999999999999999999999999  332110000               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (297)
T cd06656         170 --------------------------------------------------------------------------------  169 (297)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              .......+++.|+|||.+.+..+...+|.|++|+++|++++|..         ||.
T Consensus       170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~---------pf~  216 (297)
T cd06656         170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP---------PYL  216 (297)
T ss_pred             ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC---------CCC
Confidence                                    00122357788999999988877788999999999999999976         776


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhc
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK  398 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~  398 (400)
                      . .++......+.....+.+..+..++..+.+|+.+||+.||++||+++++++||||+.+++.+.++..++.++++.+
T Consensus       217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (297)
T cd06656         217 N-ENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIK  293 (297)
T ss_pred             C-CCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccccCHHHHHHHHHHh
Confidence            6 3444444444444444444556678889999999999999999999999999999999999999999999988754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0585|consensus

Probab=100.00  E-value=5.8e-38  Score=297.51  Aligned_cols=253  Identities=21%  Similarity=0.249  Sum_probs=199.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------------chHHHHHHHHHHHHhCCCCCcccccceeEe--CCE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------------PKKELIINEILVMRENKHPNIVNYLDSYLV--GEE   64 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~   64 (400)
                      +|+|.|++|.++.+......||+|++.....              ...++..+||.+|++++|+|||+++++..+  ...
T Consensus       105 iG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~  184 (576)
T KOG0585|consen  105 IGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDK  184 (576)
T ss_pred             hcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCc
Confidence            6999999999999998888888888763321              123678999999999999999999999864  458


Q ss_pred             EEEEEeccCCCChHHHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          65 LWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        65 ~~lv~e~~~~~~L~~~i~~~~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      +|||+|||..|.+...-.... +.+.+++.+++.++.||+|||.+||+||||||.|++++.+|++||+|||+......+.
T Consensus       185 ~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~  264 (576)
T KOG0585|consen  185 LYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS  264 (576)
T ss_pred             eEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC
Confidence            999999999888876665555 8999999999999999999999999999999999999999999999999322111110


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      +....                                                          |                
T Consensus       265 ~~~~d----------------------------------------------------------~----------------  270 (576)
T KOG0585|consen  265 DEGSD----------------------------------------------------------D----------------  270 (576)
T ss_pred             ccccH----------------------------------------------------------H----------------
Confidence            00000                                                          0                


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC---CC-cccCCCCccch
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN---KN-QTTPPTGLTGS  299 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~-~~~d~~s~g~~  299 (400)
                                                                ......|||.|+|||.+.+..   +. ...|+|++|+.
T Consensus       271 ------------------------------------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT  308 (576)
T KOG0585|consen  271 ------------------------------------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT  308 (576)
T ss_pred             ------------------------------------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence                                                      011137999999999988732   11 44577777777


Q ss_pred             hhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       300 ~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      +|-|+.|..         ||.. +.-.+...+|....- .++....+...++|||.+||.+||+.|++..++..|||...
T Consensus       309 LYCllfG~~---------PF~~-~~~~~l~~KIvn~pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  309 LYCLLFGQL---------PFFD-DFELELFDKIVNDPL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             HHHhhhccC---------Cccc-chHHHHHHHHhcCcc-cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            777777766         9998 777777777776643 33333347889999999999999999999999999999986


Q ss_pred             c
Q psy9736         380 A  380 (400)
Q Consensus       380 ~  380 (400)
                      .
T Consensus       378 ~  378 (576)
T KOG0585|consen  378 D  378 (576)
T ss_pred             C
Confidence            4

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2.8e-37  Score=297.69  Aligned_cols=246  Identities=20%  Similarity=0.298  Sum_probs=201.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......||+|.+...   .....+.+.+|+.+++.++|+||+++++++..++..|+||||+++++|
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (325)
T cd05594           3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (325)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcH
Confidence            69999999999988777778888877533   122345678899999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ...+... .+++..++.++.|++.||.|||+ .+++||||||+||+++.++.++|+|||  ++.......          
T Consensus        83 ~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg--~~~~~~~~~----------  150 (325)
T cd05594          83 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKDG----------  150 (325)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCC--CCeecCCCC----------
Confidence            9888654 68999999999999999999997 799999999999999999999999999  332100000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (325)
T cd05594         151 --------------------------------------------------------------------------------  150 (325)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   .......||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~-------  194 (325)
T cd05594         151 -----------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL-------  194 (325)
T ss_pred             -----------------------------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCC-------
Confidence                                         00123368999999999988888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+.... ..+  +..+++.+.+||++||+.||++|+     ++.++++||||...
T Consensus       195 --Pf~~-~~~~~~~~~i~~~~-~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         195 --PFYN-QDHEKLFELILMEE-IRF--PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             --CCCC-CCHHHHHHHHhcCC-CCC--CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence              8876 44444444444332 222  344788999999999999999997     99999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.3e-37  Score=292.43  Aligned_cols=247  Identities=17%  Similarity=0.230  Sum_probs=194.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|+++.|+++.+......+++|.+....  ....+.+.+|+.++++++|+||+++++++..++..++||||++++.+.
T Consensus         9 lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~   88 (287)
T cd07848           9 VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLE   88 (287)
T ss_pred             ecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHH
Confidence            689999999999888888888888876432  223466889999999999999999999999999999999999887665


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+... ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........           
T Consensus        89 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg--~~~~~~~~~~-----------  155 (287)
T cd07848          89 LLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFG--FARNLSEGSN-----------  155 (287)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeecc--Cccccccccc-----------
Confidence            55443 368999999999999999999999999999999999999999999999999  4331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (287)
T cd07848         156 --------------------------------------------------------------------------------  155 (287)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                 .......||+.|+|||++.+..+...+|.||+|+++|||++|..         
T Consensus       156 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~---------  199 (287)
T cd07848         156 ---------------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQP---------  199 (287)
T ss_pred             ---------------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCC---------
Confidence                                       00123367889999999988888889999999999999999976         


Q ss_pred             CcchhhcHHHHHHHHHhCCC---------------------CCcc--------hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         318 PYLFILSCRQALYLIATNKK---------------------PEIK--------EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~---------------------~~~~--------~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      ||.. .+..+....+.....                     +...        ....+|..+.|||++||+.||++|||+
T Consensus       200 pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~  278 (287)
T cd07848         200 LFPG-ESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT  278 (287)
T ss_pred             CCCC-CCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence            7765 333333322221100                     0000        011257789999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      +++|+||||
T Consensus       279 ~~~l~hp~f  287 (287)
T cd07848         279 EQCLNHPAF  287 (287)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2e-37  Score=300.54  Aligned_cols=244  Identities=18%  Similarity=0.233  Sum_probs=201.1

Q ss_pred             CCcceEEEEEecCCCcee-EEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF-SKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~-~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+|+.||++...... ..||+|.+...   .....+.+.+|+.+++.++|+||+++++++..++..+++|||+++++
T Consensus        38 ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~  117 (340)
T PTZ00426         38 LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGE  117 (340)
T ss_pred             EeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCc
Confidence            589999999998644333 46777766422   22344668899999999999999999999999999999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++....    ..       
T Consensus       118 L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG--~a~~~~----~~-------  184 (340)
T PTZ00426        118 FFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFG--FAKVVD----TR-------  184 (340)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCC--CCeecC----CC-------
Confidence            99998754 78999999999999999999999999999999999999999999999999  333110    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (340)
T PTZ00426        185 --------------------------------------------------------------------------------  184 (340)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                     ..+..||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       185 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~-------  226 (340)
T PTZ00426        185 -------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCP-------  226 (340)
T ss_pred             -------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCC-------
Confidence                                           112368899999999988878889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccccC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  381 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~~  381 (400)
                        ||.. .++......+..+... +  +..+++.+.+||++||+.||++|+     +++++++||||.+..
T Consensus       227 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        227 --PFYA-NEPLLIYQKILEGIIY-F--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             --CCCC-CCHHHHHHHHhcCCCC-C--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence              8876 5666666666665332 2  334778899999999999999996     899999999998643

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=3.2e-37  Score=303.75  Aligned_cols=296  Identities=21%  Similarity=0.245  Sum_probs=207.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......+|+|.+....   ....+.+.+|+.++++++|+||+++++++.++...++||||+++++|
T Consensus         9 LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L   88 (381)
T cd05626           9 LGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDM   88 (381)
T ss_pred             EeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcH
Confidence            699999999999888888888888875432   22345688999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..+.......        
T Consensus        89 ~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFG--l~~~~~~~~~~~--------  158 (381)
T cd05626          89 MSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFG--LCTGFRWTHNSK--------  158 (381)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCc--CCcccccccccc--------
Confidence            998875 468999999999999999999999999999999999999999999999999  443221111111        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                             |.........                           ......++|.-...                      
T Consensus       159 -------~~~~~~~~~~---------------------------~~~~~~~~~~~~~~----------------------  182 (381)
T cd05626         159 -------YYQKGSHIRQ---------------------------DSMEPSDLWDDVSN----------------------  182 (381)
T ss_pred             -------cccccccccc---------------------------cccCcccccccccc----------------------
Confidence                   0000000000                           00000000000000                      


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                              ........+...............+.+||+.|+|||++.+..+...+|+||+||++|||++|..        
T Consensus       183 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~--------  246 (381)
T cd05626         183 --------CRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQP--------  246 (381)
T ss_pred             --------cccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCC--------
Confidence                    0000000000000000011112345689999999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhh--hhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLE--EEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~--~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .++......+... ....++....+++.+.+||.+|+.  .+|..|++++++++||||+..
T Consensus       247 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         247 -PFLA-PTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             -CCcC-CCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence             8877 4444444444432 223344444578899999999654  455569999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.3e-37  Score=303.61  Aligned_cols=250  Identities=21%  Similarity=0.260  Sum_probs=204.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||++.+......+|+|.+...   .....+.+.+|+.+++.++|+||+++++++.++...++||||+++++|
T Consensus        51 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L  130 (370)
T cd05596          51 IGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDL  130 (370)
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcH
Confidence            58999999999988888888888887532   122345578899999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+++....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+.......            
T Consensus       131 ~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG--~~~~~~~~~------------  196 (370)
T cd05596         131 VNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMDANG------------  196 (370)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEecc--ceeeccCCC------------
Confidence            999988789999999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       197 --------------------------------------------------------------------------------  196 (370)
T cd05596         197 --------------------------------------------------------------------------------  196 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC----CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN----KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                .......+||+.|+|||++....    +...+|.||+|+++|||++|..     
T Consensus       197 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~-----  245 (370)
T cd05596         197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT-----  245 (370)
T ss_pred             --------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCC-----
Confidence                                      00122347899999999987643    4578999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                          ||.. .+.......+.... ...++....+|..+.+||++||+.+|++  |+|++++++||||+..
T Consensus       246 ----Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         246 ----PFYA-DSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             ----CcCC-CCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence                8877 55556666665542 2233333457889999999999999988  9999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.9e-37  Score=291.97  Aligned_cols=248  Identities=19%  Similarity=0.232  Sum_probs=198.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.|+++.+......||+|.+....   ......+.+|+.++++++|+||+++++++..++..++++||+++++|
T Consensus         8 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L   87 (285)
T cd05631           8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDL   87 (285)
T ss_pred             EecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcH
Confidence            689999999999887777788888765332   22234578999999999999999999999999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ...+..   ..+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  ++....    ..      
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg--~~~~~~----~~------  155 (285)
T cd05631          88 KFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLG--LAVQIP----EG------  155 (285)
T ss_pred             HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCC--CcEEcC----CC------
Confidence            877753   258999999999999999999999999999999999999999999999999  332110    00      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (285)
T cd05631         156 --------------------------------------------------------------------------------  155 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..++..+|.||+|+++|||++|..      
T Consensus       156 ------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~------  199 (285)
T cd05631         156 ------------------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQS------  199 (285)
T ss_pred             ------------------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCC------
Confidence                                          00122368899999999998888889999999999999999987      


Q ss_pred             cccCcchhhcH--HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccccC
Q psy9736         315 FLIPYLFILSC--RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIAR  381 (400)
Q Consensus       315 ~~~P~~~~~~~--~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~~  381 (400)
                         ||......  .+............  .+..++..+.+||++||+.||++|++     ++++++||||+...
T Consensus       200 ---pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         200 ---PFRKRKERVKREEVDRRVKEDQEE--YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             ---CCCCCCcchhHHHHHHHhhccccc--CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence               88763221  12222222222222  23457889999999999999999997     89999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.7e-37  Score=291.47  Aligned_cols=247  Identities=18%  Similarity=0.239  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||.+.+......+++|.+.....   ...+.+..|+.+++.++|+||+++.+++..+...+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999998888888888888754322   1235677899999999999999999999999999999999999999


Q ss_pred             HHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVT-----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ...+.     ...+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......       
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg--~~~~~~~~~-------  151 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLG--LAVELKDGQ-------  151 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCc--cceecCCCC-------
Confidence            87763     2358999999999999999999999999999999999999999999999999  332110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       152 --------------------------------------------------------------------------------  151 (280)
T cd05608         152 --------------------------------------------------------------------------------  151 (280)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.||+|+++|||++|..    
T Consensus       152 --------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~----  195 (280)
T cd05608         152 --------------------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARG----  195 (280)
T ss_pred             --------------------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCC----
Confidence                                            00122368889999999998888889999999999999999987    


Q ss_pred             cccccCcchhhcH---HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILSC---RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~~---~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                           ||......   ......+...   ....+..++..+.+|+.+||+.||++||     +++++++||||+..
T Consensus       196 -----pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         196 -----PFRARGEKVENKELKQRILND---SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             -----CCCCCCcchhHHHHHHhhccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence                 88653221   2222222222   1222345788999999999999999999     88999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-37  Score=296.30  Aligned_cols=246  Identities=20%  Similarity=0.293  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+++.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++..++..|+||||+++++|
T Consensus         9 ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L   88 (333)
T cd05600           9 VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDF   88 (333)
T ss_pred             EeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCH
Confidence            689999999999887777788888775432   22345688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.....             
T Consensus        89 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg--~a~~~~~-------------  153 (333)
T cd05600          89 RTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFG--LSKGIVT-------------  153 (333)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCc--CCccccc-------------
Confidence            9999754 68999999999999999999999999999999999999999999999999  3331100             


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (333)
T cd05600         154 --------------------------------------------------------------------------------  153 (333)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       154 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~--------  196 (333)
T cd05600         154 -----------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFP--------  196 (333)
T ss_pred             -----------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCC--------
Confidence                                         0223468899999999998888889999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCC----CCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKK----PEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~----~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+.....    +... ....++..+.+||.+||..+|++||+++++++||||...
T Consensus       197 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         197 -PFSG-STPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             -CCCC-CCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence             8866 455555544443211    1111 112468899999999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.4e-37  Score=302.22  Aligned_cols=295  Identities=20%  Similarity=0.229  Sum_probs=209.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......+|+|.+....   ....+.+.+|+.++++++|+||+++++.|.+++.+++||||+++++|
T Consensus         9 LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L   88 (382)
T cd05625           9 LGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDM   88 (382)
T ss_pred             EEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcH
Confidence            699999999999988888888888875432   22345688999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.+ +.+++..++.++.|++.||.|||+.+|+||||||+||+++.+|.++|+|||  ++..+.......        
T Consensus        89 ~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFG--la~~~~~~~~~~--------  158 (382)
T cd05625          89 MSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG--LCTGFRWTHDSK--------  158 (382)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECC--CCcccccccccc--------
Confidence            998865 468999999999999999999999999999999999999999999999999  443221111100        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                             |..    .+..                            ...               ....+....... .  
T Consensus       159 -------~~~----~~~~----------------------------~~~---------------~~~~~~~~~~~~-~--  181 (382)
T cd05625         159 -------YYQ----SGDH----------------------------VRQ---------------DSMDFSNEWGDP-A--  181 (382)
T ss_pred             -------ccc----cccc----------------------------ccc---------------cccccccccccc-c--
Confidence                   000    0000                            000               000000000000 0  


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                           .......+..  ...............+.+||+.|+|||++.+..+...+|.||+||++|||++|..        
T Consensus       182 -----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~--------  246 (382)
T cd05625         182 -----NCRCGDRLKP--LERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP--------  246 (382)
T ss_pred             -----cccccccccc--hhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCC--------
Confidence                 0000000000  0000000111122345689999999999999888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                       ||.. .++.+....+.... ...++....+++.+.+||.+|+. ||++|++   ++++++||||+..
T Consensus       247 -Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         247 -PFLA-QTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             -CCCC-CCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHcc-CHhHcCCCCCHHHHhcCCCcCCc
Confidence             8876 56666666665432 23333345678999999999875 9999998   9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0580|consensus

Probab=100.00  E-value=3.2e-38  Score=276.16  Aligned_cols=243  Identities=23%  Similarity=0.357  Sum_probs=207.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|-|+.||.++-.+..--||+|++...+   ....+++.+|++|...|+||||+++|++|.++..+|+++||..+|.+
T Consensus        30 LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel  109 (281)
T KOG0580|consen   30 LGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGEL  109 (281)
T ss_pred             ccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchH
Confidence            689999999999888887777777765332   23457899999999999999999999999999999999999999999


Q ss_pred             HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +..+..+   .+++.....++.|++.|+.|||.++|+||||||+|++++..+.++++|||..+..               
T Consensus       110 ~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~---------------  174 (281)
T KOG0580|consen  110 YKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---------------  174 (281)
T ss_pred             HHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec---------------
Confidence            9988843   6999999999999999999999999999999999999999999999999921111               


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (281)
T KOG0580|consen  175 --------------------------------------------------------------------------------  174 (281)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                  ....+.++|||..|.|||+..+..+....|.|++|+..||++.|--      
T Consensus       175 ----------------------------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~p------  220 (281)
T KOG0580|consen  175 ----------------------------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLP------  220 (281)
T ss_pred             ----------------------------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCC------
Confidence                                        0123778899999999999999988899999999999999999974      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||.. .+..+...+|.+-. -.+  |..++..+.|||.+||.++|.+|++..|++.|||+..
T Consensus       221 ---pFes-~~~~etYkrI~k~~-~~~--p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  221 ---PFES-QSHSETYKRIRKVD-LKF--PSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             ---chhh-hhhHHHHHHHHHcc-ccC--CcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence               6666 56555565555542 222  4668999999999999999999999999999999974

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=5.4e-37  Score=291.97  Aligned_cols=264  Identities=38%  Similarity=0.596  Sum_probs=223.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.|+.+.+......|++|.+........+.+.+|+.+++.+.|+||+++++.+..++..++++||+++++|..+
T Consensus        29 ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~  108 (297)
T cd06659          29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI  108 (297)
T ss_pred             cCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHH
Confidence            68999999999988877888999988665555567789999999999999999999999999999999999999999998


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........              
T Consensus       109 ~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg--~~~~~~~~~~--------------  172 (297)
T cd06659         109 VSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFG--FCAQISKDVP--------------  172 (297)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeech--hHhhcccccc--------------
Confidence            887789999999999999999999999999999999999999999999999999  3331111100              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (297)
T cd06659         173 --------------------------------------------------------------------------------  172 (297)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               ......|++.|+|||++.+..+...+|.|++|+++|||++|..         ||.
T Consensus       173 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~---------p~~  218 (297)
T cd06659         173 -------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP---------PYF  218 (297)
T ss_pred             -------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                     0122357789999999988777788999999999999999986         877


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHH
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKE  395 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~  395 (400)
                      . .++......+.....+.......++..+.++|++||+.+|++||+++++++||||.....+..+.+|++...+
T Consensus       219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~~  292 (297)
T cd06659         219 S-DSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVPLIQQYRK  292 (297)
T ss_pred             C-CCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcccccchHHHHhh
Confidence            6 4555555555544444444445578889999999999999999999999999999999999999999988765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=7.7e-37  Score=300.47  Aligned_cols=291  Identities=21%  Similarity=0.257  Sum_probs=207.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......+|+|.+....   ....+.+.+|+.+++.++|+||+++++.|..++.+|+||||+++++|
T Consensus         9 lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L   88 (376)
T cd05598           9 IGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDM   88 (376)
T ss_pred             EEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcH
Confidence            699999999999988888888888875321   12345678999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||  ++..+.......        
T Consensus        89 ~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG--~a~~~~~~~~~~--------  158 (376)
T cd05598          89 MSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG--LCTGFRWTHDSK--------  158 (376)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCC--CCcccccccccc--------
Confidence            9998754 68899999999999999999999999999999999999999999999999  443221111100        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                             |..+..    .                             ...+          .+........         
T Consensus       159 -------~~~~~~----~-----------------------------~~~~----------~~~~~~~~~~---------  179 (376)
T cd05598         159 -------YYQKGD----H-----------------------------HRQD----------SMEPSEEWSE---------  179 (376)
T ss_pred             -------cccccc----c-----------------------------cccc----------cccccccccc---------
Confidence                   000000    0                             0000          0000000000         


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                             .......  ..................+||+.|+|||++.+..+...+|+||+||++|||++|..        
T Consensus       180 -------~~~~~~~--~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~--------  242 (376)
T cd05598         180 -------IDRCRLK--PLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP--------  242 (376)
T ss_pred             -------ccccccc--chhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCC--------
Confidence                   0000000  00000000001112335689999999999999888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhh---cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---s~~~~l~hp~~~~~  380 (400)
                       ||.. .++.+....+.... ...++...+++..+.+||.+|+ .+|++|+   |+.++++||||+..
T Consensus       243 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         243 -PFLA-DTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             -CCCC-CCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence             8877 45555544444322 2223333457889999999987 4999999   99999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5e-37  Score=295.37  Aligned_cols=246  Identities=21%  Similarity=0.273  Sum_probs=202.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+...   .....+.+..|+.+++.+ +|+||+++++++...+.+|+||||+++++
T Consensus         3 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~   82 (320)
T cd05590           3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGD   82 (320)
T ss_pred             eeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCch
Confidence            69999999999988877778888876532   222345677888888876 79999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++...    ...       
T Consensus        83 L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG--~~~~~----~~~-------  149 (320)
T cd05590          83 LMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG--MCKEG----IFN-------  149 (320)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCC--CCeec----CcC-------
Confidence            9988865 479999999999999999999999999999999999999999999999999  32210    000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (320)
T cd05590         150 --------------------------------------------------------------------------------  149 (320)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ........||+.|+|||++.+..+...+|.||+|+++|+|++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~-------  194 (320)
T cd05590         150 ----------------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHA-------  194 (320)
T ss_pred             ----------------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCC-------
Confidence                                        000123468999999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH------HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA------SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~------~~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+..+.. .+  +..++..+.+||++||+.||++|+++      +++++||||+..
T Consensus       195 --Pf~~-~~~~~~~~~i~~~~~-~~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         195 --PFEA-ENEDDLFEAILNDEV-VY--PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             --CCCC-CCHHHHHHHHhcCCC-CC--CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence              8876 556666666665532 22  33478899999999999999999998      899999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0658|consensus

Probab=100.00  E-value=2.8e-38  Score=292.29  Aligned_cols=187  Identities=25%  Similarity=0.351  Sum_probs=161.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~   75 (400)
                      +|+|+|+.|+.+.-.+....||||++-.+.+..    .+|+++|+.++|+|||++.-+|....     ...+||||++. 
T Consensus        32 iG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-  106 (364)
T KOG0658|consen   32 IGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-  106 (364)
T ss_pred             EeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-
Confidence            589999999999999999999999986544322    47999999999999999987776432     34689999954 


Q ss_pred             ChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhh
Q psy9736          76 SLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        76 ~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      +|...++.     ..++.-.++.+.+||+.|+.|||+.||+||||||.|+++|.+ |.+||+|||  .|+.+.....   
T Consensus       107 tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFG--SAK~L~~~ep---  181 (364)
T KOG0658|consen  107 TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFG--SAKVLVKGEP---  181 (364)
T ss_pred             HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCC--cceeeccCCC---
Confidence            99999883     468888999999999999999999999999999999999987 999999999  6665543332   


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                           .....+|.-|+|||+++|..                          .|....|+||+||+++|++.|.+.|.+.
T Consensus       182 -----niSYicSRyYRaPELifga~--------------------------~Yt~~IDiWSaGCV~aELl~g~plFpG~  229 (364)
T KOG0658|consen  182 -----NISYICSRYYRAPELIFGAT--------------------------EYTTSIDIWSAGCVMAELLKGQPLFPGD  229 (364)
T ss_pred             -----ceeEEEeccccCHHHHcCcc--------------------------ccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence                 24567899999999999988                          8999999999999999999999999873

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-36  Score=292.71  Aligned_cols=246  Identities=22%  Similarity=0.330  Sum_probs=200.1

Q ss_pred             CCcceEEEEEecCC---CceeEEEEecccccc----CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLA----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||.+.+   ......||+|.+...    .......+.+|+.+++.++|+||++++++|..++..|++|||++
T Consensus         4 lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   83 (323)
T cd05584           4 LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLS   83 (323)
T ss_pred             eeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCC
Confidence            68999999998753   344566777766432    22234567889999999999999999999999999999999999


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+.+... .+.+..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.....    .    
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~----~----  153 (323)
T cd05584          84 GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFG--LCKESIH----E----  153 (323)
T ss_pred             CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCc--CCeeccc----C----
Confidence            99999988754 68889999999999999999999999999999999999999999999999  3321000    0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (323)
T cd05584         154 --------------------------------------------------------------------------------  153 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     ........||+.|+|||++.+..+...+|.||+|+++|||++|..    
T Consensus       154 -------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~----  198 (323)
T cd05584         154 -------------------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP----  198 (323)
T ss_pred             -------------------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCC----
Confidence                                           000123468999999999998888889999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                           ||.. .+.......+..+.. .+  +..+++.+.+||++||+.||++||     +++++++||||+..
T Consensus       199 -----pf~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         199 -----PFTA-ENRKKTIDKILKGKL-NL--PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             -----CCCC-CCHHHHHHHHHcCCC-CC--CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence                 8876 566666666666532 22  334788999999999999999999     89999999999753

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0667|consensus

Probab=100.00  E-value=4.2e-37  Score=303.22  Aligned_cols=243  Identities=23%  Similarity=0.262  Sum_probs=195.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CC-----CcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HP-----NIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.|.++.+..+...||||.++-... ...+...|+.+|..|+ |.     |+|+++++|...++.|+|+|++ +
T Consensus       194 LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL-~  271 (586)
T KOG0667|consen  194 LGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL-S  271 (586)
T ss_pred             ecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh-h
Confidence            7999999999999999999999999975433 3455678999999985 43     9999999999999999999999 6


Q ss_pred             CChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC--CceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD--GSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+|+++++.+   +++...++.++.||+.||.+||+.+||||||||||||+...  ..+||+|||  .+.    ..... 
T Consensus       272 ~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFG--SSc----~~~q~-  344 (586)
T KOG0667|consen  272 TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFG--SSC----FESQR-  344 (586)
T ss_pred             hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecc--ccc----ccCCc-
Confidence            6999999865   68999999999999999999999999999999999999765  468999999  222    11111 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       345 --------------------------------------------------------------------------------  344 (586)
T KOG0667|consen  345 --------------------------------------------------------------------------------  344 (586)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                           .-+.+.+..|+|||+|++.+|....|+||+|||+.||++|-  
T Consensus       345 -------------------------------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~--  385 (586)
T KOG0667|consen  345 -------------------------------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE--  385 (586)
T ss_pred             -------------------------------------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc--
Confidence                                                 11335677999999999999999999999999999999993  


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhC--CC--------------------------------------------------
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATN--KK--------------------------------------------------  337 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~--~~--------------------------------------------------  337 (400)
                              |.+.+++..+++..|+.-  .+                                                  
T Consensus       386 --------PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~  457 (586)
T KOG0667|consen  386 --------PLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER  457 (586)
T ss_pred             --------cccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence                    555555555555555211  00                                                  


Q ss_pred             --C-Ccchhh-----hhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         338 --P-EIKEKE-----KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       338 --~-~~~~~~-----~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                        | ..+...     .-...+.|||.+||+.||++|+|+.++|+||||..
T Consensus       458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence              0 000000     01126789999999999999999999999999994

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=5.3e-37  Score=300.96  Aligned_cols=250  Identities=21%  Similarity=0.270  Sum_probs=202.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......+|+|.+...   .....+.+.+|+.+++.++|+||+++++++.++..+|+||||+++++|
T Consensus        51 lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L  130 (370)
T cd05621          51 IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL  130 (370)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcH
Confidence            58999999999988877777888876421   122345678999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+++....+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+.......            
T Consensus       131 ~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG--~a~~~~~~~------------  196 (370)
T cd05621         131 VNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG--TCMKMDETG------------  196 (370)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecc--cceecccCC------------
Confidence            999988789999999999999999999999999999999999999999999999999  333110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       197 --------------------------------------------------------------------------------  196 (370)
T cd05621         197 --------------------------------------------------------------------------------  196 (370)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC----CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN----KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                .....+.+||+.|+|||++....    +...+|.||+|+++|||++|..     
T Consensus       197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~-----  245 (370)
T cd05621         197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT-----  245 (370)
T ss_pred             --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCC-----
Confidence                                      00012347899999999987643    4578999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                          ||.. .+.......+.... ...++....++..+.+|+.+||..++.+  |+|++++++||||+..
T Consensus       246 ----Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         246 ----PFYA-DSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ----CCCC-CCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence                8876 55566666666542 2333334457889999999999865544  8999999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-37  Score=300.72  Aligned_cols=286  Identities=21%  Similarity=0.249  Sum_probs=208.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++..+...|+||||+++++|
T Consensus         9 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L   88 (364)
T cd05599           9 IGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDM   88 (364)
T ss_pred             EEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHH
Confidence            689999999999988888888888875432   22345678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++..+........       
T Consensus        89 ~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~~~~~~~-------  159 (364)
T cd05599          89 MTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFG--LCTGLKKSHRTEF-------  159 (364)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecc--cceeccccccccc-------
Confidence            998875 468999999999999999999999999999999999999999999999999  4432211111000       


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                             |..   .....                             ...               ...+...+...    
T Consensus       160 -------~~~---~~~~~-----------------------------~~~---------------~~~~~~~~~~~----  181 (364)
T cd05599         160 -------YRI---LSHAL-----------------------------PSN---------------FLDFISKPMSS----  181 (364)
T ss_pred             -------ccc---ccccc-----------------------------ccc---------------ccccccccccc----
Confidence                   000   00000                             000               00000000000    


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                    .......  ...........+||+.|+|||++....++..+|.||+||++|||++|..        
T Consensus       182 --------------~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~--------  237 (364)
T cd05599         182 --------------KRKAETW--KRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP--------  237 (364)
T ss_pred             --------------cccccch--hhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC--------
Confidence                          0000000  0000011234579999999999998888889999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                       ||.. .++.+....+..... ..++....+++.+.+||++||. +|.+|++   ++++++||||+..
T Consensus       238 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         238 -PFCS-DNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence             8876 566666666655322 2223333578899999999997 9999998   9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=4.3e-37  Score=293.25  Aligned_cols=251  Identities=20%  Similarity=0.242  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.||.+.+......||+|.+..... .....+.+|+.+++.++|+||+++++++..+...++||||+. ++|.+
T Consensus        13 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~   91 (303)
T cd07869          13 LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQ   91 (303)
T ss_pred             EEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHH
Confidence            5899999999999888888889988764432 223457889999999999999999999999999999999995 57877


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++..  +.+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......            
T Consensus        92 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg--~~~~~~~~~------------  157 (303)
T cd07869          92 YMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFG--LARAKSVPS------------  157 (303)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCC--cceeccCCC------------
Confidence            7764  368999999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (303)
T cd07869         158 --------------------------------------------------------------------------------  157 (303)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......||+.|+|||++.+. .+...+|.||+|+++|+|++|..        
T Consensus       158 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~--------  202 (303)
T cd07869         158 ---------------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVA--------  202 (303)
T ss_pred             ---------------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       001223578899999998764 45577899999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhC--CC------------------------CCcc---hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         317 IPYLFILSCRQALYLIATN--KK------------------------PEIK---EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~--~~------------------------~~~~---~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                       ||....+....+..+...  .+                        ..+.   ....++..+.|||++||+.||++|||
T Consensus       203 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s  281 (303)
T cd07869         203 -AFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS  281 (303)
T ss_pred             -CCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC
Confidence             887644443333333211  00                        0000   00123467899999999999999999


Q ss_pred             HHHHhcCccccccCC
Q psy9736         368 ASLLLKHPFLKIARP  382 (400)
Q Consensus       368 ~~~~l~hp~~~~~~~  382 (400)
                      +.++|+||||++.++
T Consensus       282 ~~~~l~h~~f~~~~~  296 (303)
T cd07869         282 AQAALSHEYFSDLPP  296 (303)
T ss_pred             HHHHhcCcccccCCh
Confidence            999999999997654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.8e-37  Score=302.15  Aligned_cols=246  Identities=17%  Similarity=0.194  Sum_probs=192.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+..+...||+|...      .+.+.+|+.++++++|+||++++++|..+...++++|++. ++|..+
T Consensus       100 lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~  172 (391)
T PHA03212        100 FTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCY  172 (391)
T ss_pred             EcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHH
Confidence            589999999999999999999999753      2346789999999999999999999999999999999994 688887


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      +.. ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++........             
T Consensus       173 l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG--~a~~~~~~~~-------------  237 (391)
T PHA03212        173 LAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFG--AACFPVDINA-------------  237 (391)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCC--cccccccccc-------------
Confidence            764 468999999999999999999999999999999999999999999999999  4331100000             


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       238 --------------------------------------------------------------------------------  237 (391)
T PHA03212        238 --------------------------------------------------------------------------------  237 (391)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                               .......||+.|+|||++.+..++..+|.||+|+++|||++|..         ||
T Consensus       238 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~---------p~  283 (391)
T PHA03212        238 -------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHD---------SL  283 (391)
T ss_pred             -------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCC---------Cc
Confidence                                     00123478999999999999888899999999999999999964         33


Q ss_pred             chhh-------------------------------cHHH-HHHHHHhCC---C---CCcchhhhhcHHHHHHHHHhhhhh
Q psy9736         320 LFIL-------------------------------SCRQ-ALYLIATNK---K---PEIKEKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       320 ~~~~-------------------------------~~~~-~~~~i~~~~---~---~~~~~~~~~s~~~~dli~~~L~~d  361 (400)
                      ....                               .... .........   +   +.......++..+.+||++||+.|
T Consensus       284 ~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d  363 (391)
T PHA03212        284 FEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD  363 (391)
T ss_pred             CCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC
Confidence            2210                               0001 110111110   0   011111234668999999999999


Q ss_pred             hhhhhcHHHHhcCccccccCC
Q psy9736         362 VETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~~  382 (400)
                      |++|||++|+|+||||+....
T Consensus       364 P~~Rpta~elL~hp~f~~~~~  384 (391)
T PHA03212        364 AHHRPSAEALLDFAAFQDIPD  384 (391)
T ss_pred             hhhCCCHHHHhcChhhccCCC
Confidence            999999999999999987543

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-36  Score=298.31  Aligned_cols=295  Identities=20%  Similarity=0.242  Sum_probs=205.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||++++++|.++..+|+||||+++++|
T Consensus         9 lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L   88 (377)
T cd05629           9 IGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDL   88 (377)
T ss_pred             EeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcH
Confidence            689999999999888888888888775321   22345678999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..+.......        
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfG--la~~~~~~~~~~--------  158 (377)
T cd05629          89 MTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFG--LSTGFHKQHDSA--------  158 (377)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecc--cccccccccccc--------
Confidence            998865 468999999999999999999999999999999999999999999999999  443221111000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                            .|..+..  +                                                 ........ ......
T Consensus       159 ------~~~~~~~--~-------------------------------------------------~~~~~~~~-~~~~~~  180 (377)
T cd05629         159 ------YYQKLLQ--G-------------------------------------------------KSNKNRID-NRNSVA  180 (377)
T ss_pred             ------ccccccc--c-------------------------------------------------cccccccc-cccccc
Confidence                  0000000  0                                                 00000000 000000


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                      .+..... ....-+..+.+.     .........+||+.|+|||++.+..++..+|.||+||++|||++|..        
T Consensus       181 ~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~--------  246 (377)
T cd05629         181 VDSINLT-MSSKDQIATWKK-----NRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWP--------  246 (377)
T ss_pred             ccccccc-ccchhhhhhhhh-----cccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCC--------
Confidence            0000000 000000000000     00001124679999999999999888889999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhh---hcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETR---ASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R---~s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+.+..+... ....++....++..+.+||.+||. +|.+|   +|+.++++||||+..
T Consensus       247 -Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         247 -PFCS-ENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             -CCCC-CCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence             8876 4555555555543 122333334578899999999998 77765   599999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.2e-36  Score=292.77  Aligned_cols=245  Identities=21%  Similarity=0.262  Sum_probs=202.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+...   .....+.+..|+.+++.+ +|+||+++++++..++..|+||||+++++
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   82 (321)
T cd05591           3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGD   82 (321)
T ss_pred             cccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCc
Confidence            69999999999988777777888876532   223345677899998876 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.....    .       
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg--~~~~~~~----~-------  149 (321)
T cd05591          83 LMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFG--MCKEGIL----N-------  149 (321)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecc--cceeccc----C-------
Confidence            9988864 468999999999999999999999999999999999999999999999999  3321000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (321)
T cd05591         150 --------------------------------------------------------------------------------  149 (321)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ........||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~-------  194 (321)
T cd05591         150 ----------------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQP-------  194 (321)
T ss_pred             ----------------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCC-------
Confidence                                        000123468999999999998888889999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-------cHHHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-------SASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-------s~~~~l~hp~~~~  379 (400)
                        ||.. .+.......+..+... .  +..++..+.+||.+||+.||++|+       ++.++++||||..
T Consensus       195 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         195 --PFEA-DNEDDLFESILHDDVL-Y--PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             --CCCC-CCHHHHHHHHHcCCCC-C--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence              8876 5666666666665322 2  234678999999999999999999       9999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.2e-36  Score=293.88  Aligned_cols=247  Identities=20%  Similarity=0.303  Sum_probs=200.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+.+|+.+++.+ +|+||+++++++..+...|++|||+++++
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~   82 (329)
T cd05588           3 IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGD   82 (329)
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCC
Confidence            689999999999887777788888776431   22345578899999998 79999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |..++.. +.+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++....    ..       
T Consensus        83 L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg--~~~~~~----~~-------  149 (329)
T cd05588          83 LMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYG--MCKEGI----RP-------  149 (329)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCc--cccccc----cC-------
Confidence            9988864 479999999999999999999999999999999999999999999999999  332000    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (329)
T cd05588         150 --------------------------------------------------------------------------------  149 (329)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..+...+|.||+|+++|+|++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~-------  194 (329)
T cd05588         150 ----------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS-------  194 (329)
T ss_pred             ----------------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCC-------
Confidence                                        001223478999999999998888889999999999999999987       


Q ss_pred             ccCcch-------hhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc------HHHHhcCccccc
Q psy9736         316 LIPYLF-------ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s------~~~~l~hp~~~~  379 (400)
                        ||..       .....+...+.+......+  +..++..+.+||.+||+.||++|+|      ++++++||||..
T Consensus       195 --Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         195 --PFDIVGMSDNPDQNTEDYLFQVILEKQIRI--PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             --CcccccccccccccchHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence              7742       1122333444444433333  3347889999999999999999997      789999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG4717|consensus

Probab=100.00  E-value=4.7e-37  Score=293.23  Aligned_cols=257  Identities=21%  Similarity=0.303  Sum_probs=216.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|.|..|.+++.-.++++||+|++....-+  ....+.+|+..|+-++|+|||++|++..++..+|+++|+=.+|+|+
T Consensus        26 lG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~  105 (864)
T KOG4717|consen   26 LGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLF  105 (864)
T ss_pred             hcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHH
Confidence            69999999999999999999999998654322  2456789999999999999999999999999999999999999999


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++|-.+  .+.+..++.++.||+.|+.|||+-.+||||+||+|+++.. .|-+||+||| |... +              
T Consensus       106 DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFG-FSNk-f--------------  169 (864)
T KOG4717|consen  106 DYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFG-FSNK-F--------------  169 (864)
T ss_pred             HHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeecc-cccc-C--------------
Confidence            999753  7999999999999999999999999999999999998765 5999999999 2211 1              


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                     ..+                              
T Consensus       170 -----------------------------------------------~PG------------------------------  172 (864)
T KOG4717|consen  170 -----------------------------------------------QPG------------------------------  172 (864)
T ss_pred             -----------------------------------------------CCc------------------------------
Confidence                                                           111                              


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                   ...++.||+..|-|||++.+..|. +..|+||+|+|+|.+.+|.-      
T Consensus       173 -----------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~------  217 (864)
T KOG4717|consen  173 -----------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQP------  217 (864)
T ss_pred             -----------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCC------
Confidence                                         125778999999999999999888 78899999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc-cCCCCCcchhhhh
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI-ARPLASLTPLIMA  392 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~-~~~~~~l~~~~~~  392 (400)
                         ||.. .+.-+.+..|+.- +..+  |.-+|.+++|||.+||..||.+|.|.+++.+|+|++. .++.+--+||+..
T Consensus       218 ---PFqe-ANDSETLTmImDC-KYtv--PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPLvsr  289 (864)
T KOG4717|consen  218 ---PFQE-ANDSETLTMIMDC-KYTV--PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPLVSR  289 (864)
T ss_pred             ---cccc-ccchhhhhhhhcc-cccC--chhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccccCceeeh
Confidence               9988 4555555544433 2344  4458899999999999999999999999999999996 5555555777754

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.2e-36  Score=293.20  Aligned_cols=246  Identities=22%  Similarity=0.294  Sum_probs=202.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHH---hCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMR---ENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~---~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||.+.+......||+|.+....   ....+.+.+|+.++.   .++|+||+++++++..++..|+||||+++
T Consensus         7 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~   86 (324)
T cd05589           7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAG   86 (324)
T ss_pred             EeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCC
Confidence            689999999999887777788888875331   223456777776654   56899999999999999999999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++|...+..+.+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  ++.....    .      
T Consensus        87 ~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg--~~~~~~~----~------  154 (324)
T cd05589          87 GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFG--LCKEGMG----F------  154 (324)
T ss_pred             CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCccc--CCccCCC----C------
Confidence            999998887789999999999999999999999999999999999999999999999999  3321000    0      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (324)
T cd05589         155 --------------------------------------------------------------------------------  154 (324)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                   .......+||+.|+|||++.+..+...+|.||+|+++|||++|..      
T Consensus       155 -----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~------  199 (324)
T cd05589         155 -----------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGES------  199 (324)
T ss_pred             -----------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCC------
Confidence                                         000223478999999999998888888999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                         ||.. .+..+....+..+... .  +..++..+.+||.+||+.||++||     ++.++++||||+..
T Consensus       200 ---pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         200 ---PFPG-DDEEEVFDSIVNDEVR-Y--PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             ---CCCC-CCHHHHHHHHHhCCCC-C--CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence               8876 5556666666665432 2  334788999999999999999999     79999999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-37  Score=296.60  Aligned_cols=277  Identities=21%  Similarity=0.257  Sum_probs=209.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++..+...++||||+++++|
T Consensus         9 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   88 (350)
T cd05573           9 IGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDL   88 (350)
T ss_pred             EEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCH
Confidence            689999999999988888888888876432   23456688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||  .+............      
T Consensus        89 ~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg--~~~~~~~~~~~~~~------  160 (350)
T cd05573          89 MNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFG--LCKKMNKAKDREYY------  160 (350)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCC--CCccCcccCccccc------
Confidence            9998764 79999999999999999999999999999999999999999999999999  44322221111000      


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                    .....              ...+           
T Consensus       161 ----------------------------------------------~~~~~--------------~~~~-----------  169 (350)
T cd05573         161 ----------------------------------------------LNDSH--------------NLLF-----------  169 (350)
T ss_pred             ----------------------------------------------ccccc--------------cccc-----------
Confidence                                                          00000              0000           


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                   ......................||+.|+|||++.+..+...+|+||+|+++|||++|..        
T Consensus       170 -------------~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~--------  228 (350)
T cd05573         170 -------------RDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP--------  228 (350)
T ss_pred             -------------cccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCC--------
Confidence                         00000000000111112345579999999999999888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-HHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-~~~~l~hp~~~~~  380 (400)
                       ||.. .+.......+... ....++....+++.+.+||.+||. ||.+|++ ++++++||||+..
T Consensus       229 -Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         229 -PFYS-DTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             -CCCC-CCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence             8877 4555555555552 112222233368899999999998 9999999 9999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-36  Score=286.71  Aligned_cols=260  Identities=31%  Similarity=0.494  Sum_probs=217.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.||.+.+......+++|..........+.+.+|+.++++++|+||+++++++..+...+++|||+++++|..+
T Consensus        13 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (280)
T cd06611          13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSI   92 (280)
T ss_pred             hcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHH
Confidence            58899999999988777888999988766555567789999999999999999999999999999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........            
T Consensus        93 ~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g--~~~~~~~~~~------------  158 (280)
T cd06611          93 MLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFG--VSAKNKSTLQ------------  158 (280)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCc--cchhhccccc------------
Confidence            875  368999999999999999999999999999999999999999999999999  3321110000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (280)
T cd06611         159 --------------------------------------------------------------------------------  158 (280)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                 ......|++.|+|||++..     .++...+|.|++|+++|+|++|..     
T Consensus       159 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~-----  206 (280)
T cd06611         159 ---------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP-----  206 (280)
T ss_pred             ---------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCC-----
Confidence                                       0122357778889998753     334457899999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIM  391 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~  391 (400)
                          ||.. .+..+....+..+..+.+..+..++..+.+||.+||+.||++||+++++++||||.+......+.+||.
T Consensus       207 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~~~~~~  279 (280)
T cd06611         207 ----PHHE-LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAIKDLLA  279 (280)
T ss_pred             ----Cccc-CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhHHHHHHhh
Confidence                7766 566666777777766666556678899999999999999999999999999999999877777887774

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0589|consensus

Probab=100.00  E-value=4.8e-37  Score=295.66  Aligned_cols=246  Identities=26%  Similarity=0.345  Sum_probs=215.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCE-EEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEE-LWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~~~~~~L   77 (400)
                      +|+|+|+.+++.+.+....++++|.+......  .++...+|+.++++++|||||.+.+.|..++. .+++|+||+||++
T Consensus        12 iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l   91 (426)
T KOG0589|consen   12 VGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDL   91 (426)
T ss_pred             cCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCH
Confidence            69999999999999999999999999987643  34567899999999999999999999998887 9999999999999


Q ss_pred             HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.+...   .++++.+..++.|++.|+.|||+.+|+|||+|+.||++.+++.++|+|||  +++.+..+.+        
T Consensus        92 ~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfG--laK~l~~~~~--------  161 (426)
T KOG0589|consen   92 AQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFG--LAKILNPEDS--------  161 (426)
T ss_pred             HHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchh--hhhhcCCchh--------
Confidence            9999753   69999999999999999999999999999999999999999999999999  7764433321        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (426)
T KOG0589|consen  162 --------------------------------------------------------------------------------  161 (426)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ...+..|||.||.||++.+.+|+.++|+|++||++|||++-.-      
T Consensus       162 -------------------------------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~------  204 (426)
T KOG0589|consen  162 -------------------------------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKP------  204 (426)
T ss_pred             -------------------------------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccc------
Confidence                                           1345689999999999999999999999999999999999863      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         +|.. .+-.....+|.+..-..+  +..++.+++.+|..||..+|..||++.++|.+|.+..
T Consensus       205 ---aF~a-~~m~~Li~ki~~~~~~Pl--p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  205 ---AFKA-SNMSELILKINRGLYSPL--PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             ---ccCc-cchHHHHHHHhhccCCCC--CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence               5555 666666777777764444  4448999999999999999999999999999998874

>KOG0192|consensus

Probab=100.00  E-value=1.3e-36  Score=293.22  Aligned_cols=238  Identities=21%  Similarity=0.339  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHHHHHHHHHHHhCCCCCcccccceeEeCC-EEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVGE-ELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L   77 (400)
                      +|.|+|++|+.+....... ||+|.+.......  .+.|.+|+.+|.+++|||||+|++++.... ..++||||+++|+|
T Consensus        49 iG~G~~g~V~~~~~~g~~~-vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL  127 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWRGTDV-VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSL  127 (362)
T ss_pred             cccCCceeEEEEEeCCcee-EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcH
Confidence            6899999999776654432 8888877554332  458999999999999999999999999877 79999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++..   ..++...+..++.+|+.|++|||+.+ |||||+||+||+++.++ .+||+|||  +++......       
T Consensus       128 ~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFG--lsr~~~~~~-------  198 (362)
T KOG0192|consen  128 SVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFG--LSREKVISK-------  198 (362)
T ss_pred             HHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCc--cceeecccc-------
Confidence            999965   47999999999999999999999999 99999999999999998 99999999  443110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       199 --------------------------------------------------------------------------------  198 (362)
T KOG0192|consen  199 --------------------------------------------------------------------------------  198 (362)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee--cCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL--DKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                      ...+...||+.|||||++.  ..++..+.|+||+|++++||++|.+  
T Consensus       199 --------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~--  244 (362)
T KOG0192|consen  199 --------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI--  244 (362)
T ss_pred             --------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC--
Confidence                                            0011247999999999999  5688899999999999999999999  


Q ss_pred             cccccccCcchhhcHHHHHHHHH-hCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~-~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                             ||.. ..+......+. ++.++.++.  ..++.+..||.+||..||++||+..+++
T Consensus       245 -------Pf~~-~~~~~~~~~v~~~~~Rp~~p~--~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  245 -------PFED-LAPVQVASAVVVGGLRPPIPK--ECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             -------CCCC-CCHHHHHHHHHhcCCCCCCCc--cCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence                   9999 55567666665 555566544  3788999999999999999999999875

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.3e-36  Score=285.47  Aligned_cols=264  Identities=29%  Similarity=0.478  Sum_probs=217.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|.++.||++.+......+++|..........+.+.+|+.+++.++|+||+++++.+..++..+++|||+++++|..+
T Consensus        20 lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   99 (292)
T cd06644          20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAI   99 (292)
T ss_pred             ecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHH
Confidence            68999999999998888888999988766555567788999999999999999999999999999999999999999887


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +.+  ..+++..+..++.|++.++.|||+.+++|+||+|+||+++.++.++|+|||  .+.......             
T Consensus       100 ~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg--~~~~~~~~~-------------  164 (292)
T cd06644         100 MLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFG--VSAKNVKTL-------------  164 (292)
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCc--cceeccccc-------------
Confidence            753  368999999999999999999999999999999999999999999999999  322110000             


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (292)
T cd06644         165 --------------------------------------------------------------------------------  164 (292)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                .......+++.|+|||++..     ..+...+|.|++|+++|||++|..     
T Consensus       165 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~-----  213 (292)
T cd06644         165 --------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP-----  213 (292)
T ss_pred             --------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCC-----
Confidence                                      00112346778999998853     334467899999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          ||.. .++.+....+.....+....+..++..+.+||.+||..||++||+++++++||||.......-+..++.+|
T Consensus       214 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~  288 (292)
T cd06644         214 ----PHHE-LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRPLRELVAEA  288 (292)
T ss_pred             ----CCcc-ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchhHHHHHHHh
Confidence                7765 45566666666555555444556788999999999999999999999999999999988888888888877


Q ss_pred             HH
Q psy9736         394 KE  395 (400)
Q Consensus       394 ~~  395 (400)
                      +-
T Consensus       289 ~~  290 (292)
T cd06644         289 KA  290 (292)
T ss_pred             hc
Confidence            63

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.1e-36  Score=294.12  Aligned_cols=249  Identities=20%  Similarity=0.236  Sum_probs=200.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|.|+.|+++.+......+|+|.+....   ....+.+.+|+.+++.++|+||+++++++..+...++||||+++++|
T Consensus         9 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   88 (330)
T cd05601           9 VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDL   88 (330)
T ss_pred             EEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCH
Confidence            589999999999888888888888876432   22345678999999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..+......        
T Consensus        89 ~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg--~a~~~~~~~~~--------  158 (330)
T cd05601          89 LSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFG--SAARLTANKMV--------  158 (330)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCC--CCeECCCCCce--------
Confidence            999975  369999999999999999999999999999999999999999999999999  43311100000        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (330)
T cd05601         159 --------------------------------------------------------------------------------  158 (330)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee------cCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL------DKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                    ......||+.|+|||++.      ...+...+|.|++|+++|||++|.. 
T Consensus       159 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~-  207 (330)
T cd05601         159 ------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS-  207 (330)
T ss_pred             ------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCC-
Confidence                                          011225788888888876      3445578899999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||.. .+.......+..... ..++...+++..+.+||++||. ||++|||++++++||||+..
T Consensus       208 --------Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         208 --------PFHE-GTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             --------CCCC-CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence                    8876 455555666655422 2233334578899999999998 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.1e-36  Score=286.05  Aligned_cols=259  Identities=41%  Similarity=0.625  Sum_probs=217.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+++.++.+.+......+++|.+........+.+.+|+.+++.++|+||+++++++..++..++++||+++++|.++
T Consensus        27 lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~  106 (285)
T cd06648          27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDI  106 (285)
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHH
Confidence            58899999999987777788999987665555566788999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.......               
T Consensus       107 ~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g--~~~~~~~~~---------------  169 (285)
T cd06648         107 VTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFG--FCAQVSKEV---------------  169 (285)
T ss_pred             HHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccc--cchhhccCC---------------
Confidence            988789999999999999999999999999999999999999999999999999  332111000               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (285)
T cd06648         170 --------------------------------------------------------------------------------  169 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              .......|++.|+|||.+.+..+...+|.|++|+++|+|++|..         ||.
T Consensus       170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~---------p~~  216 (285)
T cd06648         170 ------------------------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP---------PYF  216 (285)
T ss_pred             ------------------------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCC---------CCc
Confidence                                    00112357788999999988777788999999999999999986         877


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhh
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI  390 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~  390 (400)
                      . .++......+....++.+..+..++..+.+||++||+.+|++|||+.++++||||++.+++..+.+|+
T Consensus       217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~  285 (285)
T cd06648         217 N-EPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSIVPLM  285 (285)
T ss_pred             C-CCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcchhcccC
Confidence            6 55666666666555455544444778999999999999999999999999999999999888777664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=6.8e-37  Score=289.85  Aligned_cols=245  Identities=22%  Similarity=0.297  Sum_probs=192.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.|+++.+......||+|.+..... .....+.+|+.++++++|+||+++++++.++...++++||+++ +|.+
T Consensus        13 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~   91 (288)
T cd07871          13 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQ   91 (288)
T ss_pred             EecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHH
Confidence            5899999999998887888888888764332 2345678999999999999999999999998999999999965 8988


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++...  .+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+.......            
T Consensus        92 ~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG--~~~~~~~~~------------  157 (288)
T cd07871          92 YLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFG--LARAKSVPT------------  157 (288)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCc--ceeeccCCC------------
Confidence            87643  47899999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (288)
T cd07871         158 --------------------------------------------------------------------------------  157 (288)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......||+.|+|||++.+ ..+...+|.||+|+++|+|++|..        
T Consensus       158 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~--------  202 (288)
T cd07871         158 ---------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRP--------  202 (288)
T ss_pred             ---------------------------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       00122357889999998875 456678999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCC-------CC--------------------cchhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         317 IPYLFILSCRQALYLIATNKK-------PE--------------------IKEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~-------~~--------------------~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                       ||.. .+..+.+..+.+...       +.                    .......+..+.|||++||+.||.+|||++
T Consensus       203 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~  280 (288)
T cd07871         203 -MFPG-STVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE  280 (288)
T ss_pred             -CCCC-CCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence             7765 344444433322100       00                    001123567899999999999999999999


Q ss_pred             HHhcCccc
Q psy9736         370 LLLKHPFL  377 (400)
Q Consensus       370 ~~l~hp~~  377 (400)
                      |+|+||||
T Consensus       281 ~~l~hp~f  288 (288)
T cd07871         281 AALRHSYF  288 (288)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=6.7e-36  Score=281.78  Aligned_cols=261  Identities=30%  Similarity=0.515  Sum_probs=211.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.|+++.+......+++|.+........+.+.+|+.+++.++|+|++++++.+..+...++++||+++++|..+
T Consensus        13 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~   92 (282)
T cd06643          13 LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV   92 (282)
T ss_pred             cccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHH
Confidence            68999999999999888888888888655555567788999999999999999999999999999999999999999887


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+.......             
T Consensus        93 ~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg--~~~~~~~~~-------------  157 (282)
T cd06643          93 MLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRTI-------------  157 (282)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccc--ccccccccc-------------
Confidence            753  468999999999999999999999999999999999999999999999999  333111000             


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (282)
T cd06643         158 --------------------------------------------------------------------------------  157 (282)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                .......|++.|+|||++.     ...+...+|.|++|+++|||++|..     
T Consensus       158 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~-----  206 (282)
T cd06643         158 --------------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEP-----  206 (282)
T ss_pred             --------------------------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCC-----
Confidence                                      0012235778899999874     2334467999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          ||.. .++.+....+....++.+..+..++..+.+||++||..||++|||++++++||||+.... ....++|-++
T Consensus       207 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~-~~~~~~~~~~  280 (282)
T cd06643         207 ----PHHE-LNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN-KPIRELIAEA  280 (282)
T ss_pred             ----Cccc-cCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC-CCHHHHHHhh
Confidence                7765 566666666766655555555568889999999999999999999999999999997544 3355555443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=2.9e-36  Score=290.32  Aligned_cols=245  Identities=21%  Similarity=0.280  Sum_probs=199.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHH-HHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEIL-VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+......||+|.+....   ....+.+..|.. +++.++|+||+++++.+..+...++||||+++++
T Consensus         3 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~   82 (323)
T cd05575           3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGE   82 (323)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCC
Confidence            689999999999988888888998875332   122344555655 4577899999999999999999999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+... .+++..++.++.||+.||.|||+.+++||||||+||+++.++.++|+|||  ++.....    .       
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg--~~~~~~~----~-------  149 (323)
T cd05575          83 LFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFG--LCKEGIE----H-------  149 (323)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccC--CCccccc----C-------
Confidence            99888754 78999999999999999999999999999999999999999999999999  3321000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (323)
T cd05575         150 --------------------------------------------------------------------------------  149 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..+...+|.|++|+++|||++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~-------  194 (323)
T cd05575         150 ----------------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLP-------  194 (323)
T ss_pred             ----------------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCC-------
Confidence                                        000123468999999999999888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~~~  379 (400)
                        ||.. .+..+....+..... .+  +..++..+.+||++||+.||++||++    .++++||||..
T Consensus       195 --pf~~-~~~~~~~~~i~~~~~-~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         195 --PFYS-RDTAEMYDNILNKPL-RL--KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             --CCCC-CCHHHHHHHHHcCCC-CC--CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence              8876 555555666655532 22  23468899999999999999999998    69999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.1e-36  Score=290.97  Aligned_cols=248  Identities=20%  Similarity=0.312  Sum_probs=197.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+...   .....+.+.+|+.++.++ +|+||+++++++..+...++||||+++++
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~   82 (329)
T cd05618           3 IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD   82 (329)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCC
Confidence            69999999999987777777777776532   222345577899988876 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++....    ..       
T Consensus        83 L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG--~~~~~~----~~-------  149 (329)
T cd05618          83 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGL----RP-------  149 (329)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCC--cccccc----CC-------
Confidence            9888765 479999999999999999999999999999999999999999999999999  332100    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (329)
T cd05618         150 --------------------------------------------------------------------------------  149 (329)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ........||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~-------  194 (329)
T cd05618         150 ----------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS-------  194 (329)
T ss_pred             ----------------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCC-------
Confidence                                        000123478999999999998888889999999999999999987       


Q ss_pred             ccCcchh-------hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc------HHHHhcCcccccc
Q psy9736         316 LIPYLFI-------LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s------~~~~l~hp~~~~~  380 (400)
                        ||...       ........+........+  +..++..+.+||.+||+.||++|++      ++++++||||+..
T Consensus       195 --Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         195 --PFDIVGSSDNPDQNTEDYLFQVILEKQIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             --CCccCCCcCCcccccHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence              77421       112233333333333333  3347888999999999999999998      5899999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-36  Score=282.81  Aligned_cols=264  Identities=33%  Similarity=0.504  Sum_probs=223.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.+|++.+......|++|.+.... ......+.+|+.+++.++|+||+++++++..+...++++||+++++|.+
T Consensus         9 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   88 (274)
T cd06609           9 IGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLD   88 (274)
T ss_pred             hcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHH
Confidence            588999999999888888889999886553 2334668899999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++....+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........             
T Consensus        89 ~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g--~~~~~~~~~~-------------  153 (274)
T cd06609          89 LLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFG--VSGQLTSTMS-------------  153 (274)
T ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccc--cceeeccccc-------------
Confidence            9988789999999999999999999999999999999999999999999999999  3331111100             


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (274)
T cd06609         154 --------------------------------------------------------------------------------  153 (274)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                                ......|++.|+|||.+.+..+...+|.|++|+++|+|++|..         ||
T Consensus       154 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~---------p~  198 (274)
T cd06609         154 --------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP---------PL  198 (274)
T ss_pred             --------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCC---------Cc
Confidence                                      0122357788999999998887889999999999999999986         87


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHH
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  396 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~  396 (400)
                      .. .++......+.....+.+.... ++..+.+++.+||..||++|||++++++||||+.+...+.+..|....|++
T Consensus       199 ~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~  273 (274)
T cd06609         199 SD-LHPMRVLFLIPKNNPPSLEGNK-FSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKW  273 (274)
T ss_pred             cc-CchHHHHHHhhhcCCCCCcccc-cCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcccHHHHHHHHHHhc
Confidence            65 5566666667666655554332 788899999999999999999999999999999988888888888887765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.6e-36  Score=296.90  Aligned_cols=283  Identities=19%  Similarity=0.203  Sum_probs=205.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......+|+|.+....   ....+.+.+|+.++++++|+||+++++.+.++..+|+||||+++++|
T Consensus         9 LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L   88 (363)
T cd05628           9 IGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDM   88 (363)
T ss_pred             EEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcH
Confidence            689999999999888777888888875332   22345678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..........        
T Consensus        89 ~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFG--la~~~~~~~~~~--------  158 (363)
T cd05628          89 MTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFG--LCTGLKKAHRTE--------  158 (363)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeecc--Cccccccccccc--------
Confidence            999875 479999999999999999999999999999999999999999999999999  444222111000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                            .|....   ...+                             .                ...+.....     .
T Consensus       159 ------~~~~~~---~~~~-----------------------------~----------------~~~~~~~~~-----~  179 (363)
T cd05628         159 ------FYRNLN---HSLP-----------------------------S----------------DFTFQNMNS-----K  179 (363)
T ss_pred             ------cccccc---cccc-----------------------------c----------------ccccccccc-----c
Confidence                  000000   0000                             0                000000000     0


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                   ...+.   . ...........+||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       180 -------------~~~~~---~-~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~--------  234 (363)
T cd05628         180 -------------RKAET---W-KRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP--------  234 (363)
T ss_pred             -------------cccch---h-hhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC--------
Confidence                         00000   0 0000011235689999999999999888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhh---hhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVET---RASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~---R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .++.+....+.... ...++....+++.+.+||.+|+. +|.+   ||+++|+++||||+..
T Consensus       235 -Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         235 -PFCS-ETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             -CCCC-CCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence             8876 56666666666532 22233333478899999999775 5554   5899999999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.8e-36  Score=290.99  Aligned_cols=246  Identities=20%  Similarity=0.270  Sum_probs=199.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+..|..++... +|+||+++++++..++.+|+||||+.+++
T Consensus         3 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~   82 (316)
T cd05620           3 LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGD   82 (316)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCc
Confidence            689999999999888888888888875431   22345567788888764 89999999999999999999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+... .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......          
T Consensus        83 L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~----------  150 (316)
T cd05620          83 LMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFG--MCKENVFGD----------  150 (316)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccC--CCeecccCC----------
Confidence            99888754 78999999999999999999999999999999999999999999999999  332000000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (316)
T cd05620         151 --------------------------------------------------------------------------------  150 (316)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~-------  194 (316)
T cd05620         151 -----------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQS-------  194 (316)
T ss_pred             -----------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCC-------
Confidence                                         00123468999999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+... .+.++  ..++..+.+||++||+.||++|+++ +++++||||+..
T Consensus       195 --Pf~~-~~~~~~~~~~~~~-~~~~~--~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         195 --PFHG-DDEDELFESIRVD-TPHYP--RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             --CCCC-CCHHHHHHHHHhC-CCCCC--CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence              8876 4444444444433 33332  3478899999999999999999998 578899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.4e-36  Score=291.98  Aligned_cols=248  Identities=23%  Similarity=0.365  Sum_probs=199.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.|+++.+......+++|.+..... ...+++.+|+.++++++|+||+++++++..++..+++|||+++++|.+
T Consensus        13 lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (331)
T cd06649          13 LGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ   92 (331)
T ss_pred             ecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHH
Confidence            6899999999999988888899998865432 234678999999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||  ++.....    .         
T Consensus        93 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~----~---------  157 (331)
T cd06649          93 VLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLID----S---------  157 (331)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCc--ccccccc----c---------
Confidence            98754 689999999999999999999986 69999999999999999999999999  3331100    0         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (331)
T cd06649         158 --------------------------------------------------------------------------------  157 (331)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......||+.|+|||++.+..++..+|.||+|+++|||++|..         
T Consensus       158 ----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~---------  200 (331)
T cd06649         158 ----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRY---------  200 (331)
T ss_pred             ----------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCC---------
Confidence                                        0112368889999999998888889999999999999999976         


Q ss_pred             CcchhhcHHH----------------------------------------------HHHHHHhCCCCCcchhhhhcHHHH
Q psy9736         318 PYLFILSCRQ----------------------------------------------ALYLIATNKKPEIKEKEKLSQIFQ  351 (400)
Q Consensus       318 P~~~~~~~~~----------------------------------------------~~~~i~~~~~~~~~~~~~~s~~~~  351 (400)
                      ||.. .+..+                                              ....+.....+..+ ...++..+.
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~  278 (331)
T cd06649         201 PIPP-PDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP-NGVFTPDFQ  278 (331)
T ss_pred             CCCC-CCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC-CccccHHHH
Confidence            6643 11111                                              11112222222221 123677899


Q ss_pred             HHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         352 DFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       352 dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +||.+||+.||++|||+.++++||||+....
T Consensus       279 ~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         279 EFVNKCLIKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             HHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence            9999999999999999999999999997544

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.1e-36  Score=290.64  Aligned_cols=246  Identities=20%  Similarity=0.281  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||.+.+   ......+|+|.+....  ......+.+|+.++++++|+||+++++++..++..|+||||++++
T Consensus         4 lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   83 (318)
T cd05582           4 LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGG   83 (318)
T ss_pred             eeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCC
Confidence            68899998887643   3455667777665322  123355778999999999999999999999999999999999999


Q ss_pred             ChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          76 SLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        76 ~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +|.+.+... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......         
T Consensus        84 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg--~~~~~~~~~---------  152 (318)
T cd05582          84 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG--LSKESIDHE---------  152 (318)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeecc--CCcccCCCC---------
Confidence            999988654 68999999999999999999999999999999999999999999999999  333110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (318)
T cd05582         153 --------------------------------------------------------------------------------  152 (318)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..+...+|.|++|+++|||++|..      
T Consensus       153 ------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~------  196 (318)
T cd05582         153 ------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSL------  196 (318)
T ss_pred             ------------------------------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCC------
Confidence                                          00123468899999999988877789999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                         ||.. .+.......+.+... .+  +..++..+.+||++||+.||++||+     ++++++||||+..
T Consensus       197 ---p~~~-~~~~~~~~~i~~~~~-~~--p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         197 ---PFQG-KDRKETMTMILKAKL-GM--PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             ---CCCC-CCHHHHHHHHHcCCC-CC--CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence               8876 556666666665532 22  3347788999999999999999999     7889999999753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=2.3e-36  Score=290.30  Aligned_cols=246  Identities=21%  Similarity=0.303  Sum_probs=199.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+..|..++..+ +|+||+++++++..++..++||||+++++
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~   82 (316)
T cd05592           3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGD   82 (316)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCc
Confidence            699999999999887777778888775331   22334556677777654 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+.......          
T Consensus        83 L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg--~a~~~~~~~----------  150 (316)
T cd05592          83 LMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFG--MCKENMNGE----------  150 (316)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCc--CCeECCCCC----------
Confidence            9988865 479999999999999999999999999999999999999999999999999  332100000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (316)
T cd05592         151 --------------------------------------------------------------------------------  150 (316)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~-------  194 (316)
T cd05592         151 -----------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS-------  194 (316)
T ss_pred             -----------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCC-------
Confidence                                         01223478999999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH-HHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS-LLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~-~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+... .+.+  +..++..+.+||.+||+.||++||++. ++++||||...
T Consensus       195 --Pf~~-~~~~~~~~~i~~~-~~~~--~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         195 --PFHG-EDEDELFDSILND-RPHF--PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             --CCCC-CCHHHHHHHHHcC-CCCC--CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence              8876 4555555555443 2333  234778899999999999999999864 88899999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.5e-36  Score=307.37  Aligned_cols=248  Identities=23%  Similarity=0.317  Sum_probs=207.2

Q ss_pred             CCcceEEEEEecCCCce-eEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRF-FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|+|+++.||.+.+... ..+|++|.+........+.+.+|+.+++.++|+||+++++++..++..|+||||+++++|.+
T Consensus        75 lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~  154 (478)
T PTZ00267         75 VGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNK  154 (478)
T ss_pred             EEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHH
Confidence            58899999999877666 67888888766655556678899999999999999999999999999999999999999998


Q ss_pred             HHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+..     ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.........       
T Consensus       155 ~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFg--la~~~~~~~~~-------  225 (478)
T PTZ00267        155 QIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFG--FSKQYSDSVSL-------  225 (478)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCc--CceecCCcccc-------
Confidence            7753     258999999999999999999999999999999999999999999999999  44311110000       


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       226 --------------------------------------------------------------------------------  225 (478)
T PTZ00267        226 --------------------------------------------------------------------------------  225 (478)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......+||+.|+|||++.+..++..+|.||+||++|||++|..      
T Consensus       226 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~------  269 (478)
T PTZ00267        226 ------------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHR------  269 (478)
T ss_pred             ------------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCC------
Confidence                                          01233478999999999998888889999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||.. .+..+.+..+..+....+  +..++..+.+||.+||+.||++||++++++.|||++.
T Consensus       270 ---Pf~~-~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        270 ---PFKG-PSQREIMQQVLYGKYDPF--PCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             ---CCCC-CCHHHHHHHHHhCCCCCC--CccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence               8866 566677777766644433  3347889999999999999999999999999999974

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.9e-36  Score=291.02  Aligned_cols=246  Identities=21%  Similarity=0.273  Sum_probs=202.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+...   .....+.+.+|+.+++.+ +|+||+++++++...+.+|+||||+++++
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   82 (318)
T cd05570           3 LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGD   82 (318)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCC
Confidence            68999999999988777777888876532   223345677899999887 79999999999999999999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+...    ...       
T Consensus        83 L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg--~~~~~----~~~-------  149 (318)
T cd05570          83 LMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFG--MCKEG----ILG-------  149 (318)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccC--CCeec----CcC-------
Confidence            99888765 79999999999999999999999999999999999999999999999999  33200    000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (318)
T cd05570         150 --------------------------------------------------------------------------------  149 (318)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..+...+|.||+|+++|+|++|..       
T Consensus       150 ----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~-------  194 (318)
T cd05570         150 ----------------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQS-------  194 (318)
T ss_pred             ----------------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCC-------
Confidence                                        000123368899999999999888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+..... .+  +..++..+.+||++||+.||++|||+     .++++||||+..
T Consensus       195 --pf~~-~~~~~~~~~i~~~~~-~~--~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         195 --PFEG-DDEDELFQSILEDEV-RY--PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             --CCCC-CCHHHHHHHHHcCCC-CC--CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence              8865 455555555554432 22  33478899999999999999999999     999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.2e-36  Score=290.97  Aligned_cols=248  Identities=21%  Similarity=0.291  Sum_probs=192.0

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccc----cCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITL----AQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~----~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++..   ......||+|.+..    ......+.+.+|+.+++.+ +|+||+++++++..++..+++|||+
T Consensus         8 lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (332)
T cd05614           8 LGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYV   87 (332)
T ss_pred             EeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCC
Confidence            68899999987543   23445566665532    2223345678999999999 5999999999999999999999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++++|.+.+.. ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++........     
T Consensus        88 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG--~~~~~~~~~~-----  160 (332)
T cd05614          88 SGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFG--LSKEFLSEEK-----  160 (332)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCc--CCccccccCC-----
Confidence            99999998865 478999999999999999999999999999999999999999999999999  3331100000     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (332)
T cd05614         161 --------------------------------------------------------------------------------  160 (332)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                       ......+||+.|+|||++.+.. +...+|+||+|+++|||++|..  
T Consensus       161 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~--  205 (332)
T cd05614         161 ---------------------------------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGAS--  205 (332)
T ss_pred             ---------------------------------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCC--
Confidence                                             0012346899999999988653 5578999999999999999987  


Q ss_pred             cccccccCcchh---hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         311 FQPHFLIPYLFI---LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       311 ~g~~~~~P~~~~---~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                             ||...   .........+.... +.+  +..++..+.+||.+||+.||++||     +++++++||||+..
T Consensus       206 -------pf~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         206 -------PFTLEGERNTQSEVSRRILKCD-PPF--PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             -------CCCCCCCCCCHHHHHHHHhcCC-CCC--CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence                   87542   12223333333332 233  234788999999999999999999     88899999999863

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.4e-36  Score=294.22  Aligned_cols=283  Identities=20%  Similarity=0.224  Sum_probs=206.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......||+|.+....   ....+.+.+|+.++..++|+||+++++.+..++.+|+||||+++++|
T Consensus         9 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L   88 (360)
T cd05627           9 IGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDM   88 (360)
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccH
Confidence            689999999999888888888888875321   22346678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.+ +.+++..++.++.|++.||.|||+.+|+||||||+||+++.+|.++|+|||  ++..+........       
T Consensus        89 ~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG--~~~~~~~~~~~~~-------  159 (360)
T cd05627          89 MTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFG--LCTGLKKAHRTEF-------  159 (360)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeecc--CCccccccccccc-------
Confidence            999865 478999999999999999999999999999999999999999999999999  4432211111000       


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                             |   +......+.                                             ...+....       
T Consensus       160 -------~---~~~~~~~~~---------------------------------------------~~~~~~~~-------  177 (360)
T cd05627         160 -------Y---RNLTHNPPS---------------------------------------------DFSFQNMN-------  177 (360)
T ss_pred             -------c---cccccCCcc---------------------------------------------cccccccc-------
Confidence                   0   000000000                                             00000000       


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                             .       ..... .............+||+.|+|||++.+..+...+|.||+||++|||++|..        
T Consensus       178 -------~-------~~~~~-~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~--------  234 (360)
T cd05627         178 -------S-------KRKAE-TWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP--------  234 (360)
T ss_pred             -------c-------ccccc-cccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC--------
Confidence                   0       00000 000000111234689999999999999888899999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhh---cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~---s~~~~l~hp~~~~~  380 (400)
                       ||.. .++......+.... ...++....+++.+.+||.+|+. ||.+|+   +++++++||||+..
T Consensus       235 -Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         235 -PFCS-ETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence             8876 56666666665432 12223233478899999999885 999998   48999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=3.5e-36  Score=295.31  Aligned_cols=250  Identities=21%  Similarity=0.260  Sum_probs=202.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.|+++.+......+|+|.+...   .....+.+.+|+.+++.++|+||+++++++..+...++||||+++++|
T Consensus        51 lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L  130 (371)
T cd05622          51 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL  130 (371)
T ss_pred             EeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcH
Confidence            68999999999988888888888876432   122345578899999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+++....+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+........           
T Consensus       131 ~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG--~a~~~~~~~~-----------  197 (371)
T cd05622         131 VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGM-----------  197 (371)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCC--ceeEcCcCCc-----------
Confidence            999988789999999999999999999999999999999999999999999999999  3331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       198 --------------------------------------------------------------------------------  197 (371)
T cd05622         198 --------------------------------------------------------------------------------  197 (371)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC----CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN----KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                 ....+.+||+.|+|||++....    +...+|.||+|+++|||++|..     
T Consensus       198 ---------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~-----  245 (371)
T cd05622         198 ---------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT-----  245 (371)
T ss_pred             ---------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCC-----
Confidence                                       0012347899999999987643    4578999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                          ||.. .+.......+.... ...++...+++..+.+||..||..++.+  |++++++++||||++.
T Consensus       246 ----Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         246 ----PFYA-DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence                8876 56666666666543 2234444568899999999999844443  7899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.5e-36  Score=288.99  Aligned_cols=246  Identities=22%  Similarity=0.304  Sum_probs=200.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHh-CCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+..|..+++. ++|+||+++++++.+++.++++|||+++++
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~   82 (316)
T cd05619           3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGD   82 (316)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCc
Confidence            699999999999888888888888775431   2234556778888876 499999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |..++.. ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.......          
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~----------  150 (316)
T cd05619          83 LMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFG--MCKENMLGD----------  150 (316)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCC--cceECCCCC----------
Confidence            9999875 478999999999999999999999999999999999999999999999999  332100000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (316)
T cd05619         151 --------------------------------------------------------------------------------  150 (316)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   .......||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~-------  194 (316)
T cd05619         151 -----------------------------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQS-------  194 (316)
T ss_pred             -----------------------------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCC-------
Confidence                                         00123368899999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH-HHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS-LLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~-~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+.... +.++  ..++..+.+||.+||+.||++|+++. ++++||||+..
T Consensus       195 --pf~~-~~~~~~~~~i~~~~-~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         195 --PFHG-HDEEELFQSIRMDN-PCYP--RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             --CCCC-CCHHHHHHHHHhCC-CCCC--ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence              8876 44555555444433 3332  34788899999999999999999996 89999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-36  Score=288.87  Aligned_cols=247  Identities=22%  Similarity=0.287  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhC---CCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMREN---KHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+......||+|.+.....   .....+..|..++...   .|+||+++++++..+...|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999998888888888888753221   1223345677777665   799999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|...+.. +.+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.....    .     
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg--~a~~~~~----~-----  149 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFG--LSKANLT----D-----  149 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCC--cCcCCCC----C-----
Confidence            999988865 469999999999999999999999999999999999999999999999999  3321000    0     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (330)
T cd05586         150 --------------------------------------------------------------------------------  149 (330)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    ....+..+||+.|+|||++.+.. +...+|.|++|+++|+|++|..    
T Consensus       150 ------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~----  195 (330)
T cd05586         150 ------------------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWS----  195 (330)
T ss_pred             ------------------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCC----
Confidence                                          00123347899999999987643 5678999999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh----cHHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA----SASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~----s~~~~l~hp~~~~~  380 (400)
                           ||.. .+..+....+..+... ++ ...++..+.+||++||..||++||    ++.++++||||+..
T Consensus       196 -----Pf~~-~~~~~~~~~i~~~~~~-~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         196 -----PFYA-EDTQQMYRNIAFGKVR-FP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             -----CCCC-CCHHHHHHHHHcCCCC-CC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence                 8876 4555555555554322 22 123678999999999999999998    79999999999863

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0584|consensus

Probab=100.00  E-value=1.3e-36  Score=297.44  Aligned_cols=245  Identities=25%  Similarity=0.403  Sum_probs=212.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC----cchHHHHHHHHHHHHhCCCCCcccccceeEeCC--EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ----QPKKELIINEILVMRENKHPNIVNYLDSYLVGE--ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~   74 (400)
                      ||+|+|.+||++-|...+..||...++...    ....++|..|+.+|+.|+|+||++||++|.+..  .+.+|+|++.+
T Consensus        48 LGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TS  127 (632)
T KOG0584|consen   48 LGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTS  127 (632)
T ss_pred             cccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccC
Confidence            699999999999999999999988877542    234588999999999999999999999998765  48899999999


Q ss_pred             CChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhc
Q psy9736          75 GSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        75 ~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~--~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      |+|..+.++. .+....++.+++||+.||.|||++  .|+|||||.+||+++.+ |.+||+|+|  +|.......     
T Consensus       128 GtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLG--LAtl~r~s~-----  200 (632)
T KOG0584|consen  128 GTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLG--LATLLRKSH-----  200 (632)
T ss_pred             CcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchh--HHHHhhccc-----
Confidence            9999999864 789999999999999999999987  99999999999999766 999999999  665221111     


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       201 --------------------------------------------------------------------------------  200 (632)
T KOG0584|consen  201 --------------------------------------------------------------------------------  200 (632)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                          ..+..|||.|||||+.. ..|....|+|++|+.|+||.|+++  
T Consensus       201 ------------------------------------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eY--  241 (632)
T KOG0584|consen  201 ------------------------------------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEY--  241 (632)
T ss_pred             ------------------------------------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccC--
Confidence                                                33468999999999988 557789999999999999999999  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                             ||..+.++-+++.++.+|.+|.--..- -.+.+++||.+||.. .++|+|+.|+|.||||+..
T Consensus       242 -------PYsEC~n~AQIYKKV~SGiKP~sl~kV-~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  242 -------PYSECTNPAQIYKKVTSGIKPAALSKV-KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             -------ChhhhCCHHHHHHHHHcCCCHHHhhcc-CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence                   999999999999999999765321111 134799999999998 9999999999999999975

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=5.3e-36  Score=288.62  Aligned_cols=246  Identities=17%  Similarity=0.227  Sum_probs=200.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCC-CCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+...   .....+.+..|+.++..+.| ++|+++++++...+..|+||||+++++
T Consensus         8 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~   87 (324)
T cd05587           8 LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD   87 (324)
T ss_pred             EeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCc
Confidence            68999999999988777777888876532   22344667889999999865 568889999998999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+.+.. ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++.....    .       
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg--~~~~~~~----~-------  154 (324)
T cd05587          88 LMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFG--MCKENIF----G-------  154 (324)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecC--cceecCC----C-------
Confidence            9988865 468999999999999999999999999999999999999999999999999  3320000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (324)
T cd05587         155 --------------------------------------------------------------------------------  154 (324)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..++..+|.||+|+++|+|++|..       
T Consensus       155 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~-------  199 (324)
T cd05587         155 ----------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP-------  199 (324)
T ss_pred             ----------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCC-------
Confidence                                        000123468999999999999888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+..... .+  +..++..+.+|+++||+.||++|+++     +++++||||...
T Consensus       200 --pf~~-~~~~~~~~~i~~~~~-~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         200 --PFDG-EDEDELFQSIMEHNV-SY--PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             --CCCC-CCHHHHHHHHHcCCC-CC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence              8876 555566666655432 22  33478899999999999999999987     899999999863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=8e-36  Score=283.29  Aligned_cols=261  Identities=38%  Similarity=0.581  Sum_probs=217.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.|+.+........|++|.+........+.+.+|+.+++.++|+|++++++.+..+...++++||+++++|.++
T Consensus        28 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (292)
T cd06657          28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  107 (292)
T ss_pred             cCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHH
Confidence            68999999999988888889999987655555567789999999999999999999999999999999999999999998


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +..+.+++..+..++.|++.++.|||+.+++|+||+|+||+++.++.++++|||  ..........              
T Consensus       108 ~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg--~~~~~~~~~~--------------  171 (292)
T cd06657         108 VTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG--FCAQVSKEVP--------------  171 (292)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccc--cceecccccc--------------
Confidence            877788999999999999999999999999999999999999999999999999  2221100000              


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (292)
T cd06657         172 --------------------------------------------------------------------------------  171 (292)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                               ......|++.|+|||.+.+..++..+|.|++|+++|+|++|..         ||.
T Consensus       172 -------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~---------p~~  217 (292)
T cd06657         172 -------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP---------PYF  217 (292)
T ss_pred             -------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                     0112356788999999887777788999999999999999987         776


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                      . .+.......+....++.+.....++..+.+++.+||+.||.+||+++++++||||....++++-+++|+.
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~~~~~~~~  288 (292)
T cd06657         218 N-EPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCIVPLMRQ  288 (292)
T ss_pred             C-CCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCcccccHHHH
Confidence            5 4444444444444444444444577889999999999999999999999999999998888888888864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=6.3e-36  Score=288.22  Aligned_cols=246  Identities=21%  Similarity=0.282  Sum_probs=198.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHH-HHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEIL-VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+...   .....+.+.+|.. +++.++|+||+++++++..++..+++|||+++++
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (325)
T cd05604           3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGE   82 (325)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCC
Confidence            69999999999988777777888876432   1223344556655 4677899999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..++.++.||+.||.|||+.|++||||||+||+++.++.++|+|||  ++....    ..       
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG--~~~~~~----~~-------  149 (325)
T cd05604          83 LFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFG--LCKEGI----AQ-------  149 (325)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecC--CcccCC----CC-------
Confidence            9888765 478999999999999999999999999999999999999999999999999  332100    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (325)
T cd05604         150 --------------------------------------------------------------------------------  149 (325)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~-------  194 (325)
T cd05604         150 ----------------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLP-------  194 (325)
T ss_pred             ----------------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCC-------
Confidence                                        000123468999999999999888889999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+...... +  ....+..+.++|++||+.||++||++    .++++||||...
T Consensus       195 --pf~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         195 --PFYC-RDVAEMYDNILHKPLV-L--RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             --CCCC-CCHHHHHHHHHcCCcc-C--CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence              8876 5555555666554322 2  22367889999999999999999987    489999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.7e-36  Score=290.75  Aligned_cols=252  Identities=19%  Similarity=0.226  Sum_probs=190.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~   73 (400)
                      ||+|+++.||++.+......||+|.+...  ......++.+|+.++++++|+||+++++++...     ...|++|||+.
T Consensus         8 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~   87 (338)
T cd07859           8 IGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME   87 (338)
T ss_pred             EeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC
Confidence            68999999999998888889999987632  222345688999999999999999999987543     25899999994


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       ++|.+.+... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........    
T Consensus        88 -~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg--~~~~~~~~~~~~----  160 (338)
T cd07859          88 -SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFG--LARVAFNDTPTA----  160 (338)
T ss_pred             -CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCc--cccccccccCcc----
Confidence             6898888754 68999999999999999999999999999999999999999999999999  433110000000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (338)
T cd07859         161 --------------------------------------------------------------------------------  160 (338)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                      .......||+.|+|||++.+  ..+...+|.||+|+++|||++|..  
T Consensus       161 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~--  206 (338)
T cd07859         161 --------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP--  206 (338)
T ss_pred             --------------------------------ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC--
Confidence                                            00123468899999999875  556678999999999999999975  


Q ss_pred             cccccccCcchhhcHHHHHHHH---------------------------HhCCCCCcc-hhhhhcHHHHHHHHHhhhhhh
Q psy9736         311 FQPHFLIPYLFILSCRQALYLI---------------------------ATNKKPEIK-EKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i---------------------------~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP  362 (400)
                             ||.. .+....+..+                           ....+..+. .....++.+.+||.+||+.||
T Consensus       207 -------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  278 (338)
T cd07859         207 -------LFPG-KNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDP  278 (338)
T ss_pred             -------CCCC-CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCc
Confidence                   6644 2221111111                           011111110 011356678999999999999


Q ss_pred             hhhhcHHHHhcCccccccC
Q psy9736         363 ETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~  381 (400)
                      ++|||++++|+||||+...
T Consensus       279 ~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         279 KDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             ccCCCHHHHhcCchhhhcC
Confidence            9999999999999998633

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.2e-36  Score=292.81  Aligned_cols=246  Identities=26%  Similarity=0.394  Sum_probs=193.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.||++.+......|++|.+..... ...+.+.+|+.+++.++|+||+++++++..++.+++++||+++++|..
T Consensus        82 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  161 (353)
T PLN00034         82 IGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG  161 (353)
T ss_pred             ccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence            6899999999998887778889988754332 235678999999999999999999999999999999999999998864


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ..   ...+..+..++.||+.||.|||+.+++||||||+||+++.++.++|+|||  ++.......              
T Consensus       162 ~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG--~~~~~~~~~--------------  222 (353)
T PLN00034        162 TH---IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFG--VSRILAQTM--------------  222 (353)
T ss_pred             cc---cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccc--cceeccccc--------------
Confidence            32   35677888999999999999999999999999999999999999999999  333111000              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       223 --------------------------------------------------------------------------------  222 (353)
T PLN00034        223 --------------------------------------------------------------------------------  222 (353)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-----CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-----NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                               .......||+.|+|||++...     .....+|+|++|+++|||++|..      
T Consensus       223 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~------  271 (353)
T PLN00034        223 -------------------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF------  271 (353)
T ss_pred             -------------------------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCC------
Confidence                                     001223688899999987532     12247899999999999999987      


Q ss_pred             cccCcchhh--cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         315 FLIPYLFIL--SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       315 ~~~P~~~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                         ||....  +.......+.....+..  +..++..+.+||.+||+.||++|||+.|+++||||....
T Consensus       272 ---pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        272 ---PFGVGRQGDWASLMCAICMSQPPEA--PATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             ---CCCCCCCccHHHHHHHHhccCCCCC--CCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence               886321  12222333333333322  334788999999999999999999999999999999854

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=8.4e-36  Score=287.68  Aligned_cols=248  Identities=20%  Similarity=0.283  Sum_probs=200.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+....   ....+.+.+|+.++.++ +|+||+++++++.....+++||||+++++
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   82 (327)
T cd05617           3 IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGD   82 (327)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCc
Confidence            699999999999877777777777775331   22345578999999888 69999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||  ++....    ..       
T Consensus        83 L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg--~~~~~~----~~-------  149 (327)
T cd05617          83 LMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYG--MCKEGL----GP-------  149 (327)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccc--cceecc----CC-------
Confidence            9988865 479999999999999999999999999999999999999999999999999  332100    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (327)
T cd05617         150 --------------------------------------------------------------------------------  149 (327)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       150 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~-------  194 (327)
T cd05617         150 ----------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS-------  194 (327)
T ss_pred             ----------------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCC-------
Confidence                                        000123478999999999998888889999999999999999987       


Q ss_pred             ccCcch-----hhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc------HHHHhcCcccccc
Q psy9736         316 LIPYLF-----ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~-----~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s------~~~~l~hp~~~~~  380 (400)
                        ||..     ..+..+...+.....+..+  +..++..+.++|.+||+.||++|++      .+++++||||+..
T Consensus       195 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         195 --PFDIITDNPDMNTEDYLFQVILEKPIRI--PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             --CCCccCCCcccccHHHHHHHHHhCCCCC--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence              8843     1233444555554444333  3457889999999999999999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.7e-36  Score=283.72  Aligned_cols=263  Identities=32%  Similarity=0.481  Sum_probs=217.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|.++.||.+.+......|++|.+.... ....+.+.+|+.++++++|+||+++++.+..+...++|+||+++++|.+
T Consensus        12 l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   91 (277)
T cd06642          12 IGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALD   91 (277)
T ss_pred             hcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHH
Confidence            589999999999887777889999876443 2345678899999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++..+.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........             
T Consensus        92 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg--~~~~~~~~~~-------------  156 (277)
T cd06642          92 LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFG--VAGQLTDTQI-------------  156 (277)
T ss_pred             HhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEcccc--ccccccCcch-------------
Confidence            9988889999999999999999999999999999999999999999999999999  3331111000             


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (277)
T cd06642         157 --------------------------------------------------------------------------------  156 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                                ......|+..|+|||.+.+..+...+|.|++|+++|||++|..         |+
T Consensus       157 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~---------p~  201 (277)
T cd06642         157 --------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---------PN  201 (277)
T ss_pred             --------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCC---------CC
Confidence                                      0112346778999999988777788999999999999999986         76


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc-cCCCCCcchhhhhhHHH
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI-ARPLASLTPLIMAAKEA  396 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~-~~~~~~l~~~~~~~~~~  396 (400)
                      .. ..+......+..+.++.+.  ...+..+.++|.+||+.+|++|||+.++++||||.. ...++.+..||..+|++
T Consensus       202 ~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd06642         202 SD-LHPMRVLFLIPKNSPPTLE--GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRW  276 (277)
T ss_pred             cc-cchhhHHhhhhcCCCCCCC--cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhHHHHHHHHHHhhcc
Confidence            65 4455555555555444432  346778999999999999999999999999999997 56688889999888764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=9.4e-36  Score=288.10  Aligned_cols=249  Identities=22%  Similarity=0.351  Sum_probs=198.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+|+.||++.+......+++|.+..... ...+.+.+|+.++++++|+||++++++|..++..+++|||+++++|.+
T Consensus        13 lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (333)
T cd06650          13 LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ   92 (333)
T ss_pred             ccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHH
Confidence            6899999999999888888888888765422 234678999999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||  ++......             
T Consensus        93 ~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg--~~~~~~~~-------------  157 (333)
T cd06650          93 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLIDS-------------  157 (333)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCC--cchhhhhh-------------
Confidence            98754 689999999999999999999985 79999999999999999999999999  33311000             


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (333)
T cd06650         158 --------------------------------------------------------------------------------  157 (333)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ..+...||+.|+|||++.+..+...+|.|++|+++|+|++|..         
T Consensus       158 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~---------  200 (333)
T cd06650         158 ----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRY---------  200 (333)
T ss_pred             ----------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCC---------
Confidence                                        0112357889999999988777788999999999999999976         


Q ss_pred             Ccchhhc-------------------------------------------HHHHHHHHHhCCCCCcchhhhhcHHHHHHH
Q psy9736         318 PYLFILS-------------------------------------------CRQALYLIATNKKPEIKEKEKLSQIFQDFL  354 (400)
Q Consensus       318 P~~~~~~-------------------------------------------~~~~~~~i~~~~~~~~~~~~~~s~~~~dli  354 (400)
                      ||.....                                           .......+.+..++.+.. ..++..+.+||
T Consensus       201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  279 (333)
T cd06650         201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS-GVFGAEFQDFV  279 (333)
T ss_pred             CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCC-CCcCHHHHHHH
Confidence            5543111                                           011111222222222221 23567899999


Q ss_pred             HHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         355 DQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       355 ~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      .+||++||++|||++|++.||||+....
T Consensus       280 ~~~L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         280 NKCLIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             HHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence            9999999999999999999999997654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.6e-35  Score=284.84  Aligned_cols=245  Identities=22%  Similarity=0.267  Sum_probs=196.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHH-HHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEIL-VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+++|.+....   ......+..|+. +++.++|+||+++++++...+..++||||+++++
T Consensus         3 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (321)
T cd05603           3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGE   82 (321)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCC
Confidence            689999999999888777778888765321   122344555654 5778999999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. ..+++..+..++.||+.||.|||+.+++||||||+||+++.++.++|+|||  ++.......          
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg--~~~~~~~~~----------  150 (321)
T cd05603          83 LFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFG--LCKEGVEPE----------  150 (321)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCC--CCccCCCCC----------
Confidence            9888765 468999999999999999999999999999999999999999999999999  332100000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (321)
T cd05603         151 --------------------------------------------------------------------------------  150 (321)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+||+.|+|||++.+..+...+|.|++|+++|||++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~-------  194 (321)
T cd05603         151 -----------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP-------  194 (321)
T ss_pred             -----------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCC-------
Confidence                                         00123468999999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~~~  379 (400)
                        ||.. .+.......+.... ..+  +...+..+.++|.+||+.||++|+++    .++++||||..
T Consensus       195 --pf~~-~~~~~~~~~i~~~~-~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         195 --PFYS-RDVSQMYDNILHKP-LQL--PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             --CCCC-CCHHHHHHHHhcCC-CCC--CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence              8876 45555555555442 222  23467789999999999999999976    49999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4645|consensus

Probab=100.00  E-value=8.9e-37  Score=317.47  Aligned_cols=258  Identities=26%  Similarity=0.409  Sum_probs=221.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||.|.|++|+.+-+..++.-.|+|.+......  ....+.+|..++..++|+|+|++|++=..+..+++.||||++|+|.
T Consensus      1243 Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa 1322 (1509)
T KOG4645|consen 1243 IGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLA 1322 (1509)
T ss_pred             cCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHH
Confidence            68999999999999999999999998876443  2345779999999999999999999999889999999999999999


Q ss_pred             HHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~~~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++..++ .++.-.+.+..|++.|+.|||++|||||||||.||+++.+|.+|.+|||  .|.+........         
T Consensus      1323 ~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFG--sa~ki~~~~~~~--------- 1391 (1509)
T KOG4645|consen 1323 SLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFG--SAVKIKNNAQTM--------- 1391 (1509)
T ss_pred             HHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeeccc--ceeEecCchhcC---------
Confidence            9999874 5666778889999999999999999999999999999999999999999  554332221111         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus      1392 -------------------------------------------------------------------------------- 1391 (1509)
T KOG4645|consen 1392 -------------------------------------------------------------------------------- 1391 (1509)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC---CCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN---KNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                +...+...||+.|||||++.+..   .....|+||+|||+.||++|.-      
T Consensus      1392 --------------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkr------ 1439 (1509)
T KOG4645|consen 1392 --------------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKR------ 1439 (1509)
T ss_pred             --------------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCC------
Confidence                                      01134568999999999999865   2367899999999999999977      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  386 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l  386 (400)
                         |+..-++...+++++--+..|.++.  ++|...+|||.+||+.||.+|+++.|+|.|.|-+..+..-++
T Consensus      1440 ---PW~~~dne~aIMy~V~~gh~Pq~P~--~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~~s~ 1506 (1509)
T KOG4645|consen 1440 ---PWAELDNEWAIMYHVAAGHKPQIPE--RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDEDSS 1506 (1509)
T ss_pred             ---chhhccchhHHHhHHhccCCCCCch--hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccccchh
Confidence               9988889999999999998888854  599999999999999999999999999999999976655443

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.1e-35  Score=284.67  Aligned_cols=245  Identities=20%  Similarity=0.294  Sum_probs=197.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHH-HHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEIL-VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+....   ......+..|.. +++.++|+||+++++++..++..+++|||+++++
T Consensus         3 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~   82 (325)
T cd05602           3 IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGE   82 (325)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCc
Confidence            699999999999887777777787765321   112233444544 5677899999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+.+.. +.+.+..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||  ++.......          
T Consensus        83 L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG--~a~~~~~~~----------  150 (325)
T cd05602          83 LFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG--LCKENIEHN----------  150 (325)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCC--CCcccccCC----------
Confidence            9998875 468899999999999999999999999999999999999999999999999  333110000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (325)
T cd05602         151 --------------------------------------------------------------------------------  150 (325)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+||+.|+|||++.+..+...+|.||+|+++|+|++|..       
T Consensus       151 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~-------  194 (325)
T cd05602         151 -----------------------------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP-------  194 (325)
T ss_pred             -----------------------------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCC-------
Confidence                                         01223468999999999999888889999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH----HHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS----LLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~----~~l~hp~~~~  379 (400)
                        ||.. .+..+....+...... +  +.+++..+.++|++||+.||.+|+++.    ++++|+||..
T Consensus       195 --pf~~-~~~~~~~~~i~~~~~~-~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         195 --PFYS-RNTAEMYDNILNKPLQ-L--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             --CCCC-CCHHHHHHHHHhCCcC-C--CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence              8876 5555655666554322 2  234788999999999999999999876    8999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.2e-35  Score=291.57  Aligned_cols=250  Identities=20%  Similarity=0.251  Sum_probs=193.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+......||+|.+...  .....+++.+|+.+++.++|+||+++++++....     ..++++||+.
T Consensus         8 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~   87 (372)
T cd07853           8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ   87 (372)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc
Confidence            68999999999998888888999987543  2223467889999999999999999999998766     7899999995


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       ++|.+.+.. ..+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+........      
T Consensus        88 -~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg--~a~~~~~~~~------  158 (372)
T cd07853          88 -SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFG--LARVEEPDES------  158 (372)
T ss_pred             -cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEecccc--ceeecccCcc------
Confidence             578777754 478999999999999999999999999999999999999999999999999  3331100000      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (372)
T cd07853         159 --------------------------------------------------------------------------------  158 (372)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                      .......+|+.|+|||++.+.. +...+|.||+|+++|||++|..   
T Consensus       159 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~---  203 (372)
T cd07853         159 --------------------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRI---  203 (372)
T ss_pred             --------------------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCC---
Confidence                                            0011235788899999988754 5578999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHh-----------------------C--CCCCcc----hhhhhcHHHHHHHHHhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIAT-----------------------N--KKPEIK----EKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~-----------------------~--~~~~~~----~~~~~s~~~~dli~~~L~~dP  362 (400)
                            ||.. .++...+..+..                       .  .++...    .....+..+.+||.+||+.||
T Consensus       204 ------pf~~-~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP  276 (372)
T cd07853         204 ------LFQA-QSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP  276 (372)
T ss_pred             ------CCCC-CCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence                  7654 333333332221                       1  011110    012246789999999999999


Q ss_pred             hhhhcHHHHhcCccccccC
Q psy9736         363 ETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~  381 (400)
                      ++|||+.++|+||||+..+
T Consensus       277 ~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         277 DKRISAADALAHPYLDEGR  295 (372)
T ss_pred             hhCcCHHHHhcCHhhCCCc
Confidence            9999999999999998743

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.6e-35  Score=283.68  Aligned_cols=245  Identities=17%  Similarity=0.225  Sum_probs=200.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+|+|.+....   ....+.+..|..++..+ +|++|+++++++...+..++||||+++++
T Consensus         8 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~   87 (323)
T cd05616           8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD   87 (323)
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCC
Confidence            689999999999877777777777765321   22334567788888877 68999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |...+.. +.+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.....    .       
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG--~~~~~~~----~-------  154 (323)
T cd05616          88 LMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFG--MCKENMW----D-------  154 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCC--CceecCC----C-------
Confidence            9988865 478999999999999999999999999999999999999999999999999  3321000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (323)
T cd05616         155 --------------------------------------------------------------------------------  154 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       155 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~-------  199 (323)
T cd05616         155 ----------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA-------  199 (323)
T ss_pred             ----------------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCC-------
Confidence                                        000223478999999999999888899999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~  379 (400)
                        ||.. .+.......+...... +  +..++..+.+|+.+||+.||++|+++     .++++||||+.
T Consensus       200 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         200 --PFEG-EDEDELFQSIMEHNVA-Y--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             --CCCC-CCHHHHHHHHHhCCCC-C--CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence              8876 5566666666655332 2  33578899999999999999999984     89999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.5e-35  Score=286.02  Aligned_cols=246  Identities=20%  Similarity=0.290  Sum_probs=191.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||.|+|+.|+++.+......||+|.+.....  ...+.+.+|+.++++++|+||+++++++...      ...+++++++
T Consensus        23 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~  102 (343)
T cd07878          23 VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM  102 (343)
T ss_pred             cccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC
Confidence            6899999999999888888899998764321  2345678999999999999999999988643      3578999998


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+++..+.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.....    .    
T Consensus       103 -~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg--~~~~~~~----~----  171 (343)
T cd07878         103 -GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG--LARQADD----E----  171 (343)
T ss_pred             -CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCc--cceecCC----C----
Confidence             7799988887789999999999999999999999999999999999999999999999999  3331100    0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (343)
T cd07878         172 --------------------------------------------------------------------------------  171 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....||+.|+|||++.+ ..+...+|.||+|+++|+|++|..   
T Consensus       172 ----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~---  214 (343)
T cd07878         172 ----------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA---  214 (343)
T ss_pred             ----------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCC---
Confidence                                              112357889999999877 445678999999999999999976   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCC---C-------------------CCcch------hhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNK---K-------------------PEIKE------KEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~---~-------------------~~~~~------~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+..+.+..+....   .                   +..+.      ....++.+.+||.+||+.||+
T Consensus       215 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~  287 (343)
T cd07878         215 ------LFPG-NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSD  287 (343)
T ss_pred             ------CCCC-CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChh
Confidence                  6654 23322222222110   0                   00000      012355688999999999999


Q ss_pred             hhhcHHHHhcCccccccC
Q psy9736         364 TRASASLLLKHPFLKIAR  381 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~  381 (400)
                      +|||+.++|+||||....
T Consensus       288 ~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         288 KRISASEALAHPYFSQYH  305 (343)
T ss_pred             hCCCHHHHhcCcchhccC
Confidence            999999999999998643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-35  Score=278.43  Aligned_cols=246  Identities=20%  Similarity=0.265  Sum_probs=197.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.|+++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++.+..+...+++|||+++++|
T Consensus         8 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   87 (285)
T cd05605           8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL   87 (285)
T ss_pred             EecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcH
Confidence            689999999999888778888888875332   11234577899999999999999999999988999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.+..   ..+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+...    ...      
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg--~~~~~----~~~------  155 (285)
T cd05605          88 KFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLG--LAVEI----PEG------  155 (285)
T ss_pred             HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCC--Cceec----CCC------
Confidence            887753   358999999999999999999999999999999999999999999999999  33211    000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (285)
T cd05605         156 --------------------------------------------------------------------------------  155 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......|++.|+|||++.+..++..+|.|++|+++|||++|..      
T Consensus       156 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~------  199 (285)
T cd05605         156 ------------------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKS------  199 (285)
T ss_pred             ------------------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCC------
Confidence                                          00112368889999999988888888999999999999999987      


Q ss_pred             cccCcchhhcH--HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         315 FLIPYLFILSC--RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~--~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                         ||......  .+.....+.......  +..++..+.+||.+||..||++||     +++++++||||..
T Consensus       200 ---pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         200 ---PFRQRKEKVKREEVERRVKEDQEEY--SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             ---CCCCCchhhHHHHHHHHhhhccccc--CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence               88663221  112222222222222  334788899999999999999999     9999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.7e-35  Score=280.74  Aligned_cols=131  Identities=24%  Similarity=0.427  Sum_probs=110.0

Q ss_pred             CCcceEEEEEecCC--CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDD--RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~--~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++..  ......+++|.+....  ....+.+|+.++++++|+||+++++++..  +..+|+++||+. ++
T Consensus         9 lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~   85 (317)
T cd07868           9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HD   85 (317)
T ss_pred             cccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CC
Confidence            69999999999974  3456778888875332  23457899999999999999999998854  457899999995 58


Q ss_pred             hHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe----cCCCceEEeccc
Q psy9736          77 LTDVVTE----------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL----GLDGSVKLSKWN  134 (400)
Q Consensus        77 L~~~i~~----------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~----~~~~~~~l~dfg  134 (400)
                      |.+++..          ..+++..++.++.|++.||.|||+.+|+||||||+||++    +..+.++|+|||
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            8877642          148899999999999999999999999999999999999    456789999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=5.2e-35  Score=273.23  Aligned_cols=245  Identities=32%  Similarity=0.496  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.++.+.+......+++|.+........+.+.+|+.+++.++|+||+++++++..++..++++||+++++|.++
T Consensus        17 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (267)
T cd06645          17 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDI   96 (267)
T ss_pred             hCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHH
Confidence            68999999999988777888899987655544556688999999999999999999999999999999999999999998


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      +.. +.+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.......              
T Consensus        97 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg--~~~~~~~~~--------------  160 (267)
T cd06645          97 YHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFG--VSAQITATI--------------  160 (267)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcce--eeeEccCcc--------------
Confidence            864 478999999999999999999999999999999999999999999999999  333111000              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (267)
T cd06645         161 --------------------------------------------------------------------------------  160 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                               .......|++.|+|||++.   ...+...+|.||+|+++|+|++|..        
T Consensus       161 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~--------  207 (267)
T cd06645         161 -------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQP--------  207 (267)
T ss_pred             -------------------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCC--------
Confidence                                     0012235788899999875   3345578999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         317 IPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                       ||.. ..+..........  .++.......++..+.+||++||..||++|||++++++|||
T Consensus       208 -p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         208 -PMFD-LHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             -Cccc-ccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence             7766 3333333333322  12223333357788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.6e-35  Score=276.21  Aligned_cols=263  Identities=32%  Similarity=0.482  Sum_probs=217.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.+|.+.+......|++|.+.... ....+.+.+|+.+++++.|+||+++++.+..+...++|+||+++++|.+
T Consensus        12 lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   91 (277)
T cd06640          12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALD   91 (277)
T ss_pred             cccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHH
Confidence            689999999999988888889999876443 2345678899999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++..+.+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.++.++++|||  .+.......              
T Consensus        92 ~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg--~~~~~~~~~--------------  155 (277)
T cd06640          92 LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFG--VAGQLTDTQ--------------  155 (277)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccc--cceeccCCc--------------
Confidence            9988889999999999999999999999999999999999999999999999999  333110000              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (277)
T cd06640         156 --------------------------------------------------------------------------------  155 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                               ...+...++..|+|||++.+......+|.|++|+++|||++|..         ||
T Consensus       156 -------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~---------p~  201 (277)
T cd06640         156 -------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP---------PN  201 (277)
T ss_pred             -------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCC---------CC
Confidence                                     00112246778999999888777788999999999999999986         77


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC-CCCcchhhhhhHHH
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP-LASLTPLIMAAKEA  396 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~-~~~l~~~~~~~~~~  396 (400)
                      .. .++......+..+.++.+.  ..++..+.+++.+||+.+|++||++.++++||||..... .+.|.+++.+-+++
T Consensus       202 ~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd06640         202 SD-MHPMRVLFLIPKNNPPTLT--GEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSYLTELIDRFKRW  276 (277)
T ss_pred             CC-cChHhHhhhhhcCCCCCCc--hhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchhhhHHHHHHHHHHhc
Confidence            66 5556656555555555443  346778999999999999999999999999999998666 66677777766554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.7e-35  Score=276.41  Aligned_cols=247  Identities=16%  Similarity=0.204  Sum_probs=195.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.|+++........+++|.+....   ......+..|++++++++|+||+++++++..+...+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            699999999999888778888888775321   11234456799999999999999999999999999999999999999


Q ss_pred             HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ...+...   .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.......         
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg--~~~~~~~~~---------  149 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLG--LAVELKDGK---------  149 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeece--eeeecCCCc---------
Confidence            8877532   58889999999999999999999999999999999999999999999999  332110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (277)
T cd05607         150 --------------------------------------------------------------------------------  149 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ......|++.|+|||++....+...+|.||+|+++|||++|..      
T Consensus       150 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~------  192 (277)
T cd05607         150 -------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRT------  192 (277)
T ss_pred             -------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCC------
Confidence                                           0112257889999999988888888999999999999999987      


Q ss_pred             cccCcchhhc---HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCcccccc
Q psy9736         315 FLIPYLFILS---CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~---~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~~~~  380 (400)
                         ||.....   .......+.....+. . ...++..+.+||.+||+.||++||++    ++++.||||+..
T Consensus       193 ---p~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         193 ---PFKDHKEKVAKEELKRRTLEDEVKF-E-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             ---CCCCCcchhhHHHHHHHhhcccccc-c-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence               8765222   223333333322211 1 23478899999999999999999999    678899999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.5e-35  Score=286.14  Aligned_cols=245  Identities=17%  Similarity=0.252  Sum_probs=189.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||.|+|+.|+++.+...+..||+|.+...  .....+.+.+|+.+++.++|+||+++++++....      ..|++|||+
T Consensus        29 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~  108 (359)
T cd07876          29 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELM  108 (359)
T ss_pred             eecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCC
Confidence            68999999999998888888999987543  2234566889999999999999999999886543      579999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++ ++.+.+.. .+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.....    .    
T Consensus       109 ~~-~l~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg--~a~~~~~----~----  176 (359)
T cd07876         109 DA-NLCQVIHM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTACT----N----  176 (359)
T ss_pred             Cc-CHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCC--Ccccccc----C----
Confidence            65 66666543 47889999999999999999999999999999999999999999999999  3321000    0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (359)
T cd07876         177 --------------------------------------------------------------------------------  176 (359)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.||+|+++|+|++|..    
T Consensus       177 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~----  220 (359)
T cd07876         177 --------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV----  220 (359)
T ss_pred             --------------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCC----
Confidence                                            00122367889999999999888889999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhC---------------------CCCCcc------------------hhhhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATN---------------------KKPEIK------------------EKEKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~---------------------~~~~~~------------------~~~~~s~~~~dl  353 (400)
                           ||... +.......+...                     ..+..+                  .....+..+.+|
T Consensus       221 -----pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  294 (359)
T cd07876         221 -----IFQGT-DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDL  294 (359)
T ss_pred             -----CCCCC-CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHH
Confidence                 77652 222211111110                     000000                  001134678999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |.+||..||++|||+.|+|+||||+.
T Consensus       295 i~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         295 LSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHhccCcccCCCHHHHhcCchhhh
Confidence            99999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=4.6e-35  Score=282.44  Aligned_cols=254  Identities=26%  Similarity=0.362  Sum_probs=194.2

Q ss_pred             CCcc--eEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRG--VTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G--~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|  .|++|+++.+..++..||+|.+.....  ...+.+.+|+.+++.++|+||+++++++..++..++|+||+++++
T Consensus         6 ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~   85 (327)
T cd08227           6 IGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS   85 (327)
T ss_pred             ccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCc
Confidence            5788  789999999999999999999875432  234567789999999999999999999999999999999999999


Q ss_pred             hHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccc-cchhhccc
Q psy9736          77 LTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE-ISKVIIYC  152 (400)
Q Consensus        77 L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~  152 (400)
                      |.+++..   ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++++||+  ........ ....    
T Consensus        86 l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~--~~~~~~~~~~~~~----  159 (327)
T cd08227          86 AKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR--SNLSMINHGQRLR----  159 (327)
T ss_pred             HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccc--hhhcccccccccc----
Confidence            9998864   258999999999999999999999999999999999999999999999998  22211000 0000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                         .                 ..         
T Consensus       160 ---------------------------------------------------~-----------------~~---------  162 (327)
T cd08227         160 ---------------------------------------------------V-----------------VH---------  162 (327)
T ss_pred             ---------------------------------------------------c-----------------cc---------
Confidence                                                               0                 00         


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                      .......++..|+|||++..  ..++..+|.||+|+++|||++|..  
T Consensus       163 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~--  208 (327)
T cd08227         163 --------------------------------DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV--  208 (327)
T ss_pred             --------------------------------cccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCC--
Confidence                                            00011246678999999876  346688999999999999999976  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCc-------------------------------------------chhhhhc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEI-------------------------------------------KEKEKLS  347 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-------------------------------------------~~~~~~s  347 (400)
                             ||... ...........+..+..                                           +....++
T Consensus       209 -------pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (327)
T cd08227         209 -------PFKDM-PATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFS  280 (327)
T ss_pred             -------CCCCc-chhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccC
Confidence                   77552 22222222221111100                                           0012356


Q ss_pred             HHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         348 QIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       348 ~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      +.+.+||++||+.||++|||++++++||||+.
T Consensus       281 ~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         281 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             HHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            78999999999999999999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0666|consensus

Probab=100.00  E-value=9.7e-36  Score=269.20  Aligned_cols=195  Identities=22%  Similarity=0.358  Sum_probs=166.0

Q ss_pred             CCcceEEEEEecCCCcee----EEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFF----SKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~----~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||++......    ..+|+|+++....  +-.....+|+.+++.++|+|++.+..+|.+ +..+|+++||++
T Consensus        32 Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE  111 (438)
T KOG0666|consen   32 IGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE  111 (438)
T ss_pred             ecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh
Confidence            689999999999444333    3579999875532  334667899999999999999999999987 789999999997


Q ss_pred             CCChHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC----CceEEeccchhhhhhhcc
Q psy9736          74 GGSLTDVVTET------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD----GSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        74 ~~~L~~~i~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~----~~~~l~dfg~~~~~~~~~  143 (400)
                      . +|.+.|+-.      .++...++.++.||+.|+.|||+..|+|||+||.||++-.+    |++||+|||  +++.+  
T Consensus       112 h-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG--laR~~--  186 (438)
T KOG0666|consen  112 H-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG--LARLF--  186 (438)
T ss_pred             h-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc--HHHHh--
Confidence            6 999988632      48899999999999999999999999999999999999777    999999999  66633  


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                        .+..-+.+....+..|..|+|||++.|..                          .|....|+|.+||++.|+|+-.+
T Consensus       187 --~~plkpl~s~d~VVVTiWYRAPELLLGa~--------------------------hYT~AiDvWAiGCIfaElLtl~P  238 (438)
T KOG0666|consen  187 --NNPLKPLASLDPVVVTIWYRAPELLLGAR--------------------------HYTKAIDVWAIGCIFAELLTLEP  238 (438)
T ss_pred             --hccccccccCCceEEEEEecChHHhcccc--------------------------cccchhhhHHHHHHHHHHHccCc
Confidence              33333445567788999999999999988                          89999999999999999999999


Q ss_pred             ccccC
Q psy9736         224 LWYTK  228 (400)
Q Consensus       224 ~~~~~  228 (400)
                      .|.+.
T Consensus       239 lF~g~  243 (438)
T KOG0666|consen  239 LFKGR  243 (438)
T ss_pred             cccch
Confidence            99873

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=4.3e-35  Score=282.29  Aligned_cols=246  Identities=17%  Similarity=0.228  Sum_probs=200.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+......||+|.+...   .....+.+..|+.+++.+. |++|+++++++..++.+|+||||+++++
T Consensus         8 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~   87 (323)
T cd05615           8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD   87 (323)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCc
Confidence            68999999999988777777888876532   1223456778999998875 5788889999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+.+.. +.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.......          
T Consensus        88 L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg--~~~~~~~~~----------  155 (323)
T cd05615          88 LMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFG--MCKEHMVDG----------  155 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccc--cccccCCCC----------
Confidence            9998875 479999999999999999999999999999999999999999999999999  332100000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (323)
T cd05615         156 --------------------------------------------------------------------------------  155 (323)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   .......||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       156 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~-------  199 (323)
T cd05615         156 -----------------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP-------  199 (323)
T ss_pred             -----------------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCC-------
Confidence                                         00123468999999999998888889999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+...... +  +..++..+.+|+.+||+.||++|++     .+++++||||+..
T Consensus       200 --pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         200 --PFDG-EDEDELFQSIMEHNVS-Y--PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             --CCCC-CCHHHHHHHHHhCCCC-C--CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence              8876 5566666666655332 2  3347889999999999999999998     5789999999964

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-35  Score=283.18  Aligned_cols=250  Identities=18%  Similarity=0.226  Sum_probs=196.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.|+.+.+......||+|.+...   .....+.+.+|+.+++.++|+||+++++++..++.+|+||||+++++|
T Consensus         9 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L   88 (331)
T cd05597           9 IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDL   88 (331)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcH
Confidence            68999999999988777778888887532   222345688999999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+........         
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg--~~~~~~~~~~---------  157 (331)
T cd05597          89 LTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFG--SCLRLLADGT---------  157 (331)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECC--ceeecCCCCC---------
Confidence            999875  368999999999999999999999999999999999999999999999999  3321110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (331)
T cd05597         158 --------------------------------------------------------------------------------  157 (331)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                   .......||+.|+|||++..     ..+...+|.|++|+++|+|++|..  
T Consensus       158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~--  206 (331)
T cd05597         158 -----------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGET--  206 (331)
T ss_pred             -----------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCC--
Confidence                                         00112368889999999873     334567899999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCC-CCc-chhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKK-PEI-KEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~-~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                             ||.. .+..+....+..... ..+ .....++..+.+||++||..++++  |++++++++||||...
T Consensus       207 -------Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         207 -------PFYA-ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             -------CCCC-CCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence                   8876 555555555554321 111 122347889999999998765443  8899999999999763

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.7e-35  Score=280.65  Aligned_cols=248  Identities=22%  Similarity=0.306  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.||++.+......||+|.+..... .....+.+|+.++++++|+||+++++++..++..+++|||+++ +|.+
T Consensus        14 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~   92 (309)
T cd07872          14 LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQ   92 (309)
T ss_pred             ecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHH
Confidence            6899999999998888888899998764432 2335678899999999999999999999999999999999965 8877


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+...  .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+........           
T Consensus        93 ~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg--~~~~~~~~~~-----------  159 (309)
T cd07872          93 YMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFG--LARAKSVPTK-----------  159 (309)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccc--cceecCCCcc-----------
Confidence            77543  47899999999999999999999999999999999999999999999999  3331100000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (309)
T cd07872         160 --------------------------------------------------------------------------------  159 (309)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+|+.|+|||++.+ ..+...+|.|++|+++|+|++|..        
T Consensus       160 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~--------  203 (309)
T cd07872         160 ----------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRP--------  203 (309)
T ss_pred             ----------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                        0112256788999998865 345578999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCC---------------------CC------cchhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         317 IPYLFILSCRQALYLIATNKK---------------------PE------IKEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~---------------------~~------~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                       ||.. .+..+.+..+.+...                     +.      ......++..+.+||++||+.||.+|||++
T Consensus       204 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~  281 (309)
T cd07872         204 -LFPG-STVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAE  281 (309)
T ss_pred             -CCCC-CChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHH
Confidence             6655 333333222221100                     00      001123677899999999999999999999


Q ss_pred             HHhcCcccccc
Q psy9736         370 LLLKHPFLKIA  380 (400)
Q Consensus       370 ~~l~hp~~~~~  380 (400)
                      |+|+||||+..
T Consensus       282 e~l~h~~~~~~  292 (309)
T cd07872         282 EAMKHAYFRSL  292 (309)
T ss_pred             HHhcChhhhhc
Confidence            99999999973

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4.6e-35  Score=277.03  Aligned_cols=244  Identities=23%  Similarity=0.288  Sum_probs=187.3

Q ss_pred             CCcceEEEEEecCCCce-eEEEEeccccccC--cchHHHHHHHHHHHHhC---CCCCcccccceeEe-----CCEEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRF-FSKILSNPITLAQ--QPKKELIINEILVMREN---KHPNIVNYLDSYLV-----GEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~-----~~~~~lv~   69 (400)
                      ||.|+|+.||++.+... ...||+|.+....  ......+.+|+.+++.+   .|+||+++++++..     ....++++
T Consensus         9 lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~   88 (290)
T cd07862           9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF   88 (290)
T ss_pred             eccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEE
Confidence            68999999999977443 4667888765432  22234566788887776   69999999998752     34689999


Q ss_pred             eccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          70 EYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        70 e~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ||+. ++|.+++..   ..+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+......  
T Consensus        89 e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~--  163 (290)
T cd07862          89 EHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQ--  163 (290)
T ss_pred             ccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEcccc--ceEeccCC--
Confidence            9995 588888864   358999999999999999999999999999999999999999999999999  33311000  


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (290)
T cd07862         164 --------------------------------------------------------------------------------  163 (290)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                            .......||+.|+|||++.+..+...+|.||+|+++|||++|
T Consensus       164 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  205 (290)
T cd07862         164 --------------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  205 (290)
T ss_pred             --------------------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence                                                  001233688999999999888888899999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCC-----------------------cc-hhhhhcHHHHHHHHHhhhhhh
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPE-----------------------IK-EKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~-----------------------~~-~~~~~s~~~~dli~~~L~~dP  362 (400)
                      ..         ||.. .+..+.+..+.......                       +. -..+++..+.+||.+||+.||
T Consensus       206 ~~---------~f~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  275 (290)
T cd07862         206 KP---------LFRG-SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  275 (290)
T ss_pred             CC---------CcCC-CCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCc
Confidence            75         6655 44555555554321100                       00 002356788999999999999


Q ss_pred             hhhhcHHHHhcCccc
Q psy9736         363 ETRASASLLLKHPFL  377 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~  377 (400)
                      ++|||+.++|+||||
T Consensus       276 ~~R~s~~~~l~hp~f  290 (290)
T cd07862         276 AKRISAYSALSHPYF  290 (290)
T ss_pred             hhcCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.9e-35  Score=281.90  Aligned_cols=250  Identities=18%  Similarity=0.229  Sum_probs=198.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++........+++|.+...   .....+.+.+|+.++..++|+||+++++.+..+...++||||+++++|
T Consensus         9 lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L   88 (332)
T cd05623           9 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDL   88 (332)
T ss_pred             EEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcH
Confidence            68999999999887777777777776422   122334578899999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++.+  ..+++..++.++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  .+........         
T Consensus        89 ~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG--~a~~~~~~~~---------  157 (332)
T cd05623          89 LTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGT---------  157 (332)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecc--hheecccCCc---------
Confidence            999975  468999999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (332)
T cd05623         158 --------------------------------------------------------------------------------  157 (332)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                   ......+||+.|+|||++..     ..+...+|.||+|+++|||++|..  
T Consensus       158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~--  206 (332)
T cd05623         158 -----------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGET--  206 (332)
T ss_pred             -----------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCC--
Confidence                                         00123468999999998862     345578999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCC-CCc-chhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKK-PEI-KEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~-~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                             ||.. .+..+....+..... ..+ .....++..+.+||++||..++++  |++++++++||||...
T Consensus       207 -------Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         207 -------PFYA-ESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             -------CCCC-CCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence                   8877 566666666665432 111 112357889999999999765544  6899999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=9.1e-35  Score=273.45  Aligned_cols=263  Identities=32%  Similarity=0.472  Sum_probs=217.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.||++.+......|++|...... ....+.+.+|+.++++++|+||+++++++..+...++|+||+++++|.+
T Consensus        12 ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~   91 (277)
T cd06641          12 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD   91 (277)
T ss_pred             EeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHH
Confidence            588999999999887778889998875443 2234668899999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++..+.+++..+..++.+++.++.|||+.+++|+||+|+||+++.++.++++|||  .+........             
T Consensus        92 ~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg--~~~~~~~~~~-------------  156 (277)
T cd06641          92 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG--VAGQLTDTQI-------------  156 (277)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecc--cceecccchh-------------
Confidence            9988789999999999999999999999999999999999999999999999999  3331110000             


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (277)
T cd06641         157 --------------------------------------------------------------------------------  156 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                                ..+...|+..|+|||.+........+|.|++|+++|+|++|..         ||
T Consensus       157 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~---------p~  201 (277)
T cd06641         157 --------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP---------PH  201 (277)
T ss_pred             --------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCC---------CC
Confidence                                      0112256778999999887766678999999999999999976         77


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC-CCCcchhhhhhHHH
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP-LASLTPLIMAAKEA  396 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~-~~~l~~~~~~~~~~  396 (400)
                      .. .+.......+..+..+.+.  ..++..+.+++.+||+.+|++||++.++++||||..+.. ...+..||..+|++
T Consensus       202 ~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd06641         202 SE-LHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKTSYLTELIDRYKRW  276 (277)
T ss_pred             Cc-cchHHHHHHHhcCCCCCCC--cccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhccchHHHHHHHhhcc
Confidence            65 5555666666555544443  346788999999999999999999999999999998555 67888899988864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.7e-35  Score=294.12  Aligned_cols=245  Identities=20%  Similarity=0.212  Sum_probs=187.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC--------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG--------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+......||+|.+....    ....+|+.+++.++|+||++++++|...        ..++++|||+
T Consensus        74 LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~  149 (440)
T PTZ00036         74 IGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFI  149 (440)
T ss_pred             EEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecC
Confidence            589999999999888888889999874332    2245799999999999999998877532        2477999999


Q ss_pred             CCCChHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccc
Q psy9736          73 PGGSLTDVVT-----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        73 ~~~~L~~~i~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ++ ++.+++.     ...+++..++.++.|++.||.|||+.+|+||||||+||+++.++ .++|+|||  ++....... 
T Consensus       150 ~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG--la~~~~~~~-  225 (440)
T PTZ00036        150 PQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG--SAKNLLAGQ-  225 (440)
T ss_pred             Cc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc--cchhccCCC-
Confidence            65 7776664     23689999999999999999999999999999999999998765 69999999  443111000 


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       226 --------------------------------------------------------------------------------  225 (440)
T PTZ00036        226 --------------------------------------------------------------------------------  225 (440)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                             ......||+.|+|||++.+. .+...+|.||+||++|||++
T Consensus       226 ---------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt  266 (440)
T PTZ00036        226 ---------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMIL  266 (440)
T ss_pred             ---------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence                                                   01223678899999988764 56688999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCC--C-----------------CCcc-------hhhhhcHHHHHHHHHhhh
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNK--K-----------------PEIK-------EKEKLSQIFQDFLDQCLE  359 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~--~-----------------~~~~-------~~~~~s~~~~dli~~~L~  359 (400)
                      |..         ||.. .+..+.+..+.+..  +                 +.+.       -+...+..+.+||.+||+
T Consensus       267 G~~---------pf~~-~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~  336 (440)
T PTZ00036        267 GYP---------IFSG-QSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK  336 (440)
T ss_pred             CCC---------CCCC-CChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC
Confidence            975         7765 44444444443210  0                 0000       012246789999999999


Q ss_pred             hhhhhhhcHHHHhcCccccccCC
Q psy9736         360 EEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       360 ~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +||.+|||+.|+|+||||+..+.
T Consensus       337 ~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        337 YEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             CChhHCcCHHHHhCChhHHhhhc
Confidence            99999999999999999987543

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=269.80  Aligned_cols=247  Identities=25%  Similarity=0.404  Sum_probs=199.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-----chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-----PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-----~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|.++.+|.+.+.....++++|.+.....     ...+.+.+|+.++++++|+||+++++++..+...++++||++++
T Consensus        10 lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   89 (263)
T cd06625          10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGG   89 (263)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCC
Confidence            6899999999998877778888887653321     12356889999999999999999999999999999999999999


Q ss_pred             ChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          76 SLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        76 ~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +|.+.+.. +.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........ .      
T Consensus        90 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg--~~~~~~~~~~-~------  160 (263)
T cd06625          90 SVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFG--ASKRLQTICS-S------  160 (263)
T ss_pred             cHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc--cceecccccc-c------
Confidence            99998875 468999999999999999999999999999999999999999999999999  3321100000 0      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (263)
T cd06625         161 --------------------------------------------------------------------------------  160 (263)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                   ........|++.|+|||++.+......+|.|++|+++||+++|..      
T Consensus       161 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~------  205 (263)
T cd06625         161 -----------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP------  205 (263)
T ss_pred             -----------------------------cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCC------
Confidence                                         000123357789999999999887789999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||.. .+.......+... ..+.+  +..++..+.+||++||..+|++|||+.++++||||
T Consensus       206 ---p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         206 ---PWAE-FEAMAAIFKIATQPTNPQL--PSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             ---Cccc-cchHHHHHHHhccCCCCCC--CccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence               8766 4444444444433 22222  34478899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.7e-34  Score=272.71  Aligned_cols=258  Identities=48%  Similarity=0.734  Sum_probs=216.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.+|.+........+++|.+..... ..+.+.+|+++++.++|+|++++++.+..+...++++||+++++|.++
T Consensus        27 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  105 (286)
T cd06614          27 IGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDI  105 (286)
T ss_pred             ccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHH
Confidence            5788899999988887778889998865544 567789999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..+..++.|++.|+.|||+.|++|+|++|+||+++.++.++|+|||  .+........            
T Consensus       106 l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~--~~~~~~~~~~------------  171 (286)
T cd06614         106 ITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFG--FAAQLTKEKS------------  171 (286)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccc--hhhhhccchh------------
Confidence            9876  79999999999999999999999999999999999999999999999999  3221110000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (286)
T cd06614         172 --------------------------------------------------------------------------------  171 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                 ......+++.|+|||.+.+..+...+|.|++|+++|+|++|..         |
T Consensus       172 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~---------p  215 (286)
T cd06614         172 ---------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP---------P  215 (286)
T ss_pred             ---------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCC---------C
Confidence                                       0112246778999999888877789999999999999999976         7


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhh
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI  390 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~  390 (400)
                      |.. .++......+.....+.......++..+.+||++||+.+|.+|||+.++++||||+.+-..+.+.||+
T Consensus       216 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~  286 (286)
T cd06614         216 YLR-EPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFAPLI  286 (286)
T ss_pred             CCC-CCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhhhcC
Confidence            766 55555555565555555555555888999999999999999999999999999999988888887764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=9.9e-35  Score=274.72  Aligned_cols=247  Identities=19%  Similarity=0.252  Sum_probs=198.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+.+.+..+...+++|.+.....   ...+.+.+|+.++++++|+|++++++.+..++..+++|||+++++|
T Consensus         8 ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L   87 (285)
T cd05630           8 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL   87 (285)
T ss_pred             eecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcH
Confidence            6899999999999988888889887754321   1234577899999999999999999999999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.+..   ..+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+...    ...      
T Consensus        88 ~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg--~~~~~----~~~------  155 (285)
T cd05630          88 KFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLG--LAVHV----PEG------  155 (285)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeecc--ceeec----CCC------
Confidence            988753   258999999999999999999999999999999999999999999999999  33210    000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (285)
T cd05630         156 --------------------------------------------------------------------------------  155 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..++..+|.|++|+++|+|++|..      
T Consensus       156 ------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~------  199 (285)
T cd05630         156 ------------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS------  199 (285)
T ss_pred             ------------------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCC------
Confidence                                          00112368899999999998888888999999999999999987      


Q ss_pred             cccCcchhhcH--HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         315 FLIPYLFILSC--RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~--~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                         ||......  .+....+........  +..+++.+.+|+++||+.||++|||     ++++++||||+..
T Consensus       200 ---Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         200 ---PFQQRKKKIKREEVERLVKEVQEEY--SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             ---CCCCCCccchHHHHHhhhhhhhhhc--CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence               88753221  222222222222221  3347788999999999999999999     9999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0669|consensus

Probab=100.00  E-value=3.1e-37  Score=271.70  Aligned_cols=296  Identities=18%  Similarity=0.273  Sum_probs=225.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHHHHHHHHHHHhCCCCCcccccceeEeC--------CEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVG--------EELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e   70 (400)
                      +|+|.|+.||+++.+..+.+|++|++..+.+.+  -....+|+.+|..++|+|++.+++.+...        ..+++|+.
T Consensus        25 igqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~  104 (376)
T KOG0669|consen   25 IGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFD  104 (376)
T ss_pred             cCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHH
Confidence            689999999999999999999999987654432  35568899999999999999998877542        35899999


Q ss_pred             ccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          71 YLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        71 ~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      +|+. +|..++++.  .++..+++.++.+++.||.|+|...|+|||+|+.|++++.+|.++|+|||  +++.++...+..
T Consensus       105 ~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFG--lar~fs~~~n~~  181 (376)
T KOG0669|consen  105 FCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFG--LARAFSTSKNVV  181 (376)
T ss_pred             Hhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccc--cccceecccccC
Confidence            9966 999998865  69999999999999999999999999999999999999999999999999  776666555443


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...   .+....|.+|+.||.+.|..                          .|....|+|-+||++.+++++.+.++++
T Consensus       182 kpr---ytnrvvTLwYrppEllLG~r--------------------------~yg~~iDiWgAgCimaeMwtrspimqgn  232 (376)
T KOG0669|consen  182 KPR---YTNRVVTLWYRPPELLLGDR--------------------------EYGPPIDIWGAGCIMAEMWTRSPIMQGN  232 (376)
T ss_pred             CCC---cccceeeeecCCHHHhhccc--------------------------ccCCcchhHhHHHHHHHHHccCccccCC
Confidence            222   56777899999999999988                          8999999999999999999999998774


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                      +...                              +..-.+..||+..   ||++-+...-+.          |+.+.   
T Consensus       233 teqq------------------------------ql~~Is~LcGs~t---kevWP~~d~lpL----------~~sie---  266 (376)
T KOG0669|consen  233 TEQQ------------------------------QLHLISQLCGSIT---KEVWPNVDNLPL----------YQSIE---  266 (376)
T ss_pred             hHHH------------------------------HHHHHHHHhccCC---cccCCCcccchH----------HHhcc---
Confidence            3221                              1112333455444   666654411110          00000   


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC-CCcc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL-ASLT  387 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~-~~l~  387 (400)
                              .|+.    +......+...-.|...+     +.+.||+++||.+||.+|+++.++|+|.||+..+.+ +.+.
T Consensus       267 --------~ePl----~~~~~rkv~n~~kp~~kd-----~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pqanl~  329 (376)
T KOG0669|consen  267 --------LEPL----PKGQKRKVKNRLKPYVKD-----DEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQANLQ  329 (376)
T ss_pred             --------CCCC----CcchhhhhhhhcccccCC-----hhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcchhhHH
Confidence                    0111    112222222222244433     368999999999999999999999999999987766 6666


Q ss_pred             hhhh
Q psy9736         388 PLIM  391 (400)
Q Consensus       388 ~~~~  391 (400)
                      ++++
T Consensus       330 ~ml~  333 (376)
T KOG0669|consen  330 DMLS  333 (376)
T ss_pred             HHHH
Confidence            6654

>KOG4279|consensus

Probab=100.00  E-value=4.7e-35  Score=287.62  Aligned_cols=248  Identities=26%  Similarity=0.432  Sum_probs=211.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|.|++||.++|..+..++|+|.+........+-+..||.+-++|+|+|||++++.+..++++-+.||-.+||+|..+
T Consensus       583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsL  662 (1226)
T KOG4279|consen  583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSL  662 (1226)
T ss_pred             eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHH
Confidence            69999999999999999999999999877766677788999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCC--CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhcccccc
Q psy9736          81 VTE--TCM--DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        81 i~~--~~l--~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++.  +++  .+.++-.+..||+.||.|||+..|||||||-+|++++.. |.+||+|||  ..        ++..     
T Consensus       663 LrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFG--Ts--------KRLA-----  727 (1226)
T KOG4279|consen  663 LRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFG--TS--------KRLA-----  727 (1226)
T ss_pred             HHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccc--cc--------hhhc-----
Confidence            975  566  889999999999999999999999999999999999865 999999999  22        1100     


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                       |..            
T Consensus       728 -----------------------------------------------------------------gin------------  730 (1226)
T KOG4279|consen  728 -----------------------------------------------------------------GIN------------  730 (1226)
T ss_pred             -----------------------------------------------------------------cCC------------
Confidence                                                                             000            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                   +-..++-||..|||||+|..-+  |+...|+||+||.+.||.+|.-     
T Consensus       731 -----------------------------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrP-----  776 (1226)
T KOG4279|consen  731 -----------------------------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRP-----  776 (1226)
T ss_pred             -----------------------------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCC-----
Confidence                                         1145678999999999998643  3367788888888888888864     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                          ||...-++...++++--. .-|++  |+.+|..++.||.+|+..||.+||+|.++|..||++..
T Consensus       777 ----PF~ElgspqAAMFkVGmyKvHP~i--Peelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  777 ----PFVELGSPQAAMFKVGMYKVHPPI--PEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             ----CeeecCChhHhhhhhcceecCCCC--cHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence                898877888888887333 22445  45589999999999999999999999999999999853

>KOG0587|consensus

Probab=100.00  E-value=1.2e-34  Score=292.18  Aligned_cols=258  Identities=29%  Similarity=0.466  Sum_probs=218.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEe-----CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLV-----GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~-----~~~~~lv~e~~~~   74 (400)
                      +|.|++++|+++++..++..+|+|....... ..+.+..|.++|+.. .|+|++.+|++|..     ++.+|||||||.+
T Consensus        27 ig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~g  105 (953)
T KOG0587|consen   27 IGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGG  105 (953)
T ss_pred             EeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCC
Confidence            5899999999999999999999999877665 446678899999987 79999999999875     4689999999999


Q ss_pred             CChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          75 GSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        75 ~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      |++.++++.   +.+.|+.+.-|++.++.|+.|||...++|||+|-.||++..++.+|+.|||  +..    +.+     
T Consensus       106 GSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFG--vSa----Qld-----  174 (953)
T KOG0587|consen  106 GSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFG--VSA----QLD-----  174 (953)
T ss_pred             ccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeee--eee----eee-----
Confidence            999999985   368999999999999999999999999999999999999999999999999  222    111     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (953)
T KOG0587|consen  175 --------------------------------------------------------------------------------  174 (953)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-----CCcccCCCCccchhhhhcCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-----KNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                    .....+++..|||.|||||++....     |..-.|.||+|++..||-.|
T Consensus       175 ------------------------------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG  224 (953)
T KOG0587|consen  175 ------------------------------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEG  224 (953)
T ss_pred             ------------------------------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCC
Confidence                                          1122378899999999999998532     22345667777776777666


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCc
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  386 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l  386 (400)
                      +          |...++++++.++.|.++.+|.+..+.+|+..+-|||..||.+|-++||+..++|+|||+++..    +
T Consensus       225 ~----------PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~----~  290 (953)
T KOG0587|consen  225 A----------PPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP----N  290 (953)
T ss_pred             C----------CCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc----c
Confidence            6          4444599999999999999999999999999999999999999999999999999999999544    5


Q ss_pred             chhhhhhH
Q psy9736         387 TPLIMAAK  394 (400)
Q Consensus       387 ~~~~~~~~  394 (400)
                      .+-|+...
T Consensus       291 e~qir~~i  298 (953)
T KOG0587|consen  291 ERQVRIQI  298 (953)
T ss_pred             HHHHHHHH
Confidence            55555443

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=286.81  Aligned_cols=248  Identities=21%  Similarity=0.223  Sum_probs=191.6

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||.|+++.||++.  +.....+|++|.+...     +...+|+.++++++|+||+++++++..+...+++||++. ++|.
T Consensus       100 Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~  173 (392)
T PHA03207        100 LTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLF  173 (392)
T ss_pred             ecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHH
Confidence            6899999999874  4456678999987533     234689999999999999999999999999999999994 5888


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++.. ..+++..++.++.|++.||.|||+.+|+||||||+||+++..+.++|+|||  ++.........          
T Consensus       174 ~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG--~a~~~~~~~~~----------  241 (392)
T PHA03207        174 TYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFG--AACKLDAHPDT----------  241 (392)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCc--cccccCccccc----------
Confidence            88854 478999999999999999999999999999999999999999999999999  44311110000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       242 --------------------------------------------------------------------------------  241 (392)
T PHA03207        242 --------------------------------------------------------------------------------  241 (392)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                 .......||+.|+|||++....+...+|+|++|+++|||++|..         
T Consensus       242 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~---------  285 (392)
T PHA03207        242 ---------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV---------  285 (392)
T ss_pred             ---------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCC---------
Confidence                                       00123468999999999998888889999999999999999987         


Q ss_pred             Ccchhh--cHHHHHHHHHhC--------------------------CCCCcc-----hhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         318 PYLFIL--SCRQALYLIATN--------------------------KKPEIK-----EKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       318 P~~~~~--~~~~~~~~i~~~--------------------------~~~~~~-----~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                      ||....  .....+..+.+.                          ..+...     ....++..+.+||++||+.||++
T Consensus       286 pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~  365 (392)
T PHA03207        286 TLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEF  365 (392)
T ss_pred             CCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhh
Confidence            665421  111222222110                          001000     11234667899999999999999


Q ss_pred             hhcHHHHhcCccccccCC
Q psy9736         365 RASASLLLKHPFLKIARP  382 (400)
Q Consensus       365 R~s~~~~l~hp~~~~~~~  382 (400)
                      |||++++|+||||+..+.
T Consensus       366 Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        366 RPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             CCCHHHHhhCchhhccch
Confidence            999999999999987443

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2e-34  Score=267.03  Aligned_cols=244  Identities=25%  Similarity=0.327  Sum_probs=204.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|.++.+|++........+++|.+...  .....+.+.+|+.++++++|+||+++++++..++..++++||+++++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (256)
T cd08529           8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLH   87 (256)
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHH
Confidence            58899999999988877888888887543  2345677889999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +++...   .+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........         
T Consensus        88 ~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~--~~~~~~~~~~---------  156 (256)
T cd08529          88 KLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLG--VAKLLSDNTN---------  156 (256)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccc--cceeccCccc---------
Confidence            998653   68899999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd08529         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                    ......|++.|+|||++.+..+...+|.|++|+++|+|++|..       
T Consensus       157 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-------  199 (256)
T cd08529         157 ------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH-------  199 (256)
T ss_pred             ------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCC-------
Confidence                                          0112356788999999988877788999999999999999976       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                        ||.. .+.......+.++..+.++.  .++..+.++|++||+.+|++||++.++++|||+
T Consensus       200 --p~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         200 --PFDA-NNQGALILKIIRGVFPPVSQ--MYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             --CCCC-CCHHHHHHHHHcCCCCCCcc--ccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence              8866 55666666666665555543  478899999999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4236|consensus

Probab=100.00  E-value=4.9e-35  Score=280.06  Aligned_cols=259  Identities=22%  Similarity=0.275  Sum_probs=216.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|-|+.||-++.++++..||+|++.....  ....++++|+.||++++||.||.+...|++.+.+++|||-+ .|+..
T Consensus       572 LGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~GDML  650 (888)
T KOG4236|consen  572 LGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HGDML  650 (888)
T ss_pred             ccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cchHH
Confidence            6999999999999999999999998864432  34577899999999999999999999999999999999999 55777


Q ss_pred             HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVT---ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~---~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|-   .+++++...++++.||+-||+|||.++|+|+|+||+|+++.+.   ..+||+|||  .|+.+...        
T Consensus       651 EMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFG--fARiIgEk--------  720 (888)
T KOG4236|consen  651 EMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFG--FARIIGEK--------  720 (888)
T ss_pred             HHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecccc--ceeecchh--------
Confidence            7664   3579999999999999999999999999999999999999765   578999999  55522111        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       721 --------------------------------------------------------------------------------  720 (888)
T KOG4236|consen  721 --------------------------------------------------------------------------------  720 (888)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      +.+++.+|||.|+|||++.++.|....|+||+|+++|-.|+|-.    
T Consensus       721 --------------------------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTF----  764 (888)
T KOG4236|consen  721 --------------------------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTF----  764 (888)
T ss_pred             --------------------------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccc----
Confidence                                            12567799999999999999988888899999999998888877    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||..+++--++.+.-.--.++  ..|..+|..+.|||..+|+..=.+|.|+++.|+|||++.-..+.+|..|=-+
T Consensus       765 -----PFNEdEdIndQIQNAaFMyPp--~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRelE~~  837 (888)
T KOG4236|consen  765 -----PFNEDEDINDQIQNAAFMYPP--NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRELEVR  837 (888)
T ss_pred             -----cCCCccchhHHhhccccccCC--CchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHHHHh
Confidence                 999876655554432222222  3467789999999999999999999999999999999999888888776444


Q ss_pred             h
Q psy9736         393 A  393 (400)
Q Consensus       393 ~  393 (400)
                      .
T Consensus       838 i  838 (888)
T KOG4236|consen  838 I  838 (888)
T ss_pred             h
Confidence            3

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.6e-35  Score=292.91  Aligned_cols=247  Identities=21%  Similarity=0.257  Sum_probs=188.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+.....+|++|....      ..+.+|+.++++++|+||+++++++..++..++++|++. ++|..+
T Consensus       177 Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~  249 (461)
T PHA03211        177 LTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTY  249 (461)
T ss_pred             EccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHH
Confidence            5899999999999999999999996432      235789999999999999999999999999999999994 688887


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.........           
T Consensus       250 l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFG--la~~~~~~~~~-----------  316 (461)
T PHA03211        250 LGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFG--AACFARGSWST-----------  316 (461)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccC--Cceeccccccc-----------
Confidence            7643  68999999999999999999999999999999999999999999999999  43311000000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       317 --------------------------------------------------------------------------------  316 (461)
T PHA03211        317 --------------------------------------------------------------------------------  316 (461)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCC--ccccccc-
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK--WSFQPHF-  315 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~--ws~g~~~-  315 (400)
                                                .......||+.|+|||++.+..+...+|.||+|+++|||++|..  ++....- 
T Consensus       317 --------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~  370 (461)
T PHA03211        317 --------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE  370 (461)
T ss_pred             --------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence                                      00123468999999999998888889999999999999998753  2211100 


Q ss_pred             ccCcchhhcHHHHHHHHHhC-C--------------------------CC--Ccchh---hhhcHHHHHHHHHhhhhhhh
Q psy9736         316 LIPYLFILSCRQALYLIATN-K--------------------------KP--EIKEK---EKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~-~--------------------------~~--~~~~~---~~~s~~~~dli~~~L~~dP~  363 (400)
                      ..|+.      ..+.++++. .                          .+  ....+   ..++..+.+||.+||+.||+
T Consensus       371 ~~~~~------~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~  444 (461)
T PHA03211        371 RRPYD------AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGA  444 (461)
T ss_pred             cCCcH------HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChh
Confidence            11111      111111111 0                          00  00111   13455789999999999999


Q ss_pred             hhhcHHHHhcCccccc
Q psy9736         364 TRASASLLLKHPFLKI  379 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~  379 (400)
                      +|||+.|+|+||||+.
T Consensus       445 ~RPsa~elL~hp~f~~  460 (461)
T PHA03211        445 RRPSAAELLRLPLFQS  460 (461)
T ss_pred             hCcCHHHHhhCcccCC
Confidence            9999999999999974

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.4e-34  Score=283.28  Aligned_cols=245  Identities=17%  Similarity=0.234  Sum_probs=190.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||.|+++.|+.+.+......||+|.+...  .....+.+.+|+.+++.++|+||+++++++...      ..+++||||+
T Consensus        32 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~  111 (364)
T cd07875          32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM  111 (364)
T ss_pred             eecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCC
Confidence            68999999999988888888999987643  223446678999999999999999999887643      3579999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++ ++.+.+.. .+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.....    .    
T Consensus       112 ~~-~l~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG--~a~~~~~----~----  179 (364)
T cd07875         112 DA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGT----S----  179 (364)
T ss_pred             CC-CHHHHHHh-cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCC--CccccCC----C----
Confidence            55 77776653 47889999999999999999999999999999999999999999999999  4331100    0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (364)
T cd07875         180 --------------------------------------------------------------------------------  179 (364)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.||+|+++|+|++|..    
T Consensus       180 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~----  223 (364)
T cd07875         180 --------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV----  223 (364)
T ss_pred             --------------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCC----
Confidence                                            00122367889999999998888889999999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCC---------------------Ccc------------------hhhhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKP---------------------EIK------------------EKEKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~---------------------~~~------------------~~~~~s~~~~dl  353 (400)
                           ||.. .+..+....++.....                     ...                  .....+..+++|
T Consensus       224 -----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  297 (364)
T cd07875         224 -----LFPG-TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL  297 (364)
T ss_pred             -----CCCC-CCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence                 7755 3333333333221100                     000                  000123568999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |.+||+.||++|||+.++|+||||..
T Consensus       298 l~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         298 LSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHhcCcCcccCCCHHHHhcCccccc
Confidence            99999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=283.38  Aligned_cols=241  Identities=18%  Similarity=0.251  Sum_probs=185.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+++.||++........|++|.....      ....|+.++++++|+||+++++++..+...++|+|++. ++|.++
T Consensus        74 lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~  146 (357)
T PHA03209         74 LTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTY  146 (357)
T ss_pred             ecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHH
Confidence            68999999999998888888898874322      23579999999999999999999999999999999994 588887


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..++.++.|++.||.|||+++|+||||||+||+++..+.++|+|||  .+......              
T Consensus       147 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG--~a~~~~~~--------------  210 (357)
T PHA03209        147 LTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLG--AAQFPVVA--------------  210 (357)
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCc--cccccccC--------------
Confidence            754  368999999999999999999999999999999999999999999999999  33210000              


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (357)
T PHA03209        211 --------------------------------------------------------------------------------  210 (357)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                .......||+.|+|||++.+..+...+|.||+|+++|||+++..         |
T Consensus       211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~---------~  255 (357)
T PHA03209        211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPS---------T  255 (357)
T ss_pred             --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCC---------c
Confidence                                      00112358899999999998888889999999999999997643         2


Q ss_pred             cchhh---------cHHHHHHHHHhC---CCCCcc----------------------------hhhhhcHHHHHHHHHhh
Q psy9736         319 YLFIL---------SCRQALYLIATN---KKPEIK----------------------------EKEKLSQIFQDFLDQCL  358 (400)
Q Consensus       319 ~~~~~---------~~~~~~~~i~~~---~~~~~~----------------------------~~~~~s~~~~dli~~~L  358 (400)
                      ++...         .....+..+...   .+..++                            ...+++..+.+||++||
T Consensus       256 ~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL  335 (357)
T PHA03209        256 IFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKML  335 (357)
T ss_pred             cccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHH
Confidence            21100         001111111110   000000                            01234567788999999


Q ss_pred             hhhhhhhhcHHHHhcCccccc
Q psy9736         359 EEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       359 ~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      +.||++|||+.|+|+||||++
T Consensus       336 ~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        336 TFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             cCCcccCcCHHHHhcCchhcc
Confidence            999999999999999999985

>KOG0690|consensus

Probab=100.00  E-value=2.8e-35  Score=267.55  Aligned_cols=246  Identities=21%  Similarity=0.291  Sum_probs=205.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.|++|.+++.+.++..+|+|.++...-   .....-+.|-.+|+..+||.+..+--.|++.+++|+||||+.||.|
T Consensus       176 LGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeL  255 (516)
T KOG0690|consen  176 LGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGEL  255 (516)
T ss_pred             hcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceE
Confidence            6999999999988777777777776654321   1223345788899999999999998899999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +-.+++ ..+++...+.+-..|+.||.|||+++||.||+|.+|+++|++|.+||+|||+ +-.     ..+.        
T Consensus       256 f~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGL-CKE-----~I~~--------  321 (516)
T KOG0690|consen  256 FFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGL-CKE-----EIKY--------  321 (516)
T ss_pred             eeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeeccc-chh-----cccc--------
Confidence            887775 4799999999999999999999999999999999999999999999999991 211     1110        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       322 --------------------------------------------------------------------------------  321 (516)
T KOG0690|consen  322 --------------------------------------------------------------------------------  321 (516)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .....++||||.|+|||++.+..|+...|.|.+|++||||++|..        
T Consensus       322 ---------------------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL--------  366 (516)
T KOG0690|consen  322 ---------------------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL--------  366 (516)
T ss_pred             ---------------------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccC--------
Confidence                                       012457899999999999999999999999999999999999998        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||+. .+....+..|+..   .++.|.++|++++.|+.++|.+||.+|.     .+.|+.+|+||..+
T Consensus       367 -PFyn-~dh~kLFeLIl~e---d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  367 -PFYN-KDHEKLFELILME---DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             -cccc-cchhHHHHHHHhh---hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence             9998 4555555555554   3444777999999999999999999997     47899999999863

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.5e-34  Score=268.51  Aligned_cols=250  Identities=29%  Similarity=0.469  Sum_probs=201.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---------hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---------KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---------~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      +|.|.++.+|.+.+......+++|.+......         ..+.+.+|+.++++++|+||+++++++......++++||
T Consensus         8 ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (267)
T cd06628           8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEY   87 (267)
T ss_pred             eecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEe
Confidence            58899999999988777778888876543221         125688999999999999999999999999999999999


Q ss_pred             cCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          72 LPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        72 ~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++++|.+++.. +.+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+..........  
T Consensus        88 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~~--  163 (267)
T cd06628          88 VPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFG--ISKKLEANSLST--  163 (267)
T ss_pred             cCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccC--CCcccccccccC--
Confidence            999999999975 468999999999999999999999999999999999999999999999999  333111100000  


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                             .        
T Consensus       164 -----------------------------------------------------------------------~--------  164 (267)
T cd06628         164 -----------------------------------------------------------------------K--------  164 (267)
T ss_pred             -----------------------------------------------------------------------C--------
Confidence                                                                                   0        


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                      .........|+..|+|||.+.+..+...+|.|++|+++|+|++|..  
T Consensus       165 --------------------------------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~--  210 (267)
T cd06628         165 --------------------------------TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH--  210 (267)
T ss_pred             --------------------------------ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCC--
Confidence                                            0001223457889999999988777778999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                             ||.. .+.......+.....+.+  +..++..+.++|++||+.||++||++.++++||||
T Consensus       211 -------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         211 -------PFPD-CTQLQAIFKIGENASPEI--PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             -------CCCC-ccHHHHHHHHhccCCCcC--CcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                   8876 444555555555444444  33478899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-34  Score=265.38  Aligned_cols=245  Identities=36%  Similarity=0.578  Sum_probs=201.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.++.+.+......+++|..........+.+.+|+.++++++|+||+++++++..++..|++|||+++++|.++
T Consensus        11 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~   90 (262)
T cd06613          11 IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDI   90 (262)
T ss_pred             ecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence            58899999999988777777888887765544567889999999999999999999999999999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........            
T Consensus        91 ~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g--~~~~~~~~~~------------  156 (262)
T cd06613          91 YQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFG--VSAQLTATIA------------  156 (262)
T ss_pred             HHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccc--cchhhhhhhh------------
Confidence            864  479999999999999999999999999999999999999999999999999  3331110000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (262)
T cd06613         157 --------------------------------------------------------------------------------  156 (262)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC---CCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK---NKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                 ......++..|+|||.+...   .+...+|.|++|+++|+|++|..       
T Consensus       157 ---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~-------  202 (262)
T cd06613         157 ---------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQP-------  202 (262)
T ss_pred             ---------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCC-------
Confidence                                       01223567789999998766   66678999999999999999976       


Q ss_pred             ccCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         316 LIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                        ||.. .++......+...  .++.+.....++..+.+||++||..||++|||+.+++.|||
T Consensus       203 --p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         203 --PMFD-LHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             --CCCC-CCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence              7766 4455555445444  33344445567889999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2.7e-34  Score=270.59  Aligned_cols=246  Identities=22%  Similarity=0.345  Sum_probs=198.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|+|.++.||++.+......|++|.+.... ....+.+.+|+.++++++|+||+++++.+..+...++++||+++++|..
T Consensus         9 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~   88 (279)
T cd06619           9 LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDV   88 (279)
T ss_pred             eccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHH
Confidence            689999999999888888888998876442 2234668899999999999999999999999999999999999998865


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      +   ..+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+......               
T Consensus        89 ~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg--~~~~~~~~---------------  148 (279)
T cd06619          89 Y---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFG--VSTQLVNS---------------  148 (279)
T ss_pred             h---hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCC--cceecccc---------------
Confidence            4   247888999999999999999999999999999999999999999999999  33311000               


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       149 --------------------------------------------------------------------------------  148 (279)
T cd06619         149 --------------------------------------------------------------------------------  148 (279)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                                ......||..|+|||++.+..++..+|.|++|+++|+|++|..         ||
T Consensus       149 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~---------pf  193 (279)
T cd06619         149 --------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF---------PY  193 (279)
T ss_pred             --------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC---------Cc
Confidence                                      0122367889999999998888889999999999999999976         77


Q ss_pred             chhhc------HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         320 LFILS------CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       320 ~~~~~------~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      .....      .......+....++.++ ...++..+.+||.+||+.||++||+++++++||||.....
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         194 PQIQKNQGSLMPLQLLQCIVDEDPPVLP-VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             hhhcccccccchHHHHHHHhccCCCCCC-CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence            54221      22333333333333322 2336778999999999999999999999999999987544

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.2e-34  Score=292.95  Aligned_cols=246  Identities=17%  Similarity=0.174  Sum_probs=184.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC------CCcccccceeEeC-CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH------PNIVNYLDSYLVG-EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h------~niv~~~~~~~~~-~~~~lv~e~~~   73 (400)
                      ||+|+|++||++.+......||+|.+.... .....+..|+.+++.++|      .++++++++|..+ +++|+|++++ 
T Consensus       137 lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-  214 (467)
T PTZ00284        137 LGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-  214 (467)
T ss_pred             EEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-
Confidence            689999999999888888889999875322 223445678888877654      4588888888764 5789999998 


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCC----------------ceEEeccch
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDG----------------SVKLSKWNR  135 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~----------------~~~l~dfg~  135 (400)
                      +++|.+++.. +.+++..++.++.|++.||.|||+ .+|+||||||+||+++..+                .++|+||| 
T Consensus       215 g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG-  293 (467)
T PTZ00284        215 GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG-  293 (467)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCC-
Confidence            6788887764 479999999999999999999998 5999999999999998765                36777777 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       .+.                                                                            
T Consensus       294 -~~~----------------------------------------------------------------------------  296 (467)
T PTZ00284        294 -GCC----------------------------------------------------------------------------  296 (467)
T ss_pred             -ccc----------------------------------------------------------------------------
Confidence             211                                                                            


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                 ..   .......+||+.|+|||++.+..+....|+||
T Consensus       297 -------------------------------------------~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS  330 (467)
T PTZ00284        297 -------------------------------------------DE---RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWS  330 (467)
T ss_pred             -------------------------------------------cC---ccccccccCCccccCcHHhhcCCCCcHHHHHH
Confidence                                                       00   00123457899999999999988888999999


Q ss_pred             ccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCC---C-----------------------CCcch-------
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNK---K-----------------------PEIKE-------  342 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~---~-----------------------~~~~~-------  342 (400)
                      +||++|||++|..         ||.. .+..+.+..+.+..   +                       +....       
T Consensus       331 lGvil~elltG~~---------pf~~-~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (467)
T PTZ00284        331 MGCIIYELYTGKL---------LYDT-HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIA  400 (467)
T ss_pred             HHHHHHHHHhCCC---------CCCC-CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhh
Confidence            9999999999986         7754 33333332221110   0                       00000       


Q ss_pred             ------hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         343 ------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       343 ------~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                            ....+..+.|||++||++||++|||++|+|+||||..-.+
T Consensus       401 ~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        401 RARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             cccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence                  0001345789999999999999999999999999997433

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1e-34  Score=283.11  Aligned_cols=245  Identities=17%  Similarity=0.244  Sum_probs=188.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||.|+|+.|+.+.+......|++|.+....  ....+.+.+|+.+++.++|+||+++++++...      ...+++|||+
T Consensus        25 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~  104 (355)
T cd07874          25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELM  104 (355)
T ss_pred             eeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhh
Confidence            689999999999988888889999886432  23346678999999999999999999988643      3579999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++ ++.+.+.. .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+......        
T Consensus       105 ~~-~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg--~~~~~~~~--------  172 (355)
T cd07874         105 DA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTS--------  172 (355)
T ss_pred             cc-cHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCc--ccccCCCc--------
Confidence            65 67666653 48889999999999999999999999999999999999999999999999  33311000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (355)
T cd07874         173 --------------------------------------------------------------------------------  172 (355)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.||+|+++|+|++|..    
T Consensus       173 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~----  216 (355)
T cd07874         173 --------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----  216 (355)
T ss_pred             --------------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC----
Confidence                                            00122367889999999998888889999999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCC---------------------CCC------------------cchhhhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNK---------------------KPE------------------IKEKEKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~---------------------~~~------------------~~~~~~~s~~~~dl  353 (400)
                           ||.. .+..+....+....                     .+.                  .......+..+.+|
T Consensus       217 -----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (355)
T cd07874         217 -----LFPG-RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL  290 (355)
T ss_pred             -----CCCC-CCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHH
Confidence                 6654 22222222111100                     000                  00011134568999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |.+||+.||++|||+.|+|+||||..
T Consensus       291 i~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         291 LSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             HHHHhcCCchhcCCHHHHhcCcchhc
Confidence            99999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2e-34  Score=278.64  Aligned_cols=249  Identities=17%  Similarity=0.213  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......||+|.+...   .....+.+.+|+.++..++|+||+++++++..++..|+||||+++++|
T Consensus         9 lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L   88 (331)
T cd05624           9 IGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDL   88 (331)
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcH
Confidence            68999999999988777777888876532   122345578899999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+........         
T Consensus        89 ~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG--~a~~~~~~~~---------  157 (331)
T cd05624          89 LTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFG--SCLKMNQDGT---------  157 (331)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEecc--ceeeccCCCc---------
Confidence            999975  468999999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (331)
T cd05624         158 --------------------------------------------------------------------------------  157 (331)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                   .......||+.|+|||++..     ..+...+|.||+|+++|||++|..  
T Consensus       158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~--  206 (331)
T cd05624         158 -----------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET--  206 (331)
T ss_pred             -----------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCC--
Confidence                                         00122368899999998875     345578899999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCC-CCcc-hhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKK-PEIK-EKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKI  379 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~  379 (400)
                             ||.. .+..+....+..... ..++ ...++++.+.+||.+||..++++  |++++++++||||+.
T Consensus       207 -------Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         207 -------PFYA-ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             -------CccC-CCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence                   8876 555566666654321 1111 12346889999999999876654  569999999999986

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.8e-34  Score=272.16  Aligned_cols=261  Identities=31%  Similarity=0.508  Sum_probs=213.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|+|.++.+|.+........|++|.+.....   ...+.+.+|+.+++.++|+||+++++++..+...++|+||+. +++
T Consensus        23 lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l  101 (307)
T cd06607          23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSA  101 (307)
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCH
Confidence            6899999999998777777888887753322   233568899999999999999999999999999999999996 477


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+.+..  ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+....             
T Consensus       102 ~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg--~~~~~~-------------  166 (307)
T cd06607         102 SDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFG--SASLVS-------------  166 (307)
T ss_pred             HHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecC--cceecC-------------
Confidence            776653  468999999999999999999999999999999999999999999999999  222000             


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (307)
T cd06607         167 --------------------------------------------------------------------------------  166 (307)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    +.....|++.|+|||++.   ...+...+|.|++|+++|||++|..    
T Consensus       167 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~----  212 (307)
T cd06607         167 ------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----  212 (307)
T ss_pred             ------------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCC----
Confidence                                          011224677899999875   3445578999999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||.. .+.......+..+..+.+. ...++..+.++|++||..||++||++.+++.||||....++..+.+++++
T Consensus       213 -----p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~  285 (307)
T cd06607         213 -----PLFN-MNAMSALYHIAQNDSPTLS-SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERPPTVIIDLIQR  285 (307)
T ss_pred             -----CCCC-ccHHHHHHHHhcCCCCCCC-chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCCcHHHHHHHHH
Confidence                 7766 5566666666655554443 23478899999999999999999999999999999999999989999998


Q ss_pred             hHHHhc
Q psy9736         393 AKEAAK  398 (400)
Q Consensus       393 ~~~~~~  398 (400)
                      .++.+.
T Consensus       286 ~~~~~~  291 (307)
T cd06607         286 TKDAVR  291 (307)
T ss_pred             HHHHhh
Confidence            887654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.9e-35  Score=273.19  Aligned_cols=247  Identities=29%  Similarity=0.438  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHH--HHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKE--LIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~--~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.|+++.+.....++|+|.+.........  ...+|+.++++++|+||+++++++..+...+++|||+++++|.
T Consensus         7 lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~   86 (260)
T PF00069_consen    7 LGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQ   86 (260)
T ss_dssp             EEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHH
T ss_pred             EEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence            68999999999999999999999999876543332  2356999999999999999999999999999999999988999


Q ss_pred             HHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++. ...+++..+..++.|++.||.+||+.+++|+||||+||+++.++.++|+|||  .+...    ...         
T Consensus        87 ~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg--~~~~~----~~~---------  151 (260)
T PF00069_consen   87 DYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFG--SSVKL----SEN---------  151 (260)
T ss_dssp             HHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGT--TTEES----TST---------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc----ccc---------
Confidence            9997 5689999999999999999999999999999999999999999999999999  33211    000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       152 --------------------------------------------------------------------------------  151 (260)
T PF00069_consen  152 --------------------------------------------------------------------------------  151 (260)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-cCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-DKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                ........+|..|+|||++. .......+|.|++|+++|+|++|..        
T Consensus       152 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~--------  197 (260)
T PF00069_consen  152 --------------------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKL--------  197 (260)
T ss_dssp             --------------------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSS--------
T ss_pred             --------------------------cccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence                                      00123346788999999988 6767789999999999999999986        


Q ss_pred             cCcchh--hcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         317 IPYLFI--LSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       317 ~P~~~~--~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                       ||...  .+.............. ........+..+.++|.+||+.||++|||+.++++||||
T Consensus       198 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  198 -PFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             -SSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             -ccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence             77763  1233333333222100 000011123689999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.8e-34  Score=269.53  Aligned_cols=245  Identities=35%  Similarity=0.500  Sum_probs=195.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|.++.|+++.+......|++|............+.+|+.++++++|+||+++++++..+...++++||+++++|.++
T Consensus        17 lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~   96 (267)
T cd06646          17 VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDI   96 (267)
T ss_pred             eecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHH
Confidence            58999999999988777788888887655444456678999999999999999999999999999999999999999998


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      +.. ..+++..+..++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+.......              
T Consensus        97 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg--~~~~~~~~~--------------  160 (267)
T cd06646          97 YHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFG--VAAKITATI--------------  160 (267)
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCc--cceeecccc--------------
Confidence            864 478999999999999999999999999999999999999999999999999  333111000              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (267)
T cd06646         161 --------------------------------------------------------------------------------  160 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                               .......|++.|+|||.+..   ..+...+|.|++|+++|||++|..        
T Consensus       161 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~--------  207 (267)
T cd06646         161 -------------------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP--------  207 (267)
T ss_pred             -------------------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC--------
Confidence                                     00122357788999998753   334467899999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         317 IPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                       ||.. ..+.+....+...  .++.......++..+.+||++||..||++|||++++++|+|
T Consensus       208 -p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         208 -PMFD-LHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             -Cccc-cchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence             7755 3333333333222  22223333457889999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-34  Score=268.07  Aligned_cols=245  Identities=30%  Similarity=0.495  Sum_probs=200.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCC------EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGE------ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~------~~~lv~e~~~   73 (400)
                      +|.|.++.+|.+.+.....++++|.+..... ..+.+.+|+.+++++ .|+||+++++++....      ..++++||++
T Consensus        14 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~   92 (275)
T cd06608          14 IGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG   92 (275)
T ss_pred             ecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC
Confidence            5889999999998887778889988765443 446789999999998 7999999999987543      5899999999


Q ss_pred             CCChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          74 GGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        74 ~~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      +++|.+++..     ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........  
T Consensus        93 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~--~~~~~~~~~~--  168 (275)
T cd06608          93 GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFG--VSAQLDSTLG--  168 (275)
T ss_pred             CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCc--cceecccchh--
Confidence            9999988763     368999999999999999999999999999999999999999999999999  3321110000  


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (275)
T cd06608         169 --------------------------------------------------------------------------------  168 (275)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-----CCCcccCCCCccchhhhh
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-----NKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~d~~s~g~~~~~~  303 (400)
                                                           ......|++.|+|||++...     .+...+|.|++|+++|+|
T Consensus       169 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l  211 (275)
T cd06608         169 -------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIEL  211 (275)
T ss_pred             -------------------------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHH
Confidence                                                 01122467788888877532     234678999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      ++|..         ||.. .+......++..+..+.+..+..++..+.+||.+||..||++|||+.++++|||+
T Consensus       212 ~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         212 ADGKP---------PLCD-MHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HhCCC---------Cccc-cchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            99976         8865 5666777777777666666666688899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=9.7e-35  Score=294.85  Aligned_cols=248  Identities=20%  Similarity=0.268  Sum_probs=203.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC--------EEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE--------ELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--------~~~lv~e   70 (400)
                      ||+|+|+.||.+.+......||+|.+....  ......+.+|+.++..++|+|++++++.+....        .+++|||
T Consensus        40 LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~E  119 (496)
T PTZ00283         40 LGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLD  119 (496)
T ss_pred             EecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEe
Confidence            689999999999888888889999876542  234566889999999999999999987775432        4689999


Q ss_pred             ccCCCChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          71 YLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        71 ~~~~~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      |+++++|.+++..     ..+++..+..++.|++.||.|+|+.+|+||||||+||+++.++.++|+|||  +++.+....
T Consensus       120 y~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG--ls~~~~~~~  197 (496)
T PTZ00283        120 YANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG--FSKMYAATV  197 (496)
T ss_pred             CCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc--cCeeccccc
Confidence            9999999998864     258999999999999999999999999999999999999999999999999  433111000


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ..                                                                              
T Consensus       198 ~~------------------------------------------------------------------------------  199 (496)
T PTZ00283        198 SD------------------------------------------------------------------------------  199 (496)
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                             ....+..||+.|+|||++.+..+...+|+||+|+++|||++
T Consensus       200 ---------------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt  240 (496)
T PTZ00283        200 ---------------------------------------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT  240 (496)
T ss_pred             ---------------------------------------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence                                                   01234578999999999998888899999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |..         ||.. .+..+.+..+..+....+  +..+++.+.+|+.+||..||++||++.++++|||++.
T Consensus       241 G~~---------Pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        241 LKR---------PFDG-ENMEEVMHKTLAGRYDPL--PPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCC---------CCCC-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            986         8876 566666666666644433  3457889999999999999999999999999999875

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.8e-34  Score=266.15  Aligned_cols=244  Identities=31%  Similarity=0.526  Sum_probs=201.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.++.+........+++|.+.....  .+.+.+|+.++++++|+||+++++.+..+...|+++||+.+++|.++
T Consensus        11 i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   88 (256)
T cd06612          11 LGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDI   88 (256)
T ss_pred             hcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHH
Confidence            5889999999998877677788888754432  67899999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..++.++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+........            
T Consensus        89 l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg--~~~~~~~~~~------------  154 (256)
T cd06612          89 MKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFG--VSGQLTDTMA------------  154 (256)
T ss_pred             HHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccc--cchhcccCcc------------
Confidence            864  368999999999999999999999999999999999999999999999999  3331111000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (256)
T cd06612         155 --------------------------------------------------------------------------------  154 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                 ......|+..|+|||++.+..++..+|.|++|+++|+|++|..         |
T Consensus       155 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~---------p  198 (256)
T cd06612         155 ---------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKP---------P  198 (256)
T ss_pred             ---------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCC---------C
Confidence                                       0122346778999999988877788999999999999999976         7


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      |.. .++.+....+.....+....+..++..+.++|.+||+.||++|||+.++|+||||
T Consensus       199 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         199 YSD-IHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             CCC-cchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            765 4444444444444444555555678899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.6e-34  Score=272.34  Aligned_cols=246  Identities=23%  Similarity=0.292  Sum_probs=191.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.|+++.+...+..+++|.+.....  ...+.+.+|+.++++++|+||+++++++......++++||+. ++|.
T Consensus         8 l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~   86 (284)
T cd07839           8 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLK   86 (284)
T ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHH
Confidence            5889999999998888888888888754322  223557789999999999999999999999999999999996 4787


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.+..  +.+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........          
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg--~~~~~~~~~~----------  154 (284)
T cd07839          87 KYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFG--LARAFGIPVR----------  154 (284)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccc--hhhccCCCCC----------
Confidence            77653  468999999999999999999999999999999999999999999999999  3331100000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (284)
T cd07839         155 --------------------------------------------------------------------------------  154 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+++.|+|||++.+.. +...+|.|++|+++|+|++|..       
T Consensus       155 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~-------  198 (284)
T cd07839         155 -----------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR-------  198 (284)
T ss_pred             -----------------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCC-------
Confidence                                         011224677899999887643 4578999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCC-------------------CCcc-------hhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         316 LIPYLFILSCRQALYLIATNKK-------------------PEIK-------EKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~-------------------~~~~-------~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                        |+....+..+.+..+.+...                   +...       ...++++.+.+||++||+.||++|||++
T Consensus       199 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~  276 (284)
T cd07839         199 --PLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAE  276 (284)
T ss_pred             --CCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHH
Confidence              77654554444443322100                   0000       0123677899999999999999999999


Q ss_pred             HHhcCccc
Q psy9736         370 LLLKHPFL  377 (400)
Q Consensus       370 ~~l~hp~~  377 (400)
                      ++++||||
T Consensus       277 ~il~h~~f  284 (284)
T cd07839         277 EALQHPYF  284 (284)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.2e-34  Score=269.57  Aligned_cols=246  Identities=28%  Similarity=0.449  Sum_probs=198.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeC-----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVG-----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~-----~~~~lv~e~~~~   74 (400)
                      +|.|.++.||++.+......+++|.+.... ...+.+.+|+.+++++ +|+|++++++++...     +..++++||+++
T Consensus        30 l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~  108 (291)
T cd06639          30 IGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNG  108 (291)
T ss_pred             eecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCC
Confidence            578999999999888888888888875432 2346678899999998 899999999988753     368999999999


Q ss_pred             CChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++..     ..+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.........  
T Consensus       109 ~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg--~~~~~~~~~~~--  184 (291)
T cd06639         109 GSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFG--VSAQLTSTRLR--  184 (291)
T ss_pred             CcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecc--cchhccccccc--
Confidence            999988752     368999999999999999999999999999999999999999999999999  33311100000  


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (291)
T cd06639         185 --------------------------------------------------------------------------------  184 (291)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-----CCcccCCCCccchhhhhc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-----KNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~d~~s~g~~~~~~~  304 (400)
                                                           .....|+..|+|||++....     +...+|.|++|+++|||+
T Consensus       185 -------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~  227 (291)
T cd06639         185 -------------------------------------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG  227 (291)
T ss_pred             -------------------------------------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence                                                 01124677888899875432     347899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                      +|..         ||.. .++...+..+.++..+.+..+..++..+.+||.+||+.||++||++.++++||||+
T Consensus       228 ~g~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         228 DGDP---------PLFD-MHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             hCCC---------CCCC-CcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            9986         7776 56666666777776666655666788899999999999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.7e-34  Score=278.14  Aligned_cols=243  Identities=17%  Similarity=0.275  Sum_probs=187.5

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||.|+|+.||.+.     .......||+|.+.... ....+.+.+|+.+++.+ +|+||+++++++... +.++++|||+
T Consensus        15 lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~   94 (338)
T cd05102          15 LGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFC   94 (338)
T ss_pred             eccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecC
Confidence            6899999999885     23344568888876432 22346689999999999 899999999988754 4689999999


Q ss_pred             CCCChHHHHhhc---------------------------------------------------------------CCCHH
Q psy9736          73 PGGSLTDVVTET---------------------------------------------------------------CMDEG   89 (400)
Q Consensus        73 ~~~~L~~~i~~~---------------------------------------------------------------~l~~~   89 (400)
                      ++|+|.+++...                                                               .+++.
T Consensus        95 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  174 (338)
T cd05102          95 KYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTME  174 (338)
T ss_pred             CCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHH
Confidence            999999888631                                                               36777


Q ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhh
Q psy9736          90 QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIES  169 (400)
Q Consensus        90 ~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~  169 (400)
                      .+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..........                     
T Consensus       175 ~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG--~a~~~~~~~~~~---------------------  231 (338)
T cd05102         175 DLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFG--LARDIYKDPDYV---------------------  231 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecc--cccccccCcchh---------------------
Confidence            889999999999999999999999999999999999999999999  443221110000                     


Q ss_pred             ccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCC
Q psy9736         170 STGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPL  249 (400)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (400)
                                                                                                      
T Consensus       232 --------------------------------------------------------------------------------  231 (338)
T cd05102         232 --------------------------------------------------------------------------------  231 (338)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHH
Q psy9736         250 STPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQA  328 (400)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~  328 (400)
                                      ......+++.|+|||++.+..+...+|+||+|+++|||++ |..         ||.........
T Consensus       232 ----------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~---------pf~~~~~~~~~  286 (338)
T cd05102         232 ----------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS---------PYPGVQINEEF  286 (338)
T ss_pred             ----------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCC---------CCCCCCccHHH
Confidence                            0112245678999999998888889999999999999996 765         77663333333


Q ss_pred             HHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         329 LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       329 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ...+..+.....  +...++.+.+|+.+||..||++|||+.++++
T Consensus       287 ~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         287 CQRLKDGTRMRA--PENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHHHhcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            333444433322  3457889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=5.3e-34  Score=272.74  Aligned_cols=249  Identities=25%  Similarity=0.369  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|.|+.|+++.+......+++|.+..... ...+++.+|++++++++|+||+++++++..++.+++++||+++++|.+
T Consensus         9 lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~   88 (308)
T cd06615           9 LGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ   88 (308)
T ss_pred             ccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHH
Confidence            6899999999998887777888888764422 234668899999999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.. +.+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||  .+.....    .         
T Consensus        89 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~----~---------  153 (308)
T cd06615          89 VLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLID----S---------  153 (308)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCC--Ccccccc----c---------
Confidence            9875 468999999999999999999997 599999999999999999999999999  3221100    0         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (308)
T cd06615         154 --------------------------------------------------------------------------------  153 (308)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......|++.|+|||++.+..+...+|.|++|+++|+|++|..         
T Consensus       154 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~---------  196 (308)
T cd06615         154 ----------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRY---------  196 (308)
T ss_pred             ----------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCC---------
Confidence                                        0122367889999999888777788999999999999999976         


Q ss_pred             CcchhhcHHH------------------------------------HHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhh
Q psy9736         318 PYLFILSCRQ------------------------------------ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       318 P~~~~~~~~~------------------------------------~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~d  361 (400)
                      ||... +...                                    ....+....++.++. ..++..+.+|+.+||..|
T Consensus       197 p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~  274 (308)
T cd06615         197 PIPPP-DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS-GAFSDEFQDFVDKCLKKN  274 (308)
T ss_pred             CCCCc-chhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcC-cccCHHHHHHHHHHccCC
Confidence            55331 1111                                    111112222222221 236778999999999999


Q ss_pred             hhhhhcHHHHhcCccccccCCC
Q psy9736         362 VETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      |++|||+.++++||||......
T Consensus       275 P~~Rpt~~~ll~~~~~~~~~~~  296 (308)
T cd06615         275 PKERADLKELTKHPFIKRAELE  296 (308)
T ss_pred             hhhCcCHHHHhcChhhhhcccc
Confidence            9999999999999999875443

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.9e-34  Score=270.30  Aligned_cols=244  Identities=20%  Similarity=0.250  Sum_probs=186.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhC---CCCCcccccceeEe-----CCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMREN---KHPNIVNYLDSYLV-----GEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~-----~~~~~lv~e   70 (400)
                      ||+|+++.||++.+......|++|.+.....  .....+.+|+.+++.+   +|+||+++++++..     ....++++|
T Consensus         8 lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e   87 (288)
T cd07863           8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFE   87 (288)
T ss_pred             EeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEc
Confidence            6899999999999888888888887764321  1234456788877765   79999999998764     246899999


Q ss_pred             ccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          71 YLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        71 ~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      |+.+ +|.+++..   ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......  
T Consensus        88 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg--~~~~~~~~~--  162 (288)
T cd07863          88 HVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG--LARIYSCQM--  162 (288)
T ss_pred             cccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccC--ccccccCcc--
Confidence            9964 88887764   248999999999999999999999999999999999999999999999999  333110000  


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (288)
T cd07863         163 --------------------------------------------------------------------------------  162 (288)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                            ......||+.|+|||++.+..+...+|.||+|+++|+|++|.
T Consensus       163 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~  204 (288)
T cd07863         163 --------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK  204 (288)
T ss_pred             --------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCC
Confidence                                                  011235788999999998888888999999999999999997


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCC--C------C---------------Cc-chhhhhcHHHHHHHHHhhhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNK--K------P---------------EI-KEKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~--~------~---------------~~-~~~~~~s~~~~dli~~~L~~dP~  363 (400)
                      -         ||.. ......+..+....  +      .               .. .....++..+.+||.+||++||+
T Consensus       205 ~---------~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  274 (288)
T cd07863         205 P---------LFCG-NSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPH  274 (288)
T ss_pred             c---------CcCC-CCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcc
Confidence            4         5544 33333333332210  0      0               00 00123567889999999999999


Q ss_pred             hhhcHHHHhcCccc
Q psy9736         364 TRASASLLLKHPFL  377 (400)
Q Consensus       364 ~R~s~~~~l~hp~~  377 (400)
                      +|||+.+++.||||
T Consensus       275 ~R~t~~~~l~hp~f  288 (288)
T cd07863         275 KRISAFRALQHPFF  288 (288)
T ss_pred             cCCCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=5.4e-34  Score=269.61  Aligned_cols=247  Identities=19%  Similarity=0.242  Sum_probs=197.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||.+.+......+|+|.+....   ....+.+.+|+.++++++|+|++++++.+..++..++++||+++++|
T Consensus         8 lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   87 (285)
T cd05632           8 LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDL   87 (285)
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccH
Confidence            689999999999888888888888875332   12234578899999999999999999999999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.+..   ..+++..+..++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||  .+....    ..      
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg--~~~~~~----~~------  155 (285)
T cd05632          88 KFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLG--LAVKIP----EG------  155 (285)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCC--cceecC----CC------
Confidence            887753   258999999999999999999999999999999999999999999999999  332110    00      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (285)
T cd05632         156 --------------------------------------------------------------------------------  155 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......|++.|+|||++.+..+...+|.|++|+++|+|++|..      
T Consensus       156 ------------------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~------  199 (285)
T cd05632         156 ------------------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQS------  199 (285)
T ss_pred             ------------------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCC------
Confidence                                          00122368899999999988888888999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHH---hCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccccC
Q psy9736         315 FLIPYLFILSCRQALYLIA---TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIAR  381 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~---~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~~  381 (400)
                         ||... ........+.   ......+  +..++..+.+|+.+||+.||++||+     +++++.|+||....
T Consensus       200 ---P~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         200 ---PFRGR-KEKVKREEVDRRVLETEEVY--SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             ---CCCCC-CHHHHHHHHHHhhhcccccc--CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence               88763 2222222221   1111111  2346778999999999999999999     89999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=6.3e-34  Score=264.98  Aligned_cols=251  Identities=27%  Similarity=0.453  Sum_probs=206.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|+++.+|.+.+......|++|.+......  ..+.+.+|+.+++.++|+||+++++.+......++++||+++++|.
T Consensus         8 lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (264)
T cd06626           8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLE   87 (264)
T ss_pred             eecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHH
Confidence            68899999999987766777888887655442  5677899999999999999999999999899999999999999999


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++..+ .+++..++.++.+++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+..........         
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g--~~~~~~~~~~~~---------  156 (264)
T cd06626          88 ELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFG--CAVKLKNNTTTM---------  156 (264)
T ss_pred             HHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccc--cccccCCCCCcc---------
Confidence            998765 58899999999999999999999999999999999999999999999999  333111111000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (264)
T cd06626         157 --------------------------------------------------------------------------------  156 (264)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC---CCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN---KNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                ........+++.|+|||++....   ....+|.|++|+++|++++|..      
T Consensus       157 --------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~------  204 (264)
T cd06626         157 --------------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR------  204 (264)
T ss_pred             --------------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCC------
Confidence                                      00011235778899999988765   5678999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||....+.......+..+..+.++....++..+.+||.+||+.+|++|||+++++.||||
T Consensus       205 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         205 ---PWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ---CccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence               887655666666666666666666555568899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=7.2e-34  Score=264.78  Aligned_cols=246  Identities=22%  Similarity=0.257  Sum_probs=201.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.++.+.+......+++|.+....   ....+.+.+|+.+++.++|+||+++++.+..+...++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999988877888888875332   22346789999999999999999999999989999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..+..++.|++.||.|+|+.+++|+||+|+||+++.++.++|+|||  .+.......           
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~--~~~~~~~~~-----------  147 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFG--FAKKLKSGQ-----------  147 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCC--cccccCccc-----------
Confidence            9998754 68999999999999999999999999999999999999999999999999  333111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (262)
T cd05572         148 --------------------------------------------------------------------------------  147 (262)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......|++.|+|||.+.+..+...+|.|++|+++|++++|..        
T Consensus       148 -----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  190 (262)
T cd05572         148 -----------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRP--------  190 (262)
T ss_pred             -----------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCC--------
Confidence                                         0112256778999999888777788999999999999999987        


Q ss_pred             cCcchhh-cHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccc
Q psy9736         317 IPYLFIL-SCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~-~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~  379 (400)
                       ||.... ++.+....+..+ .....  +...+..+.++|.+||..||++|++     ++|+++||||+.
T Consensus       191 -p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         191 -PFGEDDEDPMEIYNDILKGNGKLEF--PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             -CcCCCCCCHHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence             887643 255555555532 22222  3335789999999999999999999     999999999985

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=5.8e-34  Score=266.70  Aligned_cols=244  Identities=29%  Similarity=0.491  Sum_probs=194.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeC------CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVG------EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~------~~~~lv~e~~~   73 (400)
                      +|.|.++.||++........|++|....... ....+.+|+.+++++ +|+||+++++++...      ...++++||++
T Consensus        14 lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~   92 (272)
T cd06637          14 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG   92 (272)
T ss_pred             eeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCC
Confidence            5889999999998887778888888764432 446688999999998 799999999998753      46899999999


Q ss_pred             CCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          74 GGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        74 ~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++|.+++..   ..+++..+..++.|++.|+.|||+++++|+|++|+||+++.++.++|+|||  .+.......     
T Consensus        93 ~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg--~~~~~~~~~-----  165 (272)
T cd06637          93 AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG--VSAQLDRTV-----  165 (272)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCC--Cceeccccc-----
Confidence            9999998875   258999999999999999999999999999999999999999999999999  333110000     


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (272)
T cd06637         166 --------------------------------------------------------------------------------  165 (272)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcC
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                        .......|++.|+|||++..     ..+...+|.|++|+++|||++
T Consensus       166 ----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~  211 (272)
T cd06637         166 ----------------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  211 (272)
T ss_pred             ----------------------------------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence                                              00123357788999998862     345567999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      |..         ||.. ..+......+.....+... ...++..+.+||.+||..||++|||+.+++.||||
T Consensus       212 g~~---------p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         212 GAP---------PLCD-MHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCC---------Cccc-cCHHHHHHHHhcCCCCCCC-CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            976         7765 4455555444444333222 23477899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=7.7e-34  Score=265.02  Aligned_cols=249  Identities=23%  Similarity=0.393  Sum_probs=196.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|+|+|+.||++.+. ....+++|.+.....      ...+.+.+|++++++++|+||+++++++..+...++++||+++
T Consensus         8 ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (265)
T cd06631           8 LGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPG   86 (265)
T ss_pred             EeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCC
Confidence            589999999998653 455678887654321      1235688999999999999999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|.+++.+ +.+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+..........     
T Consensus        87 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~~-----  159 (265)
T cd06631          87 GSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFG--CARRLAWVGLHG-----  159 (265)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccch--hhHhhhhccccc-----
Confidence            999999876 478999999999999999999999999999999999999999999999999  433211000000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                          .           
T Consensus       160 --------------------------------------------------------------------~-----------  160 (265)
T cd06631         160 --------------------------------------------------------------------T-----------  160 (265)
T ss_pred             --------------------------------------------------------------------c-----------
Confidence                                                                                0           


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                   .........|+..|+|||++.+..+...+|.|++|+++|++++|..     
T Consensus       161 -----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~-----  206 (265)
T cd06631         161 -----------------------------HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKP-----  206 (265)
T ss_pred             -----------------------------ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCC-----
Confidence                                         0000122358889999999988777788999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                          ||.. .+.......+...  ..+.+  +..++..+.+||++||+.+|++||++.++++||||
T Consensus       207 ----p~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         207 ----PLAS-MDRLAAMFYIGAHRGLMPRL--PDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             ----cccc-CChHHHHHHhhhccCCCCCC--CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                8865 4444444444433  22233  33478899999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG2345|consensus

Probab=100.00  E-value=2.9e-35  Score=258.73  Aligned_cols=256  Identities=21%  Similarity=0.217  Sum_probs=203.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~~   75 (400)
                      +|.|+|..|+++++.-+...+|+|++.-....+.+..++||++.++++|+|++++++....+     ...|++++|...|
T Consensus        29 LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~G  108 (302)
T KOG2345|consen   29 LGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRG  108 (302)
T ss_pred             ecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccc
Confidence            68999999999999999999999999877777888899999999999999999998876543     3589999999999


Q ss_pred             ChHHHHhh----c-CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          76 SLTDVVTE----T-CMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        76 ~L~~~i~~----~-~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      +|.+.+.+    + .+++.+++.++.+++.||.+||+..  +.||||||.||+++..+.+++.|||+.....+....+..
T Consensus       109 sl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~  188 (302)
T KOG2345|consen  109 SLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQ  188 (302)
T ss_pred             cHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHH
Confidence            99998864    2 5899999999999999999999986  999999999999999999999999943333344555566


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ....++|+...+|.+|+|||++..+-.+                                                    
T Consensus       189 a~~lQe~a~e~Ct~pyRAPELf~vk~~~----------------------------------------------------  216 (302)
T KOG2345|consen  189 ALRLQEWAEERCTIPYRAPELFNVKSHC----------------------------------------------------  216 (302)
T ss_pred             HHHHHHHHHHhCCCcccCchheecccCc----------------------------------------------------
Confidence            6677788889999999999887775421                                                    


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                                               ..+..+|+||+||++|+|+.|.-
T Consensus       217 ---------------------------------------------------------ti~ertDIWSLGCtLYa~mf~~s  239 (302)
T KOG2345|consen  217 ---------------------------------------------------------TITERTDIWSLGCTLYAMMFGES  239 (302)
T ss_pred             ---------------------------------------------------------ccccccchhhhhHHHHHHHHcCC
Confidence                                                                     11256688888888888888865


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                               ||......-.-+..-+.+..-.++...++|+.+.+||..||+.||.+||++.+++.+
T Consensus       240 ---------Pfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  240 ---------PFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ---------cchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence                     665532221111111122223344445589999999999999999999999999875

>KOG0197|consensus

Probab=100.00  E-value=3.1e-34  Score=277.31  Aligned_cols=239  Identities=19%  Similarity=0.272  Sum_probs=201.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|-|+.|+.+.-+.. .+|++|.++... ...+.|.+|+++|++|+|+|||++++++..++.++|||||++.|+|.++
T Consensus       214 LG~G~FG~V~~g~~~~~-~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~y  291 (468)
T KOG0197|consen  214 LGSGQFGEVWLGKWNGS-TKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDY  291 (468)
T ss_pred             hcCCccceEEEEEEcCC-CcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHH
Confidence            79999999999977554 478888876553 3557799999999999999999999999998899999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.   ..+.......++.||+.|++||.++++|||||-..|||++.+..+||+|||  +++...++....         
T Consensus       292 Lr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFG--LAr~~~d~~Y~~---------  360 (468)
T KOG0197|consen  292 LRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFG--LARLIGDDEYTA---------  360 (468)
T ss_pred             hhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccc--cccccCCCceee---------
Confidence            986   368889999999999999999999999999999999999999999999999  776222222111         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                     .                                
T Consensus       361 -----------------------------------------------~--------------------------------  361 (468)
T KOG0197|consen  361 -----------------------------------------------S--------------------------------  361 (468)
T ss_pred             -----------------------------------------------c--------------------------------
Confidence                                                           0                                


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                    ....-..-|.|||++....++.++|+||+|++++|+.+-..        .
T Consensus       362 ------------------------------~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~--------~  403 (468)
T KOG0197|consen  362 ------------------------------EGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR--------V  403 (468)
T ss_pred             ------------------------------CCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC--------C
Confidence                                          00011346899999999999999999999999999988632        2


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      ||.. ++..+.+..+.+|..  ++.|..+++.+.++|..||+.+|++|||.+.+.
T Consensus       404 py~~-msn~ev~~~le~GyR--lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  404 PYPG-MSNEEVLELLERGYR--LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             CCCC-CCHHHHHHHHhccCc--CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            6666 899999999999854  455667999999999999999999999999654

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.2e-33  Score=269.72  Aligned_cols=266  Identities=18%  Similarity=0.226  Sum_probs=205.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.||++.+......|++|.+....   ....+.+.+|+.+++.++|+||+++++.+..++..+++|||+++++|
T Consensus         9 l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L   88 (305)
T cd05609           9 ISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDC   88 (305)
T ss_pred             eecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcH
Confidence            588999999999888888889998876442   22345678999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+..........        
T Consensus        89 ~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg--~~~~~~~~~~~~--------  158 (305)
T cd05609          89 ATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFG--LSKIGLMSLTTN--------  158 (305)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCC--CccccCcCcccc--------
Confidence            999875 468999999999999999999999999999999999999999999999999  333110000000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                  .+...                 .             
T Consensus       159 --------------------------------------------~~~~~-----------------~-------------  164 (305)
T cd05609         159 --------------------------------------------LYEGH-----------------I-------------  164 (305)
T ss_pred             --------------------------------------------ccccc-----------------c-------------
Confidence                                                        00000                 0             


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                            .............|+..|+|||.+....++..+|.|++|+++||+++|..        
T Consensus       165 ----------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~--------  214 (305)
T cd05609         165 ----------------------EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV--------  214 (305)
T ss_pred             ----------------------ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCC--------
Confidence                                  00000001123457889999999988888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCccccccCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIARP  382 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~~~  382 (400)
                       ||.. .++.+....+.............++..+.++|.+||+.||++||+   +.++|+||||...+-
T Consensus       215 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~  281 (305)
T cd05609         215 -PFFG-DTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW  281 (305)
T ss_pred             -CCCC-CCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence             8876 455566666655533222222247788999999999999999998   799999999976443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=270.41  Aligned_cols=278  Identities=19%  Similarity=0.252  Sum_probs=207.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.||.+.+......+++|.+......   ..+.+.+|+.+++.++|+||+++++.+..+...++++||+.+++|
T Consensus         9 ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   88 (316)
T cd05574           9 LGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGEL   88 (316)
T ss_pred             ecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCH
Confidence            68999999999988777788888887654322   346688999999999999999999999999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+++..   ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........      
T Consensus        89 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg--~~~~~~~~~~~~------  160 (316)
T cd05574          89 FRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFD--LSKQSDVEPPPV------  160 (316)
T ss_pred             HHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecc--hhhccccccccc------
Confidence            998875   358999999999999999999999999999999999999999999999999  333111110000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                .........                  +++.                                       
T Consensus       161 ----------~~~~~~~~~------------------~~~~---------------------------------------  173 (316)
T cd05574         161 ----------SKALRKGSR------------------RSSV---------------------------------------  173 (316)
T ss_pred             ----------ccccccccc------------------cccc---------------------------------------
Confidence                      000000000                  0000                                       


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                    .+.   ....-........+...||..|+|||++.+..+...+|.||+|+++|+|++|..      
T Consensus       174 --------------~~~---~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~------  230 (316)
T cd05574         174 --------------NSI---PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTT------  230 (316)
T ss_pred             --------------ccc---chhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCC------
Confidence                          000   000000001112345678999999999998888888999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc----HHHHhcCccccccC
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS----ASLLLKHPFLKIAR  381 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~~~l~hp~~~~~~  381 (400)
                         ||.. .+....+..+.... ...+.....+..+.++|.+||..||++|||    ++++|+||||+..+
T Consensus       231 ---pf~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         231 ---PFKG-SNRDETFSNILKKE-VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             ---CCCC-CchHHHHHHHhcCC-ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence               8866 44445555555432 223333336889999999999999999999    99999999999754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.4e-33  Score=262.94  Aligned_cols=250  Identities=33%  Similarity=0.515  Sum_probs=202.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.+|++........+++|...... ......+.+|+.+++.++|+|++++++.+..+...++++|++++++|.+
T Consensus         9 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~   88 (267)
T cd06610           9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLD   88 (267)
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHH
Confidence            588999999998877777788888876433 2245678999999999999999999999999999999999999999999


Q ss_pred             HHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTE----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++..    ..+++..+..++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+..+.......       
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~--~~~~~~~~~~~~-------  159 (267)
T cd06610          89 IMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFG--VSASLADGGDRT-------  159 (267)
T ss_pred             HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccc--hHHHhccCcccc-------
Confidence            9865    258999999999999999999999999999999999999999999999999  333221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (267)
T cd06610         160 --------------------------------------------------------------------------------  159 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                  ........|+..|+|||++... .....+|.|++|+++|+|++|..      
T Consensus       160 ----------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~------  205 (267)
T cd06610         160 ----------------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAA------  205 (267)
T ss_pred             ----------------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCC------
Confidence                                        0012334678899999988776 56678999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchh---hhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||.. .+..+....+.+..++.+...   ..+++.+.+|+.+||..||++|||+.++++||||
T Consensus       206 ---p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         206 ---PYSK-YPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ---Cccc-cChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence               8876 555566666666554444332   2578899999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=8.5e-34  Score=268.75  Aligned_cols=244  Identities=24%  Similarity=0.316  Sum_probs=201.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|.++.||.+.+......+++|.+....   ....+.+.+|+.++++++|+||+++++++..+...+++|||+++++|
T Consensus         9 ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   88 (290)
T cd05580           9 LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGEL   88 (290)
T ss_pred             eecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCH
Confidence            588999999998887777788888765321   22456688999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.||.|||+.+++|+||+|.||+++.++.++|+|||  .+......            
T Consensus        89 ~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg--~~~~~~~~------------  154 (290)
T cd05580          89 FSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFG--FAKRVKGR------------  154 (290)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCC--CccccCCC------------
Confidence            999865 468999999999999999999999999999999999999999999999999  33211000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (290)
T cd05580         155 --------------------------------------------------------------------------------  154 (290)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                    .....|++.|+|||.+........+|.|++|+++|+|++|..        
T Consensus       155 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  196 (290)
T cd05580         155 ------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYP--------  196 (290)
T ss_pred             ------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCC--------
Confidence                                          112357788999999887777788999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccccC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  381 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~~  381 (400)
                       ||.. .+.......+..+.. .+  +..++..+.++|.+||+.||++|+     +++|+++||||....
T Consensus       197 -p~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         197 -PFFD-DNPIQIYEKILEGKV-RF--PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             -CCCC-CCHHHHHHHHhcCCc-cC--CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence             8766 445555555554432 22  334678999999999999999999     999999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG1989|consensus

Probab=100.00  E-value=4.7e-35  Score=297.07  Aligned_cols=248  Identities=21%  Similarity=0.277  Sum_probs=193.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccce-eEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDS-YLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~-~~~~------~~~~lv~e~~   72 (400)
                      |+.|+|..||++.+...+.++|+|.+...+....+.+.+||++|+.|+ |+|||.|++. ....      -.++|+||||
T Consensus        45 LAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC  124 (738)
T KOG1989|consen   45 LAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYC  124 (738)
T ss_pred             EccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhc
Confidence            578999999999999998999999998887777788999999999996 9999999993 3221      2678999999


Q ss_pred             CCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          73 PGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        73 ~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~--~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      +|+.|-+++..   ..|++.+++.|+.+++.|+.+||..  .|||||||.||||++.+|..||||||++...........
T Consensus       125 ~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~  204 (738)
T KOG1989|consen  125 KGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQ  204 (738)
T ss_pred             cCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHH
Confidence            99999999974   3699999999999999999999987  599999999999999999999999994333322111111


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .                                               +.++..     +|                   
T Consensus       205 e-----------------------------------------------~~~ve~-----eI-------------------  213 (738)
T KOG1989|consen  205 E-----------------------------------------------VNYVEE-----EI-------------------  213 (738)
T ss_pred             H-----------------------------------------------HHHHHH-----HH-------------------
Confidence            0                                               000000     00                   


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhc
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                               ....|+.|+|||+|.   +.+.+.++|+|++||++|-+|
T Consensus       214 -----------------------------------------~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC  252 (738)
T KOG1989|consen  214 -----------------------------------------EKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC  252 (738)
T ss_pred             -----------------------------------------HhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence                                                     114689999999987   465667788888888888888


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP  375 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp  375 (400)
                      ..-.         ||... ...    .|+.+ ...++...+++..+.+||+.||+.||++||++.+++.+-
T Consensus       253 y~t~---------PFe~s-g~l----aIlng-~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~  308 (738)
T KOG1989|consen  253 YFTT---------PFEES-GKL----AILNG-NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI  308 (738)
T ss_pred             HhCC---------CcCcC-cce----eEEec-cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence            7765         88772 111    23333 344444456899999999999999999999999998754

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=9.6e-34  Score=262.87  Aligned_cols=244  Identities=23%  Similarity=0.357  Sum_probs=201.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|.++.++.+.+......+++|.+....  ....+.+.+|+.++++++|+||+++++.+..++..++++||+.+++|.
T Consensus         8 lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   87 (256)
T cd08218           8 IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLY   87 (256)
T ss_pred             eccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHH
Confidence            689999999999888888889999875432  224467899999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +.+...   .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~--~~~~~~~~~~---------  156 (256)
T cd08218          88 KKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFG--IARVLNSTVE---------  156 (256)
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeecc--ceeecCcchh---------
Confidence            988642   57899999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd08218         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                    ......|++.|+|||++.+......+|.|++|+++|+|++|..       
T Consensus       157 ------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~-------  199 (256)
T cd08218         157 ------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKH-------  199 (256)
T ss_pred             ------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCC-------
Confidence                                          0011246778999999888777788999999999999999976       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                        ||.. .+..+....+..+..+..  +..++..+.++|.+||+.+|++||++.++++||||
T Consensus       200 --~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         200 --AFEA-GNMKNLVLKIIRGSYPPV--SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             --CccC-CCHHHHHHHHhcCCCCCC--cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence              7766 455666666666655444  34578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.1e-33  Score=262.36  Aligned_cols=244  Identities=23%  Similarity=0.339  Sum_probs=198.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.||.+.+......+++|.+.....  ...+.+.+|+.++++++|+|++++++.+.. +...++++||+++++|
T Consensus         8 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l   87 (257)
T cd08223           8 VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDL   87 (257)
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcH
Confidence            5889999999998887778899998764432  234568899999999999999999988764 4468999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.+..   ..+++.++..++.+++.|+.+||+.+++|+||+|+||+++.++.++|+|||  .+.......         
T Consensus        88 ~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~--~~~~~~~~~---------  156 (257)
T cd08223          88 YHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLG--IARVLENQC---------  156 (257)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEeccc--ceEEecccC---------
Confidence            998864   258999999999999999999999999999999999999999999999999  332110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (257)
T cd08223         157 --------------------------------------------------------------------------------  156 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......|++.|+|||++.+..++..+|.|++|+++|++++|..      
T Consensus       157 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~------  200 (257)
T cd08223         157 ------------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH------  200 (257)
T ss_pred             ------------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCC------
Confidence                                          00123357889999999998877788999999999999999976      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||.. .+.......+..+..+.+  +..+++.+.+|+.+||+.||++|||+.++++||||
T Consensus       201 ---~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         201 ---AFNA-KDMNSLVYRIIEGKLPPM--PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ---CCCC-CCHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence               7765 444455555666554443  33478899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.1e-33  Score=266.99  Aligned_cols=249  Identities=24%  Similarity=0.362  Sum_probs=199.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc-CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA-QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.++++.+......+++|.+... .....+.+.+|+.++++++|+||+++++.+..++..++++||+++++|..
T Consensus         9 ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   88 (286)
T cd06622           9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDK   88 (286)
T ss_pred             hcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHH
Confidence            68999999999988878888888877643 22334678899999999999999999999999999999999999999998


Q ss_pred             HHhhc----CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVTET----CMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~~~----~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++...    .+++..+..++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||  .+.......         
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~---------  157 (286)
T cd06622          89 LYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFG--VSGNLVASL---------  157 (286)
T ss_pred             HHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecC--CcccccCCc---------
Confidence            88764    68999999999999999999997 599999999999999999999999999  333110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (286)
T cd06622         158 --------------------------------------------------------------------------------  157 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC------CCcccCCCCccchhhhhcCCCC
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN------KNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                      .....|++.|+|||.+....      +...+|.|++|+++|+|++|..
T Consensus       158 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~  205 (286)
T cd06622         158 --------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY  205 (286)
T ss_pred             --------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC
Confidence                                            11124566788888775432      3467899999999999999987


Q ss_pred             cccccccccCcchhhc--HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         309 WSFQPHFLIPYLFILS--CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                               ||.....  .......+..+.++.++  .+++..+.+||.+||+.+|++||+++++++||||...+..
T Consensus       206 ---------pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         206 ---------PYPPETYANIFAQLSAIVDGDPPTLP--SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             ---------CCCCcchhhHHHHHHHHhhcCCCCCC--cccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence                     8755221  22333344455444443  3488899999999999999999999999999999875543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.3e-33  Score=296.08  Aligned_cols=165  Identities=21%  Similarity=0.313  Sum_probs=136.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.|+.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++.....+|+||||+.+++|
T Consensus        12 LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L   91 (669)
T cd05610          12 ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDV   91 (669)
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCH
Confidence            689999999999988777888888875432   22346788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.||+.||.|||..+|+||||||+||+++.++.++|+|||  ++.......       ....
T Consensus        92 ~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG--ls~~~~~~~-------~~~~  162 (669)
T cd05610          92 KSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFG--LSKVTLNRE-------LNMM  162 (669)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCC--CCccccCCc-------cccc
Confidence            999875 468999999999999999999999999999999999999999999999999  554322111       1123


Q ss_pred             cccccceeeehhhccCCC
Q psy9736         157 AVASGTVYTAIESSTGME  174 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~  174 (400)
                      ...++..|.+||......
T Consensus       163 ~~~~t~~~~~pe~~~~~~  180 (669)
T cd05610         163 DILTTPSMAKPKNDYSRT  180 (669)
T ss_pred             ccccCccccCccccccCC
Confidence            456777888888665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=7.1e-34  Score=270.71  Aligned_cols=247  Identities=21%  Similarity=0.299  Sum_probs=191.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.||++.+......|++|.+.... ......+.+|+.+++.++|+||+++++++..+...++++||++ ++|.+
T Consensus        14 lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~   92 (301)
T cd07873          14 LGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQ   92 (301)
T ss_pred             eccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHH
Confidence            689999999999888777888999876443 2234567889999999999999999999999999999999996 58888


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+..  ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........           
T Consensus        93 ~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg--~~~~~~~~~~-----------  159 (301)
T cd07873          93 YLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFG--LARAKSIPTK-----------  159 (301)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCc--chhccCCCCC-----------
Confidence            7764  358899999999999999999999999999999999999999999999999  3331100000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (301)
T cd07873         160 --------------------------------------------------------------------------------  159 (301)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+++.|+|||++.+. .+...+|.|++|+++|+|++|..        
T Consensus       160 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~--------  203 (301)
T cd07873         160 ----------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRP--------  203 (301)
T ss_pred             ----------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCC--------
Confidence                                        01112457789999988754 34567899999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhC---C------------------CCCcc------hhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         317 IPYLFILSCRQALYLIATN---K------------------KPEIK------EKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~---~------------------~~~~~------~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                       ||.. .+..+....+...   .                  .+...      ...+++..+.+||.+||+.||.+|||++
T Consensus       204 -~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~  281 (301)
T cd07873         204 -LFPG-STVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE  281 (301)
T ss_pred             -CCCC-CCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence             7655 3333322222111   0                  00000      0124677899999999999999999999


Q ss_pred             HHhcCccccc
Q psy9736         370 LLLKHPFLKI  379 (400)
Q Consensus       370 ~~l~hp~~~~  379 (400)
                      |+|+||||+.
T Consensus       282 eil~h~~f~~  291 (301)
T cd07873         282 EAMKHPYFHC  291 (301)
T ss_pred             HHhcCccccc
Confidence            9999999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1e-33  Score=264.28  Aligned_cols=250  Identities=23%  Similarity=0.398  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC------cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ------QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|+|.++.+|.+.+......+++|.+....      ....+.+.+|+.++++++|+||+++++++...+..++++||+++
T Consensus         8 lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~   87 (268)
T cd06630           8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAG   87 (268)
T ss_pred             ecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCC
Confidence            689999999999888888888998876433      11346788999999999999999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++.+ ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++ .++|+|||  .+..........    
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg--~~~~~~~~~~~~----  161 (268)
T cd06630          88 GSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFG--AAARLAAKGTGA----  161 (268)
T ss_pred             CcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccc--cccccccccccC----
Confidence            999999875 4689999999999999999999999999999999999998775 59999999  333121110000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (268)
T cd06630         162 --------------------------------------------------------------------------------  161 (268)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     ........||..|+|||++.+..+...+|.|++|+++|++++|..    
T Consensus       162 -------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~----  206 (268)
T cd06630         162 -------------------------------GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKP----  206 (268)
T ss_pred             -------------------------------CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCC----
Confidence                                           001223357889999999988777788999999999999999986    


Q ss_pred             cccccCcchhh--cHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         313 PHFLIPYLFIL--SCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       313 ~~~~~P~~~~~--~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                           ||....  ........+... ..+.+  +..++..+.+++.+||+.+|++|||+.++++||||+
T Consensus       207 -----p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         207 -----PWNAEKHSNHLALIFKIASATTAPSI--PEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             -----CCCCCCCcchHHHHHHHhccCCCCCC--chhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence                 775422  223333333222 22222  334788999999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=8.4e-34  Score=264.43  Aligned_cols=246  Identities=25%  Similarity=0.409  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.||++.+......+++|.+.... ....+++.+|++++++++|+||+++++.+..+...++++||+++++|.+
T Consensus         9 ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (265)
T cd06605           9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDK   88 (265)
T ss_pred             hcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHH
Confidence            588999999999888777888888765443 2345678899999999999999999999999999999999999899999


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++..  ..+++..+..++.|++.|+.|+|+ .+++|+||+|+||+++.++.++|+|||  .+........          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g--~~~~~~~~~~----------  156 (265)
T cd06605          89 ILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFG--VSGQLVNSLA----------  156 (265)
T ss_pred             HHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecc--cchhhHHHHh----------
Confidence            9875  468999999999999999999999 899999999999999999999999999  3321110000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (265)
T cd06605         157 --------------------------------------------------------------------------------  156 (265)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                     ....++..|+|||.+.+..+...+|.|++|+++|+|++|..        
T Consensus       157 -------------------------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~--------  197 (265)
T cd06605         157 -------------------------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF--------  197 (265)
T ss_pred             -------------------------------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC--------
Confidence                                           00256778999999888877788999999999999999986        


Q ss_pred             cCcchh----hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         317 IPYLFI----LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~----~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                       ||...    ......+..+.....+.++.. .++..+.++|.+||..||++|||+.+++.||||+.
T Consensus       198 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         198 -PYPPENDPPDGIFELLQYIVNEPPPRLPSG-KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             -CCCccccccccHHHHHHHHhcCCCCCCChh-hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence             87654    234455555555554444332 27889999999999999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0596|consensus

Probab=100.00  E-value=3.1e-34  Score=276.44  Aligned_cols=266  Identities=20%  Similarity=0.277  Sum_probs=200.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+-.+||++.+..... +|+|++.....  .....+.+||.+|.+| .|.+|+++|++-..++.+|+||||= ..+|
T Consensus       369 iG~GGSSkV~kV~~s~~~i-yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL  446 (677)
T KOG0596|consen  369 IGSGGSSKVFKVLNSDKQI-YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDL  446 (677)
T ss_pred             hcCCCcceeeeeecCCCcc-hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccH
Confidence            6999999999998876554 34444444333  2346689999999999 5899999999999999999999976 6699


Q ss_pred             HHHHhhcC--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTETC--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~~~--l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ..+++.+.  .+.-.++.+..|++.++.+.|++||||.||||.|+++ -.|.+||+|||  +|.....+...-     -.
T Consensus       447 ~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFG--IA~aI~~DTTsI-----~k  518 (677)
T KOG0596|consen  447 NKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFG--IANAIQPDTTSI-----VK  518 (677)
T ss_pred             HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeec--hhcccCccccce-----ee
Confidence            99998763  4434889999999999999999999999999999998 67899999999  777555554432     12


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                      ...                                                                             
T Consensus       519 dsQ-----------------------------------------------------------------------------  521 (677)
T KOG0596|consen  519 DSQ-----------------------------------------------------------------------------  521 (677)
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            223                                                                             


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-----------CCCcccCCCCccchhhhhc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-----------NKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~d~~s~g~~~~~~~  304 (400)
                                                         +||+.||+||++..-           +.+..+|+||+|||+|+|+
T Consensus       522 -----------------------------------vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv  566 (677)
T KOG0596|consen  522 -----------------------------------VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV  566 (677)
T ss_pred             -----------------------------------cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence                                               555556666655421           1236789999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcH-HHHHHHHHhhhhhhhhhhcHHHHhcCccccc-cCC
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQ-IFQDFLDQCLEEEVETRASASLLLKHPFLKI-ARP  382 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~-~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~-~~~  382 (400)
                      .|.-         ||....+....+..|... ...++.+.--+. .+.+++..||..||++|||+.++|+|||++- .-+
T Consensus       567 Ygkt---------Pf~~~~n~~aKl~aI~~P-~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~  636 (677)
T KOG0596|consen  567 YGKT---------PFGQIINQIAKLHAITDP-NHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIP  636 (677)
T ss_pred             hcCC---------chHHHHHHHHHHHhhcCC-CccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccccc
Confidence            9986         887744455555544433 222222211111 3899999999999999999999999999997 666


Q ss_pred             CCCcchhhhhhHHHhc
Q psy9736         383 LASLTPLIMAAKEAAK  398 (400)
Q Consensus       383 ~~~l~~~~~~~~~~~~  398 (400)
                      ...+..++..+-+++.
T Consensus       637 ~~~m~~~~~~~~k~~e  652 (677)
T KOG0596|consen  637 VEQMAKLTTNEMKYVE  652 (677)
T ss_pred             chHHHHHHHHHHHhcc
Confidence            7777778777776653

>KOG0662|consensus

Probab=100.00  E-value=5.9e-34  Score=239.53  Aligned_cols=140  Identities=25%  Similarity=0.413  Sum_probs=126.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||.|.|++||++++..+.+-||+|.+..++.++  -....+||-+++.++|+|||+++++...+...-+|+||| ..+|.
T Consensus        10 igegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-dqdlk   88 (292)
T KOG0662|consen   10 IGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLK   88 (292)
T ss_pred             hcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hHHHH
Confidence            699999999999999999999999998775433  355789999999999999999999999999999999999 55898


Q ss_pred             HHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          79 DVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        79 ~~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      .++.  ++.+..+.++.++.|++.|+.|+|++++.|||+||.|++++.+|.++++|||  +++.++.
T Consensus        89 kyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfg--larafgi  153 (292)
T KOG0662|consen   89 KYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFG--LARAFGI  153 (292)
T ss_pred             HHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccc--hhhhcCC
Confidence            8887  4579999999999999999999999999999999999999999999999999  6664433

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1e-33  Score=271.19  Aligned_cols=131  Identities=23%  Similarity=0.411  Sum_probs=109.5

Q ss_pred             CCcceEEEEEecCC--CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDD--RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~--~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++..  ......|++|.+....  ....+.+|+.++++++|+||+++++++..  +...++++||++ ++
T Consensus         9 lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~   85 (317)
T cd07867           9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HD   85 (317)
T ss_pred             eccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-Cc
Confidence            68999999999974  3455778888775432  23457899999999999999999998853  467899999995 47


Q ss_pred             hHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe----cCCCceEEeccc
Q psy9736          77 LTDVVTE----------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL----GLDGSVKLSKWN  134 (400)
Q Consensus        77 L~~~i~~----------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~----~~~~~~~l~dfg  134 (400)
                      |.+++..          ..+++..++.++.|++.||.|||+.+++||||||+||++    +..+.++|+|||
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            7776641          147889999999999999999999999999999999999    566899999999

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1e-33  Score=266.94  Aligned_cols=245  Identities=22%  Similarity=0.299  Sum_probs=189.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||.|.++.||++.+......|++|.+.....  ...+.+.+|+.++++++|+||+++++++..+...++|+||++ ++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~   86 (285)
T cd07861           8 IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLK   86 (285)
T ss_pred             ecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHH
Confidence            6889999999998887788899998764432  234668899999999999999999999999999999999996 5888


Q ss_pred             HHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +++..    ..+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+........        
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~--------  156 (285)
T cd07861          87 KYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFG--LARAFGIPVR--------  156 (285)
T ss_pred             HHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECccc--ceeecCCCcc--------
Confidence            77753    358999999999999999999999999999999999999999999999999  3321100000        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (285)
T cd07861         157 --------------------------------------------------------------------------------  156 (285)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     ......+++.|+|||++.+. .+...+|.|++|+++|+|++|..     
T Consensus       157 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~-----  200 (285)
T cd07861         157 -------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKP-----  200 (285)
T ss_pred             -------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCC-----
Confidence                                           01122467789999988654 34578999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCC-------------------------CCCc-chhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNK-------------------------KPEI-KEKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~-------------------------~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                          ||.. .+.......+....                         ...+ .....+++.+.+||++||..||++|||
T Consensus       201 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt  275 (285)
T cd07861         201 ----LFHG-DSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS  275 (285)
T ss_pred             ----CCCC-CCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC
Confidence                6654 22222222221110                         0000 001236778999999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      +.++++||||
T Consensus       276 ~~~ll~~~~~  285 (285)
T cd07861         276 AKKALNHPYF  285 (285)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.3e-33  Score=265.95  Aligned_cols=244  Identities=30%  Similarity=0.510  Sum_probs=194.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEe------CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLV------GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~------~~~~~lv~e~~~   73 (400)
                      +|.|.++.+|++.+......+++|....... ....+..|+.+++++ +|+||+++++++..      +...+++|||++
T Consensus        24 lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~  102 (282)
T cd06636          24 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCG  102 (282)
T ss_pred             eccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCC
Confidence            5899999999999888888899998754432 345688899999998 79999999998853      457899999999


Q ss_pred             CCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          74 GGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        74 ~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++|.+++..   ..+++..++.++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+........    
T Consensus       103 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg--~~~~~~~~~~----  176 (282)
T cd06636         103 AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFG--VSAQLDRTVG----  176 (282)
T ss_pred             CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCc--chhhhhcccc----
Confidence            9999998875   258888899999999999999999999999999999999999999999999  3331110000    


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (282)
T cd06636         177 --------------------------------------------------------------------------------  176 (282)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcC
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                         ......|++.|+|||++.     +..+...+|.|++|+++|||++
T Consensus       177 -----------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~  221 (282)
T cd06636         177 -----------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE  221 (282)
T ss_pred             -----------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh
Confidence                                               012235778899999876     2344567899999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      |..         ||.. ..+......+.....+.+. ..+++..+.+||++||..||.+|||+.++++||||
T Consensus       222 g~~---------p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         222 GAP---------PLCD-MHPMRALFLIPRNPPPKLK-SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CCC---------Cccc-cCHHhhhhhHhhCCCCCCc-ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            986         8766 4455555545444333332 33578899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-34  Score=267.10  Aligned_cols=260  Identities=31%  Similarity=0.476  Sum_probs=205.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCC---CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENK---HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|.++.+|++.+......+++|.+.... ....+.+.+|+.+++.++   |+|++++++++..+...++++||+++++
T Consensus         9 l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~   88 (277)
T cd06917           9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGS   88 (277)
T ss_pred             eeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCc
Confidence            588999999998887777788888775442 234567889999999986   9999999999999899999999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      |.+++..+.+++..+..++.|++.|+.|||+.+++|+||+|+||+++..+.++++|||  .+........          
T Consensus        89 L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg--~~~~~~~~~~----------  156 (277)
T cd06917          89 VRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFG--VAALLNQNSS----------  156 (277)
T ss_pred             HHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCC--ceeecCCCcc----------
Confidence            9999988789999999999999999999999999999999999999999999999999  3331111000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (277)
T cd06917         157 --------------------------------------------------------------------------------  156 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......|+..|+|||.+.+ ..+...+|.|++|+++|+|++|..       
T Consensus       157 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~-------  200 (277)
T cd06917         157 -----------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNP-------  200 (277)
T ss_pred             -----------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCC-------
Confidence                                         0112257778999998764 334578999999999999999976       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC--CCCcchhhhh
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP--LASLTPLIMA  392 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~--~~~l~~~~~~  392 (400)
                        ||.. .........+....++.+.. ..++..+.+++.+||+.||++||++.+++.||||++...  ...+..+|..
T Consensus       201 --p~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~~~~~~~~~~~~  275 (277)
T cd06917         201 --PYSD-VDAFRAMMLIPKSKPPRLED-NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKTPVSILKELISR  275 (277)
T ss_pred             --CCCC-CChhhhhhccccCCCCCCCc-ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccCchhhHHHHHHh
Confidence              7765 44444444444443343332 237789999999999999999999999999999987443  4455555543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.9e-34  Score=299.73  Aligned_cols=248  Identities=23%  Similarity=0.352  Sum_probs=195.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......+++|.+....  ....+.+..|+.++++++|+||++++++|..  ...+|+||||+++++
T Consensus        21 LG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGS  100 (1021)
T PTZ00266         21 IGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGD  100 (1021)
T ss_pred             EecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCc
Confidence            689999999999998888888888876442  2345678899999999999999999998864  357999999999999


Q ss_pred             hHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC-------CeecCCCCCCceEecCC-----------------Cc
Q psy9736          77 LTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSN-------QVIHRDIKSDNILLGLD-----------------GS  127 (400)
Q Consensus        77 L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~-------~ivH~dikp~nil~~~~-----------------~~  127 (400)
                      |.+++..     ..+++..++.++.||+.||.|||+.       +|+|+||||+||+++..                 +.
T Consensus       101 L~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~i  180 (1021)
T PTZ00266        101 LSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPI  180 (1021)
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCc
Confidence            9998864     3689999999999999999999984       49999999999999642                 34


Q ss_pred             eEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccc
Q psy9736         128 VKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEE  207 (400)
Q Consensus       128 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (400)
                      ++|+|||  ++......                                                               
T Consensus       181 VKLsDFG--lAr~l~~~---------------------------------------------------------------  195 (1021)
T PTZ00266        181 AKIGDFG--LSKNIGIE---------------------------------------------------------------  195 (1021)
T ss_pred             eEEccCC--cccccccc---------------------------------------------------------------
Confidence            7888888  33211000                                                               


Q ss_pred             cceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--C
Q psy9736         208 LWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--K  285 (400)
Q Consensus       208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~  285 (400)
                                                                               .......||+.|+|||++..  .
T Consensus       196 ---------------------------------------------------------s~~~s~vGTp~YmAPEvL~ge~~  218 (1021)
T PTZ00266        196 ---------------------------------------------------------SMAHSCVGTPYYWSPELLLHETK  218 (1021)
T ss_pred             ---------------------------------------------------------ccccccCCCccccCHHHHhccCC
Confidence                                                                     00123368999999999864  3


Q ss_pred             CCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhh
Q psy9736         286 NKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       286 ~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  365 (400)
                      .+...+|+||+||++|||++|..         ||....+....+..+....  .++ ....+..+.+||..||..+|++|
T Consensus       219 ~~s~KSDVWSLG~ILYELLTGk~---------PF~~~~~~~qli~~lk~~p--~lp-i~~~S~eL~dLI~~~L~~dPeeR  286 (1021)
T PTZ00266        219 SYDDKSDMWALGCIIYELCSGKT---------PFHKANNFSQLISELKRGP--DLP-IKGKSKELNILIKNLLNLSAKER  286 (1021)
T ss_pred             CCCchhHHHHHHHHHHHHHHCCC---------CCCcCCcHHHHHHHHhcCC--CCC-cCCCCHHHHHHHHHHhcCChhHC
Confidence            45578999999999999999987         8877444444433333332  222 12357789999999999999999


Q ss_pred             hcHHHHhcCccccccCC
Q psy9736         366 ASASLLLKHPFLKIARP  382 (400)
Q Consensus       366 ~s~~~~l~hp~~~~~~~  382 (400)
                      |++.++|.||||+...+
T Consensus       287 PSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        287 PSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             cCHHHHhccHHHhhcCC
Confidence            99999999999986544

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.1e-33  Score=267.25  Aligned_cols=260  Identities=30%  Similarity=0.492  Sum_probs=210.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+++.+|.+.+......|++|.+.....   ...+.+.+|+.+++.++|+|++++++++..+...|+++||+. +++
T Consensus        29 lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l  107 (313)
T cd06633          29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSA  107 (313)
T ss_pred             eccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCH
Confidence            5899999999998888888889888764322   233568899999999999999999999999999999999995 477


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+.+..  ..+++..+..++.|++.++.|||+.+++|+||+|+||+++.++.++|+|||  .+...      .       
T Consensus       108 ~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg--~~~~~------~-------  172 (313)
T cd06633         108 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG--SASKS------S-------  172 (313)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecC--CCccc------C-------
Confidence            777654  368999999999999999999999999999999999999999999999999  22200      0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (313)
T cd06633         173 --------------------------------------------------------------------------------  172 (313)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    ..+...|+..|+|||++.   ...+...+|.|++|+++|+|++|..    
T Consensus       173 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~----  218 (313)
T cd06633         173 ------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----  218 (313)
T ss_pred             ------------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCC----
Confidence                                          011235677899999874   2344567899999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||.. .+.......+.....+.... ..++..+.+|+.+||+++|++||++.++++||||...++.+-+.+.+.+
T Consensus       219 -----p~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~~~~~~~~~~~~  291 (313)
T cd06633         219 -----PLFN-MNAMSALYHIAQNDSPTLQS-NEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDRPARVLIDLIQR  291 (313)
T ss_pred             -----CCCC-CChHHHHHHHHhcCCCCCCc-cccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCchhHHHHHHHHH
Confidence                 7776 56666666666655544432 3467789999999999999999999999999999998887777777776


Q ss_pred             hHHHh
Q psy9736         393 AKEAA  397 (400)
Q Consensus       393 ~~~~~  397 (400)
                      .++..
T Consensus       292 ~~~~~  296 (313)
T cd06633         292 TKDAV  296 (313)
T ss_pred             HHHHH
Confidence            65543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.1e-33  Score=262.48  Aligned_cols=248  Identities=24%  Similarity=0.392  Sum_probs=193.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-----cchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~   73 (400)
                      +|.|+++.+|.+.+...+..+++|.+....     ....+.+.+|+.+++.++|+||+++++++..  +...++++||++
T Consensus        10 lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~   89 (266)
T cd06651          10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMP   89 (266)
T ss_pred             ecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCC
Confidence            589999999999887777788888765332     1234568899999999999999999998875  357889999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+.+.. ..+++..++.++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+..........    
T Consensus        90 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~~----  163 (266)
T cd06651          90 GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG--ASKRLQTICMSG----  163 (266)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCC--CccccccccccC----
Confidence            9999998875 368999999999999999999999999999999999999999999999999  333111000000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (266)
T cd06651         164 --------------------------------------------------------------------------------  163 (266)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......++..|+|||.+.+..++..+|.|++|+++||+++|..    
T Consensus       164 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~----  207 (266)
T cd06651         164 --------------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP----  207 (266)
T ss_pred             --------------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC----
Confidence                                            00112357788999999988777788999999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                           ||..................+.+  +..+++.+.+|| +||..+|++||+++|+++||||+
T Consensus       208 -----pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         208 -----PWAEYEAMAAIFKIATQPTNPQL--PSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             -----CccccchHHHHHHHhcCCCCCCC--chhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence                 88763333333322222223333  334677889999 67778999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.2e-33  Score=266.56  Aligned_cols=245  Identities=31%  Similarity=0.455  Sum_probs=194.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeE-----eCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYL-----VGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~-----~~~~~~lv~e~~~~   74 (400)
                      ||+|.++.|+++.+......+++|...... ...+.+.+|+.+++.+ +|+||+++++++.     .+...+++|||+++
T Consensus        26 lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~  104 (286)
T cd06638          26 IGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNG  104 (286)
T ss_pred             eccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCC
Confidence            689999999999888888888888765332 2346688999999999 7999999999874     34578999999999


Q ss_pred             CChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++..     ..+++..+..++.|++.|+.|||+.+++|+|+||+||+++.++.++++|||  .+.......    
T Consensus       105 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg--~~~~~~~~~----  178 (286)
T cd06638         105 GSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG--VSAQLTSTR----  178 (286)
T ss_pred             CCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC--ceeecccCC----
Confidence            999987752     358889999999999999999999999999999999999999999999999  332110000    


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (286)
T cd06638         179 --------------------------------------------------------------------------------  178 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                         .......|++.|+|||++..     ..+...+|.|++|+++|||+
T Consensus       179 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~  223 (286)
T cd06638         179 -----------------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG  223 (286)
T ss_pred             -----------------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh
Confidence                                               00112257788999998753     33457899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      +|..         ||.. .++......+.....+.+..+..++..+.+||.+||+.||++|||+.++++|+||
T Consensus       224 ~g~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         224 DGDP---------PLAD-LHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cCCC---------CCCC-CchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            9986         7766 4555555555454444444445567889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=2.1e-33  Score=262.64  Aligned_cols=245  Identities=29%  Similarity=0.428  Sum_probs=194.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.||++.+......|++|.+........+.+.+|+.+++.++|+||+++++++..+...++++||+++++|.++
T Consensus        16 lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (268)
T cd06624          16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSAL   95 (268)
T ss_pred             EecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHH
Confidence            58999999999988877788999987655555567889999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CC--CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          81 VTET--CM--DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        81 i~~~--~l--~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +...  .+  ++..+..++.|++.|+.|||+.+++|+||||+||+++. .+.++|+|||  .+.......          
T Consensus        96 l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg--~~~~~~~~~----------  163 (268)
T cd06624          96 LRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFG--TSKRLAGIN----------  163 (268)
T ss_pred             HHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecch--hheecccCC----------
Confidence            8753  45  78889999999999999999999999999999999986 6799999999  332110000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (268)
T cd06624         164 --------------------------------------------------------------------------------  163 (268)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                   .......|++.|+|||++....  +...+|.|++|+++|+|++|..     
T Consensus       164 -----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~-----  209 (268)
T cd06624         164 -----------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKP-----  209 (268)
T ss_pred             -----------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCC-----
Confidence                                         0011124678899999886543  4578999999999999999976     


Q ss_pred             ccccCcchhhcHHHHHHHHH-hCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         314 HFLIPYLFILSCRQALYLIA-TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~-~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                          ||............+. ....+.+  +..++..+.+|+++||+.+|++|||+.+++.||||
T Consensus       210 ----p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         210 ----PFIELGEPQAAMFKVGMFKIHPEI--PESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ----CCccccChhhhHhhhhhhccCCCC--CcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence                7765333333333221 1222233  23467789999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-33  Score=266.13  Aligned_cols=235  Identities=12%  Similarity=0.100  Sum_probs=188.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch---HHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK---KELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~---~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~   73 (400)
                      +|.|+++.|+++..  .+..||+|.+.......   .+.+.+|+.++++++|+||+++++++..    ....+++|||++
T Consensus        28 i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         28 IKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             EeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            46788888888765  45678888876543322   4667899999999999999999999876    347899999999


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +|+|.+++... .+++.....++.+++.|+.|||+. +++||||||+||+++.++.++|+|||  ++......       
T Consensus       106 ~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg--~~~~~~~~-------  176 (283)
T PHA02988        106 RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHG--LEKILSSP-------  176 (283)
T ss_pred             CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccc--hHhhhccc-------
Confidence            99999998754 688899999999999999999985 89999999999999999999999999  44311100       


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (283)
T PHA02988        177 --------------------------------------------------------------------------------  176 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         .....||..|+|||++.+  ..++..+|.||+|+++|||++|.. 
T Consensus       177 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~-  220 (283)
T PHA02988        177 -----------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKI-  220 (283)
T ss_pred             -----------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCC-
Confidence                                               011246778999998876  566689999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                              ||.. .+..+....+..+ ..+.+  +...+..+.+|+.+||+.||++|||++++++
T Consensus       221 --------Pf~~-~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        221 --------PFEN-LTTKEIYDLIINKNNSLKL--PLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             --------CCCC-CCHHHHHHHHHhcCCCCCC--CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                    8876 5556666555444 23332  3347889999999999999999999999985

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.7e-33  Score=259.89  Aligned_cols=244  Identities=22%  Similarity=0.328  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.++.+++......+++|.+....  .....++.+|+.++++++|+||+++++++......++++||+++++|.
T Consensus         8 ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~   87 (256)
T cd08221           8 LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLY   87 (256)
T ss_pred             ecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHH
Confidence            588999999999888888889999876442  334566889999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +++...   .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~--~~~~~~~~~~---------  156 (256)
T cd08221          88 DKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFG--ISKILGSEYS---------  156 (256)
T ss_pred             HHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCc--ceEEcccccc---------
Confidence            998753   58999999999999999999999999999999999999999999999999  3321100000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd08221         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                    ......|++.|+|||++.+..+...+|.|++|+++|||++|..       
T Consensus       157 ------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~-------  199 (256)
T cd08221         157 ------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR-------  199 (256)
T ss_pred             ------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCC-------
Confidence                                          0122357889999999988777778999999999999999976       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                        ||.. .+..+....+..+..+...  ..++..+.++|.+||..+|++||++.++++|||+
T Consensus       200 --~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         200 --TFDA-TNPLNLVVKIVQGNYTPVV--SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             --CCCC-CCHHHHHHHHHcCCCCCCc--cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence              7755 5566666666665444332  4467889999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0604|consensus

Probab=100.00  E-value=5.6e-34  Score=256.66  Aligned_cols=244  Identities=19%  Similarity=0.249  Sum_probs=197.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeC----CEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVG----EELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~----~~~~lv~e~~~~~   75 (400)
                      ||.|.-++|..+..+++..|.|+|++.     +....++|+++--.. .|+|||+++++|.+.    .-+.+|||.++||
T Consensus        70 LG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGG  144 (400)
T KOG0604|consen   70 LGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGG  144 (400)
T ss_pred             hccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccch
Confidence            688888889888888999999999873     334467898876554 799999999998863    3577899999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhh
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .|+..|+.+   .|++..+..|+.||..|+.|||+.+|.|||+||+|++...   +..+||+|||  .|..    ...  
T Consensus       145 eLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG--FAK~----t~~--  216 (400)
T KOG0604|consen  145 ELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG--FAKE----TQE--  216 (400)
T ss_pred             HHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc--cccc----cCC--
Confidence            999999854   5999999999999999999999999999999999999965   4678999999  4441    110  


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       217 --------------------------------------------------------------------------------  216 (400)
T KOG0604|consen  217 --------------------------------------------------------------------------------  216 (400)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                        .....+.|-||.|+|||++...+|...-|+||+|++||=||+|-= 
T Consensus       217 ----------------------------------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyP-  261 (400)
T KOG0604|consen  217 ----------------------------------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP-  261 (400)
T ss_pred             ----------------------------------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCC-
Confidence                                              011344588999999999999988888899999999999999943 


Q ss_pred             ccccccccCcchhh---cHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFIL---SCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~---~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||+.--   -+.....+|..++- ..-++|..+|+.++|+|+.+|..+|.+|.|++++++|||+...
T Consensus       262 --------PFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  262 --------PFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             --------cccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence                    777621   12344445555532 2334578899999999999999999999999999999999963

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.6e-33  Score=264.12  Aligned_cols=247  Identities=21%  Similarity=0.304  Sum_probs=193.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.++++.+...+..|++|.+....  ....+.+.+|+.++++++|+||+++++++..+...++|+||+ +++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~   86 (286)
T cd07832           8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLS   86 (286)
T ss_pred             cccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHH
Confidence            688999999999887777888888876543  233567899999999999999999999999999999999999 99999


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..  ..+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+........          
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg--~~~~~~~~~~----------  154 (286)
T cd07832          87 EVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFG--LARLFSEEEP----------  154 (286)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeee--ecccccCCCC----------
Confidence            98864  468999999999999999999999999999999999999999999999999  3321110000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (286)
T cd07832         155 --------------------------------------------------------------------------------  154 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......|+..|+|||++.+.. +...+|.|++|+++|||++|.-       
T Consensus       155 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~-------  199 (286)
T cd07832         155 ----------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSP-------  199 (286)
T ss_pred             ----------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCc-------
Confidence                                        0012235788999999987643 3578999999999999999943       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCC-C-----------------------C--cc-hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         316 LIPYLFILSCRQALYLIATNKK-P-----------------------E--IK-EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~-~-----------------------~--~~-~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                        ||.. .+....+..+..... +                       .  +. ...+.+..+.+||++||..||++|||+
T Consensus       200 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  276 (286)
T cd07832         200 --LFPG-ENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA  276 (286)
T ss_pred             --CcCC-CCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCH
Confidence              3433 444444433332100 0                       0  00 002346789999999999999999999


Q ss_pred             HHHhcCcccc
Q psy9736         369 SLLLKHPFLK  378 (400)
Q Consensus       369 ~~~l~hp~~~  378 (400)
                      +++++||||.
T Consensus       277 ~~~l~h~~~~  286 (286)
T cd07832         277 AEALRHPYFT  286 (286)
T ss_pred             HHHhhCcCcC
Confidence            9999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.9e-33  Score=260.04  Aligned_cols=256  Identities=25%  Similarity=0.353  Sum_probs=204.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+++.+|.+.+...+.++++|.+.....   ...+.+.+|+.++++++|+||+++++.+..+...|+++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999888888899998764432   3456788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+..........        
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg--~~~~~~~~~~~~--------  150 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFG--LSKVGLVRRQIN--------  150 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecc--cchhcccCcccc--------
Confidence            999875 478999999999999999999999999999999999999999999999999  333111000000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                       .              
T Consensus       151 -----------------------------------------------------------------~--------------  151 (265)
T cd05579         151 -----------------------------------------------------------------L--------------  151 (265)
T ss_pred             -----------------------------------------------------------------c--------------
Confidence                                                                             0              


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                              ...........++..|+|||++.+......+|.|++|+++|++++|..        
T Consensus       152 ------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~--------  199 (265)
T cd05579         152 ------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIP--------  199 (265)
T ss_pred             ------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCC--------
Confidence                                    000001223457788999999988777788999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH---HHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA---SLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~---~~~l~hp~~~~~  380 (400)
                       ||.. .........+..+..+ .+....++..+.+|+++||+.+|++|||+   .++|+||||++.
T Consensus       200 -p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         200 -PFHG-ETPEEIFQNILNGKIE-WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             -CCCC-CCHHHHHHHHhcCCcC-CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence             7765 4555555555554322 22222347899999999999999999999   999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=2.3e-33  Score=268.62  Aligned_cols=264  Identities=26%  Similarity=0.367  Sum_probs=194.3

Q ss_pred             eEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHh
Q psy9736           5 VTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT   82 (400)
Q Consensus         5 ~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~   82 (400)
                      ..+.++.+++......||+|.+...  .....+.+.+|+.+++.++|+||+++++++..+...++++||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            3344455555556778888887654  23345678999999999999999999999999999999999999999999887


Q ss_pred             hc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          83 ET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        83 ~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ..   .+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++++|||  .+..........           
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~--~~~~~~~~~~~~-----------  158 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLR--YSVSMIKHGKRQ-----------  158 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCc--cceeeccccccc-----------
Confidence            52   58899999999999999999999999999999999999999999999999  332111000000           


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                    ...               
T Consensus       159 --------------------------------------------------------------~~~---------------  161 (314)
T cd08216         159 --------------------------------------------------------------RVV---------------  161 (314)
T ss_pred             --------------------------------------------------------------ccc---------------
Confidence                                                                          000               


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC--CCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK--NKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                              ........++..|+|||++...  .+...+|.||+|+++|||++|..         
T Consensus       162 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~---------  208 (314)
T cd08216         162 ------------------------HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHV---------  208 (314)
T ss_pred             ------------------------ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCC---------
Confidence                                    0001223567789999998763  45578999999999999999976         


Q ss_pred             CcchhhcHHHHHHHHHhCCC------------------------------CCcchhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         318 PYLFILSCRQALYLIATNKK------------------------------PEIKEKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~------------------------------~~~~~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                      ||............+....+                              ........++..+.+|+++||..||++|||
T Consensus       209 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt  288 (314)
T cd08216         209 PFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS  288 (314)
T ss_pred             CCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC
Confidence            88764333322222211100                              001112235567899999999999999999


Q ss_pred             HHHHhcCccccccCC-CCCcchhhh
Q psy9736         368 ASLLLKHPFLKIARP-LASLTPLIM  391 (400)
Q Consensus       368 ~~~~l~hp~~~~~~~-~~~l~~~~~  391 (400)
                      +.++|+||||+..+. +.+|.++|.
T Consensus       289 ~~~ll~~p~~~~~~~~~~~~~~~~~  313 (314)
T cd08216         289 ASQLLNHSFFKQCKRRNTSLLDLLK  313 (314)
T ss_pred             HHHHhcCchHhhhcccchhHHHhhC
Confidence            999999999998543 556666653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0671|consensus

Probab=100.00  E-value=6.9e-34  Score=263.83  Aligned_cols=266  Identities=19%  Similarity=0.171  Sum_probs=191.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCC------CcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHP------NIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~------niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|.|++|..+-++.....||+|+++.- ...++..+-||++|+++.+.      -++.+.++|.-.++.|+|+|.+ |
T Consensus        97 lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G  174 (415)
T KOG0671|consen   97 LGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-G  174 (415)
T ss_pred             hcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-C
Confidence            69999999999999999999999998643 34678888999999998321      3677778898899999999999 7


Q ss_pred             CChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          75 GSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        75 ~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .++++++.++   +++..+++.+..|++.++.|||+.+++|-|+||+||++.+....++.+-+  ..   ....      
T Consensus       175 ~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k--~~---~~~~------  243 (415)
T KOG0671|consen  175 LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPK--KK---VCFI------  243 (415)
T ss_pred             hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccC--Cc---ccee------
Confidence            7999999875   69999999999999999999999999999999999999554433333222  00   0000      


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       244 --------------------------------------------------------------------------------  243 (415)
T KOG0671|consen  244 --------------------------------------------------------------------------------  243 (415)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                -+.....++.-|||.+.-..+.   +++.+.|.+|+|||++.+..|+...|+||.|||++|+++|+.   
T Consensus       244 ----------r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~---  307 (415)
T KOG0671|consen  244 ----------RPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGET---  307 (415)
T ss_pred             ----------ccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccce---
Confidence                      0000111222233333222222   356688999999999999999999999999999999999986   


Q ss_pred             ccccccCcchhhc--HHHHHHHHHhCCC--------------------CCcchh--------------------hhhcHH
Q psy9736         312 QPHFLIPYLFILS--CRQALYLIATNKK--------------------PEIKEK--------------------EKLSQI  349 (400)
Q Consensus       312 g~~~~~P~~~~~~--~~~~~~~i~~~~~--------------------~~~~~~--------------------~~~s~~  349 (400)
                            -|+..++  .+..+..|+..-|                    +.....                    ......
T Consensus       308 ------LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~  381 (415)
T KOG0671|consen  308 ------LFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQ  381 (415)
T ss_pred             ------ecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhH
Confidence                  4444332  1222222222100                    000000                    001125


Q ss_pred             HHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         350 FQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       350 ~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      +.|||++||.+||++|+|+.|||.||||+.-+
T Consensus       382 LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  382 LFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             HHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            88999999999999999999999999998644

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.5e-33  Score=263.73  Aligned_cols=246  Identities=19%  Similarity=0.253  Sum_probs=193.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|+|+.||.+.+......+++|.+...   .....+.+.+|+.+++.++|+||+++++++..++..|+++||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999877766777777766432   122345677899999999999999999999999999999999999999


Q ss_pred             HHHHhh-c--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE-T--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~-~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+++.. .  .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+.......         
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg--~~~~~~~~~---------  149 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLG--LAVELKGGK---------  149 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCc--chhhhccCC---------
Confidence            988864 3  58999999999999999999999999999999999999999999999999  333111100         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (277)
T cd05577         150 --------------------------------------------------------------------------------  149 (277)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ......++..|+|||++.+..+...+|.|++|+++|+|++|..      
T Consensus       150 -------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~------  192 (277)
T cd05577         150 -------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRS------  192 (277)
T ss_pred             -------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCC------
Confidence                                           0111246678999999888777788999999999999999987      


Q ss_pred             cccCcchhhc--HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         315 FLIPYLFILS--CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                         ||.....  ....+.......+..+  +..+++.+.++|++||+.||++||     ++.++++||||+.
T Consensus       193 ---p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         193 ---PFRQRKEKVEKEELKRRTLEMAVEY--PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             ---CCCCCcccccHHHHHhccccccccC--CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence               8755322  1122222122222222  334688999999999999999999     8999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.9e-33  Score=262.14  Aligned_cols=248  Identities=25%  Similarity=0.407  Sum_probs=194.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc----------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~----------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      +|.|.++.||++.+...+..|++|.+.....          ...+.+.+|+.+++.++|+|++++++++......++|+|
T Consensus         9 lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   88 (272)
T cd06629           9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLE   88 (272)
T ss_pred             ecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEe
Confidence            6899999999998877777888887643211          112467889999999999999999999998899999999


Q ss_pred             ccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          71 YLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        71 ~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      |+++++|.+++.. +.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........   
T Consensus        89 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~--~~~~~~~~~~---  163 (272)
T cd06629          89 YVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFG--ISKKSDDIYD---  163 (272)
T ss_pred             cCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecc--cccccccccc---
Confidence            9999999998876 478999999999999999999999999999999999999999999999999  3321100000   


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (272)
T cd06629         164 --------------------------------------------------------------------------------  163 (272)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                        ........|+..|+|||++....  +...+|.|++|+++|++++|.
T Consensus       164 ----------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~  209 (272)
T cd06629         164 ----------------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR  209 (272)
T ss_pred             ----------------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCC
Confidence                                              00022345788999999887654  557899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhC-CCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATN-KKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      .         ||.. .........+... ..+.++.  ...++..+.+||.+||..||++|||++++++|||+
T Consensus       210 ~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         210 R---------PWSD-EEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             C---------CCcC-cchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            7         7765 3333333333222 1222221  12467899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=5.7e-33  Score=266.69  Aligned_cols=261  Identities=31%  Similarity=0.487  Sum_probs=211.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|+|+++.+|++.+......|++|.+....   ....+.+.+|+.+++.++|+|++++++++..+...++++||+.+ ++
T Consensus        33 lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l  111 (317)
T cd06635          33 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SA  111 (317)
T ss_pred             eccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CH
Confidence            689999999999887777888888875332   22345688999999999999999999999999999999999965 77


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+.+..  ..+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+....             
T Consensus       112 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg--~~~~~~-------------  176 (317)
T cd06635         112 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFG--SASIAS-------------  176 (317)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCC--CccccC-------------
Confidence            776643  368999999999999999999999999999999999999999999999999  222000             


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (317)
T cd06635         177 --------------------------------------------------------------------------------  176 (317)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    ......|++.|+|||.+.   .......+|.|++|+++|||++|-.    
T Consensus       177 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~----  222 (317)
T cd06635         177 ------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----  222 (317)
T ss_pred             ------------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCC----
Confidence                                          011124677899999874   2344577899999999999999975    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||.. .+.......+..+..+... ...++..+.+|+.+||+.+|.+||++.++++|+|+...++..-+.+++..
T Consensus       223 -----p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~  295 (317)
T cd06635         223 -----PLFN-MNAMSALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETVLIDLIQR  295 (317)
T ss_pred             -----CCCC-ccHHHHHHHHHhccCCCCC-CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccchhhHHHH
Confidence                 7776 5566666666665443332 23477889999999999999999999999999999998888888888888


Q ss_pred             hHHHhc
Q psy9736         393 AKEAAK  398 (400)
Q Consensus       393 ~~~~~~  398 (400)
                      .+++++
T Consensus       296 ~~~~~~  301 (317)
T cd06635         296 TKDAVR  301 (317)
T ss_pred             HHHHHH
Confidence            877765

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.1e-33  Score=266.69  Aligned_cols=254  Identities=21%  Similarity=0.258  Sum_probs=194.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-----hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-----KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-----~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.+|++.+......|++|.+......     ....+.+|+.+++.++|+||+++++++..+...++|+||+ ++
T Consensus         8 lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~   86 (298)
T cd07841           8 LGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ET   86 (298)
T ss_pred             eeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CC
Confidence            58899999999988777778888887644322     2355778999999999999999999999989999999999 88


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||  .+........       
T Consensus        87 ~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg--~~~~~~~~~~-------  157 (298)
T cd07841          87 DLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG--LARSFGSPNR-------  157 (298)
T ss_pred             CHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccce--eeeeccCCCc-------
Confidence            999999765  58999999999999999999999999999999999999999999999999  3331110000       


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (298)
T cd07841         158 --------------------------------------------------------------------------------  157 (298)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......+++.|+|||.+.+ ..+...+|.|++|+++|||++|.     
T Consensus       158 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~-----  200 (298)
T cd07841         158 --------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV-----  200 (298)
T ss_pred             --------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC-----
Confidence                                            0111235667888887754 33457899999999999999994     


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCC----------------------Ccc---hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKP----------------------EIK---EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~----------------------~~~---~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                           |+....+..+.+..+......                      ..+   .....+..+.+||.+||..||++|||
T Consensus       201 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s  275 (298)
T cd07841         201 -----PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT  275 (298)
T ss_pred             -----ccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC
Confidence                 443334444433333221000                      000   01234678999999999999999999


Q ss_pred             HHHHhcCccccccCCCCCc
Q psy9736         368 ASLLLKHPFLKIARPLASL  386 (400)
Q Consensus       368 ~~~~l~hp~~~~~~~~~~l  386 (400)
                      +.+++.||||++...+...
T Consensus       276 ~~e~l~~~~~~~~~~~~~~  294 (298)
T cd07841         276 ARQALEHPYFSNDPAPTPP  294 (298)
T ss_pred             HHHHhhCccccCCCCCCCC
Confidence            9999999999986655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0193|consensus

Probab=100.00  E-value=2.6e-34  Score=279.87  Aligned_cols=240  Identities=18%  Similarity=0.289  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|.|++|+++...-   .||+|.++....  ...+.|.+|+.++++-+|.||+-|.+++.+++. .+|+.+|+|.+|+
T Consensus       400 IGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY  475 (678)
T KOG0193|consen  400 IGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLY  475 (678)
T ss_pred             eccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhh
Confidence            7999999999988754   467777665532  356889999999999999999999999998876 9999999999999


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .++...  .|...+.+.|+.|+++|+.|||.++|||||+|..||++..++.++|+|||++.....- .-           
T Consensus       476 ~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w-~g-----------  543 (678)
T KOG0193|consen  476 THLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW-SG-----------  543 (678)
T ss_pred             hhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee-cc-----------
Confidence            998743  6899999999999999999999999999999999999999999999999933222110 00           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                       .              
T Consensus       544 -----------------------------------------------------------------~--------------  544 (678)
T KOG0193|consen  544 -----------------------------------------------------------------E--------------  544 (678)
T ss_pred             -----------------------------------------------------------------c--------------
Confidence                                                                             0              


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  ....+.-|...|||||++..   .++...+|+|++|+++|||++|+.     
T Consensus       545 ----------------------------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~l-----  591 (678)
T KOG0193|consen  545 ----------------------------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGEL-----  591 (678)
T ss_pred             ----------------------------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcC-----
Confidence                                        00222357789999999885   556678999999999999999998     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||. ..+...+++.+-+|  .+.......+...++++|+..||.+++++||...++|.
T Consensus       592 ----Pys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  592 ----PYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             ----CcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence                999 58888999888888  33333334556679999999999999999999999887

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.8e-33  Score=260.36  Aligned_cols=249  Identities=25%  Similarity=0.434  Sum_probs=207.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.++++.+...+..|++|.+..... ...+.+.+|+..++.++|+||+++++++..+...++++||+++++|.+
T Consensus         9 i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (264)
T cd06623           9 LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLAD   88 (264)
T ss_pred             eeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHH
Confidence            5889999999999988888899998765543 345778999999999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.. ..+++..+..++.|++.|+.|+|+ .+++|+||+|+||+++.++.++|+|||  .+........           
T Consensus        89 ~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~--~~~~~~~~~~-----------  155 (264)
T cd06623          89 LLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFG--ISKVLENTLD-----------  155 (264)
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCc--cceecccCCC-----------
Confidence            9975 579999999999999999999999 999999999999999999999999999  3321100000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (264)
T cd06623         156 --------------------------------------------------------------------------------  155 (264)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......++..|+|||.+....+...+|.|++|+++|+|++|..         
T Consensus       156 ----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~---------  198 (264)
T cd06623         156 ----------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKF---------  198 (264)
T ss_pred             ----------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCC---------
Confidence                                        0112356788999999988877788999999999999999987         


Q ss_pred             Ccchhh--cHHHHHHHHHhCCCCCcchhhh-hcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         318 PYLFIL--SCRQALYLIATNKKPEIKEKEK-LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       318 P~~~~~--~~~~~~~~i~~~~~~~~~~~~~-~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ||....  ...+....+.....+.+  ..+ ++..+.++|++||..+|++|||+.++++|||++...
T Consensus       199 p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~  263 (264)
T cd06623         199 PFLPPGQPSFFELMQAICDGPPPSL--PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD  263 (264)
T ss_pred             CCccccccCHHHHHHHHhcCCCCCC--CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence            876643  45555555555444443  233 788999999999999999999999999999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG4721|consensus

Probab=100.00  E-value=2e-34  Score=278.00  Aligned_cols=233  Identities=20%  Similarity=0.323  Sum_probs=196.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|..+.||+++=  -+..||+|+++.-.       ..+|..|++|+|+||+.|.++|....-+|++||||..|.|+..
T Consensus       132 lGSGaQGAVF~Grl--~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V  202 (904)
T KOG4721|consen  132 LGSGAQGAVFLGRL--HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV  202 (904)
T ss_pred             hccCcccceeeeec--cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence            68999999998754  45779999984221       3689999999999999999999988899999999999999999


Q ss_pred             Hhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          81 VTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        81 i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++.+ .++......+..+|+.|+.|||.+.|||||||.-||+|..+..+||+|||  ....+.+-.              
T Consensus       203 Lka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFG--TS~e~~~~S--------------  266 (904)
T KOG4721|consen  203 LKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFG--TSKELSDKS--------------  266 (904)
T ss_pred             HhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEecccc--chHhhhhhh--------------
Confidence            9875 78889999999999999999999999999999999999999999999999  333221111              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       267 --------------------------------------------------------------------------------  266 (904)
T KOG4721|consen  267 --------------------------------------------------------------------------------  266 (904)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                                ..-.++||+.|||||+|.+.+...+.|+||+|+|++|||||.+         ||
T Consensus       267 --------------------------TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~Ei---------PY  311 (904)
T KOG4721|consen  267 --------------------------TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEI---------PY  311 (904)
T ss_pred             --------------------------hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCC---------Cc
Confidence                                      1224689999999999999999999999999999999999999         98


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCc
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP  375 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp  375 (400)
                      -+ .+...+++-+-.+ .-.++-|...+..++-||++||...|..||+.+++|.|=
T Consensus       312 kd-VdssAIIwGVGsN-sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  312 KD-VDSSAIIWGVGSN-SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             cc-cchheeEEeccCC-cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            87 4445554444333 123444566788999999999999999999999999994

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=5.3e-33  Score=257.54  Aligned_cols=243  Identities=23%  Similarity=0.346  Sum_probs=197.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|.+.+......+++|.+....  ....+.+.+|+.++++++|+|++++++.+..++..++++||+++++|.
T Consensus         8 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (256)
T cd08220           8 VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLA   87 (256)
T ss_pred             ecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHH
Confidence            588999999998887778888888876442  234567889999999999999999999999899999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +++...   .+++..++.++.+++.++.|||+++++|+||+|+||+++.+ +.++++|||  .+.......         
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~--~~~~~~~~~---------  156 (256)
T cd08220          88 EYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFG--ISKILSSKS---------  156 (256)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCC--CceecCCCc---------
Confidence            998753   48999999999999999999999999999999999999865 467999999  332110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd08220         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ......|+..|+|||++........+|.|++|+++|+|++|..      
T Consensus       157 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~------  199 (256)
T cd08220         157 -------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKR------  199 (256)
T ss_pred             -------------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCC------
Confidence                                           0112356788999999988777788999999999999999976      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||.. .+.......+.......+  +..++..+.+++.+||..||++|||+.++++||||
T Consensus       200 ---~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         200 ---AFEA-ANLPALVLKIMSGTFAPI--SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             ---Cccc-CchHHHHHHHHhcCCCCC--CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence               7766 444455555555544333  33478899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=3.2e-33  Score=263.42  Aligned_cols=246  Identities=23%  Similarity=0.318  Sum_probs=190.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|++.+......|++|......  ....+.+.+|+.++++++|+|++++++++..+...++++||++++++.
T Consensus         9 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   88 (286)
T cd07847           9 IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLN   88 (286)
T ss_pred             ecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHH
Confidence            588999999999887777788888765332  123456789999999999999999999999999999999999988887


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+... ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........           
T Consensus        89 ~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~-----------  155 (286)
T cd07847          89 ELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFG--FARILTGPGD-----------  155 (286)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccc--cceecCCCcc-----------
Confidence            77654 368999999999999999999999999999999999999999999999999  3331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (286)
T cd07847         156 --------------------------------------------------------------------------------  155 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++.+ ..+...+|.|++|+++|+|++|..        
T Consensus       156 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~--------  199 (286)
T cd07847         156 ----------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQP--------  199 (286)
T ss_pred             ----------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCC--------
Confidence                                        0112245678899998765 345578999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCC------------------Ccc----------hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         317 IPYLFILSCRQALYLIATNKKP------------------EIK----------EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~------------------~~~----------~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                       ||.. .+..+....+.+....                  ..+          ...+++..+.+||.+||+.||++|||+
T Consensus       200 -p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  277 (286)
T cd07847         200 -LWPG-KSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSC  277 (286)
T ss_pred             -CCCC-CChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCH
Confidence             7765 3333444333221000                  000          012457789999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      .+++.||||
T Consensus       278 ~eil~~~~f  286 (286)
T cd07847         278 EELLEHPYF  286 (286)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=5.4e-33  Score=255.73  Aligned_cols=244  Identities=41%  Similarity=0.644  Sum_probs=202.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.++.+.+......+++|..........+.+.+|+.++++++|+|++++++.+..+...++++||+++++|.++
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   87 (253)
T cd05122           8 IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDL   87 (253)
T ss_pred             eccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHH
Confidence            58899999999988877788999988765544567789999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++|+|||  .+........            
T Consensus        88 ~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~--~~~~~~~~~~------------  153 (253)
T cd05122          88 LKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFG--LSAQLSDTKA------------  153 (253)
T ss_pred             HhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecc--cccccccccc------------
Confidence            8764  78999999999999999999999999999999999999999999999999  3221110000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (253)
T cd05122         154 --------------------------------------------------------------------------------  153 (253)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                  .....|+..|+|||.+........+|.|++|+++|+|++|..         |
T Consensus       154 ----------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~---------p  196 (253)
T cd05122         154 ----------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKP---------P  196 (253)
T ss_pred             ----------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCC---------C
Confidence                                        112356778999999887776788999999999999999986         7


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                      |.. .+.......+.....+.+.....++..+.++|.+||+.||++|||+.++++|||
T Consensus       197 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         197 YSE-LPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             CCC-CchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            766 434444444444444555545445889999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=5e-33  Score=261.88  Aligned_cols=248  Identities=23%  Similarity=0.384  Sum_probs=196.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHH-HHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILV-MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|+|+.||++.+...+..||+|.+..... .....+..|+.+ ++.++|+||+++++++..++..++++||++ ++|.
T Consensus         9 ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~   87 (283)
T cd06617           9 LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLD   87 (283)
T ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHH
Confidence            6899999999999888888899998764422 233455667665 566799999999999998899999999995 5887


Q ss_pred             HHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVTE-----TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++..     ..+++..+..++.|++.|+.|||++ +++|+||||+||+++.++.++|+|||  .+.......       
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg--~~~~~~~~~-------  158 (283)
T cd06617          88 KFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFG--ISGYLVDSV-------  158 (283)
T ss_pred             HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecc--ccccccccc-------
Confidence            77653     2589999999999999999999997 99999999999999999999999999  333111000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (283)
T cd06617         159 --------------------------------------------------------------------------------  158 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec----CCCCcccCCCCccchhhhhcCCCC
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD----KNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                       ..+...|+..|+|||++.+    ..++..+|.|++|+++|+|++|..
T Consensus       159 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  205 (283)
T cd06617         159 ---------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRF  205 (283)
T ss_pred             ---------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCC
Confidence                                             0112246778889998764    334577899999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                               ||.......+.+..+..+..+.++. ..++..+.+||.+||..+|++||++.++++||||....
T Consensus       206 ---------p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         206 ---------PYDSWKTPFQQLKQVVEEPSPQLPA-EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             ---------CCCccccCHHHHHHHHhcCCCCCCc-cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence                     8865445556666666665554432 34788999999999999999999999999999999854

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=4.2e-33  Score=263.40  Aligned_cols=247  Identities=21%  Similarity=0.342  Sum_probs=197.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|+++.|+.+.+......+++|.+..... .....+.+|+.++.++. |+||+++++++..++..++++||+. .++.
T Consensus        12 lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~   90 (288)
T cd06616          12 IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLD   90 (288)
T ss_pred             hCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHH
Confidence            6899999999998888888899998764432 34566889999999985 9999999999998889999999985 4554


Q ss_pred             HHHh------hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          79 DVVT------ETCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        79 ~~i~------~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++..      ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||  ++........     
T Consensus        91 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg--~~~~~~~~~~-----  163 (288)
T cd06616          91 KFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFG--ISGQLVDSIA-----  163 (288)
T ss_pred             HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecc--hhHHhccCCc-----
Confidence            4332      24689999999999999999999975 99999999999999999999999999  4432211000     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (288)
T cd06616         164 --------------------------------------------------------------------------------  163 (288)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC---CCCcccCCCCccchhhhhcCCCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK---NKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                         .....|++.|+|||++...   .+...+|.|++|+++|+|++|..
T Consensus       164 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  208 (288)
T cd06616         164 -----------------------------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKF  208 (288)
T ss_pred             -----------------------------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCC
Confidence                                               1122467789999988765   45678999999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                               ||.......+...++..+.++.+..  +.+++..+.+||.+||+.||++|||++++++||||+.
T Consensus       209 ---------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         209 ---------PYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             ---------CchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence                     8876444555555555554444432  2347889999999999999999999999999999986

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3e-33  Score=262.06  Aligned_cols=240  Identities=20%  Similarity=0.270  Sum_probs=186.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.|+.|+.+.+......+++|.........     .|+.....+ +|+||+++++.|..++..++||||+++++|.+
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~   98 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD   98 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence            489999999999888888888888865432211     133222222 79999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++... .+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++ .++++|||  .+....    .          
T Consensus        99 ~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg--~~~~~~----~----------  162 (267)
T PHA03390         99 LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYG--LCKIIG----T----------  162 (267)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCc--cceecC----C----------
Confidence            99765 799999999999999999999999999999999999999998 99999999  332110    0          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (267)
T PHA03390        163 --------------------------------------------------------------------------------  162 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                   .....|+..|+|||++.+..+...+|.||+|+++|+|++|..         
T Consensus       163 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~---------  204 (267)
T PHA03390        163 -----------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKH---------  204 (267)
T ss_pred             -----------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCC---------
Confidence                                         011246788999999988887788999999999999999987         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-HHHHhcCccccc
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKI  379 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-~~~~l~hp~~~~  379 (400)
                      ||.......-....+..........+..++..+.+||.+||+.||.+|++ ++++|+||||++
T Consensus       205 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        205 PFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             CCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            88653221111111111111222223458889999999999999999996 599999999974

>KOG1290|consensus

Probab=100.00  E-value=5.1e-33  Score=264.58  Aligned_cols=123  Identities=24%  Similarity=0.424  Sum_probs=108.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC--------CCCcccccceeEe----CCEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK--------HPNIVNYLDSYLV----GEELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~~~~~~~~----~~~~~lv   68 (400)
                      ||||.|.+||++-|.+....||+|+++.++. ..|....||.+|+++.        ..+||++++.|..    +.++|||
T Consensus        86 LGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMV  164 (590)
T KOG1290|consen   86 LGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMV  164 (590)
T ss_pred             ccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEE
Confidence            7999999999999999999999999987765 5677889999999972        2489999999874    4599999


Q ss_pred             EeccCCCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCC
Q psy9736          69 MEYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLD  125 (400)
Q Consensus        69 ~e~~~~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~  125 (400)
                      +|++ |.+|..+|...   .++...++.|++||+.||.|||.. ||||-||||+|||+...
T Consensus       165 fEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  165 FEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             ehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            9999 77999988743   699999999999999999999976 99999999999998554

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3.2e-33  Score=259.81  Aligned_cols=244  Identities=25%  Similarity=0.318  Sum_probs=198.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+++.+|.+.+......+++|.+.....   ...+.+.+|+.++++++|+||+++++.+..+...++++||+.+++|
T Consensus         8 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   87 (258)
T cd05578           8 IGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDL   87 (258)
T ss_pred             eccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCH
Confidence            5889999999998888888888888764321   2356788999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+.+... .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .........           
T Consensus        88 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~--~~~~~~~~~-----------  154 (258)
T cd05578          88 RYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFN--IATKVTPDT-----------  154 (258)
T ss_pred             HHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecc--cccccCCCc-----------
Confidence            9999766 89999999999999999999999999999999999999999999999999  332111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (258)
T cd05578         155 --------------------------------------------------------------------------------  154 (258)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......|+..|+|||++....+...+|.|++|+++|+|++|..        
T Consensus       155 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~--------  197 (258)
T cd05578         155 -----------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR--------  197 (258)
T ss_pred             -----------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCC--------
Confidence                                         0112246778999999988777789999999999999999987        


Q ss_pred             cCcchhhc-HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH--HHHhcCccc
Q psy9736         317 IPYLFILS-CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA--SLLLKHPFL  377 (400)
Q Consensus       317 ~P~~~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~--~~~l~hp~~  377 (400)
                       ||..... ....+........+..  +..++..+.++|.+||+.||.+||++  .|+++||||
T Consensus       198 -p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         198 -PYRGHSRTIRDQIRAKQETADVLY--PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             -CCCCCCccHHHHHHHHhccccccC--cccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence             8776332 1222223333222222  34477899999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0612|consensus

Probab=100.00  E-value=1e-33  Score=291.52  Aligned_cols=249  Identities=21%  Similarity=0.245  Sum_probs=210.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.|+.|++++-..+...+|.|.++..   .+.+..-|..|-++|-.-..+.|+++.-+|+++.++|+||||++||+|
T Consensus        83 IGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDl  162 (1317)
T KOG0612|consen   83 IGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDL  162 (1317)
T ss_pred             hcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchH
Confidence            79999999999988777777777777642   233456688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++... .+++.-+++++..|+.||.-+|+.|+|||||||+||++|.+|.++|+||| .+.+ +..+-..         
T Consensus       163 ltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFG-sClk-m~~dG~V---------  231 (1317)
T KOG0612|consen  163 LTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFG-SCLK-MDADGTV---------  231 (1317)
T ss_pred             HHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccch-hHHh-cCCCCcE---------
Confidence            9999876 59999999999999999999999999999999999999999999999999 2332 2211111         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       232 --------------------------------------------------------------------------------  231 (1317)
T KOG0612|consen  232 --------------------------------------------------------------------------------  231 (1317)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                   ..+..+|||-|++||++..     ..|+.--|.||+|+.+||||.|+-   
T Consensus       232 -----------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T---  279 (1317)
T KOG0612|consen  232 -----------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET---  279 (1317)
T ss_pred             -----------------------------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC---
Confidence                                         1445689999999999883     455567799999999999999998   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                            ||+. ++-.+.+-+|+..+. -.+|+..++|..++|||++++. +|+.|..   ++++-+||||.+.
T Consensus       280 ------PFYa-dslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  280 ------PFYA-DSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             ------cchH-HHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence                  9999 888888888887632 2333345699999999999998 9999999   9999999999873

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5e-33  Score=262.18  Aligned_cols=245  Identities=23%  Similarity=0.312  Sum_probs=190.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|+++.+|++.+......|++|.+.....  ...+.+.+|++++++++|+||+++++++..++..++++||+. ++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~   86 (284)
T cd07860           8 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLK   86 (284)
T ss_pred             ecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHH
Confidence            5889999999998887788889988764432  233568899999999999999999999999999999999995 5888


Q ss_pred             HHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .++..   ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........         
T Consensus        87 ~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg--~~~~~~~~~~---------  155 (284)
T cd07860          87 KFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--LARAFGVPVR---------  155 (284)
T ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeecc--chhhcccCcc---------
Confidence            87753   368999999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (284)
T cd07860         156 --------------------------------------------------------------------------------  155 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......+++.|+|||++.+.. ....+|.|++|+++|+|++|..      
T Consensus       156 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~------  199 (284)
T cd07860         156 ------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA------  199 (284)
T ss_pred             ------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCC------
Confidence                                          011224577899999887654 3467999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCC-------------------------Ccch-hhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKP-------------------------EIKE-KEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~-------------------------~~~~-~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                         ||.. .+......++.+....                         .+.. ...++..+.++|.+||+.||++|||+
T Consensus       200 ---p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  275 (284)
T cd07860         200 ---LFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA  275 (284)
T ss_pred             ---CCCC-CCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH
Confidence               7765 2333333332221000                         0000 12356788999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      +++++||||
T Consensus       276 ~~~l~~~~f  284 (284)
T cd07860         276 KAALAHPFF  284 (284)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8.7e-33  Score=261.57  Aligned_cols=242  Identities=16%  Similarity=0.254  Sum_probs=194.2

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.|+.+..     ......+++|.+........+.+.+|+.++++++|+||+++++++..+...++++||++++
T Consensus        13 lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   92 (288)
T cd05093          13 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG   92 (288)
T ss_pred             cCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCC
Confidence            68999999998863     3345668888876555545677999999999999999999999999999999999999999


Q ss_pred             ChHHHHhhc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          76 SLTDVVTET--------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        76 ~L~~~i~~~--------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +|.+++...              .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+...
T Consensus        93 ~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg--~~~~~  170 (288)
T cd05093          93 DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG--MSRDV  170 (288)
T ss_pred             CHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCC--ccccc
Confidence            999988632              38999999999999999999999999999999999999999999999999  33311


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      .......                                                                         
T Consensus       171 ~~~~~~~-------------------------------------------------------------------------  177 (288)
T cd05093         171 YSTDYYR-------------------------------------------------------------------------  177 (288)
T ss_pred             cCCceee-------------------------------------------------------------------------
Confidence            1000000                                                                         


Q ss_pred             ccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhh
Q psy9736         222 EELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~  301 (400)
                                                                  ......+++.|+|||++.+..+...+|.||+|+++|
T Consensus       178 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~  213 (288)
T cd05093         178 --------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW  213 (288)
T ss_pred             --------------------------------------------cCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence                                                        011224567899999998887778999999999999


Q ss_pred             hhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         302 EFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       302 ~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +|++ |..         ||.. .+..+....+..+.....  +..++..+.+|+.+||+.||++|||+.++++
T Consensus       214 ~l~t~g~~---------p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         214 EIFTYGKQ---------PWYQ-LSNNEVIECITQGRVLQR--PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHHhCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9998 665         6655 455566666666654333  3347789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-33  Score=287.37  Aligned_cols=250  Identities=19%  Similarity=0.200  Sum_probs=179.8

Q ss_pred             CCcceEEEEEecCCCce-------------------eEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe
Q psy9736           1 MKRGVTIDRFSSDDRRF-------------------FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV   61 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-------------------~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~   61 (400)
                      ||+|+|++||++..+..                   ..+++.|.+... ......+.+|+.++++++|+||+++++++..
T Consensus       156 LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~  234 (501)
T PHA03210        156 LPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAG-SRAAIQLENEILALGRLNHENILKIEEILRS  234 (501)
T ss_pred             ecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcc-hHHHHHHHHHHHHHHhCCCCCcCcEeEEEEE
Confidence            68999999997643211                   112222332222 2234568899999999999999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccch
Q psy9736          62 GEELWVVMEYLPGGSLTDVVTET------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        62 ~~~~~lv~e~~~~~~L~~~i~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~  135 (400)
                      .+..+++++++ ++++.+++...      ......++.++.|++.||.|||+++|+||||||+||+++.++.++|+||| 
T Consensus       235 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFG-  312 (501)
T PHA03210        235 EANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFG-  312 (501)
T ss_pred             CCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCC-
Confidence            99999999999 45777766533      23356678899999999999999999999999999999999999999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       ++..+.....                                                                     
T Consensus       313 -la~~~~~~~~---------------------------------------------------------------------  322 (501)
T PHA03210        313 -TAMPFEKERE---------------------------------------------------------------------  322 (501)
T ss_pred             -CceecCcccc---------------------------------------------------------------------
Confidence             4431110000                                                                     


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                       .......||+.|+|||++.+..+...+|.||
T Consensus       323 -------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  353 (501)
T PHA03210        323 -------------------------------------------------AFDYGWVGTVATNSPEILAGDGYCEITDIWS  353 (501)
T ss_pred             -------------------------------------------------cccccccCCcCCCCchhhcCCCCCcHHHHHH
Confidence                                                             0012346899999999999988888999999


Q ss_pred             ccchhhhhcCCCCcccccccccCcchh-hcHHHHHHHHHhCC--------------------------CCCcc---hhhh
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFI-LSCRQALYLIATNK--------------------------KPEIK---EKEK  345 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~-~~~~~~~~~i~~~~--------------------------~~~~~---~~~~  345 (400)
                      +|+++|||++|..-        |+... .++...+.+++...                          +..++   ....
T Consensus       354 lGvil~ell~~~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  425 (501)
T PHA03210        354 CGLILLDMLSHDFC--------PIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLG  425 (501)
T ss_pred             HHHHHHHHHHCCCC--------CccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcC
Confidence            99999999998751        22111 11222222221110                          00000   1112


Q ss_pred             hcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         346 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       346 ~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ++..+.++|.+||++||++|||+.|+|+||||...
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            45678899999999999999999999999999864

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=5.7e-33  Score=261.65  Aligned_cols=243  Identities=17%  Similarity=0.253  Sum_probs=193.7

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+++.||.+...     .....|++|.+..... ...+.+.+|+.++++++|+||+++++++...+..++++||+++
T Consensus        13 lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   92 (283)
T cd05048          13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAH   92 (283)
T ss_pred             ccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCC
Confidence            688988888887533     3447789998764432 2346689999999999999999999999988899999999999


Q ss_pred             CChHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhh
Q psy9736          75 GSLTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI  137 (400)
Q Consensus        75 ~~L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~  137 (400)
                      ++|.+++..                 ..+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  +
T Consensus        93 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg--~  170 (283)
T cd05048          93 GDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFG--L  170 (283)
T ss_pred             CcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCc--c
Confidence            999998864                 247788999999999999999999999999999999999999999999999  3


Q ss_pred             hhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccc
Q psy9736         138 ATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDS  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
                      +..........                                                                     
T Consensus       171 ~~~~~~~~~~~---------------------------------------------------------------------  181 (283)
T cd05048         171 SRDIYSADYYR---------------------------------------------------------------------  181 (283)
T ss_pred             eeecccccccc---------------------------------------------------------------------
Confidence            33111000000                                                                     


Q ss_pred             ccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCcc
Q psy9736         218 YLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLT  297 (400)
Q Consensus       218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g  297 (400)
                                                                      ......+++.|+|||.+.+..++..+|.||+|
T Consensus       182 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG  213 (283)
T cd05048         182 ------------------------------------------------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFG  213 (283)
T ss_pred             ------------------------------------------------ccCCCcccccccCHHHhccCcCchhhhHHHHH
Confidence                                                            01122457789999999888778889999999


Q ss_pred             chhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         298 GSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       298 ~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +++|||++ |.-         ||.. .+..+....+.++..+..  +.+++..+.+|+.+||+.||++||++.+++++
T Consensus       214 ~il~el~~~g~~---------p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         214 VVLWEIFSYGLQ---------PYYG-FSNQEVIEMIRSRQLLPC--PEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHcCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999997 654         7766 555566666666554443  44588899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0983|consensus

Probab=100.00  E-value=1.1e-33  Score=251.85  Aligned_cols=250  Identities=20%  Similarity=0.315  Sum_probs=211.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-hHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-KKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|+.+.|++.+-+.++.-+|+|.+...... +.++++..++++..- .+++||+.+++|..+..+++.||.| +..+.
T Consensus       100 lGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~C~e  178 (391)
T KOG0983|consen  100 LGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-STCAE  178 (391)
T ss_pred             hcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HHHHH
Confidence            69999999999999998889999998755433 346777778777665 5899999999999999999999999 54666


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .++++  +++++..+-.+...++.||.||.++ +|+|||+||+||++|..|++|++|||  ++..+.+...         
T Consensus       179 kLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFG--IsGrlvdSkA---------  247 (391)
T KOG0983|consen  179 KLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFG--ISGRLVDSKA---------  247 (391)
T ss_pred             HHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccc--ccceeecccc---------
Confidence            66653  4789888888999999999999975 99999999999999999999999999  5442222111         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       248 --------------------------------------------------------------------------------  247 (391)
T KOG0983|consen  248 --------------------------------------------------------------------------------  247 (391)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     ++...|.+.|||||.+.-   ..|...+|.||+|+.++|+.+|.+    
T Consensus       248 -------------------------------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~y----  292 (391)
T KOG0983|consen  248 -------------------------------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQY----  292 (391)
T ss_pred             -------------------------------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccC----
Confidence                                           122357788999998874   345577899999999999999988    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                           ||.......+.+..|+...+|.++....+|+.+.+|+..||++|+.+||.-.++|+|||+..-.+
T Consensus       293 -----Py~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  293 -----PYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             -----CCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence                 99998999999999999999999988889999999999999999999999999999999886443

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=8.3e-33  Score=261.06  Aligned_cols=247  Identities=21%  Similarity=0.332  Sum_probs=199.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|+|.++.|+++.+......+++|...... ....+.+.+|+.+++.++|+||+++++.+......++|+||+++++|.+
T Consensus        13 ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   92 (284)
T cd06620          13 LGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDR   92 (284)
T ss_pred             cCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHH
Confidence            689999999999887777778887765432 2345778999999999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.. +.+++..+..++.+++.++.|||+ ++++|+||+|+||+++.++.++|+|||  .+...    ...         
T Consensus        93 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~g--l~~~~----~~~---------  157 (284)
T cd06620          93 IYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFG--VSGEL----INS---------  157 (284)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCC--cccch----hhh---------
Confidence            8875 468999999999999999999997 589999999999999999999999999  33211    000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (284)
T cd06620         158 --------------------------------------------------------------------------------  157 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......|+..|+|||++.+......+|.|++|+++|++++|..         
T Consensus       158 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~---------  200 (284)
T cd06620         158 ----------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKF---------  200 (284)
T ss_pred             ----------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCC---------
Confidence                                        0112357889999999887777788999999999999999976         


Q ss_pred             CcchhhcH----------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         318 PYLFILSC----------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       318 P~~~~~~~----------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ||......          .+....+....++.+.. ..++..+.+|+.+||..||++|||+.|+++||||...
T Consensus       201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         201 PFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS-SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             CCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc-hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            77652221          23344444444443322 2367789999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.2e-32  Score=257.22  Aligned_cols=247  Identities=24%  Similarity=0.376  Sum_probs=195.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-----cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      +|.|.++.|+.+.+...+..|++|.+....     ....+.+.+|+.++++++|+||+++++++...  ..+++++||++
T Consensus        10 l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~   89 (265)
T cd06652          10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMP   89 (265)
T ss_pred             EecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecC
Confidence            588999999999888888888888765321     12345788999999999999999999988763  46889999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+++.+ ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||  .+.........     
T Consensus        90 ~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg--~~~~~~~~~~~-----  162 (265)
T cd06652          90 GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG--ASKRLQTICLS-----  162 (265)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCc--ccccccccccc-----
Confidence            9999998875 468899999999999999999999999999999999999999999999999  33311000000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (265)
T cd06652         163 --------------------------------------------------------------------------------  162 (265)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     ........|+..|+|||++.+......+|.|++|+++|+|++|..    
T Consensus       163 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~----  207 (265)
T cd06652         163 -------------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP----  207 (265)
T ss_pred             -------------------------------ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC----
Confidence                                           000122357889999999988777788999999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                           ||.. .+.......+.... .+.+  +..++..+.++|++||. +|++||+++++++|||+.
T Consensus       208 -----p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         208 -----PWAE-FEAMAAIFKIATQPTNPVL--PPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             -----CCCc-cchHHHHHHHhcCCCCCCC--chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence                 8766 34444444444332 2222  34477889999999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.5e-32  Score=254.93  Aligned_cols=241  Identities=23%  Similarity=0.305  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.++.+.+.....++++|.+.... ....+.+.+|+.+++.++|+||+++++.+..++..++++||+++++|.+
T Consensus         8 lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   87 (255)
T cd08219           8 VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQ   87 (255)
T ss_pred             eeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHH
Confidence            589999999999888888888999875432 2345678899999999999999999999999999999999999999998


Q ss_pred             HHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++..   ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.......           
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg--~~~~~~~~~-----------  154 (255)
T cd08219          88 KIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFG--SARLLTSPG-----------  154 (255)
T ss_pred             HHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccC--cceeecccc-----------
Confidence            8864   258899999999999999999999999999999999999999999999999  332110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (255)
T cd08219         155 --------------------------------------------------------------------------------  154 (255)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......|++.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       155 ----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~--------  198 (255)
T cd08219         155 ----------------------------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKH--------  198 (255)
T ss_pred             ----------------------------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccC--------
Confidence                                        00112357788999999988777788999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                       ||.. .+.......+..+....+  +..++..+.+||.+||+.||++|||+.++++-
T Consensus       199 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         199 -PFQA-NSWKNLILKVCQGSYKPL--PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             -CCCC-CCHHHHHHHHhcCCCCCC--CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence             8766 566666666666654444  33477889999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=7.8e-33  Score=271.98  Aligned_cols=244  Identities=17%  Similarity=0.233  Sum_probs=187.7

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||.|+|+.||.++     .......||+|.+.... ....+.+.+|+.+++.+ +|+||+++++++..++..+++|||++
T Consensus        43 LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  122 (375)
T cd05104          43 LGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCC  122 (375)
T ss_pred             ecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhcc
Confidence            6899999998874     33445678888876432 23456788999999999 89999999999999999999999999


Q ss_pred             CCChHHHHhhc---------------------------------------------------------------------
Q psy9736          74 GGSLTDVVTET---------------------------------------------------------------------   84 (400)
Q Consensus        74 ~~~L~~~i~~~---------------------------------------------------------------------   84 (400)
                      +|+|.+++...                                                                     
T Consensus       123 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (375)
T cd05104         123 YGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSE  202 (375)
T ss_pred             CCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHH
Confidence            99999888531                                                                     


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          85 -------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        85 -------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                             .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++..........         
T Consensus       203 ~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG--~a~~~~~~~~~~---------  271 (375)
T cd05104         203 ILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFG--LARDIRNDSNYV---------  271 (375)
T ss_pred             HHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCc--cceeccCccccc---------
Confidence                   36778889999999999999999999999999999999999999999999  433111000000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       272 --------------------------------------------------------------------------------  271 (375)
T cd05104         272 --------------------------------------------------------------------------------  271 (375)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++.+..+...+|.||+|+++|||++ |..        
T Consensus       272 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~--------  315 (375)
T cd05104         272 ----------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSS--------  315 (375)
T ss_pred             ----------------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCC--------
Confidence                                        0111234567999999999888899999999999999997 554        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                       ||............+..+..+..  +...+..+.+||.+||+.||++|||+.++++.
T Consensus       316 -p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         316 -PYPGMPVDSKFYKMIKEGYRMLS--PECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             -CCCCCCchHHHHHHHHhCccCCC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence             77653333333333333332222  23356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.8e-33  Score=256.52  Aligned_cols=243  Identities=27%  Similarity=0.437  Sum_probs=196.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-----chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-----PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-----~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|+|+++.+|.+.+......|++|.+.....     ...+.+.+|+.+++.++|+||+++++++..+...++++||++++
T Consensus         8 ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (258)
T cd06632           8 LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGG   87 (258)
T ss_pred             eeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCC
Confidence            5889999999988776777788887654331     23467889999999999999999999999989999999999999


Q ss_pred             ChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          76 SLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        76 ~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +|.+++.+. .+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .........         
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~--~~~~~~~~~---------  156 (258)
T cd06632          88 SLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFG--MAKQVVEFS---------  156 (258)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCc--cceeccccc---------
Confidence            999998765 58999999999999999999999999999999999999999999999999  322110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (258)
T cd06632         157 --------------------------------------------------------------------------------  156 (258)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     ......|++.|+|||.+.... +...+|.|++|+++|++++|..     
T Consensus       157 -------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~-----  200 (258)
T cd06632         157 -------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKP-----  200 (258)
T ss_pred             -------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC-----
Confidence                                           011235677899999887655 5678999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHh-CCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         314 HFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                          ||.. .........+.. ...+.+  +..++..+.+|+.+||+.+|++||++.+++.|||+
T Consensus       201 ----pf~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         201 ----PWSQ-LEGVAAVFKIGRSKELPPI--PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             ----Cccc-CcHHHHHHHHHhcccCCCc--CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                7766 334455555444 222333  33477889999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1e-32  Score=259.35  Aligned_cols=242  Identities=15%  Similarity=0.234  Sum_probs=194.1

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+++.||++....     ....|++|.+...... ..+.+.+|+++++.++|+||+++++++..+...+++|||+++
T Consensus        13 lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   92 (280)
T cd05049          13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEH   92 (280)
T ss_pred             ccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCC
Confidence            6899999999886532     3466888887654443 357789999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          75 GSLTDVVTET---------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        75 ~~L~~~i~~~---------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      ++|.+++...               .+++..+..++.|++.|+.|+|+.+++|+||||+||+++.++.++|+|||  .+.
T Consensus        93 ~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g--~~~  170 (280)
T cd05049          93 GDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFG--MSR  170 (280)
T ss_pred             CCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcc--cce
Confidence            9999998632               36888999999999999999999999999999999999999999999999  332


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ........                                                                        
T Consensus       171 ~~~~~~~~------------------------------------------------------------------------  178 (280)
T cd05049         171 DVYTTDYY------------------------------------------------------------------------  178 (280)
T ss_pred             ecccCcce------------------------------------------------------------------------
Confidence            11000000                                                                        


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   .......+++.|+|||++....+...+|.||+|++
T Consensus       179 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (280)
T cd05049         179 ---------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV  213 (280)
T ss_pred             ---------------------------------------------ecCCCCcccceecChhhhccCCcchhhhHHHHHHH
Confidence                                                         00112235678999999988888888999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +|||++ |..         ||.. .+..+....+..+.....  +..++..+.+++++||..||++|||+.|+++
T Consensus       214 l~e~~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         214 LWEIFTYGKQ---------PWYG-LSNEEVIECITQGRLLQR--PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHHhcCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999998 776         8776 455555666665544333  3357889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=9.7e-33  Score=266.31  Aligned_cols=133  Identities=25%  Similarity=0.356  Sum_probs=118.9

Q ss_pred             CcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           2 KRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         2 g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      |.|+++.||.+.+......||+|.......  ...+.+.+|+.+++.++|+||++++++|..++..++++||+.++++.+
T Consensus         9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~   88 (328)
T cd08226           9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS   88 (328)
T ss_pred             cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence            344999999999988888999998765432  234678899999999999999999999999999999999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ++.+.   .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++++||+
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~  146 (328)
T cd08226          89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLS  146 (328)
T ss_pred             HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechH
Confidence            88753   58999999999999999999999999999999999999999999999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=8e-33  Score=258.80  Aligned_cols=241  Identities=13%  Similarity=0.195  Sum_probs=191.4

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+|+.|+++..   ......|++|.+..... ...+.+.+|+.++++++|+||+++++++..++..++||||+++++
T Consensus        13 ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   92 (266)
T cd05064          13 LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGA   92 (266)
T ss_pred             ecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCc
Confidence            68899999987743   34567888888765432 234678899999999999999999999999999999999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..++.++.|++.|+.|||+.+++||||||+||+++.++.++++|||  .........  .      
T Consensus        93 L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg--~~~~~~~~~--~------  162 (266)
T cd05064          93 LDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFR--RLQEDKSEA--I------  162 (266)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCc--ccccccccc--h------
Confidence            99988753  68999999999999999999999999999999999999999999999999  222100000  0      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (266)
T cd05064         163 --------------------------------------------------------------------------------  162 (266)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    .......++..|+|||.+....+...+|.||+|+++||+++ |..     
T Consensus       163 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~-----  207 (266)
T cd05064         163 ------------------------------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGER-----  207 (266)
T ss_pred             ------------------------------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCC-----
Confidence                                          00011234568999999988888889999999999999775 765     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+..+....  .+..++..+.+++.+||+.+|++|||++++++
T Consensus       208 ----p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         208 ----PYWD-MSGQDVIKAVEDGFRLP--APRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             ----CcCc-CCHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                7766 55555555555543332  24457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=8.7e-33  Score=269.41  Aligned_cols=245  Identities=18%  Similarity=0.254  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||.|+++.|+.+.+......|++|.+...  .....+.+.+|+.++++++|+||++++++|...      ...++|+||+
T Consensus        24 lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~  103 (353)
T cd07850          24 IGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELM  103 (353)
T ss_pred             eccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEecc
Confidence            68999999999998888888999987532  223345678899999999999999999988643      3579999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      . ++|.+.+... +++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......       
T Consensus       104 ~-~~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg--~~~~~~~~~-------  172 (353)
T cd07850         104 D-ANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTSF-------  172 (353)
T ss_pred             C-CCHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCc--cceeCCCCC-------
Confidence            5 4888877654 8999999999999999999999999999999999999999999999999  333110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (353)
T cd07850         173 --------------------------------------------------------------------------------  172 (353)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ......|++.|+|||++.+..+...+|.|++|+++|+|++|..    
T Consensus       173 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~----  215 (353)
T cd07850         173 ---------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTV----  215 (353)
T ss_pred             ---------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCC----
Confidence                                             0112256788999999988888889999999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCC---------------------C-----Ccch--------------hhhhcHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKK---------------------P-----EIKE--------------KEKLSQIFQD  352 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~---------------------~-----~~~~--------------~~~~s~~~~d  352 (400)
                           ||.. .+.......+.....                     +     .+..              +...+..+.+
T Consensus       216 -----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (353)
T cd07850         216 -----LFPG-TDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARD  289 (353)
T ss_pred             -----CCCC-CCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHH
Confidence                 6654 222222222211000                     0     0000              1123556899


Q ss_pred             HHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         353 FLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       353 li~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ||.+||+.||++|||+.|+|.||||+.
T Consensus       290 li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         290 LLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             HHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            999999999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.3e-32  Score=260.14  Aligned_cols=250  Identities=28%  Similarity=0.410  Sum_probs=196.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.|+.+.+......+++|.+..... ...+++.+|++++++++|+||++++++|...  +.++++|||+++++|
T Consensus         9 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L   88 (287)
T cd06621           9 LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSL   88 (287)
T ss_pred             eccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCH
Confidence            5899999999999888888888888764332 3456789999999999999999999988653  478999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++..     ..+++..+..++.|++.||.|||+.+++|+|++|+||+++.++.++|+|||  .+.......       
T Consensus        89 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg--~~~~~~~~~-------  159 (287)
T cd06621          89 DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFG--VSGELVNSL-------  159 (287)
T ss_pred             HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecc--ccccccccc-------
Confidence            887653     358899999999999999999999999999999999999999999999999  332110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (287)
T cd06621         160 --------------------------------------------------------------------------------  159 (287)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                        .....++..|+|||.+.+..+...+|.|++|+++|+|++|..    
T Consensus       160 ----------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~----  201 (287)
T cd06621         160 ----------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRF----  201 (287)
T ss_pred             ----------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC----
Confidence                                              001245667999999888777788999999999999999986    


Q ss_pred             cccccCcchh----hcHHHHHHHHHhCCCCCcch----hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         313 PHFLIPYLFI----LSCRQALYLIATNKKPEIKE----KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       313 ~~~~~P~~~~----~~~~~~~~~i~~~~~~~~~~----~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                           ||...    ....+....+.....+.+..    ...+++.+.+||.+||+.||++|||+.|++.||||++...
T Consensus       202 -----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         202 -----PFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             -----CCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence                 77653    23344444444322222221    1236778999999999999999999999999999975443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.8e-32  Score=253.40  Aligned_cols=244  Identities=25%  Similarity=0.386  Sum_probs=202.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|++.+.....++++|.+.....  ...+.+.+|+++++.++|+|++++.+.+..+...++++||+++++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (258)
T cd08215           8 IGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLS   87 (258)
T ss_pred             eccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHH
Confidence            5889999999999888888899998875543  35567889999999999999999999999999999999999999999


Q ss_pred             HHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          79 DVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        79 ~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +.+..     ..+++..+..++.+++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+.......        
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~--~~~~~~~~~--------  157 (258)
T cd08215          88 QKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFG--ISKVLSSTV--------  157 (258)
T ss_pred             HHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCcc--ceeecccCc--------
Confidence            98875     468999999999999999999999999999999999999999999999999  332110000        


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (258)
T cd08215         158 --------------------------------------------------------------------------------  157 (258)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     .......|++.|+|||.+....+...+|.|++|+++|+|++|..     
T Consensus       158 -------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~-----  201 (258)
T cd08215         158 -------------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH-----  201 (258)
T ss_pred             -------------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCC-----
Confidence                                           00122357788999999888877788999999999999999976     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                          ||.. .+..+....+.+...+.++  ..++..+.+++++||..+|++|||+.++|+||||
T Consensus       202 ----p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         202 ----PFEG-ENLLELALKILKGQYPPIP--SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             ----CCCC-CcHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence                7755 4455555555555444443  3578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.8e-32  Score=262.16  Aligned_cols=259  Identities=30%  Similarity=0.473  Sum_probs=206.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.+|.+.+......+++|.+...   .....+++.+|+.+++.++|+|++++++++..+...++|+||+. +++
T Consensus        23 lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l  101 (308)
T cd06634          23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA  101 (308)
T ss_pred             eeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCH
Confidence            58899999999988877778888877532   22234567899999999999999999999999999999999996 577


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+.+..  ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.....            
T Consensus       102 ~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg--~~~~~~~------------  167 (308)
T cd06634         102 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG--SASIMAP------------  167 (308)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcc--cceeecC------------
Confidence            776643  368999999999999999999999999999999999999999999999999  3221000            


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (308)
T cd06634         168 --------------------------------------------------------------------------------  167 (308)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     .....|++.|+|||.+..   ......+|.|++|+++|+|++|..    
T Consensus       168 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~----  212 (308)
T cd06634         168 -------------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----  212 (308)
T ss_pred             -------------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCC----
Confidence                                           011246677888888642   334467899999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||.. .+.......+..+..+... ...++..+.+||++||..+|++||+++++++|||+...+++....+.+..
T Consensus       213 -----p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~~~~~~~~  285 (308)
T cd06634         213 -----PLFN-MNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQR  285 (308)
T ss_pred             -----CCcc-ccHHHHHHHHhhcCCCCcC-cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhHHHHHHHH
Confidence                 7766 5555666666665544433 23478889999999999999999999999999999998887777766655


Q ss_pred             hHHH
Q psy9736         393 AKEA  396 (400)
Q Consensus       393 ~~~~  396 (400)
                      ..++
T Consensus       286 ~~~~  289 (308)
T cd06634         286 TKDA  289 (308)
T ss_pred             HHHH
Confidence            4433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-32  Score=260.78  Aligned_cols=246  Identities=20%  Similarity=0.261  Sum_probs=187.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.||++.+......|++|.+..... .....+.+|+.++++++|+||+++++++..+...++|+||+.+ +|.+
T Consensus        13 lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~   91 (291)
T cd07844          13 LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQ   91 (291)
T ss_pred             EeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHH
Confidence            5889999999998877778889988754322 2234567899999999999999999999999999999999975 8988


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++..  ..+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+.......            
T Consensus        92 ~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg--~~~~~~~~~------------  157 (291)
T cd07844          92 YMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFG--LARAKSVPS------------  157 (291)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccc--cccccCCCC------------
Confidence            8764  368999999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (291)
T cd07844         158 --------------------------------------------------------------------------------  157 (291)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......++..|+|||++.+ ..+...+|.||+|+++|+|++|..        
T Consensus       158 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~--------  202 (291)
T cd07844         158 ---------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRP--------  202 (291)
T ss_pred             ---------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       00111245678999998865 345578999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhC---CCC-----------------------Cc-chhhhhc--HHHHHHHHHhhhhhhhhhhc
Q psy9736         317 IPYLFILSCRQALYLIATN---KKP-----------------------EI-KEKEKLS--QIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~---~~~-----------------------~~-~~~~~~s--~~~~dli~~~L~~dP~~R~s  367 (400)
                       ||.......+.+..+.+.   ..+                       .+ .....++  ..+.+++.+||+.||++|||
T Consensus       203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps  281 (291)
T cd07844         203 -LFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS  281 (291)
T ss_pred             -CCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC
Confidence             765533233333222111   000                       00 0001233  67889999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      +.++++||||
T Consensus       282 ~~e~l~~~~f  291 (291)
T cd07844         282 AAEAMKHPYF  291 (291)
T ss_pred             HHHHhcCCCC
Confidence            9999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.3e-32  Score=259.39  Aligned_cols=247  Identities=19%  Similarity=0.294  Sum_probs=189.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHh---CCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRE---NKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~---l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||.|+|+.||.+.+......+++|.+....   ....+.+.+|..+++.   ..|+||+.+++.+..++..++||||+++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            689999999999887777778888764322   1122334455544444   4799999999999988999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++++|||  .+...    ...     
T Consensus        82 ~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg--~~~~~----~~~-----  150 (279)
T cd05633          82 GDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG--LACDF----SKK-----  150 (279)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCC--cceec----ccc-----
Confidence            999988864 479999999999999999999999999999999999999999999999999  33211    000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (279)
T cd05633         151 --------------------------------------------------------------------------------  150 (279)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......||+.|+|||++.. ..+...+|.|++|+++|+|++|..    
T Consensus       151 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~----  194 (279)
T cd05633         151 --------------------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHS----  194 (279)
T ss_pred             --------------------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC----
Confidence                                            0011257889999998863 445678999999999999999987    


Q ss_pred             cccccCcchhhc-HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccccC
Q psy9736         313 PHFLIPYLFILS-CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  381 (400)
Q Consensus       313 ~~~~~P~~~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~~  381 (400)
                           ||..... ...............+  +..++..+.++|++||..||++|+     |++++++||||+...
T Consensus       195 -----pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         195 -----PFRQHKTKDKHEIDRMTLTVNVEL--PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             -----CcCCCCCcCHHHHHHHhhcCCcCC--ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence                 8865322 2222222222222233  334788999999999999999999     699999999999743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-32  Score=258.14  Aligned_cols=247  Identities=23%  Similarity=0.329  Sum_probs=192.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.++++.+......|++|.+....  ....+.+.+|+.++++++|+||+++++++..++..++++||++++.+.
T Consensus         9 i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~   88 (288)
T cd07833           9 VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLE   88 (288)
T ss_pred             ecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHH
Confidence            588999999999888888889999876432  223467899999999999999999999999999999999999886666


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+... ..+++..+..++.|++.|+.|||+.+++|+|++|+||+++.++.++|+|||  .+........           
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g--~~~~~~~~~~-----------  155 (288)
T cd07833          89 LLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFG--FARALRARPA-----------  155 (288)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeee--cccccCCCcc-----------
Confidence            65554 368999999999999999999999999999999999999999999999999  3331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (288)
T cd07833         156 --------------------------------------------------------------------------------  155 (288)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......++..|+|||++.+. .+...+|.|++|+++|+|++|..        
T Consensus       156 ---------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~--------  200 (288)
T cd07833         156 ---------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP--------  200 (288)
T ss_pred             ---------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC--------
Confidence                                       012223577889999999887 66688999999999999999975        


Q ss_pred             cCcchhhcHHHHHHHHHhCC---------------------CCCcc--------hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         317 IPYLFILSCRQALYLIATNK---------------------KPEIK--------EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~---------------------~~~~~--------~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                       ||.. .+..+.+..+....                     .+...        .+..++..+.+||++||..+|++|||
T Consensus       201 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  278 (288)
T cd07833         201 -LFPG-DSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT  278 (288)
T ss_pred             -CCCC-CCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc
Confidence             5544 22222222221100                     00000        01123778999999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      ++++++||||
T Consensus       279 ~~~il~~~~f  288 (288)
T cd07833         279 CDELLQHPYF  288 (288)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-32  Score=254.07  Aligned_cols=243  Identities=19%  Similarity=0.299  Sum_probs=198.4

Q ss_pred             CCcceEEEEEecCCCce---eEEEEeccccccCcch-HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLAQQPK-KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~~~~~-~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+|+.|+.+.+...   ...+++|.+....... .+.+.+|+.+++.++|+||+++++++..+...++++||+++++
T Consensus         3 ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   82 (262)
T cd00192           3 LGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGD   82 (262)
T ss_pred             cccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCc
Confidence            68999999999988755   7788888887654432 6778999999999999999999999999899999999999999


Q ss_pred             hHHHHhh----------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          77 LTDVVTE----------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        77 L~~~i~~----------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |.+++..          ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||  .+........
T Consensus        83 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg--~~~~~~~~~~  160 (262)
T cd00192          83 LLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFG--LSRDVYDDDY  160 (262)
T ss_pred             HHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccc--cccccccccc
Confidence            9999875          468999999999999999999999999999999999999999999999999  3331111000


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .                                                                               
T Consensus       161 ~-------------------------------------------------------------------------------  161 (262)
T cd00192         161 Y-------------------------------------------------------------------------------  161 (262)
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                            .......+++.|+|||.+....+...+|.|++|+++|+|+++
T Consensus       162 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  203 (262)
T cd00192         162 --------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTL  203 (262)
T ss_pred             --------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhc
Confidence                                                  001223567789999999887777889999999999999984


Q ss_pred             -CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         307 -HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       307 -d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                       ..         ||.. .+..+....+..+.....  +..++..+.+++.+||..||++|||+.+++++
T Consensus       204 g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         204 GAT---------PYPG-LSNEEVLEYLRKGYRLPK--PEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCC---------CCCC-CCHHHHHHHHHcCCCCCC--CccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence             54         6665 455566666655433332  44578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.4e-32  Score=255.40  Aligned_cols=244  Identities=25%  Similarity=0.346  Sum_probs=197.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.||++.+......+++|.+....  ....+++.+|+.++++++|+||+++++.+..  +...++++||+++++
T Consensus         8 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~   87 (265)
T cd08217           8 IGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGD   87 (265)
T ss_pred             eccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCC
Confidence            588999999999888887888888775432  2345678899999999999999999987754  457899999999999


Q ss_pred             hHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH-----hCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          77 LTDVVTE-----TCMDEGQIAAVCREVLQALEFLH-----SNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        77 L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH-----~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |.+++..     ..+++..++.++.|++.|+.|||     +.+++|+||+|+||+++.++.++++|||  .+........
T Consensus        88 L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g--~~~~~~~~~~  165 (265)
T cd08217          88 LAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG--LAKILGHDSS  165 (265)
T ss_pred             HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc--ccccccCCcc
Confidence            9998864     36899999999999999999999     8899999999999999999999999999  3331110000


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (265)
T cd08217         166 --------------------------------------------------------------------------------  165 (265)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                             ......|++.|+|||++....+...+|.|++|+++|+|++|
T Consensus       166 ---------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g  206 (265)
T cd08217         166 ---------------------------------------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCAL  206 (265)
T ss_pred             ---------------------------------------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHC
Confidence                                                   01122577889999999887777889999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      ..         ||.. .+.......+..+..+.+  +..++..+.+++.+||+.+|++|||+.++++|||+
T Consensus       207 ~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         207 SP---------PFTA-RNQLQLASKIKEGKFRRI--PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CC---------cccC-cCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            76         7766 344455555555544444  34578899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=2.2e-32  Score=254.01  Aligned_cols=239  Identities=20%  Similarity=0.256  Sum_probs=191.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+|+.|+.+..+. ..++++|.+... ....+.+.+|+.++++++|+||+++++++..+...+++|||+++++|.++
T Consensus        12 lg~G~~~~vy~~~~~~-~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~   89 (256)
T cd05114          12 LGSGQFGVVHLGKWRA-QIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY   89 (256)
T ss_pred             ecCCcCceEEEEEecc-CceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence            6889999999886643 346888876533 33456789999999999999999999999998999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  +.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.........           
T Consensus        90 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g--~~~~~~~~~~~-----------  156 (256)
T cd05114          90 LRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFG--MTRYVLDDEYT-----------  156 (256)
T ss_pred             HHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCC--CccccCCCcee-----------
Confidence            864  358999999999999999999999999999999999999999999999999  33311000000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd05114         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                 ......++..|+|||++....+...+|.|++|+++|||++ |..         
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~---------  200 (256)
T cd05114         157 ---------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKM---------  200 (256)
T ss_pred             ---------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCC---------
Confidence                                       0011134567999999988877789999999999999999 776         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ||.. .+..+....+..+..+..  +...+..+.+++++||..||++|||++++++
T Consensus       201 p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         201 PFEK-KSNYEVVEMISRGFRLYR--PKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CCCC-CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            7765 566666666766644333  2335778999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.5e-32  Score=266.60  Aligned_cols=252  Identities=21%  Similarity=0.242  Sum_probs=192.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC--------------CEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG--------------EELW   66 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--------------~~~~   66 (400)
                      ||.|+++.||++.+......|++|.+........+.+.+|+.++++++|+||+++++++...              ...+
T Consensus        13 Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (342)
T cd07854          13 LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVY   92 (342)
T ss_pred             ecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEE
Confidence            68999999999998888888999988766555567788999999999999999999876643              3578


Q ss_pred             EEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhcccc
Q psy9736          67 VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        67 lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      +++||++ ++|.+.+..+.+++..++.++.|++.|+.|||+.+++|+||||+||+++. ++.++++|||  .+.......
T Consensus        93 lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg--~~~~~~~~~  169 (342)
T cd07854          93 IVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG--LARIVDPHY  169 (342)
T ss_pred             EEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc--cceecCCcc
Confidence            9999996 58988888778999999999999999999999999999999999999975 4678999999  333110000


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ...                                                                             
T Consensus       170 ~~~-----------------------------------------------------------------------------  172 (342)
T cd07854         170 SHK-----------------------------------------------------------------------------  172 (342)
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                             .......|+..|+|||++.. ..+...+|.||+|+++|+|+
T Consensus       173 ---------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~  213 (342)
T cd07854         173 ---------------------------------------GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML  213 (342)
T ss_pred             ---------------------------------------cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHH
Confidence                                                   00111246788999997654 44557899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCC------------------------CCcch---hhhhcHHHHHHHHHh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKK------------------------PEIKE---KEKLSQIFQDFLDQC  357 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~------------------------~~~~~---~~~~s~~~~dli~~~  357 (400)
                      +|..         ||.. .++......+....+                        +..+.   ...++..+.+||++|
T Consensus       214 ~g~~---------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  283 (342)
T cd07854         214 TGKP---------LFAG-AHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQI  283 (342)
T ss_pred             hCCC---------CCCC-CCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHH
Confidence            9987         7765 333333333322211                        00000   113567899999999


Q ss_pred             hhhhhhhhhcHHHHhcCccccccC
Q psy9736         358 LEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       358 L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      |..||++|||+.++++||||+.-.
T Consensus       284 L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         284 LTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             hCCCchhccCHHHHhCCCcccccc
Confidence            999999999999999999998633

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.6e-32  Score=262.43  Aligned_cols=250  Identities=21%  Similarity=0.249  Sum_probs=192.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      ||.|.++.||++.+..++..|++|.+......  ....+.+|+.++++++|+||+++++++...  +..++|+||+.+ +
T Consensus        15 ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~   93 (309)
T cd07845          15 IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-D   93 (309)
T ss_pred             eeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-C
Confidence            68999999999999888888999987644322  123456899999999999999999998754  468999999964 8


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++..  ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+.......         
T Consensus        94 l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg--~~~~~~~~~---------  162 (309)
T cd07845          94 LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFG--LARTYGLPA---------  162 (309)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccc--eeeecCCcc---------
Confidence            8887764  468999999999999999999999999999999999999999999999999  333111000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (309)
T cd07845         163 --------------------------------------------------------------------------------  162 (309)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ...+...+++.|+|||++.+ ..+...+|.|++|+++|||++|..     
T Consensus       163 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~-----  207 (309)
T cd07845         163 ------------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP-----  207 (309)
T ss_pred             ------------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCC-----
Confidence                                          00111234678999998865 345578999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCC------------------Ccc--------h-hhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKP------------------EIK--------E-KEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~------------------~~~--------~-~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                          ||.. .+..+.+..+......                  .+.        . ....++.+.+||.+||+.||++||
T Consensus       208 ----~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~  282 (309)
T cd07845         208 ----LLPG-KSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRA  282 (309)
T ss_pred             ----CCCC-CCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCc
Confidence                6655 5555555544331100                  000        0 012477899999999999999999


Q ss_pred             cHHHHhcCccccccCC
Q psy9736         367 SASLLLKHPFLKIARP  382 (400)
Q Consensus       367 s~~~~l~hp~~~~~~~  382 (400)
                      |+.++++||||+....
T Consensus       283 t~~~il~h~~f~~~~~  298 (309)
T cd07845         283 TAEEALESSYFKEKPL  298 (309)
T ss_pred             CHHHHhcChhhccCCC
Confidence            9999999999996433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=9.3e-33  Score=271.34  Aligned_cols=242  Identities=17%  Similarity=0.255  Sum_probs=186.9

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.|+.+.+     ......||+|.+.... ....+.+.+|+.+++.+ +|+||+++++++...+.++++|||++
T Consensus        46 LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~  125 (374)
T cd05106          46 LGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCC  125 (374)
T ss_pred             ecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhcc
Confidence            68999999988753     3334568888886443 23456788999999999 89999999999999999999999999


Q ss_pred             CCChHHHHhhc---------------------------------------------------------------------
Q psy9736          74 GGSLTDVVTET---------------------------------------------------------------------   84 (400)
Q Consensus        74 ~~~L~~~i~~~---------------------------------------------------------------------   84 (400)
                      +++|.+++...                                                                     
T Consensus       126 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (374)
T cd05106         126 YGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTED  205 (374)
T ss_pred             CCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCC
Confidence            99999887421                                                                     


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccc
Q psy9736          85 --CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGT  162 (400)
Q Consensus        85 --~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (400)
                        .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.........               
T Consensus       206 ~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfG--la~~~~~~~~~---------------  268 (374)
T cd05106         206 SWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFG--LARDIMNDSNY---------------  268 (374)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeece--eeeeccCCcce---------------
Confidence              36778899999999999999999999999999999999999999999999  33211000000               


Q ss_pred             eeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccc
Q psy9736         163 VYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTS  242 (400)
Q Consensus       163 ~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (400)
                                                                                                      
T Consensus       269 --------------------------------------------------------------------------------  268 (374)
T cd05106         269 --------------------------------------------------------------------------------  268 (374)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccccCcch
Q psy9736         243 TSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLF  321 (400)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~  321 (400)
                                            .......+++.|+|||++.+..++..+|.||+|+++|||++ |..         ||..
T Consensus       269 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~---------Pf~~  317 (374)
T cd05106         269 ----------------------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS---------PYPG  317 (374)
T ss_pred             ----------------------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC---------CCcc
Confidence                                  00111235567999999988888899999999999999997 765         7766


Q ss_pred             hhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         322 ILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       322 ~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ..... ........ ..+..  +...+..+.++|.+||+.||++|||+.++++
T Consensus       318 ~~~~~-~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         318 ILVNS-KFYKMVKRGYQMSR--PDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             ccccH-HHHHHHHcccCccC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            33333 33333333 22222  2336788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.9e-32  Score=259.71  Aligned_cols=245  Identities=20%  Similarity=0.279  Sum_probs=188.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      +|.|.++.||.+.+......+++|.+.....  .....+.+|+.++++++|+||+++++++..+  ...++++||+++ +
T Consensus        13 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~   91 (293)
T cd07843          13 IEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-D   91 (293)
T ss_pred             hcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-C
Confidence            6899999999999988888889988864432  2234567899999999999999999998877  789999999964 8


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+........        
T Consensus        92 L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g--~~~~~~~~~~--------  161 (293)
T cd07843          92 LKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFG--LAREYGSPLK--------  161 (293)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecC--ceeeccCCcc--------
Confidence            88887643  58999999999999999999999999999999999999999999999999  3331111000        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (293)
T cd07843         162 --------------------------------------------------------------------------------  161 (293)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     ......+++.|+|||.+.+.. ....+|.|++|+++|+|++|..     
T Consensus       162 -------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~-----  205 (293)
T cd07843         162 -------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP-----  205 (293)
T ss_pred             -------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC-----
Confidence                                           011224677899999887643 3578999999999999999976     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCC--------------------------Ccc--hhhh-hcHHHHHHHHHhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKP--------------------------EIK--EKEK-LSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~--------------------------~~~--~~~~-~s~~~~dli~~~L~~dP~~  364 (400)
                          ||.. .+.......+......                          .+.  -+.. ++..+.+||++||+.||++
T Consensus       206 ----~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  280 (293)
T cd07843         206 ----LFPG-KSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAK  280 (293)
T ss_pred             ----CCCC-CChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccc
Confidence                6654 3333333333221000                          000  0011 4778999999999999999


Q ss_pred             hhcHHHHhcCccc
Q psy9736         365 RASASLLLKHPFL  377 (400)
Q Consensus       365 R~s~~~~l~hp~~  377 (400)
                      |||+.|++.||||
T Consensus       281 R~t~~ell~~~~f  293 (293)
T cd07843         281 RISAEDALKHPYF  293 (293)
T ss_pred             cCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0986|consensus

Probab=100.00  E-value=1.1e-33  Score=266.96  Aligned_cols=246  Identities=20%  Similarity=0.291  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+.+.-+-++.-+|.|++....   ..-....++|-.+|.+++.+.||.+--+|++.+.+|+|+.+|.||+|
T Consensus       193 lGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDL  272 (591)
T KOG0986|consen  193 LGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDL  272 (591)
T ss_pred             EecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCce
Confidence            588888888766555555445555443221   11224468999999999999999998899999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .-.|-+   ..|++..+..++.+|+.||++||..+||.||+||+||++|..|+++|+|+|  +|-.+    ...      
T Consensus       273 kfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLG--LAvei----~~g------  340 (591)
T KOG0986|consen  273 KFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLG--LAVEI----PEG------  340 (591)
T ss_pred             eEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccc--eEEec----CCC------
Confidence            766643   369999999999999999999999999999999999999999999999999  33311    111      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       341 --------------------------------------------------------------------------------  340 (591)
T KOG0986|consen  341 --------------------------------------------------------------------------------  340 (591)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .+.+.+.||++|||||++.+..|....|.|++||.+|||+.|.-      
T Consensus       341 ------------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~s------  384 (591)
T KOG0986|consen  341 ------------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHS------  384 (591)
T ss_pred             ------------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccC------
Confidence                                          12445589999999999999999899999999999999999987      


Q ss_pred             cccCcchh--hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccccc
Q psy9736         315 FLIPYLFI--LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~  379 (400)
                         ||..-  -...+.+.+.+...+..++  +++|+++++|.+.+|++||++|...     +++-+||||+.
T Consensus       385 ---PFr~~KeKvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  385 ---PFRQRKEKVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             ---chhhhhhhhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence               99662  2233344444555555554  6699999999999999999999754     58999999996

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3e-32  Score=258.24  Aligned_cols=242  Identities=16%  Similarity=0.242  Sum_probs=192.4

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.++.+..     ......+++|..........+.+.+|+.++++++|+||+++++++..+...+++|||++++
T Consensus        13 lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   92 (291)
T cd05094          13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG   92 (291)
T ss_pred             ecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCC
Confidence            58899999988763     2344557888876555445567899999999999999999999999989999999999999


Q ss_pred             ChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhh
Q psy9736          76 SLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIA  138 (400)
Q Consensus        76 ~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~  138 (400)
                      +|.+++...                 .+++..+..++.|++.|+.|||+++++|+||||+||+++.++.++|+|||  .+
T Consensus        93 ~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg--~a  170 (291)
T cd05094          93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG--MS  170 (291)
T ss_pred             cHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCC--cc
Confidence            999998642                 27889999999999999999999999999999999999999999999999  33


Q ss_pred             hhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccc
Q psy9736         139 TKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSY  218 (400)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (400)
                      ..........                                                                      
T Consensus       171 ~~~~~~~~~~----------------------------------------------------------------------  180 (291)
T cd05094         171 RDVYSTDYYR----------------------------------------------------------------------  180 (291)
T ss_pred             cccCCCceee----------------------------------------------------------------------
Confidence            3111000000                                                                      


Q ss_pred             cccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccc
Q psy9736         219 LVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTG  298 (400)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~  298 (400)
                                                                     ......+++.|+|||.+....+...+|.||+|+
T Consensus       181 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  213 (291)
T cd05094         181 -----------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV  213 (291)
T ss_pred             -----------------------------------------------cCCCCCcceeecChHHhccCCCCchhhHHHHHH
Confidence                                                           011224567899999998887778899999999


Q ss_pred             hhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         299 SILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       299 ~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|||++ |..         ||.. .+..+....+..+..+..  +...+..+.+++.+||+.||++|||+.++++
T Consensus       214 il~el~t~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         214 ILWEIFTYGKQ---------PWFQ-LSNTEVIECITQGRVLER--PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HHHHHHhCCCC---------CCCC-CCHHHHHHHHhCCCCCCC--CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            9999998 765         7766 555555555555544333  3346788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.2e-32  Score=255.33  Aligned_cols=242  Identities=19%  Similarity=0.315  Sum_probs=193.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+++.||++.+......|++|.+....   ......+.+|+.++++++|+||+++++++...+..++++||+++++|
T Consensus        10 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   89 (267)
T cd08228          10 IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDL   89 (267)
T ss_pred             eccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcH
Confidence            589999999999888777888888765322   23345688999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++..     ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||  .+........      
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g--~~~~~~~~~~------  161 (267)
T cd08228          90 SQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLG--LGRFFSSKTT------  161 (267)
T ss_pred             HHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccc--cceeccchhH------
Confidence            988752     247899999999999999999999999999999999999999999999999  3331110000      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (267)
T cd08228         162 --------------------------------------------------------------------------------  161 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ......|++.|+|||.+.+......+|.|++|+++|||++|..    
T Consensus       162 ---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~----  204 (267)
T cd08228         162 ---------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS----  204 (267)
T ss_pred             ---------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCC----
Confidence                                             0112247778999999988777788999999999999999986    


Q ss_pred             cccccCcchhh-cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFIL-SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.... +.......+.....+... ....+..+.++|.+||..+|++|||++++++
T Consensus       205 -----p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         205 -----PFYGDKMNLFSLCQKIEQCDYPPLP-TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             -----CCccccccHHHHHHHHhcCCCCCCC-hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence                 876533 233444444443333332 2346788999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.1e-32  Score=253.67  Aligned_cols=244  Identities=25%  Similarity=0.376  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|+|.++.++++.+......+++|.+....  ....+.+.+|+.+++.++|+||+++++.+..+...++++||+++++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (257)
T cd08225           8 IGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLM   87 (257)
T ss_pred             ecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHH
Confidence            588999999999888888888999876532  124467889999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc-eEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS-VKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+...   .+++..+..++.|++.|+.|||+.+++|+|++|+||+++.++. ++++|||  .+........        
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~--~~~~~~~~~~--------  157 (257)
T cd08225          88 KRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFG--IARQLNDSME--------  157 (257)
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccc--cchhccCCcc--------
Confidence            988643   4789999999999999999999999999999999999998864 6999999  3331110000        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (257)
T cd08225         158 --------------------------------------------------------------------------------  157 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ......|++.|+|||++....+...+|.|++|+++|+|++|..      
T Consensus       158 -------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~------  200 (257)
T cd08225         158 -------------------------------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH------  200 (257)
T ss_pred             -------------------------------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC------
Confidence                                           0112257788999999887777788999999999999999976      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                         ||.. .+..+....+.....+.+.  ..++..+.++|.+||..+|++|||+.++++||||
T Consensus       201 ---p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         201 ---PFEG-NNLHQLVLKICQGYFAPIS--PNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ---CCCC-ccHHHHHHHHhcccCCCCC--CCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence               7765 4445555555555433332  2367789999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.5e-32  Score=252.93  Aligned_cols=242  Identities=17%  Similarity=0.228  Sum_probs=191.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+++.||++.+......+++|...... ......+.+|+.++++++|+||+++++++..+...++|+||+++++|.+
T Consensus         3 lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   82 (252)
T cd05084           3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT   82 (252)
T ss_pred             cCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHH
Confidence            689999999999888777888888765332 2234678999999999999999999999998899999999999999999


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++...  .+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+..........         
T Consensus        83 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg--~~~~~~~~~~~~---------  151 (252)
T cd05084          83 FLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFG--MSREEEDGVYAS---------  151 (252)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccc--cCcccccccccc---------
Confidence            98643  58999999999999999999999999999999999999999999999999  332111000000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       152 --------------------------------------------------------------------------------  151 (252)
T cd05084         152 --------------------------------------------------------------------------------  151 (252)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||.+.+..+...+|.|++|+++|||++ |..        
T Consensus       152 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~--------  195 (252)
T cd05084         152 ----------------------------TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAV--------  195 (252)
T ss_pred             ----------------------------cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCC--------
Confidence                                        0001123456999999988777788999999999999997 554        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+....+...  +...+..+.+|+.+||+.||++|||+.++++
T Consensus       196 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         196 -PYAN-LSNQQTREAIEQGVRLPC--PELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             -Cccc-cCHHHHHHHHHcCCCCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             6654 444444555544433332  3456789999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0607|consensus

Probab=100.00  E-value=1.4e-32  Score=249.43  Aligned_cols=278  Identities=19%  Similarity=0.252  Sum_probs=215.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|.|..|.-+.+-++...+|+|++.......+.++.+|++++.+. .|+||++++++|+++..+|+|+|-+.||+|..
T Consensus        86 LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLs  165 (463)
T KOG0607|consen   86 LGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLS  165 (463)
T ss_pred             hcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHH
Confidence            68999988888877777777888887666555678899999999997 69999999999999999999999999999998


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .|..+ .|++..+.+++..|..||.|||.+||.|||+||+||+-..-   .-+||+||.+-...++..+-+  .+.-.+-
T Consensus       166 hI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s--pastP~L  243 (463)
T KOG0607|consen  166 HIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS--PASTPEL  243 (463)
T ss_pred             HHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC--CCCCccc
Confidence            88754 79999999999999999999999999999999999998554   457999998323333333333  2333355


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                      ....|+..|||||..---                      |..+..|....|+||+|++++=+|.|.++|.+..-     
T Consensus       244 ~tPvGSAEfMAPEVVd~f----------------------v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg-----  296 (463)
T KOG0607|consen  244 LTPVGSAEFMAPEVVDVF----------------------VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG-----  296 (463)
T ss_pred             cCcccchhhcchhHHhhh----------------------ccccccccccccHHHHHHHHHHHHhCCCCccCccC-----
Confidence            778899999999984221                      12223788999999999999999999999876321     


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                      +|+|                                      |.-|-               . 
T Consensus       297 ----------------~dCG--------------------------------------WdrGe---------------~-  306 (463)
T KOG0607|consen  297 ----------------ADCG--------------------------------------WDRGE---------------V-  306 (463)
T ss_pred             ----------------CcCC--------------------------------------ccCCC---------------c-
Confidence                            1111                                      21110               0 


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcc--hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIK--EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                            .......++..++.....++  +|..+|..++||+..+|..|+..|.++.++++|||++...+.
T Consensus       307 ------Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  307 ------CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             ------cHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence                  02334555555555555554  467799999999999999999999999999999999976553

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2.6e-32  Score=260.36  Aligned_cols=245  Identities=16%  Similarity=0.206  Sum_probs=182.8

Q ss_pred             CCcceEEEEEecCCCc----------------eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCC
Q psy9736           1 MKRGVTIDRFSSDDRR----------------FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGE   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~----------------~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   63 (400)
                      ||+|+|+.||++....                ....||+|.+..... .....+.+|+.++++++|+||+++++++....
T Consensus        13 lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   92 (304)
T cd05096          13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDED   92 (304)
T ss_pred             ecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCC
Confidence            6899999999885321                234688887765432 23467899999999999999999999999989


Q ss_pred             EEEEEEeccCCCChHHHHhhc--------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec
Q psy9736          64 ELWVVMEYLPGGSLTDVVTET--------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG  123 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~--------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~  123 (400)
                      ..+++|||+++++|.+++...                    .+++..+..++.|++.||.|||+.+++|+||||+||+++
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~  172 (304)
T cd05096          93 PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG  172 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEc
Confidence            999999999999999988542                    256678899999999999999999999999999999999


Q ss_pred             CCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhc
Q psy9736         124 LDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYL  203 (400)
Q Consensus       124 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (400)
                      .++.++|+|||  .+..........                                                       
T Consensus       173 ~~~~~kl~DfG--~~~~~~~~~~~~-------------------------------------------------------  195 (304)
T cd05096         173 ENLTIKIADFG--MSRNLYAGDYYR-------------------------------------------------------  195 (304)
T ss_pred             CCccEEECCCc--cceecccCceeE-------------------------------------------------------
Confidence            99999999999  333111000000                                                       


Q ss_pred             cccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee
Q psy9736         204 VGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL  283 (400)
Q Consensus       204 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  283 (400)
                                                                                    ......++..|+|||++.
T Consensus       196 --------------------------------------------------------------~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         196 --------------------------------------------------------------IQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             --------------------------------------------------------------ecCcCCCCccccCHHHHh
Confidence                                                                          011224567899999998


Q ss_pred             cCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHH---hCC--CCCcchhhhhcHHHHHHHHHhh
Q psy9736         284 DKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIA---TNK--KPEIKEKEKLSQIFQDFLDQCL  358 (400)
Q Consensus       284 ~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~---~~~--~~~~~~~~~~s~~~~dli~~~L  358 (400)
                      ...+...+|.||+|+++|||+++-.       ..||.. .+..+....+.   ...  ......+..++..+.+||.+||
T Consensus       214 ~~~~~~~~Dv~slG~~l~el~~~~~-------~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  285 (304)
T cd05096         214 MGKFTTASDVWAFGVTLWEILMLCK-------EQPYGE-LTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCW  285 (304)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHccC-------CCCCCc-CCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHc
Confidence            8878889999999999999986421       116655 33333332221   111  1111122346778999999999


Q ss_pred             hhhhhhhhcHHHHh
Q psy9736         359 EEEVETRASASLLL  372 (400)
Q Consensus       359 ~~dP~~R~s~~~~l  372 (400)
                      +.||++|||+.++.
T Consensus       286 ~~~p~~RPs~~~i~  299 (304)
T cd05096         286 SRDCRERPSFSDIH  299 (304)
T ss_pred             cCCchhCcCHHHHH
Confidence            99999999999994

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-32  Score=264.51  Aligned_cols=253  Identities=21%  Similarity=0.261  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~   74 (400)
                      +|.|+++.|+.+.+......|++|.+.... .....++.+|+.++++++|+||+++++++...     ...++++||+. 
T Consensus        13 lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-   91 (336)
T cd07849          13 IGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-   91 (336)
T ss_pred             EEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-
Confidence            588999999999888888889999876332 22346678899999999999999999886643     35899999995 


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +++...+..+.+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  ++..........      
T Consensus        92 ~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg--~~~~~~~~~~~~------  163 (336)
T cd07849          92 TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFG--LARIADPEHDHT------  163 (336)
T ss_pred             cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccc--ceeecccccccc------
Confidence            488888887789999999999999999999999999999999999999999999999999  333111100000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (336)
T cd07849         164 --------------------------------------------------------------------------------  163 (336)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    .......||+.|+|||.+.+ ..++..+|.||+|+++|+|++|..     
T Consensus       164 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~-----  208 (336)
T cd07849         164 ------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRP-----  208 (336)
T ss_pred             ------------------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCC-----
Confidence                                          00122367889999998754 445678999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHH---HhCC----------------------CCCcc---hhhhhcHHHHHHHHHhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLI---ATNK----------------------KPEIK---EKEKLSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i---~~~~----------------------~~~~~---~~~~~s~~~~dli~~~L~~dP~~R  365 (400)
                          ||.. .+.......+   ....                      .+..+   ...+.+..+.+||.+||+.||++|
T Consensus       209 ----~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  283 (336)
T cd07849         209 ----LFPG-KDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKR  283 (336)
T ss_pred             ----CCCC-CCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhC
Confidence                6643 2111111111   0000                      00000   012356789999999999999999


Q ss_pred             hcHHHHhcCccccccCC
Q psy9736         366 ASASLLLKHPFLKIARP  382 (400)
Q Consensus       366 ~s~~~~l~hp~~~~~~~  382 (400)
                      ||+.++++||||+....
T Consensus       284 pt~~e~l~hp~~~~~~~  300 (336)
T cd07849         284 ITVEEALAHPYLEQYHD  300 (336)
T ss_pred             cCHHHHhcCccccccCC
Confidence            99999999999986443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-32  Score=256.78  Aligned_cols=245  Identities=22%  Similarity=0.312  Sum_probs=190.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|++.+......|++|.+....  ....+.+.+|+.+++.++|+|++++++++..+...++++||++ ++|.
T Consensus         7 l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~   85 (283)
T cd07835           7 IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLK   85 (283)
T ss_pred             ecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHH
Confidence            588999999999887777888888876443  2233568899999999999999999999999999999999994 6898


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +++...   .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+.......  .       
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~--~~~~~~~~~--~-------  154 (283)
T cd07835          86 KYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFG--LARAFGVPV--R-------  154 (283)
T ss_pred             HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecc--cccccCCCc--c-------
Confidence            888654   48999999999999999999999999999999999999999999999999  332110000  0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (283)
T cd07835         155 --------------------------------------------------------------------------------  154 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......+++.|+|||++.+. .+...+|.|++|+++|+|++|..      
T Consensus       155 ------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~------  198 (283)
T cd07835         155 ------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRP------  198 (283)
T ss_pred             ------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCC------
Confidence                                          01112457789999988764 34577999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCC-------------------------CCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         315 FLIPYLFILSCRQALYLIATNK-------------------------KPEI-KEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~-------------------------~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                         ||.. .+....+..+.+..                         .... .....++..+.++|.+||+.||++|||+
T Consensus       199 ---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  274 (283)
T cd07835         199 ---LFPG-DSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA  274 (283)
T ss_pred             ---CCCC-CCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH
Confidence               7755 33333333332210                         0000 0113466789999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      ++++.||||
T Consensus       275 ~~il~~~~~  283 (283)
T cd07835         275 KAALQHPYF  283 (283)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.9e-32  Score=254.41  Aligned_cols=240  Identities=17%  Similarity=0.239  Sum_probs=191.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.|+++........|++|..... ....+.+.+|+.+++.++|+||+++++++..+...++++||+++++|.++
T Consensus        14 ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (263)
T cd05052          14 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY   92 (263)
T ss_pred             cCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHH
Confidence            68899999999988777788888887543 33456789999999999999999999999988999999999999999998


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........          
T Consensus        93 ~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~--~~~~~~~~~~~----------  160 (263)
T cd05052          93 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG--LSRLMTGDTYT----------  160 (263)
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCc--cccccccceee----------
Confidence            8642   58899999999999999999999999999999999999999999999999  33311100000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (263)
T cd05052         161 --------------------------------------------------------------------------------  160 (263)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||.+........+|.|++|+++|||++ |..        
T Consensus       161 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~--------  204 (263)
T cd05052         161 ----------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------  204 (263)
T ss_pred             ----------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCC--------
Confidence                                        0011234567999999888777788999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+.....+..  +...+..+.++|.+||..||++|||+.++++
T Consensus       205 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         205 -PYPG-IDLSQVYELLEKGYRMER--PEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             -CCCC-CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence             6655 444444444444433322  3457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-32  Score=252.63  Aligned_cols=245  Identities=21%  Similarity=0.283  Sum_probs=192.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHH-HhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVM-RENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|.++.||++.+...+..|++|.+.....   .....+..|..++ ...+|+|++++++++..+...++++||+++++
T Consensus         4 l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   83 (260)
T cd05611           4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGD   83 (260)
T ss_pred             CCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCC
Confidence            6899999999998877777888887753321   1122344555444 44589999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+.....            
T Consensus        84 L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~------------  149 (260)
T cd05611          84 CASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFG--LSRNGLE------------  149 (260)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecc--cceeccc------------
Confidence            9999876 468999999999999999999999999999999999999999999999999  3221000            


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (260)
T cd05611         150 --------------------------------------------------------------------------------  149 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                     .....|++.|+|||.+.+..+...+|.|++|+++|+|++|..       
T Consensus       150 -------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~-------  191 (260)
T cd05611         150 -------------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYP-------  191 (260)
T ss_pred             -------------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCC-------
Confidence                                           011246678999999888776788999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+..+... .......++..+.++|.+||+.||++||+   ++|+++||||++.
T Consensus       192 --p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         192 --PFHA-ETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             --CCCC-CCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence              7765 4555555555443221 11112246789999999999999999995   5799999999763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.6e-32  Score=263.24  Aligned_cols=253  Identities=21%  Similarity=0.235  Sum_probs=196.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~   73 (400)
                      +|.|.++.+|++.+......+++|.+....  ....+.+.+|+.+++.++|+||+++++++....     ..+++++|++
T Consensus         8 ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~   87 (330)
T cd07834           8 IGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME   87 (330)
T ss_pred             ecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh
Confidence            689999999999988878888998876443  334567889999999999999999999988764     7899999996


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       ++|.+.+.++ .+++..++.++.|++.|+.|||+.|++|+||||+||+++.++.++|+|||  .+.........     
T Consensus        88 -~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg--~~~~~~~~~~~-----  159 (330)
T cd07834          88 -TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFG--LARGVDPDEDE-----  159 (330)
T ss_pred             -hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccC--ceEeecccccc-----
Confidence             5888888754 78999999999999999999999999999999999999999999999999  33311111000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (330)
T cd07834         160 --------------------------------------------------------------------------------  159 (330)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                     ........+++.|+|||++.+. .....+|.|++|+++|+|++|..   
T Consensus       160 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~---  205 (330)
T cd07834         160 -------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKP---  205 (330)
T ss_pred             -------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCC---
Confidence                                           0001223578889999999887 66688999999999999999975   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCc-------------------------c---hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEI-------------------------K---EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-------------------------~---~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+..+....+........                         +   ....++..+.+||++||+.||+
T Consensus       206 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  278 (330)
T cd07834         206 ------LFPG-RDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPK  278 (330)
T ss_pred             ------CcCC-CCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChh
Confidence                  6655 333333333322110000                         0   0112567899999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++++++||||+....
T Consensus       279 ~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         279 KRITADEALAHPYLAQLHD  297 (330)
T ss_pred             hCCCHHHHHhCccHHhhcc
Confidence            9999999999999987444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.7e-32  Score=256.40  Aligned_cols=243  Identities=16%  Similarity=0.249  Sum_probs=191.5

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.|+++.    +......|++|.+..... ...+.+.+|+.++++++|+||+++++++..+...|++|||++++
T Consensus        13 lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   92 (283)
T cd05090          13 LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQG   92 (283)
T ss_pred             ccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCC
Confidence            6899999999876    455667888888864332 23367889999999999999999999999889999999999999


Q ss_pred             ChHHHHhh------------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhh
Q psy9736          76 SLTDVVTE------------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI  137 (400)
Q Consensus        76 ~L~~~i~~------------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~  137 (400)
                      +|.+++..                  ..+++..+..++.|++.|+.|||+++++|+||||+||+++.++.++++|||  .
T Consensus        93 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg--~  170 (283)
T cd05090          93 DLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG--L  170 (283)
T ss_pred             cHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccc--c
Confidence            99998842                  136788899999999999999999999999999999999999999999999  3


Q ss_pred             hhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccc
Q psy9736         138 ATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDS  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
                      +.........                                                                      
T Consensus       171 ~~~~~~~~~~----------------------------------------------------------------------  180 (283)
T cd05090         171 SREIYSADYY----------------------------------------------------------------------  180 (283)
T ss_pred             cccccCCcce----------------------------------------------------------------------
Confidence            3311110000                                                                      


Q ss_pred             ccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCcc
Q psy9736         218 YLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLT  297 (400)
Q Consensus       218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g  297 (400)
                                                                     .......++..|+|||++.+..+...+|.||+|
T Consensus       181 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  213 (283)
T cd05090         181 -----------------------------------------------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFG  213 (283)
T ss_pred             -----------------------------------------------ecccCCCccceecChHHhccCCCCchhhhHHHH
Confidence                                                           001222356779999999887777899999999


Q ss_pred             chhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         298 GSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       298 ~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +++|||++ |-.         ||.. .+.......+.......  .+..+++.+.+++.+||+.||++||++.+++++
T Consensus       214 ~il~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         214 VVLWEIFSFGLQ---------PYYG-FSNQEVIEMVRKRQLLP--CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHHHHcCCCC---------CCCC-CCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            99999998 654         7665 44555555555444333  244578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=4.4e-32  Score=255.64  Aligned_cols=246  Identities=20%  Similarity=0.307  Sum_probs=188.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHH---HHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILV---MRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~---l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||.|+++.||.+.+......||+|.+....   ......+..|..+   ++...|+||+++++.+...+..++|+||+.+
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g   81 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   81 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence            689999999998877666677777765332   1112223444443   4445899999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|...+.. +.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+...    ...     
T Consensus        82 ~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg--~~~~~----~~~-----  150 (278)
T cd05606          82 GDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG--LACDF----SKK-----  150 (278)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCc--Ccccc----Ccc-----
Confidence            999988865 468999999999999999999999999999999999999999999999999  32211    000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (278)
T cd05606         151 --------------------------------------------------------------------------------  150 (278)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......|+..|+|||++.+ ..++..+|.|++|+++|||++|..    
T Consensus       151 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~----  194 (278)
T cd05606         151 --------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS----  194 (278)
T ss_pred             --------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCC----
Confidence                                            0112257889999999874 345678999999999999999987    


Q ss_pred             cccccCcchhhc-HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILS-CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                           ||..... .............+.+  +..++..+.+++++||..||++|+     ++.++++||||+..
T Consensus       195 -----p~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~  261 (278)
T cd05606         195 -----PFRQHKTKDKHEIDRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL  261 (278)
T ss_pred             -----CCCCCCccchHHHHHHhhccCCCC--CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence                 8865321 1122222222222333  334688999999999999999999     99999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=3.3e-32  Score=257.97  Aligned_cols=246  Identities=20%  Similarity=0.237  Sum_probs=188.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhC-CCCCcccccceeEeCCE-----EEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMREN-KHPNIVNYLDSYLVGEE-----LWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~-----~~lv~e~~   72 (400)
                      ||.|.++.||++.+......|++|.......  ...+.+.+|+.+++.+ +|+||+++++++.....     .++++||+
T Consensus         9 lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~   88 (295)
T cd07837           9 IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYL   88 (295)
T ss_pred             ecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeecc
Confidence            6899999999998888888899998764432  2335678899999999 56999999999887655     89999999


Q ss_pred             CCCChHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhcccc
Q psy9736          73 PGGSLTDVVTE------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        73 ~~~~L~~~i~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      ++ +|.+++..      ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||  .+.......
T Consensus        89 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg--~~~~~~~~~  165 (295)
T cd07837          89 DS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG--LGRAFSIPV  165 (295)
T ss_pred             Cc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecc--cceecCCCc
Confidence            75 78887753      24799999999999999999999999999999999999998 8999999999  333110000


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (295)
T cd07837         166 --------------------------------------------------------------------------------  165 (295)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                             ...+...+++.|+|||++.+ ..+...+|.|++|+++|+|+
T Consensus       166 ---------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~  206 (295)
T cd07837         166 ---------------------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS  206 (295)
T ss_pred             ---------------------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH
Confidence                                                   00112245778999998865 33457899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCC--C----------------------CCcch-hhhhcHHHHHHHHHhhh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNK--K----------------------PEIKE-KEKLSQIFQDFLDQCLE  359 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~--~----------------------~~~~~-~~~~s~~~~dli~~~L~  359 (400)
                      +|..         ||.. .+....+..+.+..  +                      ..+.. ...++..+.+||.+||.
T Consensus       207 ~g~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  276 (295)
T cd07837         207 RKQP---------LFPG-DSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLR  276 (295)
T ss_pred             cCCC---------CCCC-CCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHcc
Confidence            9975         7765 34443333332210  0                      00000 12367789999999999


Q ss_pred             hhhhhhhcHHHHhcCcccc
Q psy9736         360 EEVETRASASLLLKHPFLK  378 (400)
Q Consensus       360 ~dP~~R~s~~~~l~hp~~~  378 (400)
                      .||++|||+.+++.||||+
T Consensus       277 ~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         277 YDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             CChhhcCCHHHHhcCCCcC
Confidence            9999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.9e-32  Score=255.45  Aligned_cols=243  Identities=15%  Similarity=0.214  Sum_probs=189.7

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|+|+++.||.+...     .....|++|.+.... ......+.+|+.+++.++|+||+++++++..+...++++||+++
T Consensus        14 ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~   93 (277)
T cd05062          14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR   93 (277)
T ss_pred             eccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCC
Confidence            588999999876532     234668888875432 22445688999999999999999999999988899999999999


Q ss_pred             CChHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET-----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...           .++...+..++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+.....
T Consensus        94 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg--~~~~~~~  171 (277)
T cd05062          94 GDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYE  171 (277)
T ss_pred             CCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCC--CccccCC
Confidence            9999988642           24677889999999999999999999999999999999999999999999  3331110


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       172 ~~~~~---------------------------------------------------------------------------  176 (277)
T cd05062         172 TDYYR---------------------------------------------------------------------------  176 (277)
T ss_pred             cceee---------------------------------------------------------------------------
Confidence            00000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......+++.|+|||++.+..++..+|.||+|+++|||
T Consensus       177 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  214 (277)
T cd05062         177 ------------------------------------------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  214 (277)
T ss_pred             ------------------------------------------cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHH
Confidence                                                      00112456789999999888888899999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++ |..         ||.. .+..+....+..+..+..  +...+..+.+++.+||+.||++|||+.|++++
T Consensus       215 ~~~~~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         215 ATLAEQ---------PYQG-MSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HcCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 554         6655 555555555555543333  33467789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-32  Score=248.93  Aligned_cols=244  Identities=31%  Similarity=0.477  Sum_probs=200.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.++.+.+......+++|.......  ...+.+.+|++++++++|+|++++++++..+...++++||+++++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   87 (254)
T cd06627           8 IGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLR   87 (254)
T ss_pred             EcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHH
Confidence            5889999999987777777788888765543  35577899999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++.. ..+++..+..++.|++.++.|||+.+++|+||+|+||+++.++.++|+|||  .+........           
T Consensus        88 ~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~--~~~~~~~~~~-----------  154 (254)
T cd06627          88 QIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFG--VATKLNDVSK-----------  154 (254)
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccc--cceecCCCcc-----------
Confidence            98875 478999999999999999999999999999999999999999999999999  3331111000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (254)
T cd06627         155 --------------------------------------------------------------------------------  154 (254)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......++..|+|||.+.+.......|.|++|+++|+|++|..         
T Consensus       155 ----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~---------  197 (254)
T cd06627         155 ----------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNP---------  197 (254)
T ss_pred             ----------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCC---------
Confidence                                        0122356778999998887766688999999999999999976         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      ||.. .+.......+.....+.+  +..++..+.+++.+||..+|++|||+.++++||||
T Consensus       198 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         198 PYYD-LNPMAALFRIVQDDHPPL--PEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             CCCC-ccHHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            7765 445555555554444433  33477899999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.5e-32  Score=257.54  Aligned_cols=246  Identities=21%  Similarity=0.242  Sum_probs=186.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|.++.||.+.+......+++|.+..... .....+.+|+.+++.++|+||+++++++..+...|+++||+. +++..
T Consensus        13 ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~   91 (291)
T cd07870          13 LGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQ   91 (291)
T ss_pred             EEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHH
Confidence            5889999999988777777788887754432 223457889999999999999999999999899999999995 57766


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+..  ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......            
T Consensus        92 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg--~~~~~~~~~------------  157 (291)
T cd07870          92 YMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFG--LARAKSIPS------------  157 (291)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccc--cccccCCCC------------
Confidence            6643  357888899999999999999999999999999999999999999999999  333110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (291)
T cd07870         158 --------------------------------------------------------------------------------  157 (291)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......+++.|+|||++.+. .+...+|.||+|+++|+|++|..        
T Consensus       158 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~--------  202 (291)
T cd07870         158 ---------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQP--------  202 (291)
T ss_pred             ---------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       001122467889999998763 34577899999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCC--------------------------CCCcch---hhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         317 IPYLFILSCRQALYLIATNK--------------------------KPEIKE---KEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~--------------------------~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                       ||.......+.+..+....                          +..+..   ....+..+.+++.+||..||++|||
T Consensus       203 -~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t  281 (291)
T cd07870         203 -AFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS  281 (291)
T ss_pred             -CCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC
Confidence             7765443333333322100                          000000   0112457899999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      +.+++.||||
T Consensus       282 ~~~~l~h~~~  291 (291)
T cd07870         282 AQDALLHPYF  291 (291)
T ss_pred             HHHHhcCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.98  E-value=7.4e-32  Score=250.77  Aligned_cols=242  Identities=16%  Similarity=0.214  Sum_probs=190.2

Q ss_pred             CCcceEEEEEec--CCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSS--DDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~--~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.||++  ........+++|.+.....  ...+.+.+|+.+++.+.|+||+++++++. +...++++||+++++
T Consensus         3 lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~   81 (257)
T cd05116           3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGP   81 (257)
T ss_pred             CCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCc
Confidence            689999999987  3445567788887754432  23567899999999999999999998875 456789999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. ..+++..+..++.|++.|+.|+|+++++|+||||.||+++.++.++|+|||  .+..........       
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg--~~~~~~~~~~~~-------  152 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFG--LSKALGADENYY-------  152 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCc--cccccCCCCCee-------
Confidence            9998865 468999999999999999999999999999999999999999999999999  433211110000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (257)
T cd05116         153 --------------------------------------------------------------------------------  152 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......+++.|+|||++....+...+|.||+|+++|||++ |..      
T Consensus       153 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~------  197 (257)
T cd05116         153 -----------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQK------  197 (257)
T ss_pred             -----------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCC------
Confidence                                         00111234678999999987777788999999999999997 765      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||.. .+..+....+.++..+.+  +..++..+.+||.+||+.||++||+++++..
T Consensus       198 ---p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         198 ---PYKG-MKGNEVTQMIESGERMEC--PQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             ---CCCC-CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence               7765 555566666655544433  3457889999999999999999999998853

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.98  E-value=8.2e-32  Score=253.86  Aligned_cols=242  Identities=17%  Similarity=0.257  Sum_probs=192.5

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+|+.||.+.     .......+++|..........+.+.+|+.+++.++|+||+++++++......++++||++++
T Consensus        13 lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   92 (280)
T cd05092          13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHG   92 (280)
T ss_pred             cCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCC
Confidence            6889999998874     23344567888776555556678999999999999999999999999888999999999999


Q ss_pred             ChHHHHhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          76 SLTDVVTET----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        76 ~L~~~i~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      +|.+++...                .+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.
T Consensus        93 ~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg--~~~  170 (280)
T cd05092          93 DLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFG--MSR  170 (280)
T ss_pred             CHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCC--cee
Confidence            999988642                37889999999999999999999999999999999999999999999999  332


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      .........                                                                       
T Consensus       171 ~~~~~~~~~-----------------------------------------------------------------------  179 (280)
T cd05092         171 DIYSTDYYR-----------------------------------------------------------------------  179 (280)
T ss_pred             EcCCCceee-----------------------------------------------------------------------
Confidence            110000000                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                    ......+++.|+|||.+.+..+...+|.||+|++
T Consensus       180 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (280)
T cd05092         180 ----------------------------------------------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV  213 (280)
T ss_pred             ----------------------------------------------cCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence                                                          0111234678999999988887888999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +|||++ |..         ||.. ....+....+..+.....  +..+++.+.+||.+||..||++||+++++++
T Consensus       214 l~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         214 LWEIFTYGKQ---------PWYQ-LSNTEAIECITQGRELER--PRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHHcCCCC---------CCcc-CCHHHHHHHHHcCccCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            999998 654         6655 555556666665544333  3347788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.98  E-value=6.7e-32  Score=257.39  Aligned_cols=249  Identities=20%  Similarity=0.297  Sum_probs=184.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCC--------EEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGE--------ELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--------~~~lv~e   70 (400)
                      +|.|.++.||++.+......|++|.+.....  .....+.+|+.++++++|+||+++++++....        ..++++|
T Consensus        20 lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e   99 (310)
T cd07865          20 IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFE   99 (310)
T ss_pred             eecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEc
Confidence            6899999999999888888899998754322  22345678999999999999999999876543        4699999


Q ss_pred             ccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          71 YLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        71 ~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      |+. +++.+.+...  .+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||  .+..........
T Consensus       100 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg--~~~~~~~~~~~~  176 (310)
T cd07865         100 FCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG--LARAFSLSKNSK  176 (310)
T ss_pred             CCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCC--CcccccCCcccC
Confidence            995 4887777654  68999999999999999999999999999999999999999999999999  333111100000


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (310)
T cd07865         177 --------------------------------------------------------------------------------  176 (310)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                         ........++..|+|||.+.+.. +...+|.|++|+++|+|++|.
T Consensus       177 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~  221 (310)
T cd07865         177 -----------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS  221 (310)
T ss_pred             -----------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCC
Confidence                                               00012235678899999876643 457899999999999999987


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHh---CCCCC-----------------------cch---hhhhcHHHHHHHHHhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIAT---NKKPE-----------------------IKE---KEKLSQIFQDFLDQCL  358 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~---~~~~~-----------------------~~~---~~~~s~~~~dli~~~L  358 (400)
                      .         ||.. .+.......+..   ..++.                       .+.   ....+..+.+||++||
T Consensus       222 ~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l  291 (310)
T cd07865         222 P---------IMQG-NTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL  291 (310)
T ss_pred             C---------CCCC-CCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHh
Confidence            5         5544 232222221111   10000                       000   0012457889999999


Q ss_pred             hhhhhhhhcHHHHhcCccc
Q psy9736         359 EEEVETRASASLLLKHPFL  377 (400)
Q Consensus       359 ~~dP~~R~s~~~~l~hp~~  377 (400)
                      ..||++|||++++|+||||
T Consensus       292 ~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         292 VLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cCChhhccCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.98  E-value=5.9e-32  Score=262.80  Aligned_cols=245  Identities=17%  Similarity=0.247  Sum_probs=188.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||+|+++.++.+.+.....+|++|.+....  ....+.+.+|+.++++++|+||+++++++...      ...+++++++
T Consensus        25 lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~  104 (345)
T cd07877          25 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  104 (345)
T ss_pred             eeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc
Confidence            689999999999888888889999876432  22346688999999999999999999988643      3478888887


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+.+....+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+....    ..    
T Consensus       105 -~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg--~~~~~~----~~----  173 (345)
T cd07877         105 -GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTD----DE----  173 (345)
T ss_pred             -ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccc--cccccc----cc----
Confidence             7799988887789999999999999999999999999999999999999999999999999  333110    00    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (345)
T cd07877         174 --------------------------------------------------------------------------------  173 (345)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....|++.|+|||++.+ ..+...+|.|++|+++|+|++|..   
T Consensus       174 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~---  216 (345)
T cd07877         174 ----------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---  216 (345)
T ss_pred             ----------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCC---
Confidence                                              111246778999998766 345578999999999999999976   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCC---------------------------CCcc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKK---------------------------PEIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~---------------------------~~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+.....                           ..+. .....+..+.+||.+||+.||.
T Consensus       217 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~  289 (345)
T cd07877         217 ------LFPG-TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD  289 (345)
T ss_pred             ------CCCC-CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChh
Confidence                  6644 222222222211100                           0000 0112467889999999999999


Q ss_pred             hhhcHHHHhcCcccccc
Q psy9736         364 TRASASLLLKHPFLKIA  380 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~  380 (400)
                      +|||+.++++||||+.-
T Consensus       290 ~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         290 KRITAAQALAHAYFAQY  306 (345)
T ss_pred             hcCCHHHHhcChhhhhc
Confidence            99999999999999963

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.98  E-value=1e-31  Score=254.31  Aligned_cols=249  Identities=16%  Similarity=0.229  Sum_probs=192.2

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++...     .....|++|.+..... .....+.+|+.+++.++|+||+++++++......+++|||+++
T Consensus        14 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   93 (288)
T cd05061          14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH   93 (288)
T ss_pred             ecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCC
Confidence            689999999986432     2345688887654432 2335678999999999999999999999988899999999999


Q ss_pred             CChHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET-----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...           ..+...+..++.|++.||.|||+++++||||||+||+++.++.++++|||  .+.....
T Consensus        94 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg--~~~~~~~  171 (288)
T cd05061          94 GDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIYE  171 (288)
T ss_pred             CCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCC--ccccccc
Confidence            9999998641           24567788999999999999999999999999999999999999999999  4331110


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      ....                                                                            
T Consensus       172 ~~~~----------------------------------------------------------------------------  175 (288)
T cd05061         172 TDYY----------------------------------------------------------------------------  175 (288)
T ss_pred             cccc----------------------------------------------------------------------------
Confidence            0000                                                                            


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                               .......++..|+|||.+.+..++..+|.|++|+++|||
T Consensus       176 -----------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el  214 (288)
T cd05061         176 -----------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI  214 (288)
T ss_pred             -----------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence                                                     001112345679999999887777889999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc------Ccc
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK------HPF  376 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~------hp~  376 (400)
                      ++ |..         ||.. .+..+....+..+.....  +...+..+.+++.+||+.||++|||+.++++      |||
T Consensus       215 ~~~~~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~  282 (288)
T cd05061         215 TSLAEQ---------PYQG-LSNEQVLKFVMDGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS  282 (288)
T ss_pred             HhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence            98 454         6655 455555555554433332  3345778999999999999999999999986      999


Q ss_pred             cccc
Q psy9736         377 LKIA  380 (400)
Q Consensus       377 ~~~~  380 (400)
                      |..+
T Consensus       283 ~~~~  286 (288)
T cd05061         283 FPEV  286 (288)
T ss_pred             CCCC
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.98  E-value=5.4e-32  Score=261.76  Aligned_cols=257  Identities=23%  Similarity=0.265  Sum_probs=193.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~   74 (400)
                      +|.|+++.|+.+.+......|++|.+....  ....+.+.+|+.+++.++|+||+++++++..    ....++++||+. 
T Consensus        13 lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-   91 (334)
T cd07855          13 IGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-   91 (334)
T ss_pred             eecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-
Confidence            588999999999888888889999876432  2234667889999999999999999998763    347899999995 


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........     
T Consensus        92 ~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg--~~~~~~~~~~~~-----  164 (334)
T cd07855          92 SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFG--MARGLSSSPTEH-----  164 (334)
T ss_pred             hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccc--cceeecccCcCC-----
Confidence            588888864 468999999999999999999999999999999999999999999999999  333111100000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (334)
T cd07855         165 --------------------------------------------------------------------------------  164 (334)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    ........|+..|+|||++.. ..+...+|.|++|+++|||++|..    
T Consensus       165 ------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~----  210 (334)
T cd07855         165 ------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQ----  210 (334)
T ss_pred             ------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCC----
Confidence                                          000122367889999998866 345578999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHh-----------------------C--CCCCcch---hhhhcHHHHHHHHHhhhhhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIAT-----------------------N--KKPEIKE---KEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~-----------------------~--~~~~~~~---~~~~s~~~~dli~~~L~~dP~~  364 (400)
                           ||.. .+....+..+..                       .  .....+.   ....+..+.++|++||+.||++
T Consensus       211 -----pf~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  284 (334)
T cd07855         211 -----LFPG-KNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEE  284 (334)
T ss_pred             -----ccCC-CChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhh
Confidence                 7654 222211111110                       0  0011110   1235788999999999999999


Q ss_pred             hhcHHHHhcCccccccCCCCC
Q psy9736         365 RASASLLLKHPFLKIARPLAS  385 (400)
Q Consensus       365 R~s~~~~l~hp~~~~~~~~~~  385 (400)
                      |||+++++.||||..-..+..
T Consensus       285 Rpt~~~~l~~~~~~~~~~~~~  305 (334)
T cd07855         285 RITVEQALQHPFLAQYHDPDD  305 (334)
T ss_pred             CcCHHHHHhChhhhhccCCcc
Confidence            999999999999987555443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.98  E-value=5.8e-32  Score=256.46  Aligned_cols=249  Identities=22%  Similarity=0.273  Sum_probs=190.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||.|.++.++++.+......|++|.+.....  ...+.+.+|+.++++++|+||+++++++..+...++|+||++ +++.
T Consensus        10 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~   88 (294)
T PLN00009         10 IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLK   88 (294)
T ss_pred             ecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHH
Confidence            5889999999998888888899998754322  233567899999999999999999999999999999999995 5787


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+...   .+++..+..++.|++.||.|||+++++|+||+|+||+++. ++.++++|||  .+........        
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg--~~~~~~~~~~--------  158 (294)
T PLN00009         89 KHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFG--LARAFGIPVR--------  158 (294)
T ss_pred             HHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccc--cccccCCCcc--------
Confidence            777542   3678889999999999999999999999999999999985 4678999999  3331110000        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (294)
T PLN00009        159 --------------------------------------------------------------------------------  158 (294)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     ......+++.|+|||++.+. .+...+|.|++|+++|+|++|..     
T Consensus       159 -------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~-----  202 (294)
T PLN00009        159 -------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKP-----  202 (294)
T ss_pred             -------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC-----
Confidence                                           01122467789999988663 34578999999999999999976     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCC-C------------------------Ccc-hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKK-P------------------------EIK-EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~-~------------------------~~~-~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                          ||.. .+..+...++..... +                        ... ....++..+.+++.+||+.||++||+
T Consensus       203 ----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps  277 (294)
T PLN00009        203 ----LFPG-DSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT  277 (294)
T ss_pred             ----CCCC-CCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC
Confidence                7765 344444444322100 0                        000 01235778999999999999999999


Q ss_pred             HHHHhcCccccccC
Q psy9736         368 ASLLLKHPFLKIAR  381 (400)
Q Consensus       368 ~~~~l~hp~~~~~~  381 (400)
                      +.++++||||...+
T Consensus       278 ~~~~l~~~~~~~~~  291 (294)
T PLN00009        278 ARAALEHEYFKDLG  291 (294)
T ss_pred             HHHHhcCchHhHHh
Confidence            99999999999754

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.98  E-value=1.1e-31  Score=250.70  Aligned_cols=243  Identities=14%  Similarity=0.220  Sum_probs=192.1

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|+|+|+.||++....   ....|++|.+..... ...+.+.+|+.++++++|+||+++++++..++..++++||+++++
T Consensus        12 lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~   91 (266)
T cd05033          12 IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGS   91 (266)
T ss_pred             ecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCC
Confidence            5889999999876543   245688887764432 234678899999999999999999999998889999999999999


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++..  +.+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+..........      
T Consensus        92 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg--~~~~~~~~~~~~------  163 (266)
T cd05033          92 LDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFG--LSRRLEDSEATY------  163 (266)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccc--hhhcccccccce------
Confidence            9999865  368999999999999999999999999999999999999999999999999  443221000000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (266)
T cd05033         164 --------------------------------------------------------------------------------  163 (266)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                     ......+++.|+|||.+....+...+|.|++|+++|++++ |..     
T Consensus       164 -------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~-----  207 (266)
T cd05033         164 -------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGER-----  207 (266)
T ss_pred             -------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCC-----
Confidence                                           0001134568999999988777789999999999999997 775     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||.. ....+....+..+.....  +.+++..+.+|+.+||+.+|++||++++++++
T Consensus       208 ----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         208 ----PYWD-MSNQDVIKAVEDGYRLPP--PMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                7765 445555555554433222  34578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.98  E-value=8.9e-32  Score=248.43  Aligned_cols=243  Identities=25%  Similarity=0.345  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.+|.+.+......+++|.+.....   ...+.+.+|+.+++.++|+||+++++.+..+...+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6899999999998777777888887654322   2345788999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..+..++.|++.|+.|+|+.+++|+||+|+||+++.++.++++|||  .+.......           
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~--~~~~~~~~~-----------  147 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFG--LAKELSSEG-----------  147 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecC--cceecccCC-----------
Confidence            9999765 68999999999999999999999999999999999999999999999999  332110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       148 --------------------------------------------------------------------------------  147 (250)
T cd05123         148 --------------------------------------------------------------------------------  147 (250)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......++..|+|||.+.+......+|.|++|+++|++++|..        
T Consensus       148 ----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~--------  191 (250)
T cd05123         148 ----------------------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP--------  191 (250)
T ss_pred             ----------------------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCC--------
Confidence                                        00122356778999999888777788999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH---HHHhcCccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA---SLLLKHPFL  377 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~---~~~l~hp~~  377 (400)
                       ||.. .+.......+..+. ..+  +...+..+.++|++||..||++||++   +++++||||
T Consensus       192 -p~~~-~~~~~~~~~~~~~~-~~~--~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         192 -PFYA-EDRKEIYEKILKDP-LRF--PEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             -CCCC-CCHHHHHHHHhcCC-CCC--CCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence             8755 34344444444432 222  33457889999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.98  E-value=7.9e-32  Score=253.84  Aligned_cols=245  Identities=23%  Similarity=0.308  Sum_probs=189.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.+|++.+......|++|.+..... ...+.+.+|+.++++++|+||+++++++...+..++++||+++ +|.+
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~   86 (284)
T cd07836           8 LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKK   86 (284)
T ss_pred             eccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHH
Confidence            5889999999999988888899998875532 2346678899999999999999999999999999999999975 8888


Q ss_pred             HHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTE----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++..    ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+........         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g--~~~~~~~~~~---------  155 (284)
T cd07836          87 YMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFG--LARAFGIPVN---------  155 (284)
T ss_pred             HHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecc--hhhhhcCCcc---------
Confidence            7764    258999999999999999999999999999999999999999999999999  3321110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (284)
T cd07836         156 --------------------------------------------------------------------------------  155 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ..+...+++.|+|||++.+. .+...+|.|++|+++|++++|..      
T Consensus       156 ------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~------  199 (284)
T cd07836         156 ------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRP------  199 (284)
T ss_pred             ------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC------
Confidence                                          01122467789999988664 34578999999999999999976      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC--------------------CCcch------hhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK--------------------PEIKE------KEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~--------------------~~~~~------~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                         ||... +..+....+.....                    +....      ....+..+.++|.+||+.||++||++
T Consensus       200 ---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~  275 (284)
T cd07836         200 ---LFPGT-NNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA  275 (284)
T ss_pred             ---CCCCC-CcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH
Confidence               66553 22222222221100                    00000      01246788999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      .++++||||
T Consensus       276 ~~~l~~~~f  284 (284)
T cd07836         276 HDALQHPWF  284 (284)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.98  E-value=4.9e-32  Score=263.13  Aligned_cols=248  Identities=19%  Similarity=0.259  Sum_probs=193.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCE------EEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE------LWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~------~~lv~e~~   72 (400)
                      ||.|.++.++.+.+......|++|.+...  .....+.+.+|+.++++++|+|++++.+++..+..      .++++||+
T Consensus        23 ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~  102 (343)
T cd07851          23 VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM  102 (343)
T ss_pred             eccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC
Confidence            58899999999988877788888887543  12234667889999999999999999988876544      89999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+++....+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||  .+......        
T Consensus       103 -~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg--~~~~~~~~--------  171 (343)
T cd07851         103 -GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG--LARHTDDE--------  171 (343)
T ss_pred             -CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccc--cccccccc--------
Confidence             6799999988889999999999999999999999999999999999999999999999999  33311000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (343)
T cd07851         172 --------------------------------------------------------------------------------  171 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....++..|+|||.+... .....+|.|++|+++|++++|..   
T Consensus       172 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~---  214 (343)
T cd07851         172 ----------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT---  214 (343)
T ss_pred             ----------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCC---
Confidence                                              1112456778889987653 44578999999999999999976   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCC---------------------------Ccc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKP---------------------------EIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~---------------------------~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+......                           .+. ....++..+.+||++||..||+
T Consensus       215 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~  287 (343)
T cd07851         215 ------LFPG-SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPD  287 (343)
T ss_pred             ------CCCC-CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChh
Confidence                  7755 3333433333322110                           000 0123578899999999999999


Q ss_pred             hhhcHHHHhcCccccccCCC
Q psy9736         364 TRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~~  383 (400)
                      +|||+.++++||||+....+
T Consensus       288 ~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         288 KRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             hCCCHHHHhcCCCccccCCC
Confidence            99999999999999875444

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.98  E-value=6.1e-32  Score=251.49  Aligned_cols=239  Identities=16%  Similarity=0.228  Sum_probs=195.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.||.+.+.. ...+++|.+........+.+.+|+.+++.++|+||+++++++......++++||+++++|.++
T Consensus        14 ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (261)
T cd05148          14 LGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAF   92 (261)
T ss_pred             hccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHH
Confidence            6899999999988776 677888887655554567789999999999999999999999999999999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+.....+...          
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g--~~~~~~~~~~~----------  160 (261)
T cd05148          93 LRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG--LARLIKEDVYL----------  160 (261)
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEcccc--chhhcCCcccc----------
Confidence            974   258999999999999999999999999999999999999999999999999  33311110000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (261)
T cd05148         161 --------------------------------------------------------------------------------  160 (261)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   .....++..|+|||++.+..+...+|.|++|+++|+|++ |..        
T Consensus       161 -----------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~--------  203 (261)
T cd05148         161 -----------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV--------  203 (261)
T ss_pred             -----------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC--------
Confidence                                         001134567899999888777788999999999999998 676        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+.+..+..+..+..  +...+..+.+++.+||+.||++|||+.++++
T Consensus       204 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         204 -PYPG-MNNHEVYDQITAGYRMPC--PAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             -CCCc-CCHHHHHHHHHhCCcCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             7765 555566666665533332  3457789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.98  E-value=4.7e-32  Score=255.62  Aligned_cols=246  Identities=24%  Similarity=0.335  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.|+++.+......+++|.......  ...+.+.+|+.+++.++|+||+++++++..+...++++||++++++.
T Consensus         9 lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   88 (286)
T cd07846           9 VGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLD   88 (286)
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHH
Confidence            6889999999998877777788887653322  23466889999999999999999999999999999999999988888


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+.... .+++..++.++.|++.|+.|||+.+++|+|++|+||+++.++.++++|||  .+.......            
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg--~~~~~~~~~------------  154 (286)
T cd07846          89 DLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFG--FARTLAAPG------------  154 (286)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeee--eeeeccCCc------------
Confidence            776543 68999999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (286)
T cd07846         155 --------------------------------------------------------------------------------  154 (286)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 ...+...++..|+|||++.+. .....+|.||+|+++|||++|..        
T Consensus       155 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~--------  199 (286)
T cd07846         155 ---------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEP--------  199 (286)
T ss_pred             ---------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCC--------
Confidence                                       001123467789999987653 34467999999999999999964        


Q ss_pred             cCcchhhcHHHHHHHHHhCC---------------------CCCcc-------hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         317 IPYLFILSCRQALYLIATNK---------------------KPEIK-------EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~---------------------~~~~~-------~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                       ||.. .+..+....+....                     .+...       ....++..+.+|+.+||+.+|++||++
T Consensus       200 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~  277 (286)
T cd07846         200 -LFPG-DSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS  277 (286)
T ss_pred             -CCCC-CchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH
Confidence             5543 23222222222100                     00000       012357789999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      .++++||||
T Consensus       278 ~~il~~~~~  286 (286)
T cd07846         278 SQLLHHEFF  286 (286)
T ss_pred             HHHhcCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.98  E-value=9.1e-32  Score=251.14  Aligned_cols=242  Identities=19%  Similarity=0.306  Sum_probs=192.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||.|.++.|+++.+......+++|.+....   ....+.+.+|+.+++.++|+||+++++++..++..++++||+++++|
T Consensus        10 ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   89 (267)
T cd08229          10 IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL   89 (267)
T ss_pred             hcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCH
Confidence            689999999999988788888998765322   22346788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++..     ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........      
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg--~~~~~~~~~~------  161 (267)
T cd08229          90 SRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG--LGRFFSSKTT------  161 (267)
T ss_pred             HHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcch--hhhccccCCc------
Confidence            998863     358999999999999999999999999999999999999999999999999  3331110000      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (267)
T cd08229         162 --------------------------------------------------------------------------------  161 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ......|+..|+|||++.+......+|.|++|+++|+|++|..    
T Consensus       162 ---------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~----  204 (267)
T cd08229         162 ---------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS----  204 (267)
T ss_pred             ---------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCC----
Confidence                                             0112257788999999988777788999999999999999987    


Q ss_pred             cccccCcchhhcH-HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSC-RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||...... ......+.....+..+ +..++..+.+++.+||..||++|||+.++++
T Consensus       205 -----p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         205 -----PFYGDKMNLYSLCKKIEQCDYPPLP-SDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             -----CcccccchHHHHhhhhhcCCCCCCC-cccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence                 88653322 2333333333222222 2347789999999999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.98  E-value=1e-31  Score=250.10  Aligned_cols=239  Identities=14%  Similarity=0.209  Sum_probs=190.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.||++... ...+|++|.+.... ...+.+.+|+.++++++|+||+++++.+..+...++++||+++++|.++
T Consensus        14 lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   91 (261)
T cd05072          14 LGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDF   91 (261)
T ss_pred             cCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHH
Confidence            689999999988754 33568888765433 2457789999999999999999999999988899999999999999998


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........           
T Consensus        92 l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg--~~~~~~~~~~-----------  158 (261)
T cd05072          92 LKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG--LARVIEDNEY-----------  158 (261)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCc--cceecCCCce-----------
Confidence            864   257888999999999999999999999999999999999999999999999  3331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (261)
T cd05072         159 --------------------------------------------------------------------------------  158 (261)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                 .......++..|+|||++....+...+|.|++|+++|+|++ |..        
T Consensus       159 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~--------  203 (261)
T cd05072         159 ---------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKI--------  203 (261)
T ss_pred             ---------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCC--------
Confidence                                       00111234567999999988777788999999999999998 766        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .........+.......  ....++..+.+++.+||..||++|||++++.+
T Consensus       204 -p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         204 -PYPG-MSNSDVMSALQRGYRMP--RMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence             7765 45555555555553322  23347789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.98  E-value=9.1e-32  Score=260.14  Aligned_cols=264  Identities=19%  Similarity=0.204  Sum_probs=195.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--------------HHHHHHHHHHHHhCCCCCcccccceeEeCCEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--------------KELIINEILVMRENKHPNIVNYLDSYLVGEELW   66 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--------------~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~   66 (400)
                      ||.|.++.|+++.+......|++|.+.......              ...+.+|+.++++++|+||+++++++..+...+
T Consensus        17 ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   96 (335)
T PTZ00024         17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFIN   96 (335)
T ss_pred             ccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEE
Confidence            689999999999888778888888775432211              124678999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          67 VVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        67 lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      ++|||+. ++|.+.+... .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+.......
T Consensus        97 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg--~~~~~~~~~  173 (335)
T PTZ00024         97 LVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG--LARRYGYPP  173 (335)
T ss_pred             EEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc--ceeeccccc
Confidence            9999996 5888888654 68999999999999999999999999999999999999999999999999  433221110


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ...                                                      ....+              .   
T Consensus       174 ~~~------------------------------------------------------~~~~~--------------~---  182 (335)
T PTZ00024        174 YSD------------------------------------------------------TLSKD--------------E---  182 (335)
T ss_pred             ccc------------------------------------------------------ccccc--------------c---
Confidence            000                                                      00000              0   


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~  304 (400)
                                                        ............+++.|+|||.+.+.. +...+|.|++|+++|+|+
T Consensus       183 ----------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~  228 (335)
T PTZ00024        183 ----------------------------------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL  228 (335)
T ss_pred             ----------------------------------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHH
Confidence                                              000001122335688999999987643 457899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhC---CCC---------------------Ccc-hhhhhcHHHHHHHHHhhh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATN---KKP---------------------EIK-EKEKLSQIFQDFLDQCLE  359 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~---~~~---------------------~~~-~~~~~s~~~~dli~~~L~  359 (400)
                      +|..         ||.. .+..+.+..+...   ...                     .+. .....+..+.+||.+||+
T Consensus       229 tg~~---------p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  298 (335)
T PTZ00024        229 TGKP---------LFPG-ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLK  298 (335)
T ss_pred             hCCC---------CCCC-CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcC
Confidence            9975         6655 4444444333221   000                     000 012346789999999999


Q ss_pred             hhhhhhhcHHHHhcCccccccCC
Q psy9736         360 EEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       360 ~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      .||++|||++++|.||||+....
T Consensus       299 ~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        299 LNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             CCchhccCHHHHhcCcccCCCCC
Confidence            99999999999999999996543

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.98  E-value=8.7e-32  Score=256.82  Aligned_cols=240  Identities=17%  Similarity=0.240  Sum_probs=187.1

Q ss_pred             CCcceEEEEEecCCCcee--EEEEecccccc-CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF--SKILSNPITLA-QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~--~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+|+.|+++.+....  ..+++|..... .....+.+.+|+.++.++ +|+||+++++++..++..++++||+++++
T Consensus        15 lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   94 (303)
T cd05088          15 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN   94 (303)
T ss_pred             ecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCc
Confidence            689999999999765433  44566665432 223446788999999999 89999999999999999999999999999


Q ss_pred             hHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          77 LTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        77 L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |.+++...                 .+++..++.++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  .+.
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg--~~~  172 (303)
T cd05088          95 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSR  172 (303)
T ss_pred             HHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccc--cCc
Confidence            99988632                 37889999999999999999999999999999999999999999999999  322


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      .    ....                                                                       
T Consensus       173 ~----~~~~-----------------------------------------------------------------------  177 (303)
T cd05088         173 G----QEVY-----------------------------------------------------------------------  177 (303)
T ss_pred             c----cchh-----------------------------------------------------------------------
Confidence            0    0000                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   .......++..|+|||.+....++..+|.||+|++
T Consensus       178 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  212 (303)
T cd05088         178 ---------------------------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  212 (303)
T ss_pred             ---------------------------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhH
Confidence                                                         00011123457999999888777788999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|||++ |..         ||.. .+..+....+..+....  .+...+..+.+|+.+||..+|++||++++++.+
T Consensus       213 l~ellt~g~~---------p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         213 LWEIVSLGGT---------PYCG-MTCAELYEKLPQGYRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HHHHHhcCCC---------Cccc-CChHHHHHHHhcCCcCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999997 765         7755 44444444444432222  233467789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.98  E-value=1e-31  Score=248.23  Aligned_cols=247  Identities=30%  Similarity=0.458  Sum_probs=202.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.++.+.+......|++|.......  ...+.+.+|+.++++++|+||+++++.+...  ...++++||+.+++
T Consensus         8 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~   87 (260)
T cd06606           8 LGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGS   87 (260)
T ss_pred             eeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCc
Confidence            5889999999998887888899988765542  3457789999999999999999999999888  88999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.|++.++.|||+.+++|+|++|+||+++.++.++|+|||  .+.........        
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~--~~~~~~~~~~~--------  157 (260)
T cd06606          88 LSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFG--CAKRLGDIETG--------  157 (260)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccc--cEEeccccccc--------
Confidence            99998765 78999999999999999999999999999999999999999999999999  22211000000        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (260)
T cd06606         158 --------------------------------------------------------------------------------  157 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   .......++..|+|||.+........+|.|++|+++|++++|..       
T Consensus       158 -----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~-------  201 (260)
T cd06606         158 -----------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP-------  201 (260)
T ss_pred             -----------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC-------
Confidence                                         00122357788999999988777788999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         316 LIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                        ||....+.......+... ..+.+  +..++..+.+||.+||+.||++||++.++++||||
T Consensus       202 --p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         202 --PWSELGNPMAALYKIGSSGEPPEI--PEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             --CCCCCCchHHHHHhccccCCCcCC--CcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence              887755455555555432 22222  34568899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.98  E-value=5.7e-32  Score=284.15  Aligned_cols=261  Identities=20%  Similarity=0.259  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+...+..||+|.+....   ....+++.+|+.++++++|+||+++++++..++..+++|||++|++|
T Consensus        10 LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL   89 (932)
T PRK13184         10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTL   89 (932)
T ss_pred             EecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCH
Confidence            689999999999988888889999876432   22356789999999999999999999999999999999999999999


Q ss_pred             HHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          78 TDVVTE------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        78 ~~~i~~------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      .+++..            ..++...+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.......
T Consensus        90 ~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFG--LAk~i~~~~  167 (932)
T PRK13184         90 KSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWG--AAIFKKLEE  167 (932)
T ss_pred             HHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecC--cceeccccc
Confidence            988753            124566788999999999999999999999999999999999999999999  444221111


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ....           +.                                                               
T Consensus       168 ~~~~-----------~l---------------------------------------------------------------  173 (932)
T PRK13184        168 EDLL-----------DI---------------------------------------------------------------  173 (932)
T ss_pred             cccc-----------cc---------------------------------------------------------------
Confidence            0000           00                                                               


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                 +.+.......+........||+.|+|||++.+..++..+|.||+|+++|||++
T Consensus       174 ---------------------------~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLT  226 (932)
T PRK13184        174 ---------------------------DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT  226 (932)
T ss_pred             ---------------------------ccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence                                       00000000000111234579999999999999888889999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |..         ||.. ..............+........+++.+.+++.+||..||++|++..+.+.+
T Consensus       227 G~~---------PF~~-~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        227 LSF---------PYRR-KKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             CCC---------CCCC-cchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            987         8866 2222222222222222222234577889999999999999999887776654

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.98  E-value=1.3e-31  Score=248.04  Aligned_cols=242  Identities=25%  Similarity=0.367  Sum_probs=199.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|++.+......+++|.+....  ......+.+|+.++++++|+||+++++++..+...++++||+++++|.
T Consensus         8 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   87 (256)
T cd08530           8 LGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLS   87 (256)
T ss_pred             ecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHH
Confidence            578999999998877777788888776432  234566789999999999999999999999999999999999999999


Q ss_pred             HHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          79 DVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        79 ~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +++.+     ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.......        
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g--~~~~~~~~~--------  157 (256)
T cd08530          88 KAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLG--ISKVLKKNM--------  157 (256)
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeecc--chhhhccCC--------
Confidence            98865     368999999999999999999999999999999999999999999999999  333111100        


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (256)
T cd08530         158 --------------------------------------------------------------------------------  157 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                       .....|++.|+|||.+.+..+...+|.|++|+++|+|++|..     
T Consensus       158 ---------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~-----  199 (256)
T cd08530         158 ---------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAP-----  199 (256)
T ss_pred             ---------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCC-----
Confidence                                             011246678999999888777778999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                          ||.. .+..+....+..+..+.+.  ..++..+.+++.+||..+|++|||+.++++||++
T Consensus       200 ----p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         200 ----PFEA-RSMQDLRYKVQRGKYPPIP--PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             ----CCCC-CCHHHHHHHHhcCCCCCCc--hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence                7766 4555555556655555443  3578899999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0586|consensus

Probab=99.98  E-value=2.2e-32  Score=267.54  Aligned_cols=255  Identities=22%  Similarity=0.269  Sum_probs=209.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|.|.+|.++...-+...||+|.+......  ..+.+.+|+++++.+.|||||+++.+..+...+|+||||+.++.++
T Consensus        64 ig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~  143 (596)
T KOG0586|consen   64 IGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELF  143 (596)
T ss_pred             eccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhH
Confidence            68999999999999999999999988755432  2355889999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++.+ +.+.+..++.++.|++.|++|||+++|+|||||.+||+++.+.+++|+|||  ...    .....         
T Consensus       144 ~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfg--fS~----~~~~~---------  208 (596)
T KOG0586|consen  144 DYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFG--FST----FFDYG---------  208 (596)
T ss_pred             HHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccc--cce----eeccc---------
Confidence            99975 478889999999999999999999999999999999999999999999999  222    11110         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (596)
T KOG0586|consen  209 --------------------------------------------------------------------------------  208 (596)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 ....+.||++.|.|||+..+..|. +..|.|++|.++|.+..|-.        
T Consensus       209 ---------------------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsL--------  253 (596)
T KOG0586|consen  209 ---------------------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSL--------  253 (596)
T ss_pred             ---------------------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccc--------
Confidence                                       113456899999999999998777 67899999999999999977        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhh
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI  390 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~  390 (400)
                       ||.+ .+-.+...+.+.+. ..+  +.-++-++.++|+++|..+|.+|+++++++.|.|.........+.+.+
T Consensus       254 -PFDG-~~lk~Lr~rvl~gk-~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~~~l~p~~  322 (596)
T KOG0586|consen  254 -PFDG-QNLKELRPRVLRGK-YRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEARLLAPLI  322 (596)
T ss_pred             -ccCC-cccccccchheeee-ecc--cceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhhhhhhccc
Confidence             8876 33333333333331 122  333677899999999999999999999999999998655444444444

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.98  E-value=8.5e-32  Score=250.41  Aligned_cols=240  Identities=19%  Similarity=0.248  Sum_probs=189.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.++.++.... ..+++|.+.... ...+.+.+|+.++++++|+||+++++++......+++|||+.+++|.++
T Consensus        12 lg~G~~~~vy~~~~~~~-~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (256)
T cd05113          12 LGTGQFGVVKYGKWRGQ-YDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNY   89 (256)
T ss_pred             ecCcccceEEEEEecCC-CcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHH
Confidence            68999999998865432 247788765332 3456789999999999999999999999888889999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.........           
T Consensus        90 i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g--~~~~~~~~~~~-----------  156 (256)
T cd05113          90 LREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFG--LSRYVLDDEYT-----------  156 (256)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCc--cceecCCCcee-----------
Confidence            8753  68999999999999999999999999999999999999999999999999  33311000000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd05113         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                 ......++..|+|||++....+...+|.|++|+++|+|++ |..         
T Consensus       157 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~---------  200 (256)
T cd05113         157 ---------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKM---------  200 (256)
T ss_pred             ---------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCC---------
Confidence                                       0001134567999999987777788999999999999998 765         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+..+....+..+..+..  +...+..+.+++.+||+.||++|||+.+++.+
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         201 PYER-FNNSETVEKVSQGLRLYR--PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CcCc-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            7765 444455555655544333  23367889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.98  E-value=1.7e-31  Score=248.64  Aligned_cols=242  Identities=16%  Similarity=0.219  Sum_probs=188.8

Q ss_pred             CCcceEEEEEecCCC--ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDR--RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~--~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+|+.||.+...  .....|++|....... ...+.+.+|+.++++++|+||+++++++. ....++|+||+++++|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence            689999999987432  3345678887765432 23466889999999999999999999876 4578999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.|+.|||+++++|+||||+||+++.++.++|+|||  .+..........       
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg--~~~~~~~~~~~~-------  152 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFG--LSKALGADDSYY-------  152 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCC--ccccccCCccce-------
Confidence            998864  368999999999999999999999999999999999999999999999999  333111110000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (257)
T cd05115         153 --------------------------------------------------------------------------------  152 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......+++.|+|||.+....++..+|.||+|+++||+++ |..      
T Consensus       153 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~------  197 (257)
T cd05115         153 -----------------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQK------  197 (257)
T ss_pred             -----------------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCC------
Confidence                                         00111133568999999888777788999999999999996 765      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||.. .........+.++..+..  +...++.+.++|.+||..||++||++.++++
T Consensus       198 ---p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         198 ---PYKK-MKGPEVMSFIEQGKRLDC--PAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             ---CcCc-CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence               7766 555666666666554433  3346789999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.8e-31  Score=250.57  Aligned_cols=242  Identities=15%  Similarity=0.216  Sum_probs=191.6

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+++.||.+.+..     ....|++|....... .....+.+|+.+++.++|+||+++++++..+...++++||+++
T Consensus        14 lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   93 (277)
T cd05032          14 LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAK   93 (277)
T ss_pred             ecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCC
Confidence            5899999999876653     337889998764432 3345688999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET-----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...           .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.....
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg--~~~~~~~  171 (277)
T cd05032          94 GDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG--MTRDIYE  171 (277)
T ss_pred             CCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc--cchhhcc
Confidence            9999988632           25778899999999999999999999999999999999999999999999  4331111


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      ....                                                                            
T Consensus       172 ~~~~----------------------------------------------------------------------------  175 (277)
T cd05032         172 TDYY----------------------------------------------------------------------------  175 (277)
T ss_pred             Cccc----------------------------------------------------------------------------
Confidence            0000                                                                            


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                               .......++..|+|||.+.+..+...+|.|++|+++||+
T Consensus       176 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  214 (277)
T cd05032         176 -----------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM  214 (277)
T ss_pred             -----------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence                                                     001122456789999998877777889999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++ |..         ||.. .+..+....+..+..+..  +..++..+.++|.+||..+|++|||+.++++
T Consensus       215 ~t~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         215 ATLAEQ---------PYQG-LSNEEVLKFVIDGGHLDL--PENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             hccCCC---------CCcc-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            98 654         6655 555555555555444333  3346889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.98  E-value=1.4e-32  Score=256.36  Aligned_cols=242  Identities=24%  Similarity=0.374  Sum_probs=189.6

Q ss_pred             CCcceEEEEEecCCC----ceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDR----RFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~----~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||.|.|+.|+.+...    .....|++|.++..... ..+.+.+|++.+++++|+||+++++++...+..++|+||++++
T Consensus         7 ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g   86 (259)
T PF07714_consen    7 IGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGG   86 (259)
T ss_dssp             EEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTE
T ss_pred             EccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence            589999999987655    55688999998654332 3688999999999999999999999999777899999999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +|.+++...   .+++..+..++.|++.||.|||+.+++|++|++.||+++.++.+||+|||  ............    
T Consensus        87 ~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~--~~~~~~~~~~~~----  160 (259)
T PF07714_consen   87 SLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFG--LSRPISEKSKYK----  160 (259)
T ss_dssp             BHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTT--TGEETTTSSSEE----
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccc----
Confidence            999999865   79999999999999999999999999999999999999999999999999  333220000000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (259)
T PF07714_consen  161 --------------------------------------------------------------------------------  160 (259)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~  311 (400)
                                                       ......+...|+|||.+....+...+|+||+|+++||+++ |..   
T Consensus       161 ---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~---  204 (259)
T PF07714_consen  161 ---------------------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKF---  204 (259)
T ss_dssp             ---------------------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSG---
T ss_pred             ---------------------------------cccccccccccccccccccccccccccccccccccccccccccc---
Confidence                                             0111235568899999988877789999999999999999 565   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                            ||.. .+..+....+.++.....  +..++..+.++|.+||..||++|||+.++++
T Consensus       205 ------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  205 ------PFSD-YDNEEIIEKLKQGQRLPI--PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             ------TTTT-SCHHHHHHHHHTTEETTS--BTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ------cccc-ccccccccccccccccee--ccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                  7766 566776777755544333  4457889999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.98  E-value=1.5e-31  Score=250.26  Aligned_cols=243  Identities=14%  Similarity=0.204  Sum_probs=188.7

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEE
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~   69 (400)
                      +|+|+|+.|+.+...   .....|++|.+.....  ...+.+.+|+.+++.++|+||+++++++....      ..++++
T Consensus         7 lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~   86 (273)
T cd05035           7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVIL   86 (273)
T ss_pred             cCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEE
Confidence            688999999887643   3447788888764432  23467899999999999999999998876544      379999


Q ss_pred             eccCCCChHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          70 EYLPGGSLTDVVTE-------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        70 e~~~~~~L~~~i~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      ||+++++|..++..       ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+....
T Consensus        87 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg--~~~~~~  164 (273)
T cd05035          87 PFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFG--LSKKIY  164 (273)
T ss_pred             eccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcc--ceeecc
Confidence            99999999988742       258999999999999999999999999999999999999999999999999  443111


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ......                                                                          
T Consensus       165 ~~~~~~--------------------------------------------------------------------------  170 (273)
T cd05035         165 SGDYYR--------------------------------------------------------------------------  170 (273)
T ss_pred             cccccc--------------------------------------------------------------------------
Confidence            000000                                                                          


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~  302 (400)
                                                                 ......++..|+|||.+....+...+|.||+|+++||
T Consensus       171 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~e  207 (273)
T cd05035         171 -------------------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE  207 (273)
T ss_pred             -------------------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHH
Confidence                                                       0011123567999999888777789999999999999


Q ss_pred             hcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         303 FLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       303 ~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |++ |..         ||.. ....+....+..+.....  +..++..+.+++++||+.||++|||+.+++++
T Consensus       208 l~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         208 IATRGQT---------PYPG-VENHEIYDYLRHGNRLKQ--PEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            998 664         6655 555555555555544433  34578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=1.4e-31  Score=259.28  Aligned_cols=250  Identities=18%  Similarity=0.243  Sum_probs=189.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~   73 (400)
                      +|.|+++.++.+.+......|++|.+...  .......+.+|+.+++.++|+||+++++++...     ...++++||+.
T Consensus        13 lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~   92 (337)
T cd07858          13 IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD   92 (337)
T ss_pred             eccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC
Confidence            68999999999998888888999987643  222345678899999999999999999988654     35899999995


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       ++|.+.+.. +.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  ++.......  .    
T Consensus        93 -~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg--~~~~~~~~~--~----  163 (337)
T cd07858          93 -TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG--LARTTSEKG--D----  163 (337)
T ss_pred             -CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCc--cccccCCCc--c----
Confidence             688888865 478999999999999999999999999999999999999999999999999  333110000  0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (337)
T cd07858         164 --------------------------------------------------------------------------------  163 (337)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ......++..|+|||.+.+ ..+...+|.|++|+++|+|++|..   
T Consensus       164 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~---  207 (337)
T cd07858         164 ---------------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP---  207 (337)
T ss_pred             ---------------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCC---
Confidence                                             0112246778999998765 345678999999999999999965   


Q ss_pred             ccccccCcchhhcHHHHHHHH---------------------------HhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLI---------------------------ATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i---------------------------~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||... +.......+                           .....+... ...+++..+.+||++||+.||+
T Consensus       208 ------pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  280 (337)
T cd07858         208 ------LFPGK-DYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS  280 (337)
T ss_pred             ------CCCCC-ChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence                  55431 111111111                           000011111 1134678899999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++++++||||.....
T Consensus       281 ~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         281 KRITVEEALAHPYLASLHD  299 (337)
T ss_pred             hccCHHHHHcCcchhhhcC
Confidence            9999999999999987444

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=1.9e-31  Score=248.99  Aligned_cols=246  Identities=25%  Similarity=0.431  Sum_probs=195.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc-----CcchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA-----QQPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      +|+|.++.+|.+.+......+++|.+...     .....+.+.+|+.++++++|+||+++++.+...  +.+++++||++
T Consensus        10 lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~   89 (264)
T cd06653          10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMP   89 (264)
T ss_pred             EccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCC
Confidence            58899999999988887888888876432     122346788999999999999999999988754  46889999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+.+.. +.+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+.........     
T Consensus        90 ~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg--~~~~~~~~~~~-----  162 (264)
T cd06653          90 GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG--ASKRIQTICMS-----  162 (264)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccc--ccccccccccc-----
Confidence            9999998875 468999999999999999999999999999999999999999999999999  33311000000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (264)
T cd06653         163 --------------------------------------------------------------------------------  162 (264)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     ........|+..|+|||.+.+......+|.|++|+++|++++|..    
T Consensus       163 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~----  207 (264)
T cd06653         163 -------------------------------GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP----  207 (264)
T ss_pred             -------------------------------CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC----
Confidence                                           000122357888999999988777788999999999999999976    


Q ss_pred             cccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                           ||.. ........++... ..+.+  +..++..+.++|++||. +|.+||++.++++|||.
T Consensus       208 -----p~~~-~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         208 -----PWAE-YEAMAAIFKIATQPTKPML--PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             -----CCCc-cCHHHHHHHHHcCCCCCCC--CcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence                 8876 4444444444433 23333  34578899999999999 67999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.98  E-value=8.5e-32  Score=257.54  Aligned_cols=133  Identities=22%  Similarity=0.368  Sum_probs=116.4

Q ss_pred             CCcceEEEEEecCCCc--eeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR--FFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~--~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      +|+|+++.|+++.+..  ....||+|.+....   ....+.+.+|+.++++++|+||+++++++...  ..+++|+||++
T Consensus         8 ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~   87 (316)
T cd07842           8 IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE   87 (316)
T ss_pred             eccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC
Confidence            6899999999999887  77888999887532   33446678999999999999999999999987  78999999996


Q ss_pred             CCChHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC----CCceEEeccc
Q psy9736          74 GGSLTDVVTE------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL----DGSVKLSKWN  134 (400)
Q Consensus        74 ~~~L~~~i~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~----~~~~~l~dfg  134 (400)
                      + ++.+.+..      ..+++..++.++.|++.|+.|||+.+++|+||||+||+++.    ++.++++|||
T Consensus        88 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          88 H-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             c-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            5 67666642      25889999999999999999999999999999999999999    8999999999

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.98  E-value=1.4e-31  Score=264.79  Aligned_cols=243  Identities=18%  Similarity=0.249  Sum_probs=187.0

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||.|+|+.||.+++.     ....+||+|.+..... ...+.+.+|+.+++++. |+||+++++++...+..++||||++
T Consensus        45 LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~  124 (400)
T cd05105          45 LGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCF  124 (400)
T ss_pred             ecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecC
Confidence            689999999987643     2345789998864332 23567899999999995 9999999999999899999999999


Q ss_pred             CCChHHHHhhc---------------------------------------------------------------------
Q psy9736          74 GGSLTDVVTET---------------------------------------------------------------------   84 (400)
Q Consensus        74 ~~~L~~~i~~~---------------------------------------------------------------------   84 (400)
                      +++|.+++...                                                                     
T Consensus       125 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (400)
T cd05105         125 YGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQ  204 (400)
T ss_pred             CCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcc
Confidence            99998877431                                                                     


Q ss_pred             ----------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchh
Q psy9736          85 ----------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF  136 (400)
Q Consensus        85 ----------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~  136 (400)
                                                  .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  
T Consensus       205 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfG--  282 (400)
T cd05105         205 RSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFG--  282 (400)
T ss_pred             cCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCC--
Confidence                                        26677888999999999999999999999999999999999999999999  


Q ss_pred             hhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecc
Q psy9736         137 IATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD  216 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (400)
                      ++.........                                                                     
T Consensus       283 la~~~~~~~~~---------------------------------------------------------------------  293 (400)
T cd05105         283 LARDIMHDSNY---------------------------------------------------------------------  293 (400)
T ss_pred             cceeccccccc---------------------------------------------------------------------
Confidence            33311100000                                                                     


Q ss_pred             cccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCc
Q psy9736         217 SYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGL  296 (400)
Q Consensus       217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~  296 (400)
                                                                      .......+++.|+|||++.+..+...+|+|++
T Consensus       294 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSl  325 (400)
T cd05105         294 ------------------------------------------------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSY  325 (400)
T ss_pred             ------------------------------------------------cccCCcCCCcceEChhhhcCCCCCchhhHHHH
Confidence                                                            00112246678999999988888889999999


Q ss_pred             cchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         297 TGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       297 g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+++|||++ |..         ||............+..+.....  +..++..+.+++.+||..||++|||+.++.+
T Consensus       326 Gvil~ellt~g~~---------P~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         326 GILLWEIFSLGGT---------PYPGMIVDSTFYNKIKSGYRMAK--PDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HHHHHHHHHCCCC---------CCcccchhHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            999999986 665         77653222233333333322222  3457888999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.98  E-value=8.4e-32  Score=253.28  Aligned_cols=243  Identities=17%  Similarity=0.267  Sum_probs=190.6

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|+|+++.||.+....     ....|++|....... .....+.+|+.+++.++|+||+++++++......++++||+++
T Consensus        14 lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g   93 (277)
T cd05036          14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAG   93 (277)
T ss_pred             CCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCC
Confidence            6889999999887766     677889998764432 2345689999999999999999999999888889999999999


Q ss_pred             CChHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC---ceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET--------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG---SVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~--------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~---~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...        .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++   .++++|||  .+.....
T Consensus        94 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg--~~~~~~~  171 (277)
T cd05036          94 GDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG--MARDIYR  171 (277)
T ss_pred             CCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCc--cccccCC
Confidence            9999988643        478899999999999999999999999999999999998765   58999999  4432100


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       172 ~~~~~---------------------------------------------------------------------------  176 (277)
T cd05036         172 ASYYR---------------------------------------------------------------------------  176 (277)
T ss_pred             cccee---------------------------------------------------------------------------
Confidence            00000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                .......+..|+|||++.+..+...+|.|++|+++|||
T Consensus       177 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (277)
T cd05036         177 ------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI  214 (277)
T ss_pred             ------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHH
Confidence                                                      00011234579999999888788899999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++ |..         ||.. .+..+....+........  +..++..+.+++++||+.||++|||+.++++|
T Consensus       215 ~~~g~~---------pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         215 FSLGYM---------PYPG-RTNQEVMEFVTGGGRLDP--PKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HcCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            97 765         7765 444444444444433222  34467889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=1.6e-31  Score=256.38  Aligned_cols=242  Identities=14%  Similarity=0.231  Sum_probs=187.5

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    +...+.+|++|.+.... ....+++.+|+.+++.++|+||+++++++..+ ..+++++|+++|
T Consensus        15 lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g   93 (316)
T cd05108          15 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFG   93 (316)
T ss_pred             eecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCC
Confidence            6899999998874    34455678999886443 23456788999999999999999999988764 577899999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........     
T Consensus        94 ~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG--~a~~~~~~~~~~-----  166 (316)
T cd05108          94 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFG--LAKLLGADEKEY-----  166 (316)
T ss_pred             CHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccc--ccccccCCCcce-----
Confidence            999998754  58889999999999999999999999999999999999999999999999  444221110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (316)
T cd05108         167 --------------------------------------------------------------------------------  166 (316)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......++..|+|||++.+..+...+|.||+|+++||+++ |..    
T Consensus       167 --------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~----  210 (316)
T cd05108         167 --------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----  210 (316)
T ss_pred             --------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCC----
Confidence                                            0011134567999999988888889999999999999987 765    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. ....+....+..+...  +.+...+..+.+++.+||..||++|||+.+++.+
T Consensus       211 -----p~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         211 -----PYDG-IPASEISSILEKGERL--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             -----CCCC-CCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 6655 3433333333333222  2233467789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=1.8e-31  Score=253.70  Aligned_cols=240  Identities=15%  Similarity=0.214  Sum_probs=187.6

Q ss_pred             CCcceEEEEEecCCCcee--EEEEecccccc-CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF--SKILSNPITLA-QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~--~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+++.|+.+......  ..+++|.+... .....+.+.+|+.+++++ +|+||+++++++...+..++++||+++++
T Consensus        10 lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~   89 (297)
T cd05089          10 IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGN   89 (297)
T ss_pred             ecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCc
Confidence            688999999887554432  34566665532 223446788999999999 79999999999998889999999999999


Q ss_pred             hHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          77 LTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        77 L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |.+++...                 .+++..++.++.|++.|+.|||+++++|+||||+||+++.++.++|+|||  ++.
T Consensus        90 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg--~~~  167 (297)
T cd05089          90 LLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFG--LSR  167 (297)
T ss_pred             HHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcC--CCc
Confidence            99988642                 37888999999999999999999999999999999999999999999999  332


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ..    ...                                                                       
T Consensus       168 ~~----~~~-----------------------------------------------------------------------  172 (297)
T cd05089         168 GE----EVY-----------------------------------------------------------------------  172 (297)
T ss_pred             cc----cce-----------------------------------------------------------------------
Confidence            00    000                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   .......++..|+|||++....+...+|.||+|++
T Consensus       173 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i  207 (297)
T cd05089         173 ---------------------------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL  207 (297)
T ss_pred             ---------------------------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHH
Confidence                                                         00011122456999999988888889999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|||++ |..         ||.. .+.......+..+..+..  +..++..+.+||.+||+.+|.+|||++++++.
T Consensus       208 l~el~t~g~~---------pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         208 LWEIVSLGGT---------PYCG-MTCAELYEKLPQGYRMEK--PRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HHHHHcCCCC---------CCCC-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999997 776         7766 555555555655533332  34578899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=9.6e-32  Score=252.25  Aligned_cols=263  Identities=21%  Similarity=0.273  Sum_probs=200.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|+|+++.+|.+.+......+++|.....   .....+.+.+|+.+++++. |+||+++++++..+...+++|||+++++
T Consensus         9 lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (280)
T cd05581           9 IGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGE   88 (280)
T ss_pred             ecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCc
Confidence            68999999999987777777777776432   2223466889999999998 9999999999999999999999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..++.++.|++.|+.+||+.+++|+|++|+||+++.++.++++|||  .+.............    
T Consensus        89 L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~--~~~~~~~~~~~~~~~----  162 (280)
T cd05581          89 LLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFG--TAKVLDPNSSPESNK----  162 (280)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCc--cccccCCccccccCC----
Confidence            99999765 79999999999999999999999999999999999999999999999999  433221111000000    


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                            ..+.                                                                      
T Consensus       163 ------~~~~----------------------------------------------------------------------  166 (280)
T cd05581         163 ------GDAT----------------------------------------------------------------------  166 (280)
T ss_pred             ------CCCc----------------------------------------------------------------------
Confidence                  0000                                                                      


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                         .................|+..|+|||++.+......+|.|++|++++++++|..       
T Consensus       167 -------------------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~-------  220 (280)
T cd05581         167 -------------------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP-------  220 (280)
T ss_pred             -------------------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCC-------
Confidence                               000000011122345578899999999988777788999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFL  377 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~  377 (400)
                        ||.. .+....+..+..... .+  +..+++.+.+||++||+.||++|||+    +++++||||
T Consensus       221 --p~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         221 --PFRG-SNEYLTFQKILKLEY-SF--PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             --CCCC-ccHHHHHHHHHhcCC-CC--CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence              7766 333333333333221 11  23467889999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=8.4e-32  Score=261.53  Aligned_cols=248  Identities=19%  Similarity=0.263  Sum_probs=191.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||.|.++.|+.+.+......|++|.+....  ....+.+.+|+.+++.++|+||+++++++..+.      .+++++||+
T Consensus        23 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~  102 (343)
T cd07880          23 VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM  102 (343)
T ss_pred             eeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC
Confidence            689999999999888888889999875332  223456889999999999999999999887553      468999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+++....+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+....    ..    
T Consensus       103 -~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg--~~~~~~----~~----  171 (343)
T cd07880         103 -GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG--LARQTD----SE----  171 (343)
T ss_pred             -CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc--cccccc----cC----
Confidence             7799988887789999999999999999999999999999999999999999999999999  332110    00    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (343)
T cd07880         172 --------------------------------------------------------------------------------  171 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....+++.|+|||++.+ ......+|.|++|+++|++++|..   
T Consensus       172 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~---  214 (343)
T cd07880         172 ----------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP---  214 (343)
T ss_pred             ----------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC---
Confidence                                              011245678888998765 334577899999999999999976   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCC---------------------------Ccc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKP---------------------------EIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~---------------------------~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+.......+.+....                           .+. ...+.+..+.++|.+||..||+
T Consensus       215 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  287 (343)
T cd07880         215 ------LFKG-HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAE  287 (343)
T ss_pred             ------CCCC-CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChh
Confidence                  6655 2322333222221100                           000 0124567899999999999999


Q ss_pred             hhhcHHHHhcCccccccCCC
Q psy9736         364 TRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~~  383 (400)
                      +|||+.+++.||||+..+..
T Consensus       288 ~R~t~~~~l~~~~~~~~~~~  307 (343)
T cd07880         288 SRITAAEALAHPYFEEFHDP  307 (343)
T ss_pred             hCCCHHHHhcCccHhhhcCc
Confidence            99999999999999975443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.1e-31  Score=248.14  Aligned_cols=239  Identities=15%  Similarity=0.237  Sum_probs=190.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.||++..... ..|++|.+.... ...+.+.+|+.++++++|+||+++++++..++..++++||+++++|.++
T Consensus        14 lg~g~~~~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   91 (261)
T cd05068          14 LGAGQFGEVWEGLWNNT-TPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY   91 (261)
T ss_pred             ecccCCccEEEEEecCC-eEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHH
Confidence            58899999988765443 468888876443 2456789999999999999999999999988999999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+..........         
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg--~~~~~~~~~~~~---------  160 (261)
T cd05068          92 LQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFG--LARVIKEDIYEA---------  160 (261)
T ss_pred             HhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcc--eEEEccCCcccc---------
Confidence            8653   48999999999999999999999999999999999999999999999999  443221000000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (261)
T cd05068         161 --------------------------------------------------------------------------------  160 (261)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   ......+..|+|||++....+...+|.||+|+++|||++ |..        
T Consensus       161 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~--------  203 (261)
T cd05068         161 -----------------------------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRM--------  203 (261)
T ss_pred             -----------------------------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCC--------
Confidence                                         000122357999999988877788999999999999998 776        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+.......  .+...+..+.+++.+||+.||++||++.++++
T Consensus       204 -p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         204 -PYPG-MTNAEVLQQVDQGYRMP--CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence             7765 55556666665553322  23457789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=3e-31  Score=247.81  Aligned_cols=235  Identities=16%  Similarity=0.205  Sum_probs=180.6

Q ss_pred             CCcceEEEEEecCC------------CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEE
Q psy9736           1 MKRGVTIDRFSSDD------------RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~~~~------------~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   68 (400)
                      ||.|.++.||.+..            .....+|++|..........+.+.+|+.+++.++|+||+++++++..+...+++
T Consensus         3 lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv   82 (262)
T cd05077           3 LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMV   82 (262)
T ss_pred             cccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEE
Confidence            68999999998862            234567899987766555566788999999999999999999999988889999


Q ss_pred             EeccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc-------eEEeccchhhhh
Q psy9736          69 MEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS-------VKLSKWNRFIAT  139 (400)
Q Consensus        69 ~e~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~-------~~l~dfg~~~~~  139 (400)
                      +||+++++|..++..  ..+++..+..++.|++.|+.|||+.+++||||||+||+++.++.       ++++|||  .+.
T Consensus        83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g--~~~  160 (262)
T cd05077          83 EEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG--IPI  160 (262)
T ss_pred             EecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC--CCc
Confidence            999999999888864  36899999999999999999999999999999999999987664       7899998  322


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ...                                                                             
T Consensus       161 ~~~-----------------------------------------------------------------------------  163 (262)
T cd05077         161 TVL-----------------------------------------------------------------------------  163 (262)
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            100                                                                             


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccc
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTG  298 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~  298 (400)
                                                                    ......++..|+|||.+.+ ..+...+|+|++|+
T Consensus       164 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  197 (262)
T cd05077         164 ----------------------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGT  197 (262)
T ss_pred             ----------------------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHH
Confidence                                                          0112246678999998863 44557899999999


Q ss_pred             hhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         299 SILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       299 ~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++|||+. |..         |+.. ....+. .....+... .  ....+..+.+||.+||+.||++||++.+++++
T Consensus       198 ~l~el~~~~~~---------p~~~-~~~~~~-~~~~~~~~~-~--~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         198 TLWEICYNGEI---------PLKD-KTLAEK-ERFYEGQCM-L--VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHhCCCC---------CCCC-cchhHH-HHHHhcCcc-C--CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            9999984 554         6554 222221 122222111 1  11134578999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=1.6e-31  Score=251.98  Aligned_cols=243  Identities=14%  Similarity=0.183  Sum_probs=191.5

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+++.||++...     .....|++|.+..... ...+.+.+|+.+++.++|+||+++++++......++++||+.+
T Consensus        13 lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~   92 (283)
T cd05091          13 LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSH   92 (283)
T ss_pred             hCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCC
Confidence            588999999987542     3346788888875433 2346688999999999999999999999988899999999999


Q ss_pred             CChHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhh
Q psy9736          75 GSLTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI  137 (400)
Q Consensus        75 ~~L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~  137 (400)
                      ++|.+++..                 ..+++..+..++.|++.||.|+|+++++||||||+||+++.++.++|+|||  +
T Consensus        93 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg--~  170 (283)
T cd05091          93 SDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLG--L  170 (283)
T ss_pred             CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccc--c
Confidence            999988742                 237888899999999999999999999999999999999999999999999  4


Q ss_pred             hhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccc
Q psy9736         138 ATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDS  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
                      +..........                                                                     
T Consensus       171 ~~~~~~~~~~~---------------------------------------------------------------------  181 (283)
T cd05091         171 FREVYAADYYK---------------------------------------------------------------------  181 (283)
T ss_pred             ccccccchhee---------------------------------------------------------------------
Confidence            33111100000                                                                     


Q ss_pred             ccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCcc
Q psy9736         218 YLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLT  297 (400)
Q Consensus       218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g  297 (400)
                                                                      ......+++.|+|||.+....+...+|.||+|
T Consensus       182 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  213 (283)
T cd05091         182 ------------------------------------------------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYG  213 (283)
T ss_pred             ------------------------------------------------eccCccCCccccCHHHHhcCCCCcchhHHHHH
Confidence                                                            01112456789999999877777889999999


Q ss_pred             chhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         298 GSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       298 ~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +++|||++ |..         ||.. ....+....+..+.....  +.+++..+.+|+.+||+.+|++||+++++++.
T Consensus       214 ~~l~el~~~g~~---------p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         214 VVLWEVFSYGLQ---------PYCG-YSNQDVIEMIRNRQVLPC--PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHHHHcCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            99999998 543         6555 555666666666654433  34578889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=2.1e-31  Score=252.43  Aligned_cols=243  Identities=18%  Similarity=0.270  Sum_probs=188.0

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|+|+++.|+++....     ....+++|.+.... ......+.+|+.+++.+ +|+||+++++++..++..+++|||++
T Consensus        20 ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~   99 (293)
T cd05053          20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAA   99 (293)
T ss_pred             ecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCC
Confidence            5889999998886542     33678888776432 22345688999999999 89999999999999899999999999


Q ss_pred             CCChHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchh
Q psy9736          74 GGSLTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF  136 (400)
Q Consensus        74 ~~~L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~  136 (400)
                      +++|..++..                 ..+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  
T Consensus       100 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg--  177 (293)
T cd05053         100 HGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFG--  177 (293)
T ss_pred             CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccc--
Confidence            9999998853                 247888999999999999999999999999999999999999999999999  


Q ss_pred             hhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecc
Q psy9736         137 IATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD  216 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (400)
                      .+..........                                                                    
T Consensus       178 ~~~~~~~~~~~~--------------------------------------------------------------------  189 (293)
T cd05053         178 LARDIHHIDYYR--------------------------------------------------------------------  189 (293)
T ss_pred             ccccccccccee--------------------------------------------------------------------
Confidence            333111000000                                                                    


Q ss_pred             cccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCc
Q psy9736         217 SYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGL  296 (400)
Q Consensus       217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~  296 (400)
                                                                       ......++..|+|||++....+...+|.||+
T Consensus       190 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  220 (293)
T cd05053         190 -------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSF  220 (293)
T ss_pred             -------------------------------------------------ccCCCCCCccccCHHHhccCCcCcccceeeh
Confidence                                                             0011124567999999988877888999999


Q ss_pred             cchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         297 TGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       297 g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |+++||+++ |..         ||.. ....+....+..+.....  +...+..+.+|+.+||..||++|||+.+++++
T Consensus       221 G~il~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         221 GVLLWEIFTLGGS---------PYPG-IPVEELFKLLKEGYRMEK--PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             hhHHHHHhcCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            999999987 654         6655 444444444444433222  33467789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.8e-31  Score=248.02  Aligned_cols=240  Identities=20%  Similarity=0.254  Sum_probs=188.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.|+.+.... ...+++|.+... ......+.+|+.+++.++|+||+++++++...+..++++||+++++|.++
T Consensus        12 lg~G~~~~v~~~~~~~-~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   89 (256)
T cd05059          12 LGSGQFGVVHLGKWRG-KIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNY   89 (256)
T ss_pred             hccCCCceEEEeEecC-CccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence            6889999999887643 446777776432 22445688999999999999999999999988899999999999999998


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+.........           
T Consensus        90 l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg--~~~~~~~~~~~-----------  156 (256)
T cd05059          90 LRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFG--LARYVLDDQYT-----------  156 (256)
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcc--cceeccccccc-----------
Confidence            8643  58999999999999999999999999999999999999999999999999  33311100000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd05059         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                 ......++..|+|||.+....+...+|.|++|+++||+++ |..         
T Consensus       157 ---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~---------  200 (256)
T cd05059         157 ---------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM---------  200 (256)
T ss_pred             ---------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCC---------
Confidence                                       0001123457999999988777788999999999999998 665         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+..+....+..+.....  +...+..+.+++.+||..+|++|||+.++++.
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         201 PYER-FSNSEVVESVSAGYRLYR--PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            7755 445555555555433222  33478899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.1e-31  Score=246.39  Aligned_cols=242  Identities=18%  Similarity=0.212  Sum_probs=190.1

Q ss_pred             CCcceEEEEEecCCCcee---EEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF---SKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~---~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.|+++......   ..+++|....... ...+.+.+|+.+++++.|+||+++++++. ....++++||+.+++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~   81 (257)
T cd05060           3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGP   81 (257)
T ss_pred             cCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCc
Confidence            689999999987544433   6788887764433 24567899999999999999999999876 456899999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.|++.|+.|||..+++|+||||+||+++.++.++|+|||  .+..........       
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~--~~~~~~~~~~~~-------  152 (257)
T cd05060          82 LLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG--MSRALGAGSDYY-------  152 (257)
T ss_pred             HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccc--ccceeecCCccc-------
Confidence            99999765 58999999999999999999999999999999999999999999999999  333111000000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (257)
T cd05060         153 --------------------------------------------------------------------------------  152 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......++..|+|||.+....+...+|.||+|+++|++++ |..      
T Consensus       153 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~------  197 (257)
T cd05060         153 -----------------------------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAK------  197 (257)
T ss_pred             -----------------------------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCC------
Confidence                                         00111134567999999988888889999999999999997 765      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||.. .+..+....+.......  .+..++..+.++|.+||..||++|||+.++++
T Consensus       198 ---p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         198 ---PYGE-MKGAEVIAMLESGERLP--RPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             ---Cccc-CCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence               7655 55555555555554332  24457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=2.1e-31  Score=247.25  Aligned_cols=243  Identities=18%  Similarity=0.209  Sum_probs=192.4

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.||++....   ....|++|.+..... ...+.+.+|+.++++++|+||+++++.+.. ...++++||+++++
T Consensus         3 ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~   81 (257)
T cd05040           3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGS   81 (257)
T ss_pred             CCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCc
Confidence            6889999999886543   334688898876654 456788999999999999999999999887 88999999999999


Q ss_pred             hHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          77 LTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        77 L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      |.+.+...   .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+..........     
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg--~~~~~~~~~~~~-----  154 (257)
T cd05040          82 LLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFG--LMRALPQNEDHY-----  154 (257)
T ss_pred             HHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccc--ccccccccccce-----
Confidence            99998753   48999999999999999999999999999999999999999999999999  443221100000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (257)
T cd05040         155 --------------------------------------------------------------------------------  154 (257)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                     .......++..|+|||.+....+...+|.|++|+++|||++ |..    
T Consensus       155 -------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~----  199 (257)
T cd05040         155 -------------------------------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEE----  199 (257)
T ss_pred             -------------------------------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCC----
Confidence                                           00012246678999999988877788999999999999998 876    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.. .+..+....+... ......+...+..+.+++.+||..+|++|||+.++++
T Consensus       200 -----p~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         200 -----PWAG-LSGSQILKKIDKE-GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             -----CCCC-CCHHHHHHHHHhc-CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                 7654 4555555555432 2222233456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=7.3e-32  Score=248.15  Aligned_cols=228  Identities=20%  Similarity=0.208  Sum_probs=179.4

Q ss_pred             ceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhh
Q psy9736           4 GVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE   83 (400)
Q Consensus         4 G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~   83 (400)
                      |+++.|+++.+......+++|.+.....     +.+|...+....|+||+++++++......+++|||+++++|.+.+..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            8899999999998888999999865432     33455555566799999999999999999999999999999998865


Q ss_pred             c-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccc
Q psy9736          84 T-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGT  162 (400)
Q Consensus        84 ~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (400)
                      . .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  ........                  
T Consensus        79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~--~~~~~~~~------------------  138 (237)
T cd05576          79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFS--RWSEVEDS------------------  138 (237)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeccc--chhccccc------------------
Confidence            3 68999999999999999999999999999999999999999999999999  22211000                  


Q ss_pred             eeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccc
Q psy9736         163 VYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTS  242 (400)
Q Consensus       163 ~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (400)
                                                                                                      
T Consensus       139 --------------------------------------------------------------------------------  138 (237)
T cd05576         139 --------------------------------------------------------------------------------  138 (237)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchh
Q psy9736         243 TSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFI  322 (400)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~  322 (400)
                                              .....++..|+|||.+.....+..+|.|++|+++|||++|..         |+...
T Consensus       139 ------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~---------~~~~~  185 (237)
T cd05576         139 ------------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKT---------LVECH  185 (237)
T ss_pred             ------------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcc---------hhhcC
Confidence                                    001134557999999887777788999999999999999964         33221


Q ss_pred             hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccc
Q psy9736         323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFL  377 (400)
Q Consensus       323 ~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~  377 (400)
                      ...      +....  .+..+..+++.+.+||++||+.||++|+++     +++++||||
T Consensus       186 ~~~------~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         186 PSG------INTHT--TLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             chh------ccccc--ccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            110      00011  111233467889999999999999999996     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=1.5e-31  Score=254.10  Aligned_cols=250  Identities=21%  Similarity=0.343  Sum_probs=196.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.++.+.+......|++|.+..... ...+.+..|+.++... .|+||+++++++..+...++++||+. +++.
T Consensus        23 lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~  101 (296)
T cd06618          23 IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLD  101 (296)
T ss_pred             eeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHH
Confidence            5889999999998887777888888764322 2345567788777666 59999999999999999999999994 4777


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+...  ..+++..+..++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||  .+..+.....         
T Consensus       102 ~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg--~~~~~~~~~~---------  170 (296)
T cd06618         102 KLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFG--ISGRLVDSKA---------  170 (296)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccc--cchhccCCCc---------
Confidence            66654  368999999999999999999997 599999999999999999999999999  3321110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (296)
T cd06618         171 --------------------------------------------------------------------------------  170 (296)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC----CCcccCCCCccchhhhhcCCCCccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN----KNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                     .....+++.|+|||.+....    +...+|.||+|+++|+|++|..   
T Consensus       171 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~---  216 (296)
T cd06618         171 -------------------------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQF---  216 (296)
T ss_pred             -------------------------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCC---
Confidence                                           01113567788899887553    4567899999999999999987   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                            ||.......+.+..+.....+.++....++..+.+||.+||..||++||+++++++|||++.-+.
T Consensus       217 ------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         217 ------PYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             ------CCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence                  88664455566666666655555444457889999999999999999999999999999997443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=2.5e-31  Score=247.52  Aligned_cols=245  Identities=14%  Similarity=0.180  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeE-eCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYL-VGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++..   ......+++|.+.... ....+.+.+|+.+++.++|+||+++++++. .++..++++||+.++
T Consensus         3 lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~   82 (262)
T cd05058           3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHG   82 (262)
T ss_pred             ccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCC
Confidence            68999999988753   3455778999875332 234567889999999999999999999765 455688999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  ..++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+..........     
T Consensus        83 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg--~~~~~~~~~~~~-----  155 (262)
T cd05058          83 DLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFG--LARDIYDKEYYS-----  155 (262)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCcc--ccccccCCccee-----
Confidence            999998753  46777888999999999999999999999999999999999999999999  433111100000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (262)
T cd05058         156 --------------------------------------------------------------------------------  155 (262)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ........++..|+|||.+....+...+|.|++|+++|||++|..     
T Consensus       156 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~-----  200 (262)
T cd05058         156 ------------------------------VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-----  200 (262)
T ss_pred             ------------------------------ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCC-----
Confidence                                          000111234668999999988877788999999999999999754     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          |+....+.......+..+..+..  +...+..+.+++.+||..+|++||++.++++
T Consensus       201 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         201 ----PPYPDVDSFDITVYLLQGRRLLQ--PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             ----CCCCCCCHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                44443566666656655544332  2346778999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=2.7e-31  Score=249.82  Aligned_cols=243  Identities=18%  Similarity=0.234  Sum_probs=183.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCC-CCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENK-HPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      +|.|.++.++++.+......+++|...... ........+|+.++.++. |+|++++++++..+  +..++++||++ ++
T Consensus         7 lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~   85 (282)
T cd07831           7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MN   85 (282)
T ss_pred             ccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-cc
Confidence            688999999999887777778888765432 222233457899999885 99999999999887  88999999996 48


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.+..  ..+++..++.++.|++.||.|||+.+++|+||+|+||+++. +.++|+|||  .+.......         
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg--~~~~~~~~~---------  153 (282)
T cd07831          86 LYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFG--SCRGIYSKP---------  153 (282)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecc--cccccccCC---------
Confidence            8877764  36899999999999999999999999999999999999999 999999999  332110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (282)
T cd07831         154 --------------------------------------------------------------------------------  153 (282)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     +.....+++.|+|||++.. ......+|.|++|+++|||++|..     
T Consensus       154 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~-----  197 (282)
T cd07831         154 -------------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP-----  197 (282)
T ss_pred             -------------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCc-----
Confidence                                           0111246778999997654 334578999999999999999965     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC---CCC--------------Ccc---------hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATN---KKP--------------EIK---------EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~---~~~--------------~~~---------~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                          ||.. .+..+....+...   ..+              ..+         ....++..+.+||.+||++||++|||
T Consensus       198 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  272 (282)
T cd07831         198 ----LFPG-TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT  272 (282)
T ss_pred             ----CCCC-CCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC
Confidence                6654 3333333332211   000              000         01235788999999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      ++++++||||
T Consensus       273 ~~~~l~~~~~  282 (282)
T cd07831         273 AKQALRHPYF  282 (282)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0614|consensus

Probab=99.97  E-value=4.1e-33  Score=266.02  Aligned_cols=245  Identities=21%  Similarity=0.280  Sum_probs=209.1

Q ss_pred             CCcceEEEEEecCCCc----eeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR----FFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~----~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||-|+|+.|-++.-+.    +|.|++ |+.+.-.....+.+..|-.+|...+.+.||++|..|.++..+|++||-|-||.
T Consensus       428 LGvGgFGRVELV~~~~~~~~fAlKil-kK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE  506 (732)
T KOG0614|consen  428 LGVGGFGRVELVKVNSQKATFALKIL-KKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE  506 (732)
T ss_pred             cccCccceEEEEEecccchHHHHHHH-hHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence            6889999987664433    333333 33334445566778999999999999999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +...++. +.|.+.+.++++..++.|++|||.+|||.||+||+|++++..|.+||.|||  .|.++...           
T Consensus       507 lWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFG--FAKki~~g-----------  573 (732)
T KOG0614|consen  507 LWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFG--FAKKIGSG-----------  573 (732)
T ss_pred             hhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehh--hHHHhccC-----------
Confidence            9998874 589999999999999999999999999999999999999999999999999  55533211           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       574 --------------------------------------------------------------------------------  573 (732)
T KOG0614|consen  574 --------------------------------------------------------------------------------  573 (732)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ....++||||.|+|||++.+.......|-|++|+.+||+|+|.-       
T Consensus       574 -----------------------------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p-------  617 (732)
T KOG0614|consen  574 -----------------------------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP-------  617 (732)
T ss_pred             -----------------------------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC-------
Confidence                                         12457899999999999999988889999999999999999974       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~  379 (400)
                        ||.. .+++..+..|+++- ..+..|.+++..+.+||+++...+|.+|..     +.|+-+|.||..
T Consensus       618 --PFs~-~dpmktYn~ILkGi-d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  618 --PFSG-VDPMKTYNLILKGI-DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             --CCCC-CchHHHHHHHHhhh-hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence              6666 99999999999983 334445678889999999999999999997     889999999985

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=2e-31  Score=251.04  Aligned_cols=246  Identities=23%  Similarity=0.315  Sum_probs=190.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.+|++.+...+..+++|.+....  ....+.+.+|+.+++.++|+|++++++++...  +..++++||+++ +
T Consensus         7 l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~   85 (287)
T cd07840           7 IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-D   85 (287)
T ss_pred             eccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-c
Confidence            588999999999888777788888887553  23345688999999999999999999999887  789999999965 8


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |..++...  .+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+........        
T Consensus        86 l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g--~~~~~~~~~~--------  155 (287)
T cd07840          86 LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFG--LARPYTKRNS--------  155 (287)
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEcccc--ceeeccCCCc--------
Confidence            88888654  68999999999999999999999999999999999999999999999999  3331110000        


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (287)
T cd07840         156 --------------------------------------------------------------------------------  155 (287)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    .......++..|+|||.+.+ ..+...+|.|++|+++|||++|..     
T Consensus       156 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~-----  200 (287)
T cd07840         156 ------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKP-----  200 (287)
T ss_pred             ------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCC-----
Confidence                                          00112245678999998765 345578999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCC-C------Cc-------------------ch-hhh-hcHHHHHHHHHhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKK-P------EI-------------------KE-KEK-LSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~-~------~~-------------------~~-~~~-~s~~~~dli~~~L~~dP~~R  365 (400)
                          ||.. .+....+..+..... +      .+                   .+ ..+ .+..+.+++++||..||++|
T Consensus       201 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  275 (287)
T cd07840         201 ----IFQG-STELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKR  275 (287)
T ss_pred             ----CCCC-CChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhC
Confidence                7655 333333333322100 0      00                   00 011 27789999999999999999


Q ss_pred             hcHHHHhcCccc
Q psy9736         366 ASASLLLKHPFL  377 (400)
Q Consensus       366 ~s~~~~l~hp~~  377 (400)
                      |++.++++||||
T Consensus       276 p~~~~~l~~~~~  287 (287)
T cd07840         276 ISADQALQHEYF  287 (287)
T ss_pred             cCHHHHhhCcCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.3e-31  Score=249.24  Aligned_cols=243  Identities=18%  Similarity=0.327  Sum_probs=190.0

Q ss_pred             CCcceEEEEEecCCCceeEEE---EeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKI---LSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~v---a~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.||++.+......+   ++|.+....  ......+.+|+.+++.++|+||+++++++......++++||++++
T Consensus         8 ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (260)
T cd08222           8 LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGR   87 (260)
T ss_pred             ecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCC
Confidence            689999999988776543333   333332221  223345678999999999999999999999888999999999999


Q ss_pred             ChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          76 SLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        76 ~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +|.+++..     ..+++..++.++.|++.|+.|||+.+++|+|++|+||+++. +.++++|||  .+........    
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g--~~~~~~~~~~----  160 (260)
T cd08222          88 DLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFG--VSRLLMGSCD----  160 (260)
T ss_pred             CHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccC--ceeecCCCcc----
Confidence            99988753     36899999999999999999999999999999999999975 669999999  3321100000    


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (260)
T cd08222         161 --------------------------------------------------------------------------------  160 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                         ......|++.|+|||.+.+..+...+|.|++|+++|+|++|..  
T Consensus       161 -----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~--  203 (260)
T cd08222         161 -----------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAH--  203 (260)
T ss_pred             -----------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC--
Confidence                                               0112356778999998877766678999999999999999976  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                             ||.. .+.......+..+..+.++  ..++..+.++|++||+.||++||++.++++||||
T Consensus       204 -------~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         204 -------AFEG-QNFLSVVLRIVEGPTPSLP--ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             -------CCCC-ccHHHHHHHHHcCCCCCCc--chhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                   7754 4555556666666555543  3578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=2.1e-31  Score=247.95  Aligned_cols=238  Identities=17%  Similarity=0.248  Sum_probs=188.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.||.+... ....+++|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++|||+++++|.++
T Consensus        14 ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~   90 (260)
T cd05070          14 LGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF   90 (260)
T ss_pred             eccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHH
Confidence            588999999988654 334578887764433 4567899999999999999999998875 4568899999999999998


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..++.++.+++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+..........         
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg--~~~~~~~~~~~~---------  159 (260)
T cd05070          91 LKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFG--LARLIEDNEYTA---------  159 (260)
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCce--eeeeccCccccc---------
Confidence            8642   48999999999999999999999999999999999999999999999999  333111000000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (260)
T cd05070         160 --------------------------------------------------------------------------------  159 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   .....++..|+|||++.+......+|.|++|+++|+|++ |..        
T Consensus       160 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~--------  202 (260)
T cd05070         160 -----------------------------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV--------  202 (260)
T ss_pred             -----------------------------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCC--------
Confidence                                         011124557999999887777788999999999999998 665        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+..+.....  +...+..+.+|+.+||..||++|||++++.+
T Consensus       203 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         203 -PYPG-MNNREVLEQVERGYRMPC--PQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence             7765 566666666665544333  3457789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=1.9e-31  Score=248.25  Aligned_cols=236  Identities=18%  Similarity=0.293  Sum_probs=182.2

Q ss_pred             CCcceEEEEEecCCCc-------eeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR-------FFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-------~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||.|+|+.||++....       ...+|++|..........+.+.+|+.+++.++|+|++++++++..+...+++|||++
T Consensus         3 lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (258)
T cd05078           3 LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVK   82 (258)
T ss_pred             CCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCC
Confidence            6899999999987643       345588888765544455778899999999999999999999999889999999999


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc--------eEEeccchhhhhhhcc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS--------VKLSKWNRFIATKLYI  143 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~--------~~l~dfg~~~~~~~~~  143 (400)
                      +++|..++...  .+++..+..++.|++.|+.|||+.+++||||||+||+++.++.        ++++|||  .+...  
T Consensus        83 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g--~~~~~--  158 (258)
T cd05078          83 FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG--ISITV--  158 (258)
T ss_pred             CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccc--ccccc--
Confidence            99999998753  4899999999999999999999999999999999999988765        5778877  22100  


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                        .                                                                             
T Consensus       159 --~-----------------------------------------------------------------------------  159 (258)
T cd05078         159 --L-----------------------------------------------------------------------------  159 (258)
T ss_pred             --C-----------------------------------------------------------------------------
Confidence              0                                                                             


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILE  302 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~  302 (400)
                                                                +.....+++.|+|||++.+. .+...+|.||+|+++||
T Consensus       160 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~  197 (258)
T cd05078         160 ------------------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWE  197 (258)
T ss_pred             ------------------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHH
Confidence                                                      01123467789999998863 34578999999999999


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |++|.-        .|+.. .++..... .... ...++.  ..+..+.+||.+||+.||++|||++++++.
T Consensus       198 l~~g~~--------~~~~~-~~~~~~~~-~~~~-~~~~~~--~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         198 IFSGGD--------KPLSA-LDSQKKLQ-FYED-RHQLPA--PKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHcCCC--------CChhh-ccHHHHHH-HHHc-cccCCC--CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            999842        14433 33333322 2222 222222  245679999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.2e-31  Score=260.36  Aligned_cols=247  Identities=21%  Similarity=0.295  Sum_probs=187.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      +|.|+++.|+++.+......|++|.+...  .....+.+.+|+.+++.++|+||+++++++...      ..+++++||+
T Consensus        23 ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~  102 (342)
T cd07879          23 VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYM  102 (342)
T ss_pred             eeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccc
Confidence            58899999999988777788888877532  222345678999999999999999999988754      2569999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      . .++..... ..+++..+..++.|++.|+.|||+.+++||||+|+||+++.++.++|+|||  ++.....    .    
T Consensus       103 ~-~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg--~~~~~~~----~----  170 (342)
T cd07879         103 Q-TDLQKIMG-HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFG--LARHADA----E----  170 (342)
T ss_pred             c-cCHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCC--CCcCCCC----C----
Confidence            5 47766553 358999999999999999999999999999999999999999999999999  3321100    0    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (342)
T cd07879         171 --------------------------------------------------------------------------------  170 (342)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....+++.|+|||++.+ ..+...+|.||+|+++|||++|..   
T Consensus       171 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~---  213 (342)
T cd07879         171 ----------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKT---  213 (342)
T ss_pred             ----------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCC---
Confidence                                              111246778999998866 345578999999999999999976   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCC----------------------CCcch------hhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKK----------------------PEIKE------KEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~----------------------~~~~~------~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+.....                      +..+.      ....+..+.+||++||+.||+
T Consensus       214 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  286 (342)
T cd07879         214 ------LFKG-KDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVD  286 (342)
T ss_pred             ------CCCC-CCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChh
Confidence                  7765 333333333222100                      00000      113566789999999999999


Q ss_pred             hhhcHHHHhcCccccccCCC
Q psy9736         364 TRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~~  383 (400)
                      +||++++++.||||+..+..
T Consensus       287 ~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         287 KRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             hCcCHHHHhcCcchhhcccc
Confidence            99999999999999986553

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.3e-31  Score=247.05  Aligned_cols=234  Identities=20%  Similarity=0.284  Sum_probs=188.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.|+.+...  ...|++|....... ..+++.+|+.++++++|+||+++++++......++++||+++++|.++
T Consensus        14 ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   90 (256)
T cd05039          14 IGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDY   90 (256)
T ss_pred             eecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHH
Confidence            588999999988765  46788898865544 567789999999999999999999999988899999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.......            
T Consensus        91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g--~~~~~~~~~------------  156 (256)
T cd05039          91 LRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFG--LAKEASQGQ------------  156 (256)
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccc--ccccccccc------------
Confidence            8753   58999999999999999999999999999999999999999999999999  333110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd05039         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                    ....++..|+|||.+....+...+|.|++|+++||+++ |..        
T Consensus       157 ------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~--------  198 (256)
T cd05039         157 ------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV--------  198 (256)
T ss_pred             ------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCC--------
Confidence                                          01123456889998887767778999999999999997 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+..+.....  +..+++.+.++|++||..+|++|||+.++++
T Consensus       199 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         199 -PYPR-IPLKDVVPHVEKGYRMEA--PEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             -CCCC-CCHHHHHHHHhcCCCCCC--ccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence             6655 444444444444433333  3346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=3.2e-31  Score=250.89  Aligned_cols=249  Identities=20%  Similarity=0.281  Sum_probs=190.7

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEecccccc----CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLA----QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      +|.|+++.+|.+.+.   ..+..|++|.+...    .....+.+.+|+.+++++ +|+||+++++.+..+...++++||+
T Consensus         8 lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (290)
T cd05613           8 LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYI   87 (290)
T ss_pred             eccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecC
Confidence            578888888876543   34556777766432    122346678999999999 6999999999999989999999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  ++........     
T Consensus        88 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg--~~~~~~~~~~-----  160 (290)
T cd05613          88 NGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG--LSKEFHEDEV-----  160 (290)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCc--cceecccccc-----
Confidence            99999998865 468999999999999999999999999999999999999999999999999  3331110000     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (290)
T cd05613         161 --------------------------------------------------------------------------------  160 (290)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC--CCCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK--NKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                       .......|+..|+|||.+...  ......|.|++|+++|+|++|.. 
T Consensus       161 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~-  206 (290)
T cd05613         161 ---------------------------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGAS-  206 (290)
T ss_pred             ---------------------------------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCC-
Confidence                                             001123577889999998753  23467899999999999999987 


Q ss_pred             ccccccccCcchhh---cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccccC
Q psy9736         310 SFQPHFLIPYLFIL---SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIAR  381 (400)
Q Consensus       310 s~g~~~~~P~~~~~---~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~~  381 (400)
                              ||....   ........+....+ ..  +..++..+.+|+++||+.||++|+     ++++++.||||+...
T Consensus       207 --------p~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         207 --------PFTVDGEKNSQAEISRRILKSEP-PY--PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             --------CCCcCCccccHHHHHHHhhccCC-CC--CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence                    775321   22333333333322 22  234678899999999999999997     899999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=2.6e-31  Score=249.04  Aligned_cols=239  Identities=17%  Similarity=0.236  Sum_probs=187.6

Q ss_pred             CCcceEEEEEecCCCcee--EEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF--SKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~--~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.|+.+......  ..+++|...... ....+.+.+|+.+++++ +|+||+++++++...+..+++|||+++++
T Consensus         3 lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (270)
T cd05047           3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN   82 (270)
T ss_pred             CCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCc
Confidence            689999999998765543  356777765322 23456788999999999 89999999999999889999999999999


Q ss_pred             hHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          77 LTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        77 L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |.+++...                 .+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  ++.
T Consensus        83 L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfg--l~~  160 (270)
T cd05047          83 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSR  160 (270)
T ss_pred             HHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCC--Ccc
Confidence            99998642                 37889999999999999999999999999999999999999999999999  322


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      .    ....                                                                       
T Consensus       161 ~----~~~~-----------------------------------------------------------------------  165 (270)
T cd05047         161 G----QEVY-----------------------------------------------------------------------  165 (270)
T ss_pred             c----cchh-----------------------------------------------------------------------
Confidence            0    0000                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   ........+..|+|||++....+...+|.||+|++
T Consensus       166 ---------------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i  200 (270)
T cd05047         166 ---------------------------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  200 (270)
T ss_pred             ---------------------------------------------hhccCCCCccccCChHHHccCCCCchhhHHHHHHH
Confidence                                                         00011123457999999888777788999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +|||++ |..         ||.. .+..+....+..+.....  +...+..+.+|+.+||..||.+|||+++++.
T Consensus       201 l~el~~~g~~---------pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         201 LWEIVSLGGT---------PYCG-MTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHcCCCC---------Cccc-cCHHHHHHHHhCCCCCCC--CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            999996 776         7755 444455555554433222  3346778999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=3.6e-31  Score=244.73  Aligned_cols=240  Identities=17%  Similarity=0.234  Sum_probs=188.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|+|+++.||++... ....+++|....... .....+.+|+.++++++|+||+++++++......+++|||+++++|.+
T Consensus         3 ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           3 LGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             cCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            689999999988743 456788887654432 234568899999999999999999999998899999999999999999


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++...  .+++..+..++.+++.++.|+|+.+++|+||+|+||+++.++.++++|||  .+.........          
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g--~~~~~~~~~~~----------  149 (250)
T cd05085          82 FLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFG--MSRQEDDGIYS----------  149 (250)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCc--cceeccccccc----------
Confidence            88643  57899999999999999999999999999999999999999999999999  33211000000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (250)
T cd05085         150 --------------------------------------------------------------------------------  149 (250)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++....+...+|.|++|+++|++++ |..        
T Consensus       150 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~--------  193 (250)
T cd05085         150 ----------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVC--------  193 (250)
T ss_pred             ----------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCC--------
Confidence                                        0011133567999999988777788999999999999998 665        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .........+..+....  .+..++..+.+++.+||..+|++|||+.++++
T Consensus       194 -p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         194 -PYPG-MTNQQAREQVEKGYRMS--CPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence             7765 44444445554443322  23447789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.4e-31  Score=249.97  Aligned_cols=245  Identities=24%  Similarity=0.327  Sum_probs=192.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|.+........+++|......  ....+.+.+|+.+++.++|+|++++++++...+..++++||++ ++|.
T Consensus         7 ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~   85 (282)
T cd07829           7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLK   85 (282)
T ss_pred             ccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHH
Confidence            688999999999998888889999887653  2334667889999999999999999999999899999999996 5899


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++...  .+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........          
T Consensus        86 ~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g--~~~~~~~~~~----------  153 (282)
T cd07829          86 KYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFG--LARAFGIPLR----------  153 (282)
T ss_pred             HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCC--cccccCCCcc----------
Confidence            999765  79999999999999999999999999999999999999999999999999  3331110000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (282)
T cd07829         154 --------------------------------------------------------------------------------  153 (282)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......++..|+|||++.+. .....+|.|++|+++||+++|..       
T Consensus       154 -----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~-------  197 (282)
T cd07829         154 -----------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKP-------  197 (282)
T ss_pred             -----------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCC-------
Confidence                                         01112345679999988765 56678999999999999999965       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCC--------------------CC-----c-chhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         316 LIPYLFILSCRQALYLIATNKK--------------------PE-----I-KEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~--------------------~~-----~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                        ||.. .+....+..+.+...                    +.     . .....++..+.++|++||+.||++||++.
T Consensus       198 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~  274 (282)
T cd07829         198 --LFPG-DSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAK  274 (282)
T ss_pred             --CCCC-ccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHH
Confidence              6654 333333333322100                    00     0 00112466899999999999999999999


Q ss_pred             HHhcCccc
Q psy9736         370 LLLKHPFL  377 (400)
Q Consensus       370 ~~l~hp~~  377 (400)
                      ++++||||
T Consensus       275 ~~l~~p~~  282 (282)
T cd07829         275 EALKHPYF  282 (282)
T ss_pred             HHhhCcCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=3.1e-31  Score=251.47  Aligned_cols=246  Identities=15%  Similarity=0.221  Sum_probs=188.0

Q ss_pred             CCcceEEEEEecCCCce----------------eEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCC
Q psy9736           1 MKRGVTIDRFSSDDRRF----------------FSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGE   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~----------------~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   63 (400)
                      +|+|+|+.|+.+.+...                ...|++|.+..... ...+.+.+|+.++++++|+||+++++++..++
T Consensus        13 lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   92 (296)
T cd05051          13 LGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDP   92 (296)
T ss_pred             ccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCC
Confidence            68999999998765442                25578888765432 34567889999999999999999999999989


Q ss_pred             EEEEEEeccCCCChHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEe
Q psy9736          64 ELWVVMEYLPGGSLTDVVTET------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS  131 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~  131 (400)
                      ..++++||+++++|.+++...            .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++++
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~  172 (296)
T cd05051          93 PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIA  172 (296)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEc
Confidence            999999999999999988653            48899999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+.........                                                                
T Consensus       173 dfg--~~~~~~~~~~~----------------------------------------------------------------  186 (296)
T cd05051         173 DFG--MSRNLYSSDYY----------------------------------------------------------------  186 (296)
T ss_pred             ccc--ceeecccCcce----------------------------------------------------------------
Confidence            999  33211100000                                                                


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                           .......+++.|+|||++....+...+
T Consensus       187 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~  213 (296)
T cd05051         187 -----------------------------------------------------RVQGRAPLPIRWMAWESVLLGKFTTKS  213 (296)
T ss_pred             -----------------------------------------------------eecCcCCCCceecCHHHhhcCCCCccc
Confidence                                                                 001122456789999998887777899


Q ss_pred             CCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhC-----CCCCcchhhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         292 PPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN-----KKPEIKEKEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       292 d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~-----~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                      |.|++|+++|||+++...       .||.. .+....+..+...     .....+.+...+..+.+++.+||+.||++||
T Consensus       214 Dv~slG~~l~el~~~~~~-------~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  285 (296)
T cd05051         214 DVWAFGVTLWEILTLCRE-------QPYEH-LTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRP  285 (296)
T ss_pred             hhhhhHHHHHHHHhcCCC-------CCCCC-cChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCC
Confidence            999999999999874221       16644 3334444433322     1122222334667899999999999999999


Q ss_pred             cHHHHhc
Q psy9736         367 SASLLLK  373 (400)
Q Consensus       367 s~~~~l~  373 (400)
                      |+.++++
T Consensus       286 t~~el~~  292 (296)
T cd05051         286 TFREIHL  292 (296)
T ss_pred             CHHHHHH
Confidence            9999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=3.1e-31  Score=252.90  Aligned_cols=243  Identities=17%  Similarity=0.261  Sum_probs=188.5

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|.|+++.|+.+.     ....+.+|++|.+.... ....+.+.+|+.+++++ +|+||+++++++...+..++++||+.
T Consensus        43 ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~  122 (302)
T cd05055          43 LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCC  122 (302)
T ss_pred             eeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCC
Confidence            5889999998875     34556789999876442 22346789999999999 79999999999998899999999999


Q ss_pred             CCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          74 GGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        74 ~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++|.+++...   .+++.++..++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+.........   
T Consensus       123 ~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg--~~~~~~~~~~~---  197 (302)
T cd05055         123 YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFG--LARDIMNDSNY---  197 (302)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCc--ccccccCCCce---
Confidence            99999998753   38999999999999999999999999999999999999999999999999  33311100000   


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       198 --------------------------------------------------------------------------------  197 (302)
T cd05055         198 --------------------------------------------------------------------------------  197 (302)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKW  309 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~w  309 (400)
                                                        .......+++.|+|||++.+..+...+|.|++|+++|||++ |.. 
T Consensus       198 ----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~-  242 (302)
T cd05055         198 ----------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSN-  242 (302)
T ss_pred             ----------------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCC-
Confidence                                              00111235678999999988877788999999999999998 655 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                              ||............+..+..+.  .+...+..+.+|+.+||..+|++|||+.++++
T Consensus       243 --------p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         243 --------PYPGMPVDSKFYKLIKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             --------CcCCCCchHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                    7765332222222233332222  22346778999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.1e-31  Score=245.30  Aligned_cols=241  Identities=19%  Similarity=0.268  Sum_probs=191.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.+|++.+.. ...|++|.+...... ..+.+.+|++++++++|+||+++++++......++++||+.+++|.+
T Consensus         3 lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           3 IGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             cccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            6899999999988766 777888877654433 45778999999999999999999999999999999999999999999


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++..  ..+++..+..++.+++.++.|||+.+++|+||+|+||+++.++.++|+|||  .+..........         
T Consensus        82 ~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g--~~~~~~~~~~~~---------  150 (251)
T cd05041          82 FLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFG--MSREEEGGIYTV---------  150 (251)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecc--ccccccCCccee---------
Confidence            8864  357899999999999999999999999999999999999999999999999  333110000000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       151 --------------------------------------------------------------------------------  150 (251)
T cd05041         151 --------------------------------------------------------------------------------  150 (251)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||.+.+..+...+|.|++|+++|+|++ |..        
T Consensus       151 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~--------  194 (251)
T cd05041         151 ----------------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDT--------  194 (251)
T ss_pred             ----------------------------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCC--------
Confidence                                        0011123567999999888777788999999999999998 665        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .........+..+...  ..+...+..+.+++.+||..+|++|||+.++++
T Consensus       195 -p~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         195 -PYPG-MSNQQTRERIESGYRM--PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             -CCcc-CCHHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence             6655 4444444444443222  224457789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=3.4e-31  Score=256.64  Aligned_cols=244  Identities=18%  Similarity=0.260  Sum_probs=185.5

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||.|+|+.||.+..     ..+...|++|.+.... ....+.+.+|+.+++++ +|+||+++++++... ..+++++||+
T Consensus        15 lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~   94 (337)
T cd05054          15 LGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYC   94 (337)
T ss_pred             cccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecC
Confidence            68999999998853     3344678888876432 22345678899999999 899999999987654 5788999999


Q ss_pred             CCCChHHHHhh--------------------------------------------------------------cCCCHHH
Q psy9736          73 PGGSLTDVVTE--------------------------------------------------------------TCMDEGQ   90 (400)
Q Consensus        73 ~~~~L~~~i~~--------------------------------------------------------------~~l~~~~   90 (400)
                      ++++|.+++..                                                              ..+++..
T Consensus        95 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  174 (337)
T cd05054          95 KFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLED  174 (337)
T ss_pred             CCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHH
Confidence            99999988752                                                              1478888


Q ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhc
Q psy9736          91 IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESS  170 (400)
Q Consensus        91 ~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~  170 (400)
                      +..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+..+.......                      
T Consensus       175 ~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG--~a~~~~~~~~~~----------------------  230 (337)
T cd05054         175 LISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFG--LARDIYKDPDYV----------------------  230 (337)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccc--cchhcccCcchh----------------------
Confidence            99999999999999999999999999999999999999999999  443221111000                      


Q ss_pred             cCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCC
Q psy9736         171 TGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLS  250 (400)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (400)
                                                                                                      
T Consensus       231 --------------------------------------------------------------------------------  230 (337)
T cd05054         231 --------------------------------------------------------------------------------  230 (337)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHH
Q psy9736         251 TPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQAL  329 (400)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~  329 (400)
                                     ......++..|+|||++.+..+...+|.||+|+++|||++ |..         ||..........
T Consensus       231 ---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~---------p~~~~~~~~~~~  286 (337)
T cd05054         231 ---------------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS---------PYPGVQIDEEFC  286 (337)
T ss_pred             ---------------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCC---------CCCCCCccHHHH
Confidence                           0122345678999999999888899999999999999997 765         775522222222


Q ss_pred             HHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         330 YLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       330 ~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ..+..+.....  +...++.+.+++.+||+.+|++||++.++++|
T Consensus       287 ~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         287 RRLKEGTRMRA--PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHHhccCCCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            22222222222  33467889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.97  E-value=2.2e-31  Score=249.27  Aligned_cols=243  Identities=14%  Similarity=0.196  Sum_probs=187.1

Q ss_pred             CCcceEEEEEecCCCcee--EEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFF--SKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~--~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e   70 (400)
                      +|+|+|+.||++......  .++++|.+...  .....+.+.+|+.+++.++|+||+++++.+...      ...++++|
T Consensus         7 ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e   86 (272)
T cd05075           7 LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILP   86 (272)
T ss_pred             cCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEE
Confidence            689999999988654443  46888876543  233457788999999999999999999876422      25689999


Q ss_pred             ccCCCChHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          71 YLPGGSLTDVVTE-------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        71 ~~~~~~L~~~i~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      |+++++|.+++..       ..+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||  .+.....
T Consensus        87 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~  164 (272)
T cd05075          87 FMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFG--LSKKIYN  164 (272)
T ss_pred             eCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCC--cccccCc
Confidence            9999999887731       247899999999999999999999999999999999999999999999999  4431110


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       165 ~~~~~---------------------------------------------------------------------------  169 (272)
T cd05075         165 GDYYR---------------------------------------------------------------------------  169 (272)
T ss_pred             cccee---------------------------------------------------------------------------
Confidence            00000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......+++.|+|||.+....+...+|.|++|+++|||
T Consensus       170 ------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el  207 (272)
T cd05075         170 ------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEI  207 (272)
T ss_pred             ------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHH
Confidence                                                      01112345679999999888788899999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++ |..         ||.. ....+....+..+.....  +..++..+.++|.+||..||++|||+++++++
T Consensus       208 ~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         208 ATRGQT---------PYPG-VENSEIYDYLRQGNRLKQ--PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HcCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            98 554         7655 455555555555543322  33477889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=4e-31  Score=249.35  Aligned_cols=244  Identities=17%  Similarity=0.193  Sum_probs=183.4

Q ss_pred             CCcceEEEEEec----CCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSS----DDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~----~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      +|+|+++.|+++    ........|++|.+..... ...+.+.+|+.++++++|+||+++++++...  ...+++|||++
T Consensus        12 lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~   91 (283)
T cd05080          12 LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVP   91 (283)
T ss_pred             cccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCC
Confidence            689999999653    3444556788887764432 2456788999999999999999999987653  46899999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +++|.+++....+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+..........     
T Consensus        92 ~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg--~~~~~~~~~~~~-----  164 (283)
T cd05080          92 LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFG--LAKAVPEGHEYY-----  164 (283)
T ss_pred             CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecc--cccccCCcchhh-----
Confidence            9999999988789999999999999999999999999999999999999999999999999  433111100000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (283)
T cd05080         165 --------------------------------------------------------------------------------  164 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     .......++..|+|||.+.+......+|.||+|+++|||++|..     
T Consensus       165 -------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~-----  208 (283)
T cd05080         165 -------------------------------RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD-----  208 (283)
T ss_pred             -------------------------------ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC-----
Confidence                                           00011234567999999988777789999999999999999964     


Q ss_pred             ccccCcchhhcHHH--------------HHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQ--------------ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~--------------~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          |+........              ....+..+.  ..+.+..++..+.+++.+||+.||++|||++++++
T Consensus       209 ----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         209 ----SKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM--RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             ----CCCCCcchhhhhhcccccccchhhhhhhhhcCC--CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                5433211111              011111111  11123446789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=5.2e-31  Score=255.12  Aligned_cols=253  Identities=24%  Similarity=0.293  Sum_probs=190.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhC-CCCCcccccceeEeC--CEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMREN-KHPNIVNYLDSYLVG--EELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e~~~~~   75 (400)
                      +|+|+++.++++.+......+++|.+...  .....+.+.+|+.+++++ +|+||+++++++...  ...++|+||++ +
T Consensus        15 lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~   93 (337)
T cd07852          15 LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-T   93 (337)
T ss_pred             hcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-c
Confidence            68999999999988777778888876432  222345577899999999 999999999988643  36899999996 5


Q ss_pred             ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          76 SLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        76 ~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +|...+..+.+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+..........       
T Consensus        94 ~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g--~~~~~~~~~~~~-------  164 (337)
T cd07852          94 DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG--LARSLSELEENP-------  164 (337)
T ss_pred             CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeecc--chhccccccccc-------
Confidence            99998887778999999999999999999999999999999999999999999999999  443221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (337)
T cd07852         165 --------------------------------------------------------------------------------  164 (337)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                 .........||+.|+|||++.. ..+...+|.|++|+++|+|++|..      
T Consensus       165 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~------  211 (337)
T cd07852         165 ---------------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKP------  211 (337)
T ss_pred             ---------------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCC------
Confidence                                       0001223467889999998765 344578999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhC---------------------------CCCCcch-hhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         315 FLIPYLFILSCRQALYLIATN---------------------------KKPEIKE-KEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~---------------------------~~~~~~~-~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                         ||.. .+.......+...                           ....... ..+++..+.+||.+||+.||++||
T Consensus       212 ---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp  287 (337)
T cd07852         212 ---LFPG-TSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRL  287 (337)
T ss_pred             ---CCCC-CChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCccccc
Confidence               6654 2222222222111                           0000000 112577899999999999999999


Q ss_pred             cHHHHhcCcccccc
Q psy9736         367 SASLLLKHPFLKIA  380 (400)
Q Consensus       367 s~~~~l~hp~~~~~  380 (400)
                      |+.++++|||++..
T Consensus       288 s~~~il~~~~~~~~  301 (337)
T cd07852         288 TAEEALEHPYVAQF  301 (337)
T ss_pred             CHHHHhhChhhhhh
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.1e-31  Score=251.00  Aligned_cols=246  Identities=14%  Similarity=0.235  Sum_probs=185.2

Q ss_pred             CCcceEEEEEecCCCce--------------eEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEE
Q psy9736           1 MKRGVTIDRFSSDDRRF--------------FSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL   65 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~--------------~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~   65 (400)
                      ||+|+|+.||.+.....              ...|++|.+.... ....+.+.+|++++++++|+|++++++++..+...
T Consensus        13 lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   92 (295)
T cd05097          13 LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPL   92 (295)
T ss_pred             cCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcc
Confidence            68999999999876543              2357888876542 22346789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHhhc-------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEec
Q psy9736          66 WVVMEYLPGGSLTDVVTET-------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        66 ~lv~e~~~~~~L~~~i~~~-------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      +++|||+++++|.+++...             .+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++|+|
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~d  172 (295)
T cd05097          93 CMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIAD  172 (295)
T ss_pred             EEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecc
Confidence            9999999999999988542             267888999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceee
Q psy9736         133 WNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIV  212 (400)
Q Consensus       133 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (400)
                      ||  .+..........                                                                
T Consensus       173 fg--~~~~~~~~~~~~----------------------------------------------------------------  186 (295)
T cd05097         173 FG--MSRNLYSGDYYR----------------------------------------------------------------  186 (295)
T ss_pred             cc--cccccccCccee----------------------------------------------------------------
Confidence            99  333111000000                                                                


Q ss_pred             eecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccC
Q psy9736         213 NYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTP  292 (400)
Q Consensus       213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d  292 (400)
                                                                           ......+++.|+|||++.+..++..+|
T Consensus       187 -----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D  213 (295)
T cd05097         187 -----------------------------------------------------IQGRAVLPIRWMAWESILLGKFTTASD  213 (295)
T ss_pred             -----------------------------------------------------ccCcCcCceeecChhhhccCCcCchhh
Confidence                                                                 011224567899999998887788999


Q ss_pred             CCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHh-----CCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         293 PTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIAT-----NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       293 ~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                      .||+|+++|+|+++..       ..||.. .+..+....+..     +.......+...++.+.+|+++||+.||++|||
T Consensus       214 vwSlG~~l~el~~~~~-------~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs  285 (295)
T cd05097         214 VWAFGVTLWEMFTLCK-------EQPYSL-LSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPT  285 (295)
T ss_pred             HHHHHHHHHHHHHcCC-------CCCCcc-cChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence            9999999999987421       126554 333333332221     111111223336778999999999999999999


Q ss_pred             HHHHhc
Q psy9736         368 ASLLLK  373 (400)
Q Consensus       368 ~~~~l~  373 (400)
                      ++++++
T Consensus       286 ~~~i~~  291 (295)
T cd05097         286 FNKIHH  291 (295)
T ss_pred             HHHHHH
Confidence            999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0576|consensus

Probab=99.97  E-value=5.3e-33  Score=272.77  Aligned_cols=263  Identities=33%  Similarity=0.518  Sum_probs=233.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+|+.|+++++.+.+...|+|.++..-..+..-+++||-+++..+|+||+-|++.|..+...|+.||||.+|+|.+.
T Consensus        23 vgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdi  102 (829)
T KOG0576|consen   23 VGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDI  102 (829)
T ss_pred             ecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccce
Confidence            58999999999999999999999999998887888889999999999999999999999999999999999999999986


Q ss_pred             Hh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          81 VT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        81 i~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      .. -+++++.++..++++.+.|+.|||+.|-+|||||-.||++...|-+++.|||  ++..+.-...             
T Consensus       103 y~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfg--vsaqitati~-------------  167 (829)
T KOG0576|consen  103 YHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFG--VSAQITATIA-------------  167 (829)
T ss_pred             eeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccC--chhhhhhhhh-------------
Confidence            65 4689999999999999999999999999999999999999999999999999  4432222221             


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (829)
T KOG0576|consen  168 --------------------------------------------------------------------------------  167 (829)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc----
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF----  315 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~----  315 (400)
                                                .+..+.||+-|||||+-.-.+.+.+...+            |+|+.|.+.    
T Consensus       168 --------------------------KrksfiGtpywmapEvaaverkggynqlc------------diwa~gitAiel~  209 (829)
T KOG0576|consen  168 --------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLC------------DIWALGITAIELG  209 (829)
T ss_pred             --------------------------hhhcccCCccccchhHHHHHhcccccccc------------cccccccchhhhh
Confidence                                      24567899999999998877766777777            999999777    


Q ss_pred             -ccCcchhhcHHHHHHHHHhC--CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         316 -LIPYLFILSCRQALYLIATN--KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       316 -~~P~~~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                       ..|..++.++++.++...+.  +++.++++.+|++.+.+|++.+|.++|.+|||++.+|.|||+...-+.+..++|+++
T Consensus       210 eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK  289 (829)
T KOG0576|consen  210 ELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDK  289 (829)
T ss_pred             hcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHH
Confidence             56666669999999988766  678899999999999999999999999999999999999999999888888899988


Q ss_pred             hHHH
Q psy9736         393 AKEA  396 (400)
Q Consensus       393 ~~~~  396 (400)
                      +++.
T Consensus       290 ~n~P  293 (829)
T KOG0576|consen  290 VNNP  293 (829)
T ss_pred             ccCC
Confidence            8753

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=3.6e-31  Score=247.68  Aligned_cols=243  Identities=21%  Similarity=0.299  Sum_probs=181.2

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.  +......+++|.+..... .....+.+|+.+++.++|+||+++++.+......+++|||+++++|
T Consensus         3 lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L   82 (269)
T cd05042           3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDL   82 (269)
T ss_pred             CCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcH
Confidence            6899999999873  333446788887654332 2345678999999999999999999999988899999999999999


Q ss_pred             HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          78 TDVVTET------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        78 ~~~i~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+++...      ..++..+..++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  .+..........   
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg--~~~~~~~~~~~~---  157 (269)
T cd05042          83 KNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYG--LALEQYPEDYYI---  157 (269)
T ss_pred             HHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccc--cccccccchhee---
Confidence            9998653      24577889999999999999999999999999999999999999999999  333111000000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (269)
T cd05042         158 --------------------------------------------------------------------------------  157 (269)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-------CCCCcccCCCCccchhhhhc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-------KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                        ......+++.|+|||++..       ..+...+|.||+|+++|||+
T Consensus       158 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~  203 (269)
T cd05042         158 ----------------------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELF  203 (269)
T ss_pred             ----------------------------------ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHH
Confidence                                              0011134556888887642       23446789999999999999


Q ss_pred             C-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch---hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         305 G-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       305 ~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      + |..         ||.. ....+.+..+.......++.   ...++..+.+++..|+ .||++|||++++++
T Consensus       204 ~~~~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         204 TAADQ---------PYPD-LSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             hCCCC---------CCCc-CCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            8 554         6655 45555555555443322222   2357788899999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=4.8e-31  Score=244.32  Aligned_cols=241  Identities=21%  Similarity=0.316  Sum_probs=194.6

Q ss_pred             CCcceEEEEEecCCCcee----EEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF----SKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~----~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.||.+......    ..|++|........ ..+.+.+|+.+++.++|+||+++++++..++..++++||++++
T Consensus         7 lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~   86 (258)
T smart00219        7 LGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGG   86 (258)
T ss_pred             eccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCC
Confidence            688999999988777654    77888888655433 5678899999999999999999999999989999999999999


Q ss_pred             ChHHHHhhc-C--CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          76 SLTDVVTET-C--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        76 ~L~~~i~~~-~--l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +|.+++... .  +++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+..........    
T Consensus        87 ~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg--~~~~~~~~~~~~----  160 (258)
T smart00219       87 DLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFG--LSRDLYDDDYYK----  160 (258)
T ss_pred             CHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccC--Cceecccccccc----
Confidence            999998753 2  8999999999999999999999999999999999999999999999999  333111100000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (258)
T smart00219      161 --------------------------------------------------------------------------------  160 (258)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~  311 (400)
                                                        .....+++.|+|||.+.+..+...+|.|++|+++|+|++ |..   
T Consensus       161 ----------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~---  203 (258)
T smart00219      161 ----------------------------------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGES---  203 (258)
T ss_pred             ----------------------------------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCC---
Confidence                                              001125678999999977777789999999999999998 443   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                            ||.. .+.......+.++.....  +...+..+.+++.+||..||++|||+.++++
T Consensus       204 ------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      204 ------PYPG-MSNEEVLEYLKKGYRLPK--PENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             ------CCCC-CCHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence                  5554 555666666666544433  3347889999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=3.6e-31  Score=247.35  Aligned_cols=242  Identities=18%  Similarity=0.329  Sum_probs=190.2

Q ss_pred             CCcceEEEEEecCCCcee------EEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFF------SKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~------~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|.|+++.||.++.....      ..+++|.+.... ......+.+|+.+++.++|+||+++++++..+...++++||++
T Consensus         3 lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (269)
T cd05044           3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELME   82 (269)
T ss_pred             cccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccC
Confidence            689999999998765443      678888775432 2345678899999999999999999999998889999999999


Q ss_pred             CCChHHHHhh--------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-----ceEEeccchhhhhh
Q psy9736          74 GGSLTDVVTE--------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-----SVKLSKWNRFIATK  140 (400)
Q Consensus        74 ~~~L~~~i~~--------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-----~~~l~dfg~~~~~~  140 (400)
                      +++|.+++..        ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++     .++++|||  .+..
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg--~~~~  160 (269)
T cd05044          83 GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG--LARD  160 (269)
T ss_pred             CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcc--cccc
Confidence            9999998863        2378889999999999999999999999999999999999887     89999999  3331


Q ss_pred             hccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc
Q psy9736         141 LYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV  220 (400)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  220 (400)
                      ........                                                                        
T Consensus       161 ~~~~~~~~------------------------------------------------------------------------  168 (269)
T cd05044         161 IYKSDYYR------------------------------------------------------------------------  168 (269)
T ss_pred             cccccccc------------------------------------------------------------------------
Confidence            11100000                                                                        


Q ss_pred             cccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchh
Q psy9736         221 GEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSI  300 (400)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~  300 (400)
                                                                   ......++..|+|||++.+......+|.|++|+++
T Consensus       169 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  203 (269)
T cd05044         169 ---------------------------------------------KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM  203 (269)
T ss_pred             ---------------------------------------------cCcccCCCccccCHHHHccCCcccchhHHHHHHHH
Confidence                                                         01112345679999999887777899999999999


Q ss_pred             hhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         301 LEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       301 ~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |||++ |..         ||.. .+..+....+..+....  .+...+..+.+||.+||..+|++||++.++++
T Consensus       204 ~ellt~g~~---------p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         204 WEILTLGQQ---------PYPA-LNNQEVLQHVTAGGRLQ--KPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHcCCC---------CCcc-cCHHHHHHHHhcCCccC--CcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99997 775         7765 44555555554443222  23457788999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=2.4e-31  Score=250.05  Aligned_cols=245  Identities=22%  Similarity=0.316  Sum_probs=190.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.++.+|++.+......+++|.+.....  .....+.+|+.+++.++|+||+++++++..+...++++||+++ ++.
T Consensus         7 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~   85 (283)
T cd05118           7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLY   85 (283)
T ss_pred             eecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHH
Confidence            5889999999998888888889988764432  2356788999999999999999999999999999999999965 888


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.+...  .+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+........          
T Consensus        86 ~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~--~~~~~~~~~~----------  153 (283)
T cd05118          86 KLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFG--LARSFGSPVR----------  153 (283)
T ss_pred             HHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeee--eeEecCCCcc----------
Confidence            877653  78999999999999999999999999999999999999999999999999  3321111000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       154 --------------------------------------------------------------------------------  153 (283)
T cd05118         154 --------------------------------------------------------------------------------  153 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......++..|+|||.+... .....+|.|++|+++|+|++|..       
T Consensus       154 -----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~-------  197 (283)
T cd05118         154 -----------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRP-------  197 (283)
T ss_pred             -----------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCC-------
Confidence                                         01112456789999988765 55678999999999999999965       


Q ss_pred             ccCcchhhcHHHHHHHHHhC--------------------------CCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         316 LIPYLFILSCRQALYLIATN--------------------------KKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~--------------------------~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                        ||.. .+..+....+...                          ..... ....+++..+.+||.+||+.||.+||++
T Consensus       198 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~  274 (283)
T cd05118         198 --LFPG-KSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA  274 (283)
T ss_pred             --CCCC-CCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH
Confidence              6644 3333333222211                          00000 0122467789999999999999999999


Q ss_pred             HHHhcCccc
Q psy9736         369 SLLLKHPFL  377 (400)
Q Consensus       369 ~~~l~hp~~  377 (400)
                      .++++||||
T Consensus       275 ~~ll~~~~~  283 (283)
T cd05118         275 EQALAHPYF  283 (283)
T ss_pred             HHHhhCCCC
Confidence            999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=9.1e-31  Score=247.11  Aligned_cols=254  Identities=15%  Similarity=0.223  Sum_probs=186.6

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      +|+|+++.|+.+.    +......|++|.+.... ....+.+.+|+.+++.++|+||+++++++...  ...++++||++
T Consensus        12 lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~   91 (284)
T cd05079          12 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP   91 (284)
T ss_pred             cCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccC
Confidence            6899999998775    45567788999876543 22346789999999999999999999988765  56899999999


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +++|.+++...  .+++..+..++.|++.||.|+|+.+++|+||||+||+++.++.++|+|||  .+..+.......   
T Consensus        92 g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg--~~~~~~~~~~~~---  166 (284)
T cd05079          92 SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG--LTKAIETDKEYY---  166 (284)
T ss_pred             CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCc--cccccccCccce---
Confidence            99999998653  58999999999999999999999999999999999999999999999999  443211000000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (284)
T cd05079         167 --------------------------------------------------------------------------------  166 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCC--c
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK--W  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~--w  309 (400)
                                                       .......++..|+|||++.+..+...+|.||+|+++|||+++..  +
T Consensus       167 ---------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         167 ---------------------------------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             ---------------------------------eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence                                             00112345677999999888777788999999999999998632  1


Q ss_pred             c-ccccc--ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         310 S-FQPHF--LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       310 s-~g~~~--~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      + .....  ..|.............+..+...  +.+..++..+.+|+.+||+.||++|||+.+++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         214 SPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             cccchhhhhcccccccccHHHHHHHHHcCccC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            1 00000  11111111111122222222222  2234578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=4.1e-31  Score=246.17  Aligned_cols=238  Identities=15%  Similarity=0.249  Sum_probs=187.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+++.||++.+... .++++|.+.... ...+.+.+|+.++++++|+|++++++++. .+..+++|||+++++|.++
T Consensus        14 ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~   90 (260)
T cd05069          14 LGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDF   90 (260)
T ss_pred             ecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHH
Confidence            68899999998876544 357888765433 34567899999999999999999998875 4568899999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+.........          
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg--~~~~~~~~~~~----------  158 (260)
T cd05069          91 LKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFG--LARLIEDNEYT----------  158 (260)
T ss_pred             HhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCc--cceEccCCccc----------
Confidence            8653   47899999999999999999999999999999999999999999999999  33311100000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (260)
T cd05069         159 --------------------------------------------------------------------------------  158 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||.+........+|.|++|+++|||++ |..        
T Consensus       159 ----------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~--------  202 (260)
T cd05069         159 ----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV--------  202 (260)
T ss_pred             ----------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCC--------
Confidence                                        0011134567999998887777788999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. ....+....+..+..+..  +...+..+.+++++||..||++||+++++++
T Consensus       203 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         203 -PYPG-MVNREVLEQVERGYRMPC--PQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence             7766 555555666655533332  3357789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=5.6e-31  Score=247.61  Aligned_cols=235  Identities=16%  Similarity=0.203  Sum_probs=179.1

Q ss_pred             CCcceEEEEEecCC------------------------CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccccc
Q psy9736           1 MKRGVTIDRFSSDD------------------------RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYL   56 (400)
Q Consensus         1 ~g~G~~~~v~~~~~------------------------~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~   56 (400)
                      ||+|+|+.||.+..                        .....+|++|.+........+.+.+|+.+++.++|+||++++
T Consensus         3 lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~   82 (274)
T cd05076           3 LGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVH   82 (274)
T ss_pred             cCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence            79999999998752                        223356888888655444456788899999999999999999


Q ss_pred             ceeEeCCEEEEEEeccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-------c
Q psy9736          57 DSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-------S  127 (400)
Q Consensus        57 ~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-------~  127 (400)
                      +++..+...++||||+++++|..++..  +.+++..+..++.|++.||.|||+.+++||||||+||+++..+       .
T Consensus        83 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~  162 (274)
T cd05076          83 GVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPF  162 (274)
T ss_pred             EEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccce
Confidence            999999999999999999999988864  4689999999999999999999999999999999999997654       3


Q ss_pred             eEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccc
Q psy9736         128 VKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEE  207 (400)
Q Consensus       128 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (400)
                      ++++|||  .+....                                                                 
T Consensus       163 ~kl~d~g--~~~~~~-----------------------------------------------------------------  175 (274)
T cd05076         163 IKLSDPG--VSFTAL-----------------------------------------------------------------  175 (274)
T ss_pred             eeecCCc--cccccc-----------------------------------------------------------------
Confidence            7899998  222000                                                                 


Q ss_pred             cceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CC
Q psy9736         208 LWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KN  286 (400)
Q Consensus       208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  286 (400)
                                                                                ......++..|+|||.+.+ ..
T Consensus       176 ----------------------------------------------------------~~~~~~~~~~~~aPe~~~~~~~  197 (274)
T cd05076         176 ----------------------------------------------------------SREERVERIPWIAPECVPGGNS  197 (274)
T ss_pred             ----------------------------------------------------------cccccccCCcccCchhhcCCCC
Confidence                                                                      0011245667999998865 44


Q ss_pred             CCcccCCCCccchhhhhc-CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhh
Q psy9736         287 KNQTTPPTGLTGSILEFL-GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       287 ~~~~~d~~s~g~~~~~~~-~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R  365 (400)
                      +...+|.|++|+++||++ +|..         ||... .+..... ..... ..++  ...+..+.++|.+||+.+|++|
T Consensus       198 ~~~~~Dv~slG~~l~el~~~g~~---------p~~~~-~~~~~~~-~~~~~-~~~~--~~~~~~~~~li~~cl~~~p~~R  263 (274)
T cd05076         198 LSTAADKWSFGTTLLEICFDGEV---------PLKER-TPSEKER-FYEKK-HRLP--EPSCKELATLISQCLTYEPTQR  263 (274)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCC---------Ccccc-ChHHHHH-HHHhc-cCCC--CCCChHHHHHHHHHcccChhhC
Confidence            557899999999999985 5665         66552 2222211 11211 1121  1245679999999999999999


Q ss_pred             hcHHHHhcC
Q psy9736         366 ASASLLLKH  374 (400)
Q Consensus       366 ~s~~~~l~h  374 (400)
                      ||+.+++++
T Consensus       264 ps~~~il~~  272 (274)
T cd05076         264 PSFRTILRD  272 (274)
T ss_pred             cCHHHHHHh
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=5.5e-31  Score=245.54  Aligned_cols=242  Identities=20%  Similarity=0.314  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|.++.||++.+......+++|.+...   .....+.+.+|+.++++++|+|++++++.+..++..++++||+++++|
T Consensus        10 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (267)
T cd08224          10 IGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDL   89 (267)
T ss_pred             eccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCH
Confidence            58899999999988777778888876532   223357789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ..++..     ..+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+.......       
T Consensus        90 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~--~~~~~~~~~-------  160 (267)
T cd08224          90 SRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG--LGRFFSSKT-------  160 (267)
T ss_pred             HHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccc--eeeeccCCC-------
Confidence            988853     248899999999999999999999999999999999999999999999999  332110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (267)
T cd08224         161 --------------------------------------------------------------------------------  160 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......|++.|+|||.+.+..+...+|.|++|+++|+|++|..    
T Consensus       161 --------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~----  204 (267)
T cd08224         161 --------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS----  204 (267)
T ss_pred             --------------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCC----
Confidence                                            00112246778999999888777788999999999999999976    


Q ss_pred             cccccCcchhh-cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFIL-SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.... +..+....+..+..+..+. ..++..+.++|.+||..+|++|||+.++++
T Consensus       205 -----p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         205 -----PFYGDKMNLYSLCKKIEKCDYPPLPA-DHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             -----CcccCCccHHHHHhhhhcCCCCCCCh-hhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 876533 3333444444443333332 247778999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1026|consensus

Probab=99.97  E-value=1.3e-31  Score=271.18  Aligned_cols=254  Identities=20%  Similarity=0.311  Sum_probs=208.5

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||.|.|++||++.-.     +...-||+|.++..... .+++|++|++++..++|+|||++++++..++..++|+|||..
T Consensus       494 LGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~  573 (774)
T KOG1026|consen  494 LGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDH  573 (774)
T ss_pred             hcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEeccc
Confidence            699999999998543     33477999999877665 678899999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-----------C----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          75 GSLTDVVTET-----------C----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        75 ~~L~~~i~~~-----------~----l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |+|.+++...           .    ++..+.+.|+.||+.|+.||-++.+|||||-..|++++.+-.+||+|||  +.+
T Consensus       574 GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfG--LsR  651 (774)
T KOG1026|consen  574 GDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFG--LSR  651 (774)
T ss_pred             ccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccc--cch
Confidence            9999999631           2    7788999999999999999999999999999999999999999999999  433


Q ss_pred             hhc-cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccc
Q psy9736         140 KLY-IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSY  218 (400)
Q Consensus       140 ~~~-~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (400)
                      ..+ .+..+.                                                       .+++           
T Consensus       652 diYssDYYk~-------------------------------------------------------~~~t-----------  665 (774)
T KOG1026|consen  652 DIYSSDYYKV-------------------------------------------------------RGNT-----------  665 (774)
T ss_pred             hhhhhhhhcc-------------------------------------------------------cCCc-----------
Confidence            221 111111                                                       0011           


Q ss_pred             cccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccc
Q psy9736         219 LVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTG  298 (400)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~  298 (400)
                                                                          .-...|||||.|...+++..+|+||+|+
T Consensus       666 ----------------------------------------------------~lPIRWMppEsIly~kFTteSDVWs~GV  693 (774)
T KOG1026|consen  666 ----------------------------------------------------LLPIRWMPPESILYGKFTTESDVWSFGV  693 (774)
T ss_pred             ----------------------------------------------------eeeeecCCHHHhhcCcccchhhhhhhhh
Confidence                                                                1235899999999999999999999999


Q ss_pred             hhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh--cCcc
Q psy9736         299 SILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL--KHPF  376 (400)
Q Consensus       299 ~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l--~hp~  376 (400)
                      ++.|+     ||+|   ..||+. .+..+.+..|..+.-  ++-|++.+.++.+||.+||+.+|.+||++.|+-  -+.|
T Consensus       694 vLWEI-----FsyG---~QPy~g-lSn~EVIe~i~~g~l--L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  694 VLWEI-----FSYG---KQPYYG-LSNQEVIECIRAGQL--LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             hhhhh-----hccc---cCcccc-cchHHHHHHHHcCCc--ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            99877     5555   569998 888888888888765  777888999999999999999999999999973  2245


Q ss_pred             ccccCCCCC
Q psy9736         377 LKIARPLAS  385 (400)
Q Consensus       377 ~~~~~~~~~  385 (400)
                      -+.+...++
T Consensus       763 ~~~s~~~~~  771 (774)
T KOG1026|consen  763 AQASPKYSS  771 (774)
T ss_pred             HhcCccccc
Confidence            544444433

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=5.7e-31  Score=245.71  Aligned_cols=238  Identities=17%  Similarity=0.254  Sum_probs=186.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.||++.+... .+|++|....... ..+.+.+|+.++++++|+||+++++.+. +...++++||+++++|.++
T Consensus        14 lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~   90 (262)
T cd05071          14 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF   90 (262)
T ss_pred             cCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHH
Confidence            68899999999876555 3588888764332 3467899999999999999999998875 4568999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|+|+.+++|+||||+||+++.++.++|+|||  .+........ .         
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg--~~~~~~~~~~-~---------  158 (262)
T cd05071          91 LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG--LARLIEDNEY-T---------  158 (262)
T ss_pred             HhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCC--ceeecccccc-c---------
Confidence            875   247889999999999999999999999999999999999999999999999  3331110000 0         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (262)
T cd05071         159 --------------------------------------------------------------------------------  158 (262)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++.+..+...+|.|++|+++||+++ |..        
T Consensus       159 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~--------  202 (262)
T cd05071         159 ----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV--------  202 (262)
T ss_pred             ----------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCC--------
Confidence                                        0011235677999999988777789999999999999999 554        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. ....+....+..+.....  ...++..+.+++.+||+.||++||++.++++
T Consensus       203 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         203 -PYPG-MVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             -CCCC-CChHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence             6654 445555555555433322  3347788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG1035|consensus

Probab=99.97  E-value=1.1e-31  Score=278.48  Aligned_cols=262  Identities=20%  Similarity=0.270  Sum_probs=195.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEe------------------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLV------------------   61 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~------------------   61 (400)
                      ||+|+|+.|++++++-.+..+|+|++.... ......+.+|+.+|.+|+|||+|+||..|..                  
T Consensus       487 LGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~  566 (1351)
T KOG1035|consen  487 LGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESR  566 (1351)
T ss_pred             hcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhh
Confidence            799999999999999999999999998773 2334668899999999999999999877653                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy9736          62 --------------------------------------------------------------------------------   61 (400)
Q Consensus        62 --------------------------------------------------------------------------------   61 (400)
                                                                                                      
T Consensus       567 sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~  646 (1351)
T KOG1035|consen  567 SQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTS  646 (1351)
T ss_pred             cccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcch
Confidence                                                                                            


Q ss_pred             -------------C--------CEEEEEEeccCCCChHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCC
Q psy9736          62 -------------G--------EELWVVMEYLPGGSLTDVVTETCM--DEGQIAAVCREVLQALEFLHSNQVIHRDIKSD  118 (400)
Q Consensus        62 -------------~--------~~~~lv~e~~~~~~L~~~i~~~~l--~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  118 (400)
                                   .        ...|+-||||+..++.++++++.+  .....++++++|+.||.|+|+.|+|||||||.
T Consensus       647 ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~  726 (1351)
T KOG1035|consen  647 ESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPR  726 (1351)
T ss_pred             hhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcc
Confidence                         0        125888999999889999987755  37788999999999999999999999999999


Q ss_pred             ceEecCCCceEEeccchhhhhhhc--cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchh
Q psy9736         119 NILLGLDGSVKLSKWNRFIATKLY--IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIV  196 (400)
Q Consensus       119 nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
                      ||+++.++.+||+|||  +|....  .......                                               
T Consensus       727 NIFLd~~~~VKIGDFG--LAt~~~~~~~~~d~~-----------------------------------------------  757 (1351)
T KOG1035|consen  727 NIFLDSRNSVKIGDFG--LATDLKENLESIDQD-----------------------------------------------  757 (1351)
T ss_pred             eeEEcCCCCeeecccc--cchhhhhhhhhHhhc-----------------------------------------------
Confidence            9999999999999999  444211  0000000                                               


Q ss_pred             hhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCcc
Q psy9736         197 NYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTS  276 (400)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  276 (400)
                                               ...+..                               -...+....+..+||-.|
T Consensus       758 -------------------------~~~~~~-------------------------------~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  758 -------------------------LSFSTN-------------------------------RAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             -------------------------cCcccc-------------------------------ccCCCCcccccccceeee
Confidence                                     000000                               000111235667999999


Q ss_pred             CCCcceecCC---CCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-hhhhcHHHHH
Q psy9736         277 LPPPVVLDKN---KNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-KEKLSQIFQD  352 (400)
Q Consensus       277 ~aPE~~~~~~---~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-~~~~s~~~~d  352 (400)
                      +|||++.+..   |..+.|+||+|+|+|||+.            ||...+....++..+-++..|...+ +.+--+.-..
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y------------PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~s  849 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY------------PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEAS  849 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhc------------cCCchHHHHHHHHhcccCCCCCCcccccccchHHHH
Confidence            9999998865   6688899999999998854            5555445555555444443322200 1112234678


Q ss_pred             HHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         353 FLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       353 li~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      +|+.||+.||++||||.|+|++.||.-
T Consensus       850 lI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  850 LIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             HHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            999999999999999999999999973

>KOG0603|consensus

Probab=99.97  E-value=1.1e-31  Score=264.01  Aligned_cols=235  Identities=23%  Similarity=0.266  Sum_probs=185.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+|+.+..+....+....++|.+......    ..+|+.++... +|+||+++.+++.++.+.|+|||++.|+-+.+
T Consensus       330 ~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~----~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~  405 (612)
T KOG0603|consen  330 LGEGSFSAVKYCESSPTDQEPAVKIISKRADD----NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLR  405 (612)
T ss_pred             cCCCCccceeeeeccccccchhheeccccccc----cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHH
Confidence            47787777766655555555555554433211    24677666654 89999999999999999999999999998888


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe-cCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL-GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      .+...+.....+..|+.+|+.++.|||++|++|||+||+||++ +..++++|+|||  .+.....+              
T Consensus       406 ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG--~a~~~~~~--------------  469 (612)
T KOG0603|consen  406 RIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFG--FWSELERS--------------  469 (612)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEec--hhhhCchh--------------
Confidence            8876544446777899999999999999999999999999999 688999999999  33311111              


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       470 --------------------------------------------------------------------------------  469 (612)
T KOG0603|consen  470 --------------------------------------------------------------------------------  469 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                  .-+-+=|..|.|||++....+....|.||+|+++|+||+|..         |
T Consensus       470 ----------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~t---------p  512 (612)
T KOG0603|consen  470 ----------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRT---------L  512 (612)
T ss_pred             ----------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCC---------c
Confidence                                        001144678999999999988899999999999999999987         8


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      |....+..++..+|..+   .+  ...+|..++|||++||+.||++|+++.+++.||||
T Consensus       513 ~~~~P~~~ei~~~i~~~---~~--s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  513 FAAHPAGIEIHTRIQMP---KF--SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             cccCCchHHHHHhhcCC---cc--ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            88866665555544443   22  25689999999999999999999999999999999

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=6.1e-31  Score=246.26  Aligned_cols=240  Identities=18%  Similarity=0.239  Sum_probs=189.0

Q ss_pred             CCcceEEEEEecCCCce---eEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.||.+.....   ...|++|...... ....+.+.+|+.++++++|+||+++++++.. ...++++||+++++
T Consensus        14 lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~   92 (270)
T cd05056          14 IGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGE   92 (270)
T ss_pred             eCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCc
Confidence            58899999998864332   3567888776554 3345678999999999999999999998875 55789999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..++.++.+++.|+.|+|+.+++|+||||+||+++.++.++++|||  .+.........       
T Consensus        93 L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g--~~~~~~~~~~~-------  163 (270)
T cd05056          93 LRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFG--LSRYLEDESYY-------  163 (270)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCc--eeeecccccce-------
Confidence            99999753  58999999999999999999999999999999999999999999999999  33311110000       


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (270)
T cd05056         164 --------------------------------------------------------------------------------  163 (270)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                     ..+...++..|+|||.+....+...+|.||+|+++||+++ |..     
T Consensus       164 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~-----  207 (270)
T cd05056         164 -------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVK-----  207 (270)
T ss_pred             -------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCC-----
Confidence                                           0011124567999999888777788999999999999886 765     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+.++.....  +..++..+.++|.+||..+|++|||+.++++
T Consensus       208 ----pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         208 ----PFQG-VKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             ----CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                7765 455555666665544333  3457889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=8.3e-31  Score=249.93  Aligned_cols=243  Identities=15%  Similarity=0.242  Sum_probs=188.8

Q ss_pred             CCcceEEEEEecC-------CCceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSD-------DRRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~-------~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      +|.|+|+.||.+.       .......|++|...... ....+.+.+|+.+++.+ +|+||+++++++..+...+++|||
T Consensus        23 lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~  102 (304)
T cd05101          23 LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  102 (304)
T ss_pred             eeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEec
Confidence            5889999998774       22344578888875432 23346788999999999 899999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .++...+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||
T Consensus       103 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g  182 (304)
T cd05101         103 ASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG  182 (304)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCc
Confidence            9999999988642                 36778889999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+..........                                                                  
T Consensus       183 --~~~~~~~~~~~~------------------------------------------------------------------  194 (304)
T cd05101         183 --LARDVNNIDYYK------------------------------------------------------------------  194 (304)
T ss_pred             --cceecccccccc------------------------------------------------------------------
Confidence              433111000000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......+++.|+|||++.+..+...+|+|
T Consensus       195 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  223 (304)
T cd05101         195 ---------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVW  223 (304)
T ss_pred             ---------------------------------------------------cccCCCCCceeeCchhhccCCCCchhhHH
Confidence                                                               01112456789999999887777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|+++|++++ |..         ||.. .+..+....+..+.....  +.+.+..+.+|+.+||..+|++|||+.++++
T Consensus       224 slG~~l~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~  291 (304)
T cd05101         224 SFGVLMWEIFTLGGS---------PYPG-IPVEELFKLLKEGHRMDK--PANCTNELYMMMRDCWHAIPSHRPTFKQLVE  291 (304)
T ss_pred             HHHHHHHHHHcCCCC---------Cccc-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            99999999998 554         5544 455555555544433322  3457889999999999999999999999987


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      .
T Consensus       292 ~  292 (304)
T cd05101         292 D  292 (304)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=6e-31  Score=246.82  Aligned_cols=243  Identities=19%  Similarity=0.247  Sum_probs=189.0

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+|+.||.+....     ....|++|........ ..+.+.+|+.++++++|+||+++++++......++++||+++
T Consensus        13 lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (275)
T cd05046          13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDL   92 (275)
T ss_pred             ecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCC
Confidence            6899999999987532     2356788877544332 346789999999999999999999999888899999999999


Q ss_pred             CChHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          75 GSLTDVVTET----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        75 ~~L~~~i~~~----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      ++|.+++...          .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++++|||  .+......
T Consensus        93 ~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~--~~~~~~~~  170 (275)
T cd05046          93 GDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS--LSKDVYNS  170 (275)
T ss_pred             CcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc--cccccCcc
Confidence            9999998642          48999999999999999999999999999999999999999999999999  32211000


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      ..                                                                              
T Consensus       171 ~~------------------------------------------------------------------------------  172 (275)
T cd05046         171 EY------------------------------------------------------------------------------  172 (275)
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             cccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhc
Q psy9736         225 WYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                              .......++..|+|||.+.+......+|.|++|+++|+++
T Consensus       173 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  212 (275)
T cd05046         173 ----------------------------------------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF  212 (275)
T ss_pred             ----------------------------------------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence                                                    0011224566799999988777778899999999999999


Q ss_pred             C-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         305 G-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       305 ~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      + |..         ||.. .........+..+... ...+..++..+.+++.+||..||++|||+.++++.
T Consensus       213 ~~~~~---------p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         213 TQGEL---------PFYG-LSDEEVLNRLQAGKLE-LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             hCCCC---------Cccc-cchHHHHHHHHcCCcC-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            8 554         7655 3444444444433222 22233477899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=8.4e-31  Score=243.95  Aligned_cols=238  Identities=15%  Similarity=0.244  Sum_probs=187.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.... ..+|++|.+..... ..+.+.+|+.++++++|+||+++++++. ++..++++||+.+++|.++
T Consensus        14 ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~   90 (260)
T cd05067          14 LGAGQFGEVWMGYYNG-HTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDF   90 (260)
T ss_pred             eccCccceEEeeecCC-CceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHH
Confidence            6899999999987543 46788887764433 4567899999999999999999998874 5578999999999999998


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++++|||  .+.........          
T Consensus        91 ~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg--~~~~~~~~~~~----------  158 (260)
T cd05067          91 LKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFG--LARLIEDNEYT----------  158 (260)
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCc--ceeecCCCCcc----------
Confidence            864   258899999999999999999999999999999999999999999999999  33211100000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (260)
T cd05067         159 --------------------------------------------------------------------------------  158 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++....+...+|.|++|+++||+++ |..        
T Consensus       159 ----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~--------  202 (260)
T cd05067         159 ----------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI--------  202 (260)
T ss_pred             ----------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCC--------
Confidence                                        0011134568999999988777788999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+..+.....  +...+..+.+++.+||..+|++|||++++++
T Consensus       203 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         203 -PYPG-MTNPEVIQNLERGYRMPR--PDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             -CCCC-CChHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             7765 455555555544433322  3456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=9.2e-31  Score=245.03  Aligned_cols=243  Identities=20%  Similarity=0.258  Sum_probs=180.4

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||.+.  +.....++++|.+..... .....+.+|+.++++++|+||+++++.+......++||||+++++|
T Consensus         3 lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   82 (269)
T cd05087           3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDL   82 (269)
T ss_pred             ccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcH
Confidence            6899999999885  445567788888765432 2335688999999999999999999999888889999999999999


Q ss_pred             HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          78 TDVVTET------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        78 ~~~i~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+++...      ..++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+........ .   
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg--~~~~~~~~~~-~---  156 (269)
T cd05087          83 KGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYG--LSHNKYKEDY-Y---  156 (269)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCcc--ccccccCcce-e---
Confidence            9988632      35667788999999999999999999999999999999999999999999  3321100000 0   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (269)
T cd05087         157 --------------------------------------------------------------------------------  156 (269)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-------CCCcccCCCCccchhhhhc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-------NKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~d~~s~g~~~~~~~  304 (400)
                                                       .......|+..|+|||++.+.       .++..+|.||+|+++|||+
T Consensus       157 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~  203 (269)
T cd05087         157 ---------------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELF  203 (269)
T ss_pred             ---------------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHH
Confidence                                             001122456778899987642       2346789999999999999


Q ss_pred             C-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchh---hhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         305 G-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       305 ~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      + |..         ||... ...+.......+....++.+   ...+..+.+++++|+ .+|++|||+++++.
T Consensus       204 ~~g~~---------p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         204 ELGSQ---------PYRHL-SDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             hCCCC---------CCCCC-ChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            6 876         77653 33333333332222111111   235678899999999 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=6.4e-31  Score=251.14  Aligned_cols=243  Identities=16%  Similarity=0.256  Sum_probs=187.6

Q ss_pred             CCcceEEEEEecCCC-------ceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDR-------RFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-------~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+|+.|+.+.+.       .....+++|.+.... ....+.+.+|+.+++.+ +|+||+++++++..++..|+++||
T Consensus        26 lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~  105 (307)
T cd05098          26 LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  105 (307)
T ss_pred             eccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEec
Confidence            689999999988642       223468888876432 23345688899999999 799999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .++...++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||
T Consensus       106 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg  185 (307)
T cd05098         106 ASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG  185 (307)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCc
Confidence            9999999998642                 37888999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+..........                                                                  
T Consensus       186 --~a~~~~~~~~~~------------------------------------------------------------------  197 (307)
T cd05098         186 --LARDIHHIDYYK------------------------------------------------------------------  197 (307)
T ss_pred             --ccccccccchhh------------------------------------------------------------------
Confidence              333110000000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......+++.|+|||++.+..+...+|.|
T Consensus       198 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  226 (307)
T cd05098         198 ---------------------------------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDVW  226 (307)
T ss_pred             ---------------------------------------------------ccccCCCccceeChHHhccCCCCcHHHHH
Confidence                                                               00111344679999999887777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|+++|||++ |..         ||.. .+..+....+..+.....  +...+..+.+|+.+||..+|++|||+.++++
T Consensus       227 slG~~l~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~evl~  294 (307)
T cd05098         227 SFGVLLWEIFTLGGS---------PYPG-VPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  294 (307)
T ss_pred             HHHHHHHHHHcCCCC---------CCCc-CCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            99999999998 654         6644 444444444444433222  3457789999999999999999999999986


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       295 ~  295 (307)
T cd05098         295 D  295 (307)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=1e-30  Score=250.57  Aligned_cols=242  Identities=16%  Similarity=0.238  Sum_probs=187.2

Q ss_pred             CCcceEEEEEecCCC-------ceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDR-------RFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-------~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      +|+|+++.||.+++.       .....+++|.+.... ......+.+|+.+++++ +|+||+++++++..++..++++||
T Consensus        20 lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   99 (314)
T cd05099          20 LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEY   99 (314)
T ss_pred             ecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEec
Confidence            689999999988642       223457777765432 22345688999999999 699999999999988899999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||
T Consensus       100 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg  179 (314)
T cd05099         100 AAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFG  179 (314)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccc
Confidence            9999999988642                 37888899999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+..........                                                                  
T Consensus       180 --~~~~~~~~~~~~------------------------------------------------------------------  191 (314)
T cd05099         180 --LARGVHDIDYYK------------------------------------------------------------------  191 (314)
T ss_pred             --cccccccccccc------------------------------------------------------------------
Confidence              443111000000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......++..|+|||++.+..+...+|.|
T Consensus       192 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  220 (314)
T cd05099         192 ---------------------------------------------------KTSNGRLPVKWMAPEALFDRVYTHQSDVW  220 (314)
T ss_pred             ---------------------------------------------------ccccCCCCccccCHHHHccCCcCccchhh
Confidence                                                               00111234579999999888777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|+++|+|++ |..         ||.. .+..+....+..+.....  +...+..+.+|+.+||..||++|||+.++++
T Consensus       221 slG~~l~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         221 SFGILMWEIFTLGGS---------PYPG-IPVEELFKLLREGHRMDK--PSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHHHHHHHHhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999998 555         6654 455555555555433332  3456778999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=7e-31  Score=243.93  Aligned_cols=233  Identities=21%  Similarity=0.300  Sum_probs=184.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeE-eCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYL-VGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|+++.++++...  +.+|++|.....  ...+.+.+|+.++++++|+|++++++++. .+...++++||+++++|.+
T Consensus        14 lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~   89 (256)
T cd05082          14 IGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD   89 (256)
T ss_pred             ecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHH
Confidence            588988888887543  456788876433  24567899999999999999999998754 4567899999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++...   .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++++|||  .+.....    .        
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg--~~~~~~~----~--------  155 (256)
T cd05082          90 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEASS----T--------  155 (256)
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCc--cceeccc----c--------
Confidence            98753   47889999999999999999999999999999999999999999999999  3321100    0        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (256)
T cd05082         156 --------------------------------------------------------------------------------  155 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~  315 (400)
                                                    .....++..|+|||++....+...+|.|++|+++|+|++ |..       
T Consensus       156 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~-------  198 (256)
T cd05082         156 ------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV-------  198 (256)
T ss_pred             ------------------------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCC-------
Confidence                                          001123457899998888777788999999999999997 776       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                        ||.. .+..+....+.++..+..  +..++..+.+++.+||+.||++|||+.++++
T Consensus       199 --p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         199 --PYPR-IPLKDVVPRVEKGYKMDA--PDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             --CCCC-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              7765 445555555555544333  3347789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=6e-31  Score=246.02  Aligned_cols=243  Identities=14%  Similarity=0.204  Sum_probs=189.3

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|.|+.||.+....   ....+++|.+.... ....+.+.+|+.++++++|+||+++++++..++..+++|||+++++
T Consensus        12 lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   91 (267)
T cd05066          12 IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS   91 (267)
T ss_pred             ecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCC
Confidence            5888888888876532   23467788775432 2245678999999999999999999999998899999999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+..........      
T Consensus        92 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg--~~~~~~~~~~~~------  163 (267)
T cd05066          92 LDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFG--LSRVLEDDPEAA------  163 (267)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCC--ccccccccccee------
Confidence            99998753  58999999999999999999999999999999999999999999999999  333221110000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (267)
T cd05066         164 --------------------------------------------------------------------------------  163 (267)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    .......++..|+|||.+....+...+|.|++|+++||+++ |..     
T Consensus       164 ------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~-----  208 (267)
T cd05066         164 ------------------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER-----  208 (267)
T ss_pred             ------------------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCC-----
Confidence                                          00011123567999999988777789999999999999886 776     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. ....+....+..+...  +.+..++..+.+++.+||+.+|++||++.++++
T Consensus       209 ----p~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         209 ----PYWE-MSNQDVIKAIEEGYRL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             ----Cccc-CCHHHHHHHHhCCCcC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                7766 4455555555554322  223456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1006|consensus

Probab=99.97  E-value=6e-32  Score=239.99  Aligned_cols=247  Identities=21%  Similarity=0.296  Sum_probs=208.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.|++|.+-..+..+..+|+|.+..... ...++++.|.+...+- +.+|||+||+....++..|+.||+| ..++.
T Consensus        72 iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlD  150 (361)
T KOG1006|consen   72 IGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DISLD  150 (361)
T ss_pred             hcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhhHH
Confidence            6999999999999999999999999987654 5567888998877664 7999999999999999999999999 55776


Q ss_pred             HHHh------hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          79 DVVT------ETCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        79 ~~i~------~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+.+      ...+++..+-.+.--.+.||+||-.. .|+|||+||+||+++..|.+||+|||  +...+..+..+.   
T Consensus       151 klYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFG--IcGqLv~SiAkT---  225 (361)
T KOG1006|consen  151 KLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFG--ICGQLVDSIAKT---  225 (361)
T ss_pred             HHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeeccc--chHhHHHHHHhh---
Confidence            6554      23688888888888889999999976 99999999999999999999999999  433232222211   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       226 --------------------------------------------------------------------------------  225 (361)
T KOG1006|consen  226 --------------------------------------------------------------------------------  225 (361)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC--CCCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK--NKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                           .-.|...|||||.+...  .|...+|.||+|+.+||..+|.. 
T Consensus       226 -------------------------------------~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~f-  267 (361)
T KOG1006|consen  226 -------------------------------------VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNF-  267 (361)
T ss_pred             -------------------------------------hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCC-
Confidence                                                 11466778888877753  34578999999999999999998 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcchhhh---hcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEK---LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~---~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                              ||.+-++-++++.++..+.+|.+....+   ++..+.+||..||.+|-+.||+..+++.+||++.
T Consensus       268 --------Pyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  268 --------PYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             --------CcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence                    9999788899999999999988776655   8899999999999999999999999999999985

>KOG0670|consensus

Probab=99.97  E-value=3e-31  Score=253.95  Aligned_cols=187  Identities=19%  Similarity=0.239  Sum_probs=143.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC------CCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH------PNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h------~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      .|+|+|+.|..+.++.-+..||||++.-.+ .-.+.=+.|+++|++|..      -|+++|+..|...+++|||+|.+ .
T Consensus       440 ~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~L-s  517 (752)
T KOG0670|consen  440 TGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPL-S  517 (752)
T ss_pred             cccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhh-h
Confidence            489999999999999999999999986443 344556789999999942      38999999999999999999998 7


Q ss_pred             CChHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+|.+.++..    .|....++.++.|++.||.+|-..||+|+||||+|||++.. ..++|||||  .|...+.    . 
T Consensus       518 lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfG--SA~~~~e----n-  590 (752)
T KOG0670|consen  518 LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFG--SASFASE----N-  590 (752)
T ss_pred             chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCc--ccccccc----c-
Confidence            7999999753    58888999999999999999999999999999999999876 568999999  4331111    1 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                          +.++...+..|+|||++.|..                           |.-+.|+||+||.++|+.||...|++
T Consensus       591 ----eitPYLVSRFYRaPEIiLG~~---------------------------yd~~iD~WSvgctLYElYtGkIlFpG  637 (752)
T KOG0670|consen  591 ----EITPYLVSRFYRAPEIILGLP---------------------------YDYPIDTWSVGCTLYELYTGKILFPG  637 (752)
T ss_pred             ----cccHHHHHHhccCcceeecCc---------------------------ccCCccceeeceeeEEeeccceecCC
Confidence                222333444566666666653                           45555566666666666666555543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=7.8e-31  Score=250.13  Aligned_cols=256  Identities=21%  Similarity=0.267  Sum_probs=186.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeC--------CEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG--------EELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--------~~~~lv~e   70 (400)
                      ||.|+++.||++.+......+++|.+.....  .....+.+|+++++.++|+||+++++++...        ..+++++|
T Consensus        16 lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~   95 (311)
T cd07866          16 LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTP   95 (311)
T ss_pred             eccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEe
Confidence            5899999999998877777788887654322  1234567899999999999999999887543        35799999


Q ss_pred             ccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          71 YLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        71 ~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      |+.+ ++...+..  ..+++..++.++.|++.||.|||+.+++|+|+||+||+++.++.++|+|||  .+..........
T Consensus        96 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~~  172 (311)
T cd07866          96 YMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG--LARPYDGPPPNP  172 (311)
T ss_pred             cCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCc--cchhccCCCccc
Confidence            9955 67766653  369999999999999999999999999999999999999999999999999  443221111000


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                               .      
T Consensus       173 -------------------------------------------------------------------------~------  173 (311)
T cd07866         173 -------------------------------------------------------------------------K------  173 (311)
T ss_pred             -------------------------------------------------------------------------c------
Confidence                                                                                     0      


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                   .+........+...|++.|+|||.+.+. .+...+|.|++|+++|||++|.
T Consensus       174 -----------------------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~  224 (311)
T cd07866         174 -----------------------------GGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR  224 (311)
T ss_pred             -----------------------------cCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCC
Confidence                                         0000011123445778899999987653 3557899999999999999996


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCC--------------------------CCCcch-hhhhcHHHHHHHHHhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNK--------------------------KPEIKE-KEKLSQIFQDFLDQCLEE  360 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~--------------------------~~~~~~-~~~~s~~~~dli~~~L~~  360 (400)
                      .         ||.. .+.......+....                          ++.+.. ...++..+.+||++||+.
T Consensus       225 ~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  294 (311)
T cd07866         225 P---------ILQG-KSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL  294 (311)
T ss_pred             C---------CCCC-CCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc
Confidence            4         5544 44433333332210                          000000 012446788999999999


Q ss_pred             hhhhhhcHHHHhcCccc
Q psy9736         361 EVETRASASLLLKHPFL  377 (400)
Q Consensus       361 dP~~R~s~~~~l~hp~~  377 (400)
                      ||++|||+.++++||||
T Consensus       295 ~p~~R~t~~ell~~~~f  311 (311)
T cd07866         295 DPYKRLTASDALEHPYF  311 (311)
T ss_pred             CcccCcCHHHHhcCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=1.3e-30  Score=245.55  Aligned_cols=241  Identities=18%  Similarity=0.226  Sum_probs=186.0

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||.|+++.||++.    +...+.++++|.+..... ...+++..|+.+++++.|+||+++++++. +...++++||++++
T Consensus        15 lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~g   93 (279)
T cd05111          15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLG   93 (279)
T ss_pred             cCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCC
Confidence            6889999998775    445566788888754332 23356778888999999999999999875 45678899999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  +.+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++|+|||  .+.........      
T Consensus        94 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg--~~~~~~~~~~~------  165 (279)
T cd05111          94 SLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFG--VADLLYPDDKK------  165 (279)
T ss_pred             cHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCc--cceeccCCCcc------
Confidence            99999964  368999999999999999999999999999999999999999999999999  33311100000      


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (279)
T cd05111         166 --------------------------------------------------------------------------------  165 (279)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                     .......++..|+|||.+....++..+|.||+|+++||+++ |..    
T Consensus       166 -------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~----  210 (279)
T cd05111         166 -------------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAE----  210 (279)
T ss_pred             -------------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC----
Confidence                                           00122356678999999988777788999999999999998 765    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.. ..+......+.++..+.  .+...+..+.+++.+||..||++|||+.|+++
T Consensus       211 -----p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         211 -----PYAG-MRPHEVPDLLEKGERLA--QPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             -----CCCC-CCHHHHHHHHHCCCcCC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                 7765 34444434344443322  23335678899999999999999999999977

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=5.9e-31  Score=249.14  Aligned_cols=242  Identities=17%  Similarity=0.281  Sum_probs=186.5

Q ss_pred             CCcceEEEEEecCCCc-----eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR-----FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-----~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|+|+|+.||++.+..     ....+++|.+..... ...+.+.+|+.+++.++|+||+++++.+..++..++++||+.+
T Consensus         8 lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (290)
T cd05045           8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY   87 (290)
T ss_pred             ccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCC
Confidence            6889999998876532     224577777654332 2346788999999999999999999999988999999999999


Q ss_pred             CChHHHHhh-------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          75 GSLTDVVTE-------------------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        75 ~~L~~~i~~-------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      ++|.+++..                         ..+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~k  167 (290)
T cd05045          88 GSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMK  167 (290)
T ss_pred             CCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEE
Confidence            999988753                         1367889999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  .+..........                                                             
T Consensus       168 l~dfg--~~~~~~~~~~~~-------------------------------------------------------------  184 (290)
T cd05045         168 ISDFG--LSRDVYEEDSYV-------------------------------------------------------------  184 (290)
T ss_pred             ecccc--ccccccCccchh-------------------------------------------------------------
Confidence            99999  333111100000                                                             


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                              ......++..|+|||++.+..+..
T Consensus       185 --------------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         185 --------------------------------------------------------KRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             --------------------------------------------------------cccCCCCCccccCHHHHccCCcch
Confidence                                                                    011123456799999988877778


Q ss_pred             ccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         290 TTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      .+|.||+|+++|||++ |..         ||.. ..+.+....+.+.....  .+..++..+.+|+.+||+.||++||++
T Consensus       209 ~~Di~slG~~l~el~t~g~~---------p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~  276 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGN---------PYPG-IAPERLFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTF  276 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCC---------CCCC-CCHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            8999999999999998 765         6654 44444444443333222  244578899999999999999999999


Q ss_pred             HHHhc
Q psy9736         369 SLLLK  373 (400)
Q Consensus       369 ~~~l~  373 (400)
                      +++++
T Consensus       277 ~~i~~  281 (290)
T cd05045         277 ADISK  281 (290)
T ss_pred             HHHHH
Confidence            99975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=7.6e-31  Score=248.05  Aligned_cols=248  Identities=21%  Similarity=0.298  Sum_probs=186.6

Q ss_pred             CCcceEEEEEecCC---CceeEEEEecccccc----CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLA----QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      +|.|+++.||.+.+   ......+++|.+...    .....+.+.+|+.+++++ +|+||+++++.+..+...++|+||+
T Consensus         8 ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (288)
T cd05583           8 LGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYV   87 (288)
T ss_pred             eccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecC
Confidence            57888888887643   223345666655321    122345678999999999 6999999999999999999999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++++|.+.+.. ..+++..++.++.|++.+|.|||+.+++|+||+|+||+++.++.++++|||  .+.........    
T Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~----  161 (288)
T cd05583          88 NGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFG--LSKEFLAEEEE----  161 (288)
T ss_pred             CCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECc--ccccccccccc----
Confidence            99999988865 468999999999999999999999999999999999999999999999999  33311110000    


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (288)
T cd05583         162 --------------------------------------------------------------------------------  161 (288)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                        ......|++.|+|||.+.+..  ....+|.|++|+++|||++|.. 
T Consensus       162 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~-  206 (288)
T cd05583         162 ----------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGAS-  206 (288)
T ss_pred             ----------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCC-
Confidence                                              011235677899999877643  4468899999999999999987 


Q ss_pred             ccccccccCcchhh---cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFIL---SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~---~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                              ||....   ...+....+..... ..  +..++..+.++|.+||+.||++|||   +.++|+||||+..
T Consensus       207 --------p~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         207 --------PFTVDGEQNSQSEISRRILKSKP-PF--PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             --------CcccCcccchHHHHHHHHHccCC-CC--CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence                    774321   12222233333322 22  3346778999999999999999998   5677999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.97  E-value=1.2e-30  Score=244.17  Aligned_cols=245  Identities=13%  Similarity=0.209  Sum_probs=188.5

Q ss_pred             CCcceEEEEEecCCCce---eEEEEecccccc-CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLA-QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|+|.++.+|++.....   ...|++|..... .....+.|.+|+.++++++|+||+++++++..+...++++||+++++
T Consensus        12 lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~   91 (269)
T cd05065          12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGA   91 (269)
T ss_pred             ecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCc
Confidence            58888888887765433   345888877643 23345779999999999999999999999998899999999999999


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++..  +.+++..++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+..........      
T Consensus        92 L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg--~~~~~~~~~~~~------  163 (269)
T cd05065          92 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFG--LSRFLEDDTSDP------  163 (269)
T ss_pred             HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCc--cccccccCcccc------
Confidence            9998874  358999999999999999999999999999999999999999999999999  333111110000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                           .+         
T Consensus       164 ---------------------------------------------------------------------~~---------  165 (269)
T cd05065         164 ---------------------------------------------------------------------TY---------  165 (269)
T ss_pred             ---------------------------------------------------------------------cc---------
Confidence                                                                                 00         


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    .......++..|+|||.+....+...+|.|++|+++||+++ |..     
T Consensus       166 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~-----  210 (269)
T cd05065         166 ------------------------------TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER-----  210 (269)
T ss_pred             ------------------------------ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC-----
Confidence                                          00000112457999999988877788999999999999886 655     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+.....  ++.+..++..+.+++.+||..+|++||++++++.
T Consensus       211 ----p~~~-~~~~~~~~~i~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         211 ----PYWD-MSNQDVINAIEQDYR--LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             ----CCCC-CCHHHHHHHHHcCCc--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                7765 445555555544422  2223456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=1e-30  Score=252.30  Aligned_cols=247  Identities=18%  Similarity=0.222  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L   77 (400)
                      ||.|.++.|+++.+......|++|.+...  .....+.+.+|+.+++.++|+||++++++|.. ....++++||+ +++|
T Consensus        18 ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L   96 (328)
T cd07856          18 VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDL   96 (328)
T ss_pred             ecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCH
Confidence            58899999999988877778888866432  22245678899999999999999999999875 45789999999 6689


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ..++....+++..+..++.|++.|+.|||+.+++|+||+|.||+++.++.++|+|||  .+...    ...         
T Consensus        97 ~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg--~~~~~----~~~---------  161 (328)
T cd07856          97 HRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFG--LARIQ----DPQ---------  161 (328)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccc--ccccc----CCC---------
Confidence            988887788999999999999999999999999999999999999999999999999  32210    000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (328)
T cd07856         162 --------------------------------------------------------------------------------  161 (328)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   .....+++.|+|||++.. ..+...+|.|++|+++|+|++|..        
T Consensus       162 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~--------  204 (328)
T cd07856         162 -----------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP--------  204 (328)
T ss_pred             -----------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                         011245678999998765 456678999999999999999975        


Q ss_pred             cCcchhhcHHHHH---HHHHh------------------------CCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         317 IPYLFILSCRQAL---YLIAT------------------------NKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       317 ~P~~~~~~~~~~~---~~i~~------------------------~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                       ||.. .++....   ..+..                        ..+.... ....++..+.++|++||+.+|++|||+
T Consensus       205 -~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~  282 (328)
T cd07856         205 -LFPG-KDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA  282 (328)
T ss_pred             -CCCC-CCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH
Confidence             5543 2111111   11000                        0000000 012356789999999999999999999


Q ss_pred             HHHhcCccccccCC
Q psy9736         369 SLLLKHPFLKIARP  382 (400)
Q Consensus       369 ~~~l~hp~~~~~~~  382 (400)
                      ++++.||||.....
T Consensus       283 ~ell~~~~~~~~~~  296 (328)
T cd07856         283 AEALAHPYLAPYHD  296 (328)
T ss_pred             HHHhcCCccccccC
Confidence            99999999986444

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=6.7e-31  Score=245.57  Aligned_cols=243  Identities=14%  Similarity=0.182  Sum_probs=189.5

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+++.|+++....   ....+++|.+.... ....+.+.+|+.++++++|+|++++.+++...+..+++|||+++++
T Consensus        13 lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (268)
T cd05063          13 IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGA   92 (268)
T ss_pred             ecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCC
Confidence            5788888888776543   33468888876542 3345678899999999999999999999999899999999999999


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++..  ..+++..+..++.|++.|+.|||+.+++|+|+||+||+++.++.++++|||  .+..........      
T Consensus        93 L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg--~~~~~~~~~~~~------  164 (268)
T cd05063          93 LDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFG--LSRVLEDDPEGT------  164 (268)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCc--cceecccccccc------
Confidence            9998865  368999999999999999999999999999999999999999999999999  332111100000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (268)
T cd05063         165 --------------------------------------------------------------------------------  164 (268)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    ........++.|+|||++....+...+|.|++|+++||+++ |..     
T Consensus       165 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~-----  209 (268)
T cd05063         165 ------------------------------YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGER-----  209 (268)
T ss_pred             ------------------------------eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCC-----
Confidence                                          00001123457999999888777788999999999999987 876     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+......  +...+.+..+.+++.+||..+|++||++.++++
T Consensus       210 ----p~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         210 ----PYWD-MSNHEVMKAINDGFRL--PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             ----CCCc-CCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                7765 4455555555544322  223456788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=1e-30  Score=258.53  Aligned_cols=243  Identities=19%  Similarity=0.293  Sum_probs=188.1

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||.|+|+.|++++     +......||+|.+..... ...+.+.+|+.++..+. |+||+++++++...+..++|+||++
T Consensus        45 lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~  124 (401)
T cd05107          45 LGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCR  124 (401)
T ss_pred             ccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccC
Confidence            6999999999987     334556789998865432 23456889999999997 9999999999999899999999999


Q ss_pred             CCChHHHHhhc---------------------------------------------------------------------
Q psy9736          74 GGSLTDVVTET---------------------------------------------------------------------   84 (400)
Q Consensus        74 ~~~L~~~i~~~---------------------------------------------------------------------   84 (400)
                      +|+|.+++...                                                                     
T Consensus       125 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (401)
T cd05107         125 YGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADI  204 (401)
T ss_pred             CCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhh
Confidence            99999988532                                                                     


Q ss_pred             ------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          85 ------------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        85 ------------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                                                    .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++++|||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfG  284 (401)
T cd05107         205 ESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFG  284 (401)
T ss_pred             hccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecC
Confidence                                          24566788899999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+.........                                                                   
T Consensus       285 --la~~~~~~~~~-------------------------------------------------------------------  295 (401)
T cd05107         285 --LARDIMRDSNY-------------------------------------------------------------------  295 (401)
T ss_pred             --cceeccccccc-------------------------------------------------------------------
Confidence              33311000000                                                                   


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                        .......+++.|+|||++....+...+|.|
T Consensus       296 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  325 (401)
T cd05107         296 --------------------------------------------------ISKGSTFLPLKWMAPESIFNNLYTTLSDVW  325 (401)
T ss_pred             --------------------------------------------------ccCCCcCCCCceeChHHhcCCCCCcHhHHH
Confidence                                                              001122467789999999888777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHH-HHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYL-IATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~-i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      ++|+++|||++ |..         ||... ...+.... +..+..+..  +..++..+.+|+.+||..+|++||++++++
T Consensus       326 slGvil~e~l~~g~~---------P~~~~-~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~RPs~~ell  393 (401)
T cd05107         326 SFGILLWEIFTLGGT---------PYPEL-PMNEQFYNAIKRGYRMAK--PAHASDEIYEIMQKCWEEKFEIRPDFSQLV  393 (401)
T ss_pred             HHHHHHHHHHHcCCC---------CCCCC-CchHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            99999999997 665         76552 33333333 333332222  344778999999999999999999999998


Q ss_pred             cC
Q psy9736         373 KH  374 (400)
Q Consensus       373 ~h  374 (400)
                      +.
T Consensus       394 ~~  395 (401)
T cd05107         394 HL  395 (401)
T ss_pred             HH
Confidence            63

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=1.4e-30  Score=245.40  Aligned_cols=244  Identities=22%  Similarity=0.271  Sum_probs=188.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhC---CCCCcccccceeEeCCE-----EEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMREN---KHPNIVNYLDSYLVGEE-----LWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~~~~-----~~lv~e   70 (400)
                      +|.|.++.+|++.+......+++|.+.....  .....+.+|+.+++++   .|+|++++++++.....     .++++|
T Consensus         7 l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e   86 (287)
T cd07838           7 IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFE   86 (287)
T ss_pred             ecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEeh
Confidence            5889999999999877778888888764322  2234567888888776   59999999999987765     999999


Q ss_pred             ccCCCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          71 YLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        71 ~~~~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      |+. ++|.+++...   .+++..++.++.|++.||.|||+.+++|+|++|+||+++.++.++|+|||  .+.......  
T Consensus        87 ~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg--~~~~~~~~~--  161 (287)
T cd07838          87 HVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFG--LARIYSFEM--  161 (287)
T ss_pred             hcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccC--cceeccCCc--
Confidence            996 4888877642   48999999999999999999999999999999999999999999999999  333110000  


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (287)
T cd07838         162 --------------------------------------------------------------------------------  161 (287)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                            ......++..|+|||++.+..+...+|.|++|+++|+|++|.
T Consensus       162 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~  203 (287)
T cd07838         162 --------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR  203 (287)
T ss_pred             --------------------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence                                                  011124677899999998887778899999999999999996


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCC-----------------------CCcc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKK-----------------------PEIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~-----------------------~~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                      -         ||.. .+..+....+.....                       .... .....+..+.+||++||..||+
T Consensus       204 ~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  273 (287)
T cd07838         204 P---------LFRG-TSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPH  273 (287)
T ss_pred             C---------cccC-CChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCc
Confidence            4         5544 454444444432100                       0000 0113456789999999999999


Q ss_pred             hhhcHHHHhcCccc
Q psy9736         364 TRASASLLLKHPFL  377 (400)
Q Consensus       364 ~R~s~~~~l~hp~~  377 (400)
                      +||++.++++||||
T Consensus       274 ~Rp~~~~il~~~~~  287 (287)
T cd07838         274 KRISAFEALQHPYF  287 (287)
T ss_pred             cCCCHHHHhcCcCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=2.1e-30  Score=242.75  Aligned_cols=244  Identities=18%  Similarity=0.236  Sum_probs=179.8

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.  +......+++|...... ....+.+.+|+.+++.++|+||+++++.+......+++|||+++++|
T Consensus         3 lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   82 (268)
T cd05086           3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDL   82 (268)
T ss_pred             CCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcH
Confidence            6899999999874  22223445566554332 23456789999999999999999999999988899999999999999


Q ss_pred             HHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTET-----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++.+.     .+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........     
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg--~~~~~~~~~~~-----  155 (268)
T cd05086          83 KSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYG--IGPSRYKEDYI-----  155 (268)
T ss_pred             HHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccc--cccccCcchhh-----
Confidence            9988642     35677788999999999999999999999999999999999999999999  32210000000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (268)
T cd05086         156 --------------------------------------------------------------------------------  155 (268)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-------CCCcccCCCCccchhhhhcC
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-------NKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                      .......|++.|+|||++...       .+...+|.||+|+++|||++
T Consensus       156 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~  203 (268)
T cd05086         156 --------------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFE  203 (268)
T ss_pred             --------------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHh
Confidence                                            001123567788888887532       23357899999999999987


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch---hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +..        .||.. .+..+....+.++....+..   ...++..+.++++.|| .+|++||+++++++
T Consensus       204 ~~~--------~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         204 NAA--------QPYSH-LSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCC--------CCCCC-CCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            533        15544 45555555555553322211   2236788999999999 68999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=9.7e-31  Score=248.77  Aligned_cols=246  Identities=23%  Similarity=0.311  Sum_probs=186.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC----------EEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE----------ELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----------~~~lv   68 (400)
                      +|.|.++.||++........|++|.+....  ......+.+|+.++++++|+||+++++++....          .++++
T Consensus        15 lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv   94 (302)
T cd07864          15 IGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLV   94 (302)
T ss_pred             ecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEE
Confidence            588999999999988777888888876443  223356778999999999999999999887544          78999


Q ss_pred             EeccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          69 MEYLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        69 ~e~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +||+++ ++...+...  .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+........
T Consensus        95 ~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg--~~~~~~~~~~  171 (302)
T cd07864          95 FEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG--LARLYNSEES  171 (302)
T ss_pred             EcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc--ccccccCCcc
Confidence            999976 777766643  68999999999999999999999999999999999999999999999999  3331111000


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (302)
T cd07864         172 --------------------------------------------------------------------------------  171 (302)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                            .+.....++..|+|||++... .+...+|.|++|+++|+|++
T Consensus       172 --------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~  213 (302)
T cd07864         172 --------------------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT  213 (302)
T ss_pred             --------------------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHh
Confidence                                                  001112346679999987653 34578999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHh---CCCCC----c--------------------chhhhhcHHHHHHHHHhh
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIAT---NKKPE----I--------------------KEKEKLSQIFQDFLDQCL  358 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~---~~~~~----~--------------------~~~~~~s~~~~dli~~~L  358 (400)
                      |..         ||.. .+....+..+.+   ...+.    +                    .....++..+.+++.+||
T Consensus       214 g~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  283 (302)
T cd07864         214 KKP---------IFQA-NQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML  283 (302)
T ss_pred             CCC---------CCCC-CChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence            965         6654 333333322222   21110    0                    011235778999999999


Q ss_pred             hhhhhhhhcHHHHhcCccc
Q psy9736         359 EEEVETRASASLLLKHPFL  377 (400)
Q Consensus       359 ~~dP~~R~s~~~~l~hp~~  377 (400)
                      ..||++|||+.++++||||
T Consensus       284 ~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         284 TLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cCChhhCCCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=1e-30  Score=242.62  Aligned_cols=232  Identities=16%  Similarity=0.216  Sum_probs=178.7

Q ss_pred             CCcceEEEEEecCCCcee----------EEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFF----------SKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~----------~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ||+|+++.|+++......          .+|++|........ ...+.+|+.+++.++|+||+++++++.. ...++++|
T Consensus         3 lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e   80 (259)
T cd05037           3 LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEE   80 (259)
T ss_pred             ccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEE
Confidence            689999999888775544          56888876544432 6778999999999999999999999887 77899999


Q ss_pred             ccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-------ceEEeccchhhhhhh
Q psy9736          71 YLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-------SVKLSKWNRFIATKL  141 (400)
Q Consensus        71 ~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-------~~~l~dfg~~~~~~~  141 (400)
                      |+++++|.+++...  .+++..+..++.|++.||.|||+++++|+||||+||+++.++       .++++|||  .+...
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg--~a~~~  158 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG--IPITV  158 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC--ccccc
Confidence            99999999998753  589999999999999999999999999999999999999887       79999999  33311


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      ..                                                                              
T Consensus       159 ~~------------------------------------------------------------------------------  160 (259)
T cd05037         159 LS------------------------------------------------------------------------------  160 (259)
T ss_pred             cc------------------------------------------------------------------------------
Confidence            10                                                                              


Q ss_pred             ccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC--CCCcccCCCCccch
Q psy9736         222 EELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK--NKNQTTPPTGLTGS  299 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~d~~s~g~~  299 (400)
                                                                   .....++..|+|||++...  .+...+|.|++|++
T Consensus       161 ---------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         161 ---------------------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             ---------------------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence                                                         0011345568889988765  56678999999999


Q ss_pred             hhhhcCC-CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         300 ILEFLGP-HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       300 ~~~~~~g-d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      +|++++| ..         |+.. .+...........  ...+.+  ....+.++|.+||..+|++|||+.++++
T Consensus       196 ~~~l~~~~~~---------p~~~-~~~~~~~~~~~~~--~~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         196 LLEICSNGEE---------PLST-LSSSEKERFYQDQ--HRLPMP--DCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHhCCCC---------Cccc-CCchhHHHHHhcC--CCCCCC--CchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999985 43         5544 2222222111111  111111  2368999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.97  E-value=2e-30  Score=246.30  Aligned_cols=244  Identities=15%  Similarity=0.234  Sum_probs=183.8

Q ss_pred             CCcceEEEEEecCCC----------------ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC
Q psy9736           1 MKRGVTIDRFSSDDR----------------RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~----------------~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   63 (400)
                      ||.|+|+.||.+...                .....+++|...... ....+.+.+|+.+++.++|+||+++++++..++
T Consensus        13 lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~   92 (296)
T cd05095          13 LGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSD   92 (296)
T ss_pred             ccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            689999999987432                234568888876442 223467899999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEe
Q psy9736          64 ELWVVMEYLPGGSLTDVVTET------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS  131 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~  131 (400)
                      ..++++||+++++|.+++...            .+++..+..++.|++.|+.|||+.+++|+||||+||+++.++.++++
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~  172 (296)
T cd05095          93 PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIA  172 (296)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEec
Confidence            999999999999999988643            25677899999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+..........                                                               
T Consensus       173 dfg--~~~~~~~~~~~~---------------------------------------------------------------  187 (296)
T cd05095         173 DFG--MSRNLYSGDYYR---------------------------------------------------------------  187 (296)
T ss_pred             cCc--ccccccCCccee---------------------------------------------------------------
Confidence            999  333111000000                                                               


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                            ......+++.|+|||+.....++..+
T Consensus       188 ------------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~  213 (296)
T cd05095         188 ------------------------------------------------------IQGRAVLPIRWMSWESILLGKFTTAS  213 (296)
T ss_pred             ------------------------------------------------------ccCcCcCccccCCHHHHhcCCccchh
Confidence                                                                  01112345679999988877777899


Q ss_pred             CCCCccchhhhhcC--CCCcccccccccCcchhhcHHHHHHHHHh-----CCCCCcchhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         292 PPTGLTGSILEFLG--PHKWSFQPHFLIPYLFILSCRQALYLIAT-----NKKPEIKEKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       292 d~~s~g~~~~~~~~--gd~ws~g~~~~~P~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                      |.||+|+++|||++  |..         ||.. .+..+.......     .....++.+..++..+.+|+.+||+.||++
T Consensus       214 DiwSlG~~l~el~~~~~~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  283 (296)
T cd05095         214 DVWAFGVTLWEILTLCKEQ---------PYSQ-LSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKE  283 (296)
T ss_pred             hhhHHHHHHHHHHHhCCCC---------Cccc-cChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCccc
Confidence            99999999999997  333         6654 333332222211     111122223346778999999999999999


Q ss_pred             hhcHHHHhc
Q psy9736         365 RASASLLLK  373 (400)
Q Consensus       365 R~s~~~~l~  373 (400)
                      |||+.++++
T Consensus       284 Rp~~~~i~~  292 (296)
T cd05095         284 RPSFQEIHA  292 (296)
T ss_pred             CCCHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.97  E-value=1.5e-30  Score=241.32  Aligned_cols=240  Identities=20%  Similarity=0.250  Sum_probs=187.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|+++.||++.+.. ...+++|.+.... .....+.+|+++++++.|+|++++++++......++++||+++++|.++
T Consensus        12 ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   89 (256)
T cd05112          12 IGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDY   89 (256)
T ss_pred             ecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHH
Confidence            5889888898876542 3457777665332 2346789999999999999999999999988899999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.+++.++.|||+.+++|+||+|+||+++.++.++|+|||  .+.........           
T Consensus        90 ~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g--~~~~~~~~~~~-----------  156 (256)
T cd05112          90 LRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFG--MTRFVLDDQYT-----------  156 (256)
T ss_pred             HHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCc--ceeecccCccc-----------
Confidence            864  358999999999999999999999999999999999999999999999999  33211000000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (256)
T cd05112         157 --------------------------------------------------------------------------------  156 (256)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                 ......++..|+|||++....+...+|.|++|+++|||++ |..         
T Consensus       157 ---------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~---------  200 (256)
T cd05112         157 ---------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT---------  200 (256)
T ss_pred             ---------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC---------
Confidence                                       0011134567999999887777788999999999999998 765         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. ....+....+..+.....  +...+..+.+|+.+||..+|++|||+.+++++
T Consensus       201 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         201 PYEN-RSNSEVVETINAGFRLYK--PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             CCCc-CCHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            7765 444555555554433222  22357789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.4e-30  Score=242.36  Aligned_cols=239  Identities=17%  Similarity=0.245  Sum_probs=190.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|.|.++.||++..+. ...+++|.+.... ...+.+.+|+.++++++|+||+++++++..+...++++||+++++|.++
T Consensus        14 ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   91 (261)
T cd05034          14 LGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDF   91 (261)
T ss_pred             eccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHH
Confidence            5889999999887653 3568888776433 3456789999999999999999999999988899999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.+++.|+.|||+.+++|+||+|+||+++.++.++++|||  .+..........         
T Consensus        92 i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g--~~~~~~~~~~~~---------  160 (261)
T cd05034          92 LKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFG--LARLIEDDEYTA---------  160 (261)
T ss_pred             HhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccc--cceeccchhhhh---------
Confidence            8653   58999999999999999999999999999999999999999999999999  333211100000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (261)
T cd05034         161 --------------------------------------------------------------------------------  160 (261)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   .....++..|+|||.+.+...+..+|.|++|+++|++++ |..        
T Consensus       161 -----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~--------  203 (261)
T cd05034         161 -----------------------------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV--------  203 (261)
T ss_pred             -----------------------------hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCC--------
Confidence                                         001123457999999888777788999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+..+.....  +...+..+.+++.+||..+|++||+++++.+
T Consensus       204 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         204 -PYPG-MTNREVLEQVERGYRMPR--PPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence             7765 555666666665533222  2335778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=2.1e-30  Score=243.95  Aligned_cols=241  Identities=16%  Similarity=0.229  Sum_probs=185.8

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||.|+++.||+++    +.....+|++|....... ...+.+.+|+.+++.++|+||+++++++.. ...+++++|++++
T Consensus        15 lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g   93 (279)
T cd05109          15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYG   93 (279)
T ss_pred             cCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCC
Confidence            6889999998874    444455688888764432 235678899999999999999999998875 4577899999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..+  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  ++..........     
T Consensus        94 ~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG--~~~~~~~~~~~~-----  166 (279)
T cd05109          94 CLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFG--LARLLDIDETEY-----  166 (279)
T ss_pred             CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCC--ceeeccccccee-----
Confidence            999998753  68999999999999999999999999999999999999999999999999  443221110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (279)
T cd05109         167 --------------------------------------------------------------------------------  166 (279)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......+++.|+|||++.+..+...+|.|++|+++|||++ |..    
T Consensus       167 --------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~----  210 (279)
T cd05109         167 --------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAK----  210 (279)
T ss_pred             --------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCC----
Confidence                                            0001134567999999988877788999999999999998 554    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.. .........+..+..+..  +...+..+.+++.+||..||++||++.+++.
T Consensus       211 -----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         211 -----PYDG-IPAREIPDLLEKGERLPQ--PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             -----CCCC-CCHHHHHHHHHCCCcCCC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 6544 344444444444433322  3447889999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=1.7e-30  Score=252.41  Aligned_cols=244  Identities=18%  Similarity=0.273  Sum_probs=184.9

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||.|+|+.||.+.     .......||+|.+..... .....+.+|+.++.++ +|+||+++++++... ..+++++||+
T Consensus        15 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~   94 (343)
T cd05103          15 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC   94 (343)
T ss_pred             ccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEecc
Confidence            6999999999986     334556788888764332 2345688999999999 789999999987654 4678999999


Q ss_pred             CCCChHHHHhhc--------------------------------------------------------------------
Q psy9736          73 PGGSLTDVVTET--------------------------------------------------------------------   84 (400)
Q Consensus        73 ~~~~L~~~i~~~--------------------------------------------------------------------   84 (400)
                      ++++|.+++...                                                                    
T Consensus        95 ~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (343)
T cd05103          95 KFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKK  174 (343)
T ss_pred             CCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhc
Confidence            999999887531                                                                    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccccccee
Q psy9736          85 CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVY  164 (400)
Q Consensus        85 ~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  164 (400)
                      .+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++++|||  .+..........                
T Consensus       175 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg--~~~~~~~~~~~~----------------  236 (343)
T cd05103         175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFG--LARDIYKDPDYV----------------  236 (343)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecc--cccccccCcchh----------------
Confidence            25677788899999999999999999999999999999999999999999  443211100000                


Q ss_pred             eehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccC
Q psy9736         165 TAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTS  244 (400)
Q Consensus       165 ~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  244 (400)
                                                                                                      
T Consensus       237 --------------------------------------------------------------------------------  236 (343)
T cd05103         237 --------------------------------------------------------------------------------  236 (343)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccccCcchhh
Q psy9736         245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFIL  323 (400)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~  323 (400)
                                           ......+++.|+|||++....+...+|.|++|+++|+|++ |..         ||....
T Consensus       237 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~---------p~~~~~  286 (343)
T cd05103         237 ---------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS---------PYPGVK  286 (343)
T ss_pred             ---------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCC---------CCCCcc
Confidence                                 0011234567999999988877788999999999999996 655         765533


Q ss_pred             cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       324 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ........+..+.....  +...++.+.+++.+||+.||++|||+.++++|
T Consensus       287 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         287 IDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             ccHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            33333333334433333  23367789999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.97  E-value=2.3e-30  Score=241.07  Aligned_cols=238  Identities=14%  Similarity=0.221  Sum_probs=186.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.||++.... ..++++|.+.... ...+.+.+|+.+++.++|+||+++++.+.. ...++++||+++++|.++
T Consensus        14 lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~   90 (260)
T cd05073          14 LGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF   90 (260)
T ss_pred             ecCccceEEEEEEecC-CccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHH
Confidence            6899999999987543 3457888765432 245678899999999999999999998887 778999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.|+.|||+.+++|+||+|+||+++..+.++++|||  .+..+......          
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~--~~~~~~~~~~~----------  158 (260)
T cd05073          91 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG--LARVIEDNEYT----------  158 (260)
T ss_pred             HHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCc--ceeeccCCCcc----------
Confidence            8652   47888899999999999999999999999999999999999999999999  33311100000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (260)
T cd05073         159 --------------------------------------------------------------------------------  158 (260)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......++..|+|||++....+...+|.|++|+++|++++ |..        
T Consensus       159 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~--------  202 (260)
T cd05073         159 ----------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI--------  202 (260)
T ss_pred             ----------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCC--------
Confidence                                        0011134567999999988777788999999999999998 776        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+..+.....  +...+..+.+++.+||+.+|++||++.++++
T Consensus       203 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         203 -PYPG-MSNPEVIRALERGYRMPR--PENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             -CCCC-CCHHHHHHHHhCCCCCCC--cccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence             7765 444445555555433322  3457788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=2.9e-30  Score=242.81  Aligned_cols=245  Identities=18%  Similarity=0.237  Sum_probs=187.1

Q ss_pred             CCcceEEEEEecCC----CceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDD----RRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~----~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~   73 (400)
                      +|.|+++.|+++..    ......+++|.+...... ..+.+.+|+.+++.++|+||+++++++..  +...++++||++
T Consensus        12 ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~   91 (284)
T cd05038          12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLP   91 (284)
T ss_pred             eccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCC
Confidence            58899999998863    344677888887655443 46779999999999999999999998876  457899999999


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +++|.+++...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++++|||  .+..........   
T Consensus        92 ~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg--~~~~~~~~~~~~---  166 (284)
T cd05038          92 SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFG--LAKVLPEDKDYY---  166 (284)
T ss_pred             CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccc--cccccccCCcce---
Confidence            99999999765  48999999999999999999999999999999999999999999999999  443221110000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (284)
T cd05038         167 --------------------------------------------------------------------------------  166 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       .......++..|+|||.+........+|.|++|+++|||++|..   
T Consensus       167 ---------------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~---  210 (284)
T cd05038         167 ---------------------------------YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD---  210 (284)
T ss_pred             ---------------------------------eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC---
Confidence                                             00011134456899999988877788999999999999999975   


Q ss_pred             ccccccCcchhhcH-------------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         312 QPHFLIPYLFILSC-------------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       312 g~~~~~P~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                            |+......             .......+... ...+.+...+..+.+|+.+||..+|++|||+.++++
T Consensus       211 ------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         211 ------PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG-ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             ------CcccccchhccccccccccccHHHHHHHHHcC-CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                  54432111             22222222221 122223446678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=1.1e-30  Score=246.94  Aligned_cols=242  Identities=16%  Similarity=0.284  Sum_probs=188.3

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      +|.|+|+.|+.+...     .....|++|.+..... ...+.+.+|+.+++++.|+||+++++++..+...++++||+++
T Consensus        13 lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (288)
T cd05050          13 IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAY   92 (288)
T ss_pred             ccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCC
Confidence            688999999988643     3456788887764432 2346688999999999999999999999988899999999999


Q ss_pred             CChHHHHhhc-----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEe
Q psy9736          75 GSLTDVVTET-----------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS  131 (400)
Q Consensus        75 ~~L~~~i~~~-----------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~  131 (400)
                      ++|.+++...                       .+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++++
T Consensus        93 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~  172 (288)
T cd05050          93 GDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA  172 (288)
T ss_pred             CCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEEC
Confidence            9999988632                       36788889999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+..........                                                               
T Consensus       173 dfg--~~~~~~~~~~~~---------------------------------------------------------------  187 (288)
T cd05050         173 DFG--LSRNIYSADYYK---------------------------------------------------------------  187 (288)
T ss_pred             ccc--cceecccCcccc---------------------------------------------------------------
Confidence            999  332110000000                                                               


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                            ......++..|+|||++....+...+
T Consensus       188 ------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~  213 (288)
T cd05050         188 ------------------------------------------------------ASENDAIPIRWMPPESIFYNRYTTES  213 (288)
T ss_pred             ------------------------------------------------------ccCCCccChhhcCHHHHhcCCCCchh
Confidence                                                                  00111234579999998888777889


Q ss_pred             CCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHH
Q psy9736         292 PPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASL  370 (400)
Q Consensus       292 d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~  370 (400)
                      |.||+|+++|||++ |..         ||.. .+..+....+..+.....  +...+..+.+||.+||+.||++|||+.|
T Consensus       214 Dv~slG~il~el~~~~~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~e  281 (288)
T cd05050         214 DVWAYGVVLWEIFSYGMQ---------PYYG-MAHEEVIYYVRDGNVLSC--PDNCPLELYNLMRLCWSKLPSDRPSFAS  281 (288)
T ss_pred             HHHHHHHHHHHHHhCCCC---------CCCC-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence            99999999999997 654         7765 455556555555543222  3346788999999999999999999999


Q ss_pred             Hhc
Q psy9736         371 LLK  373 (400)
Q Consensus       371 ~l~  373 (400)
                      +++
T Consensus       282 l~~  284 (288)
T cd05050         282 INR  284 (288)
T ss_pred             HHH
Confidence            874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=1.4e-30  Score=245.71  Aligned_cols=254  Identities=17%  Similarity=0.198  Sum_probs=183.5

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~   74 (400)
                      +|.|+|+.||.+.    +......|++|.+........+.+.+|+.++++++|+||+++++++..  ....++++||+++
T Consensus        12 lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   91 (284)
T cd05081          12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPY   91 (284)
T ss_pred             ccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCC
Confidence            6899999998875    455667889998876655556788999999999999999999987643  3468999999999


Q ss_pred             CChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........    
T Consensus        92 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg--~~~~~~~~~~~~----  165 (284)
T cd05081          92 GSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFG--LTKVLPQDKEYY----  165 (284)
T ss_pred             CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCc--ccccccCCCcce----
Confidence            9999998643  58999999999999999999999999999999999999999999999999  443221110000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (284)
T cd05081         166 --------------------------------------------------------------------------------  165 (284)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......++..|+|||++.+..+...+|.|++|+++|||++|.-....
T Consensus       166 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~  213 (284)
T cd05081         166 --------------------------------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS  213 (284)
T ss_pred             --------------------------------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence                                            000111234568999998887777889999999999999987431000


Q ss_pred             ccc-----ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHF-----LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~-----~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ...     ..+-.........+..+.... ...+.+..++..+.+|+.+||..+|++|||+.++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         214 PPAEFMRMMGNDKQGQMIVYHLIELLKNN-GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             cchhhhhhcccccccccchHHHHHHHhcC-CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            000     000000000001111222221 122223457788999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=2.2e-30  Score=250.49  Aligned_cols=244  Identities=15%  Similarity=0.232  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCCC-------ceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDR-------RFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-------~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||.|+|+.||.+.+.       .....|++|...... ....+.+.+|+.+++++ +|+||+++++++..++..++++||
T Consensus        20 ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   99 (334)
T cd05100          20 LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEY   99 (334)
T ss_pred             eccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEec
Confidence            689999999988532       122457888765432 22346788999999999 899999999999988899999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .++...+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||
T Consensus       100 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg  179 (334)
T cd05100         100 ASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFG  179 (334)
T ss_pred             CCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcc
Confidence            9999999988642                 36778889999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+..........                                                                  
T Consensus       180 --~~~~~~~~~~~~------------------------------------------------------------------  191 (334)
T cd05100         180 --LARDVHNIDYYK------------------------------------------------------------------  191 (334)
T ss_pred             --cceecccccccc------------------------------------------------------------------
Confidence              333111000000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......++..|+|||++.+..+...+|+|
T Consensus       192 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  220 (334)
T cd05100         192 ---------------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVW  220 (334)
T ss_pred             ---------------------------------------------------cccCCCcCceEcCHHHhccCCcCchhhhH
Confidence                                                               01112344679999999888777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|+++|||++ |..         ||.. .+..+....+..+.....  +...+..+.+|+.+||+.+|++|||+.++++
T Consensus       221 slG~il~el~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rps~~ell~  288 (334)
T cd05100         221 SFGVLLWEIFTLGGS---------PYPG-IPVEELFKLLKEGHRMDK--PANCTHELYMIMRECWHAVPSQRPTFKQLVE  288 (334)
T ss_pred             HHHHHHHHHHhcCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            99999999998 554         6655 455555555555433333  3346778999999999999999999999987


Q ss_pred             Cc
Q psy9736         374 HP  375 (400)
Q Consensus       374 hp  375 (400)
                      +-
T Consensus       289 ~l  290 (334)
T cd05100         289 DL  290 (334)
T ss_pred             HH
Confidence            63

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=2.5e-30  Score=249.89  Aligned_cols=253  Identities=19%  Similarity=0.253  Sum_probs=186.3

Q ss_pred             CCcceEEEEEecCCCce--eEEEEecccccc--CcchHHHHHHHHHHHHhC-CCCCcccccceeEeC----CEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRF--FSKILSNPITLA--QQPKKELIINEILVMREN-KHPNIVNYLDSYLVG----EELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~--~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~----~~~~lv~e~   71 (400)
                      ||.|.++.|+.+.+...  ...+|+|.+...  .....+.+.+|+.+++++ +|+||+++++.+...    ..++++++|
T Consensus         8 lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~   87 (332)
T cd07857           8 LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEEL   87 (332)
T ss_pred             ccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEec
Confidence            68899999999988766  677888876532  222346678999999999 599999999865422    457889999


Q ss_pred             cCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          72 LPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        72 ~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +. ++|.+.+.. ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..+.......  
T Consensus        88 ~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg--~a~~~~~~~~~~--  162 (332)
T cd07857          88 ME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFG--LARGFSENPGEN--  162 (332)
T ss_pred             cc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCC--Cceecccccccc--
Confidence            85 588888764 478999999999999999999999999999999999999999999999999  433111100000  


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (332)
T cd07857         163 --------------------------------------------------------------------------------  162 (332)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                       ........||+.|+|||++.+ ..+...+|.|++|+++|++++|.. 
T Consensus       163 ---------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~-  208 (332)
T cd07857         163 ---------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKP-  208 (332)
T ss_pred             ---------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCc-
Confidence                                             000123468889999998765 455678999999999999999975 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhC-------------------------CCC--Ccch-hhhhcHHHHHHHHHhhhhh
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATN-------------------------KKP--EIKE-KEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~-------------------------~~~--~~~~-~~~~s~~~~dli~~~L~~d  361 (400)
                              ||.. .+....+..+...                         ..+  .+.. ....+..+.+|+.+||+.|
T Consensus       209 --------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  279 (332)
T cd07857         209 --------VFKG-KDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFD  279 (332)
T ss_pred             --------CCCC-CCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCC
Confidence                    5543 2222222111110                         000  0100 1124678999999999999


Q ss_pred             hhhhhcHHHHhcCccccccC
Q psy9736         362 VETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~  381 (400)
                      |++|||+.+++.|||+.+-+
T Consensus       280 P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         280 PTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             cccCCCHHHHhcChhhhhhc
Confidence            99999999999999998644

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=5.7e-30  Score=241.04  Aligned_cols=244  Identities=20%  Similarity=0.310  Sum_probs=185.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++........|++|....... .......+|+..+++++ |+|++++++++..++..+++|||+ +++|.
T Consensus         7 ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~   85 (283)
T cd07830           7 LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLY   85 (283)
T ss_pred             eccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHH
Confidence            6899999999998877777888887654322 12234567999999998 999999999999999999999999 77998


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +.+...   .+++..+..++.|++.++.|||+++++|+||+|+||+++.++.++|+|||  .+...    ...       
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~--~~~~~----~~~-------  152 (283)
T cd07830          86 QLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFG--LAREI----RSR-------  152 (283)
T ss_pred             HHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecc--cceec----cCC-------
Confidence            888653   68999999999999999999999999999999999999999999999999  33211    000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       153 --------------------------------------------------------------------------------  152 (283)
T cd07830         153 --------------------------------------------------------------------------------  152 (283)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                   .......++..|+|||++... .....+|.|++|+++++|++|..      
T Consensus       153 -----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~------  197 (283)
T cd07830         153 -----------------------------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRP------  197 (283)
T ss_pred             -----------------------------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCC------
Confidence                                         001223567889999988643 34578999999999999999964      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC--------------------------CCcch-hhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK--------------------------PEIKE-KEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~--------------------------~~~~~-~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                         ||.. .+..+....+.....                          ..+.. ....+..+.+||++||+.||++|||
T Consensus       198 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  273 (283)
T cd07830         198 ---LFPG-SSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT  273 (283)
T ss_pred             ---ccCC-CChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence               5544 222222222211100                          00000 0112567999999999999999999


Q ss_pred             HHHHhcCccc
Q psy9736         368 ASLLLKHPFL  377 (400)
Q Consensus       368 ~~~~l~hp~~  377 (400)
                      +.|++.||||
T Consensus       274 ~~ei~~~~~~  283 (283)
T cd07830         274 ASQALQHPYF  283 (283)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.97  E-value=3.2e-30  Score=242.69  Aligned_cols=242  Identities=15%  Similarity=0.214  Sum_probs=190.2

Q ss_pred             CCcceEEEEEecCCCc----eeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR----FFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~----~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~   74 (400)
                      +|.|+|+.|+.+....    ....|++|.+.... ....+.+.+|+.+++.++|+||+++++++.. +...+++++|+++
T Consensus        14 i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~   93 (280)
T cd05043          14 LQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNW   93 (280)
T ss_pred             ecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCC
Confidence            5889999999887655    35678888765332 2345668899999999999999999998765 4678999999999


Q ss_pred             CChHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          75 GSLTDVVTE---------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        75 ~~L~~~i~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      ++|.+++..         ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++++|||  +++.+....
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g--~~~~~~~~~  171 (280)
T cd05043          94 GNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA--LSRDLFPMD  171 (280)
T ss_pred             CcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC--CcccccCCc
Confidence            999998864         348899999999999999999999999999999999999999999999999  443221111


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ...                                                                             
T Consensus       172 ~~~-----------------------------------------------------------------------------  174 (280)
T cd05043         172 YHC-----------------------------------------------------------------------------  174 (280)
T ss_pred             eEE-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                              ......++..|+|||++.+..+...+|.||+|+++||+++
T Consensus       175 ----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~  214 (280)
T cd05043         175 ----------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT  214 (280)
T ss_pred             ----------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhc
Confidence                                                    0011134567999999988877788999999999999998


Q ss_pred             -CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         306 -PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       306 -gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       |..         ||.. .++.+....+..+....  .+..+++.+.+++.+||..||++|||+.++++
T Consensus       215 ~g~~---------p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         215 LGQT---------PYVE-IDPFEMAAYLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCCC---------CcCc-CCHHHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             765         7766 56666555555543322  23446789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0664|consensus

Probab=99.97  E-value=7e-33  Score=246.74  Aligned_cols=192  Identities=19%  Similarity=0.317  Sum_probs=162.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~   73 (400)
                      ||+|.|+.||..+|.+.+..|++|++..-  +-..-+++.+|+.+|..++|.|++..++..+-..     .+|+++|+++
T Consensus        61 IGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ  140 (449)
T KOG0664|consen   61 IGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ  140 (449)
T ss_pred             ccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH
Confidence            79999999999999999999999998532  2223478899999999999999999998876442     4688999995


Q ss_pred             CCChHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      . +|-..|- ...++...++-+++||+.||.|||+.+|.||||||.|+++++++.+||+|||  +++....+....    
T Consensus       141 S-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFG--LARvee~d~~~h----  213 (449)
T KOG0664|consen  141 S-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFG--LARTWDQRDRLN----  213 (449)
T ss_pred             h-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccc--cccccchhhhhh----
Confidence            5 7877664 4579999999999999999999999999999999999999999999999999  777544433322    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                        .+....|.-|+|||+++|..                          .|....|+||+||++.|+|--...|+.
T Consensus       214 --MTqEVVTQYYRAPEiLMGaR--------------------------hYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  214 --MTHEVVTQYYRAPELLMGAR--------------------------RYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             --hHHHHHHHHhccHHHhhcch--------------------------hhcCccceehhhHHHHHHHhhhhhhhc
Confidence              34455677799999999988                          899999999999999999988777765

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.97  E-value=5.4e-30  Score=237.66  Aligned_cols=232  Identities=20%  Similarity=0.268  Sum_probs=183.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|+++.|+.+..  ....+++|.....  ...+.+.+|+.+++.++|+|++++++++..+ ..++++||+++++|.++
T Consensus        14 lg~g~~g~v~~~~~--~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~   88 (254)
T cd05083          14 IGEGEFGAVLQGEY--TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNF   88 (254)
T ss_pred             eccCCCCceEeccc--CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHH
Confidence            58899999998753  4567888887543  2446789999999999999999999988754 47899999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  .+.......            
T Consensus        89 l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg--~~~~~~~~~------------  154 (254)
T cd05083          89 LRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFG--LARVGSMGV------------  154 (254)
T ss_pred             HHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCc--cceeccccC------------
Confidence            8643   47899999999999999999999999999999999999999999999999  332110000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (254)
T cd05083         155 --------------------------------------------------------------------------------  154 (254)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                    .....+..|+|||.+.+..+...+|.|++|+++|||++ |..        
T Consensus       155 ------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~--------  196 (254)
T cd05083         155 ------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRA--------  196 (254)
T ss_pred             ------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCC--------
Confidence                                          00012346888998887777788999999999999997 665        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+.++..+..  +..++..+.+|+++||..+|++||++++++.
T Consensus       197 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         197 -PYPK-MSLKEVKECVEKGYRMEP--PEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             -CCcc-CCHHHHHHHHhCCCCCCC--CCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             6665 455555555555533322  3457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=9.8e-30  Score=239.33  Aligned_cols=241  Identities=15%  Similarity=0.239  Sum_probs=188.3

Q ss_pred             CCcceEEEEEecCC----CceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD----RRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~----~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +|.|+++.+|++..    ......+++|....... ...+.+.+|+.++++++|+||+++++++.. ...++++||++++
T Consensus        15 ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g   93 (279)
T cd05057          15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLG   93 (279)
T ss_pred             ecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCC
Confidence            68899999988753    33344688887654432 234678899999999999999999998886 7889999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||  .+..........     
T Consensus        94 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg--~~~~~~~~~~~~-----  166 (279)
T cd05057          94 CLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFG--LAKLLDVDEKEY-----  166 (279)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCc--ccccccCcccce-----
Confidence            999998753  68999999999999999999999999999999999999999999999999  444221100000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (279)
T cd05057         167 --------------------------------------------------------------------------------  166 (279)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......++..|+|||.+....+...+|.|++|+++||+++ |..    
T Consensus       167 --------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~----  210 (279)
T cd05057         167 --------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK----  210 (279)
T ss_pred             --------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCC----
Confidence                                            0001123567999999887777788999999999999998 765    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.. .+..+....+..+.....  +...+..+.+++.+||..||++|||+.++++
T Consensus       211 -----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         211 -----PYEG-IPAVEIPDLLEKGERLPQ--PPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             -----CCCC-CCHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                 7665 455555555555433322  3346778999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0608|consensus

Probab=99.97  E-value=6.5e-31  Score=256.47  Aligned_cols=283  Identities=19%  Similarity=0.235  Sum_probs=206.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||=|.|+.|.+++...+...+|.|-+...+-.   ....+..|-+||..-.++.||++|-.|++++.+|+||+|++||++
T Consensus       637 iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDm  716 (1034)
T KOG0608|consen  637 IGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDM  716 (1034)
T ss_pred             ecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccH
Confidence            68899999999877777666666665433211   224467899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++-+ +.|++..+++++.++..|+++.|..|+|||||||+|||||.+|.+||+||| +|.. +.+..+..        
T Consensus       717 MSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFG-LCTG-fRWTHdsk--------  786 (1034)
T KOG0608|consen  717 MSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG-LCTG-FRWTHDSK--------  786 (1034)
T ss_pred             HHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecc-cccc-ceeccccc--------
Confidence            987754 679999999999999999999999999999999999999999999999999 3333 22222222        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                  .|..++.                       .+++. 
T Consensus       787 --------------------------------------------YYq~gdH-----------------------~RqDS-  798 (1034)
T KOG0608|consen  787 --------------------------------------------YYQEGDH-----------------------HRQDS-  798 (1034)
T ss_pred             --------------------------------------------cccCCCc-----------------------ccccc-
Confidence                                                        1111110                       00000 


Q ss_pred             cccccccCCCCCCCCCCCCCCCC-------CCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQP-------PPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                              ....-.|+|.+.+..       ..+++-..-..+||+.|+|||++.+..+...-|.|+.|+|+|||+.|.. 
T Consensus       799 --------mep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~-  869 (1034)
T KOG0608|consen  799 --------MEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP-  869 (1034)
T ss_pred             --------CCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC-
Confidence                    000001111111110       1112223445699999999999999999999999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhc---HHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRAS---ASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s---~~~~l~hp~~~~~  380 (400)
                              ||.. ..+.+..++++.=.. -.++.-.++|.++.+||+++.. +++.|..   ++++-.||||+..
T Consensus       870 --------pf~~-~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  870 --------PFLA-DTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             --------CccC-CCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence                    8887 677666665543211 1223346689999999998876 7778874   5679999999964

>KOG0696|consensus

Probab=99.97  E-value=5.6e-31  Score=246.06  Aligned_cols=245  Identities=19%  Similarity=0.257  Sum_probs=199.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+|++|.++..+-+-+-+|+|+++.+   +.++.+--+.|-.+|.-. +-+.++++...|++-+++|+||||+.||+
T Consensus       357 lGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGD  436 (683)
T KOG0696|consen  357 LGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGD  436 (683)
T ss_pred             eccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCch
Confidence            69999999999977776666666665533   122333345566666654 67899999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.-.+++ +.+.+..+..++..|+.||.|||++||+.||+|.+||+++..|.++|+|||  ...    +.          
T Consensus       437 LMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFG--mcK----En----------  500 (683)
T KOG0696|consen  437 LMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFG--MCK----EN----------  500 (683)
T ss_pred             hhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecc--ccc----cc----------
Confidence            9988876 579999999999999999999999999999999999999999999999999  221    00          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                          .|.         
T Consensus       501 --------------------------------------------------------------------i~~---------  503 (683)
T KOG0696|consen  501 --------------------------------------------------------------------IFD---------  503 (683)
T ss_pred             --------------------------------------------------------------------ccC---------
Confidence                                                                                000         


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....++||||.|+|||++..++|+...|.|++|+++||||.|.-       
T Consensus       504 ----------------------------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQp-------  548 (683)
T KOG0696|consen  504 ----------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP-------  548 (683)
T ss_pred             ----------------------------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCC-------
Confidence                                        112567899999999999999999999999999999999999974       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~  379 (400)
                        ||.+ ++..+.+..|....   +.-|..+|.++.++....|.+.|.+|..+     +++-.||||..
T Consensus       549 --PFdG-eDE~elF~aI~ehn---vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  549 --PFDG-EDEDELFQAIMEHN---VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             --CCCC-CCHHHHHHHHHHcc---CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence              6666 66666666666542   23344588999999999999999999865     47999999985

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=1.2e-29  Score=241.88  Aligned_cols=242  Identities=15%  Similarity=0.212  Sum_probs=184.2

Q ss_pred             CCcceEEEEEecCC----CceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD----RRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~----~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+++.||++.+    ..+..+|++|....... .....+.+|+.+++.++|+||+++++++... ..++++||++++
T Consensus        15 lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g   93 (303)
T cd05110          15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHG   93 (303)
T ss_pred             cccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCC
Confidence            68899999988753    44456788888764432 2234688999999999999999999988654 567899999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........     
T Consensus        94 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg--~~~~~~~~~~~~-----  166 (303)
T cd05110          94 CLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFG--LARLLEGDEKEY-----  166 (303)
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccc--ccccccCccccc-----
Confidence            999998754  58899999999999999999999999999999999999999999999999  443111000000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (303)
T cd05110         167 --------------------------------------------------------------------------------  166 (303)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......++..|+|||++.+..+...+|.||+|+++||+++ |..    
T Consensus       167 --------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~----  210 (303)
T cd05110         167 --------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK----  210 (303)
T ss_pred             --------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCC----
Confidence                                            0111235678999999988877788999999999999987 654    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. .........+..+...  +.+...+..+.+++.+||..+|++||+++++++.
T Consensus       211 -----p~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         211 -----PYDG-IPTREIPDLLEKGERL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             -----CCCC-CCHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 6655 3333333333333222  2233467789999999999999999999998774

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1187|consensus

Probab=99.97  E-value=1.1e-29  Score=246.36  Aligned_cols=133  Identities=28%  Similarity=0.395  Sum_probs=115.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-EEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-ELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~   79 (400)
                      +|+|+|+.||++.-... ..||+|.+........++|.+|+.++.+++|+|+|+++++|.+.+ +.++|+||+++|+|.+
T Consensus        83 ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d  161 (361)
T KOG1187|consen   83 IGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLED  161 (361)
T ss_pred             eecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHH
Confidence            57888888887644433 568888776554320445999999999999999999999999888 5999999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCCCceEecCCCceEEeccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSN---QVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .+...   .++|.....|+.+++.||.|||..   .|+|||||++||++|.+.+.||+|||
T Consensus       162 ~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFG  222 (361)
T KOG1187|consen  162 HLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFG  222 (361)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCcc
Confidence            88643   789999999999999999999985   59999999999999999999999999

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=7.4e-30  Score=261.91  Aligned_cols=268  Identities=19%  Similarity=0.192  Sum_probs=171.5

Q ss_pred             CCcceEEEEEecCCCce----eEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccccccee------EeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRF----FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSY------LVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~----~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~------~~~~~~~lv~e   70 (400)
                      ||+|+|+.||++.....    ..+||+|.+....  ..+.+.+|  .++...+.++..+...+      ..+...++++|
T Consensus       140 LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~e  215 (566)
T PLN03225        140 LGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWR  215 (566)
T ss_pred             EeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEE
Confidence            68999999999988777    7889999865322  22222222  12222233333333221      34567999999


Q ss_pred             ccCCCChHHHHhhcCC---------------------CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCce
Q psy9736          71 YLPGGSLTDVVTETCM---------------------DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSV  128 (400)
Q Consensus        71 ~~~~~~L~~~i~~~~l---------------------~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~  128 (400)
                      |+.+++|.+++....+                     ....+..++.|++.||.|||+++|+||||||+||+++. ++.+
T Consensus       216 y~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~  295 (566)
T PLN03225        216 YEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSF  295 (566)
T ss_pred             ecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcE
Confidence            9999999998864321                     13346789999999999999999999999999999986 5899


Q ss_pred             EEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccc
Q psy9736         129 KLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL  208 (400)
Q Consensus       129 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (400)
                      +|+|||  ++..+....+      .......++..|+|||.+.+....                                
T Consensus       296 KL~DFG--lA~~l~~~~~------~~~~~~~~t~~Y~APE~~~~~~~~--------------------------------  335 (566)
T PLN03225        296 KIIDLG--AAADLRVGIN------YIPKEFLLDPRYAAPEQYIMSTQT--------------------------------  335 (566)
T ss_pred             EEEeCC--Cccccccccc------cCCcccccCCCccChHHhhccCCC--------------------------------
Confidence            999999  5543221111      112345667789999865442200                                


Q ss_pred             ceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC
Q psy9736         209 WNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN  288 (400)
Q Consensus       209 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  288 (400)
                                                                               +.....++..+++|+.+.. .+.
T Consensus       336 ---------------------------------------------------------~~~~~~~~~~~~sp~l~~~-~~~  357 (566)
T PLN03225        336 ---------------------------------------------------------PSAPSAPVATALSPVLWQL-NLP  357 (566)
T ss_pred             ---------------------------------------------------------CCCccccccccccchhccc-cCC
Confidence                                                                     0111122334566766543 344


Q ss_pred             cccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-------------------hhhhcHH
Q psy9736         289 QTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-------------------KEKLSQI  349 (400)
Q Consensus       289 ~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~s~~  349 (400)
                      ...|+||+||++|||+++..         |+.   +....+..++.........                   .......
T Consensus       358 ~k~DVwSlGviL~el~~~~~---------~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  425 (566)
T PLN03225        358 DRFDIYSAGLIFLQMAFPNL---------RSD---SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGA  425 (566)
T ss_pred             CCcccHHHHHHHHHHHhCcC---------CCc---hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchH
Confidence            67799999999999998743         221   1122222221111000000                   0001224


Q ss_pred             HHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         350 FQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       350 ~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      .+|||.+||++||++|||++++|+||||+....
T Consensus       426 ~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        426 GWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            569999999999999999999999999997444

>KOG0194|consensus

Probab=99.96  E-value=2.2e-29  Score=246.98  Aligned_cols=240  Identities=22%  Similarity=0.305  Sum_probs=192.4

Q ss_pred             CCcceEEEEEecCCCc----eeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR----FFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~----~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||.|.|+.|++++=..    ....||+|......   ....+.+.+|..++++++|+|||++||+...+..+++|||+|.
T Consensus       165 LGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~  244 (474)
T KOG0194|consen  165 LGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCN  244 (474)
T ss_pred             eecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecC
Confidence            6999999999884333    23338999887532   4456889999999999999999999999999999999999999


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ||+|.++++..  .++..+...++.+.+.||+|||+++++||||-..|++++.++.+||+|||  ++.    .-...   
T Consensus       245 gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFG--Ls~----~~~~~---  315 (474)
T KOG0194|consen  245 GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFG--LSR----AGSQY---  315 (474)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccc--ccc----CCcce---
Confidence            99999999865  49999999999999999999999999999999999999999999999999  332    11000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                         ...                          
T Consensus       316 ---------------------------------------------------~~~--------------------------  318 (474)
T KOG0194|consen  316 ---------------------------------------------------VMK--------------------------  318 (474)
T ss_pred             ---------------------------------------------------eec--------------------------
Confidence                                                               000                          


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWS  310 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws  310 (400)
                                                         ...-.-...|+|||.+...-++..+|+|++|++++|+.+ |.-  
T Consensus       319 -----------------------------------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~--  361 (474)
T KOG0194|consen  319 -----------------------------------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAE--  361 (474)
T ss_pred             -----------------------------------cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCC--
Confidence                                               000012357999999999877788999999988888887 443  


Q ss_pred             cccccccCcchhhcHHHHHHHHHh-CCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIAT-NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                             ||.+ ....+....|.. +.+...+  ..-+..+..++.+||..||++|||+.++.+
T Consensus       362 -------Py~g-~~~~~v~~kI~~~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  362 -------PYPG-MKNYEVKAKIVKNGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             -------CCCC-CCHHHHHHHHHhcCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence                   8888 777788888844 4433332  235668899999999999999999999854

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=2.2e-29  Score=235.47  Aligned_cols=241  Identities=19%  Similarity=0.329  Sum_probs=188.5

Q ss_pred             CCcceEEEEEecCCCc-eeEEEEecccccc----------CcchHHHHHHHHHHHHh-CCCCCcccccceeEeCCEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRR-FFSKILSNPITLA----------QQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-~~~~va~K~~~~~----------~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~~~~~~lv   68 (400)
                      +|+|.++.+|.+.+.. ....+++|.+...          ......++.+|+.++.+ ++|+||+++++++..++..+++
T Consensus         8 ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   87 (269)
T cd08528           8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIV   87 (269)
T ss_pred             hcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEE
Confidence            6889999999888766 4567777766432          12233557788888875 7999999999999999999999


Q ss_pred             EeccCCCChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          69 MEYLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        69 ~e~~~~~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      +||+++++|.+++..     ..+++..++.++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||  .+....
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg--~~~~~~  165 (269)
T cd08528          88 MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG--LAKQKQ  165 (269)
T ss_pred             EecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc--ceeecc
Confidence            999999999988742     358999999999999999999996 689999999999999999999999999  333110


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ...                                                                             
T Consensus       166 ~~~-----------------------------------------------------------------------------  168 (269)
T cd08528         166 PES-----------------------------------------------------------------------------  168 (269)
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~  302 (400)
                                                                 ......|+..|+|||++.+...+..+|.|++|+++|+
T Consensus       169 -------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~  205 (269)
T cd08528         169 -------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ  205 (269)
T ss_pred             -------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence                                                       0122357788999999988777788999999999999


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +++|..         ||.. .+.......+..+...... ...++..+.+||++||+.||++||++.|+..+
T Consensus       206 l~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         206 MCTLQP---------PFYS-TNMLSLATKIVEAVYEPLP-EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHhCCC---------cccc-cCHHHHHHHHhhccCCcCC-cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            999975         7755 4444444455444333222 22477899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=6e-29  Score=227.05  Aligned_cols=241  Identities=30%  Similarity=0.421  Sum_probs=188.0

Q ss_pred             EEEEEecCCCceeEEEEeccccccCcch-HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc
Q psy9736           6 TIDRFSSDDRRFFSKILSNPITLAQQPK-KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET   84 (400)
Q Consensus         6 ~~~v~~~~~~~~~~~va~K~~~~~~~~~-~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~   84 (400)
                      ++.+|.+........+++|......... .+.+.+|+..+++++|+|++++++.+..+...++++||+++++|.+++...
T Consensus         2 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   81 (244)
T smart00220        2 FGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR   81 (244)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc
Confidence            3445555554455667777776554333 678899999999999999999999999989999999999888999998765


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccce
Q psy9736          85 C-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTV  163 (400)
Q Consensus        85 ~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (400)
                      . ++...+..++.+++.++.+||+.+++|+||+|.||+++.++.++++|||  .+.......                  
T Consensus        82 ~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~--~~~~~~~~~------------------  141 (244)
T smart00220       82 GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFG--LARQLDPGG------------------  141 (244)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEcccc--ceeeecccc------------------
Confidence            3 8999999999999999999999999999999999999999999999999  332111000                  


Q ss_pred             eeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccccccc
Q psy9736         164 YTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTST  243 (400)
Q Consensus       164 y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  243 (400)
                                                                                                      
T Consensus       142 --------------------------------------------------------------------------------  141 (244)
T smart00220      142 --------------------------------------------------------------------------------  141 (244)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhh
Q psy9736         244 SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFIL  323 (400)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~  323 (400)
                                            ......++..|+|||.+........+|.|++|+++|++++|..         ||....
T Consensus       142 ----------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~---------p~~~~~  190 (244)
T smart00220      142 ----------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKP---------PFPGDD  190 (244)
T ss_pred             ----------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCC---------CCCCCC
Confidence                                  0122356778999999887777789999999999999999975         776533


Q ss_pred             cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       324 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      +.......+.............++..+.+++++||..+|++||++.++++||||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      191 QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            333333333333332222222267789999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4250|consensus

Probab=99.96  E-value=1.2e-29  Score=251.69  Aligned_cols=235  Identities=23%  Similarity=0.312  Sum_probs=190.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~   73 (400)
                      ||.|+|+-|+..++++++..||+|..+... ....+++.+|+++|++++|+|||+++++=.+..      ...++||||.
T Consensus        21 LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~  100 (732)
T KOG4250|consen   21 LGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCS  100 (732)
T ss_pred             hcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecC
Confidence            699999999999999999999999987543 346788999999999999999999998765433      5789999999


Q ss_pred             CCChHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC--C--ceEEeccchhhhhhhcccc
Q psy9736          74 GGSLTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD--G--SVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        74 ~~~L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~--~--~~~l~dfg~~~~~~~~~~~  145 (400)
                      ||+|...+++.    ++++..++.++..++.|+.|||++||+||||||.||++...  |  ..||+|||  .|+.+.+..
T Consensus       101 gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG--~Arel~d~s  178 (732)
T KOG4250|consen  101 GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG--AARELDDNS  178 (732)
T ss_pred             CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccc--ccccCCCCC
Confidence            99999999743    69999999999999999999999999999999999998543  3  47999999  666332222


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (732)
T KOG4250|consen  179 --------------------------------------------------------------------------------  178 (732)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                              .-+++.||+.|.+||+.-+ ..|+...|-||+|+.+|+..
T Consensus       179 ----------------------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  179 ----------------------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             ----------------------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence                                                    2456689999999999996 66667889999999999999


Q ss_pred             CCCCcccccccccCcchhhcH---HHHHHHHHhCCCCCcc------------------hhhhhcH----HHHHHHHHhhh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSC---RQALYLIATNKKPEIK------------------EKEKLSQ----IFQDFLDQCLE  359 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~---~~~~~~i~~~~~~~~~------------------~~~~~s~----~~~dli~~~L~  359 (400)
                      ||..         ||.....+   .+..++++..++..+.                  .+..+++    .+..++..+|+
T Consensus       219 TG~l---------PF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~  289 (732)
T KOG4250|consen  219 TGEL---------PFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLE  289 (732)
T ss_pred             ccCC---------CCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHh
Confidence            9987         98776555   4477777666442211                  1112222    45678999999


Q ss_pred             hhhhhhh
Q psy9736         360 EEVETRA  366 (400)
Q Consensus       360 ~dP~~R~  366 (400)
                      -+|.+|.
T Consensus       290 ~~~~~~~  296 (732)
T KOG4250|consen  290 WNPRKRG  296 (732)
T ss_pred             hhHHHhC
Confidence            9999999

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.96  E-value=7.9e-29  Score=232.06  Aligned_cols=243  Identities=15%  Similarity=0.218  Sum_probs=182.8

Q ss_pred             CCcceEEEEEecC---CCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEE
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~   69 (400)
                      +|+|+++.|+.+.   +.....+|++|.+....  ....+++.+|+.++++++|+||+++++++....      ..++++
T Consensus         7 ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   86 (273)
T cd05074           7 LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVIL   86 (273)
T ss_pred             ccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEE
Confidence            5778888777775   44456788888775432  234567889999999999999999999876432      347889


Q ss_pred             eccCCCChHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          70 EYLPGGSLTDVVTE-------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        70 e~~~~~~L~~~i~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      +|+.+++|.+++..       ..++...++.++.|++.|+.|||+.+++|+||||+||+++.++.++++|||  .+....
T Consensus        87 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg--~~~~~~  164 (273)
T cd05074          87 PFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG--LSKKIY  164 (273)
T ss_pred             ecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccc--cccccc
Confidence            99999999877632       147888999999999999999999999999999999999999999999999  443211


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ......                                                                          
T Consensus       165 ~~~~~~--------------------------------------------------------------------------  170 (273)
T cd05074         165 SGDYYR--------------------------------------------------------------------------  170 (273)
T ss_pred             CCccee--------------------------------------------------------------------------
Confidence            100000                                                                          


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~  302 (400)
                                                                 ......+++.|++||.+....+...+|.||+|+++||
T Consensus       171 -------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~e  207 (273)
T cd05074         171 -------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWE  207 (273)
T ss_pred             -------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHH
Confidence                                                       0111234567899999888777788999999999999


Q ss_pred             hcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         303 FLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       303 ~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |++ |..         ||.. .+..+....+........  +...+..+.+++.+||..+|++|||+.+++++
T Consensus       208 l~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         208 IMTRGQT---------PYAG-VENSEIYNYLIKGNRLKQ--PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HhhCCCC---------CCCC-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            998 554         6654 445555555555433222  23467789999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1167|consensus

Probab=99.96  E-value=3.7e-29  Score=235.22  Aligned_cols=289  Identities=21%  Similarity=0.293  Sum_probs=202.2

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|+|..|+++.+..   ...+||+|.+...+..  .++.+|+++|..+ .+.||+++.+.+.+++++++|+||++...
T Consensus        44 igeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~  121 (418)
T KOG1167|consen   44 IGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDR  121 (418)
T ss_pred             ccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccC
Confidence            6899999999998888   7789999999877654  4489999999998 68999999999999999999999999988


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ..++...  ++...++.+++.++.||.++|..|||||||||.|++++.. +.-.|.|||  ++..........       
T Consensus       122 f~~l~~~--l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFg--LA~~~d~~~~~~-------  190 (418)
T KOG1167|consen  122 FRDLYRS--LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFG--LAQRYDGYQQTE-------  190 (418)
T ss_pred             HHHHHhc--CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEech--hHHHHHhhhhhh-------
Confidence            8888776  5678899999999999999999999999999999999876 778999999  555311111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                          .+..|..|   ...++                            .+.+              ...+..        
T Consensus       191 ----~s~~~~~~---~~~~~----------------------------~g~~--------------~~~~~~--------  213 (418)
T KOG1167|consen  191 ----HSRSYSGR---HATPA----------------------------MGKD--------------VHCQSV--------  213 (418)
T ss_pred             ----hhhhhhcc---cCCcc----------------------------ccCc--------------cccccc--------
Confidence                00111111   00000                            0000              000000        


Q ss_pred             ccccccccCCCCCCCCCCCCCCCC-CCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQP-PPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                            .+      ..++.|.... -......+..+.||++|+|||++.+++.. ...|+||.|++++.++++..     
T Consensus       214 ------~~------~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~-----  276 (418)
T KOG1167|consen  214 ------AT------ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRY-----  276 (418)
T ss_pred             ------cc------ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcccc-----
Confidence                  00      0111111110 11122346677999999999999998765 56788888888888888766     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--------------C-------------------------------CC--Ccchh-hh
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--------------K-------------------------------KP--EIKEK-EK  345 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--------------~-------------------------------~~--~~~~~-~~  345 (400)
                          ||+...+....+.+|..-              .                               .+  ....+ +-
T Consensus       277 ----PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~  352 (418)
T KOG1167|consen  277 ----PFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDV  352 (418)
T ss_pred             ----ccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccccc
Confidence                777755554444444211              0                               00  00001 11


Q ss_pred             hcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         346 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       346 ~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ++..+.||+++||+.||.+|+|++++|.||||...
T Consensus       353 ~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  353 FPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             ccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence            33478999999999999999999999999999963

>KOG2052|consensus

Probab=99.96  E-value=1e-29  Score=239.99  Aligned_cols=247  Identities=16%  Similarity=0.259  Sum_probs=181.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh--CCCCCcccccceeEeCC----EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVGE----ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~   74 (400)
                      +|+|-|+.||++..  -+..||+|.+...+   .+.+.+|.+|.++  |+|+||+.|+++-..+.    +.|||++|.+.
T Consensus       219 IGkGRyGEVwrG~w--rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~  293 (513)
T KOG2052|consen  219 IGKGRFGEVWRGRW--RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEH  293 (513)
T ss_pred             ecCccccceeeccc--cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccC
Confidence            69999999998876  45789999986554   4668899999988  49999999998766543    78999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN--------QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |+|+|++.+..++.+....++..++.||.|||-.        .|.|||||..||++.++|.+.|+|+|  +|-....+.+
T Consensus       294 GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG--LAv~h~~~t~  371 (513)
T KOG2052|consen  294 GSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG--LAVRHDSDTD  371 (513)
T ss_pred             CcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece--eeEEecccCC
Confidence            9999999999999999999999999999999942        78899999999999999999999999  4331111111


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .-                                                                              
T Consensus       372 ~i------------------------------------------------------------------------------  373 (513)
T KOG2052|consen  372 TI------------------------------------------------------------------------------  373 (513)
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc------ccCCCCccchh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ------TTPPTGLTGSI  300 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~------~~d~~s~g~~~  300 (400)
                                                           ..+.++.+||..|||||++.+.-+..      ..|+|++|.|+
T Consensus       374 -------------------------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl  416 (513)
T KOG2052|consen  374 -------------------------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL  416 (513)
T ss_pred             -------------------------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence                                                 01356779999999999999753332      33455555555


Q ss_pred             hhhcCCCCccccccc---ccCcchh---hcHHHHHHHHHhC--CCCCcchhhhhcH---HHHHHHHHhhhhhhhhhhcHH
Q psy9736         301 LEFLGPHKWSFQPHF---LIPYLFI---LSCRQALYLIATN--KKPEIKEKEKLSQ---IFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       301 ~~~~~gd~ws~g~~~---~~P~~~~---~~~~~~~~~i~~~--~~~~~~~~~~~s~---~~~dli~~~L~~dP~~R~s~~  369 (400)
                      .|+..-=. + |-+.   ..||++.   +...+.+..+..-  ..|.+++...-.+   .+.++|+.||..||+-|.||=
T Consensus       417 WEiarRc~-~-ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL  494 (513)
T KOG2052|consen  417 WEIARRCE-S-GGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL  494 (513)
T ss_pred             HHHHHHhh-c-CCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence            44432100 0 1111   7888773   3346666666443  3455544322222   466899999999999999985


Q ss_pred             HH
Q psy9736         370 LL  371 (400)
Q Consensus       370 ~~  371 (400)
                      -+
T Consensus       495 ri  496 (513)
T KOG2052|consen  495 RI  496 (513)
T ss_pred             HH
Confidence            44

>KOG1095|consensus

Probab=99.96  E-value=3.7e-29  Score=261.67  Aligned_cols=243  Identities=18%  Similarity=0.272  Sum_probs=201.3

Q ss_pred             CCcceEEEEEecCCCce-----eEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRF-----FSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-----~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|.|+.||.+.-...     ..+||+|.+.... ......|.+|..+|+++.|+|||++++++...+..++++|||++
T Consensus       700 lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~g  779 (1025)
T KOG1095|consen  700 LGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEG  779 (1025)
T ss_pred             eccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhccc
Confidence            69999999988743333     4569999987553 34568899999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          75 GSLTDVVTET--------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        75 ~~L~~~i~~~--------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |+|..++++.        .++..+...++.+|+.|+.||+++++|||||...|+|++....+||+|||  +++.++....
T Consensus       780 GDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFG--lArDiy~~~y  857 (1025)
T KOG1095|consen  780 GDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFG--LARDIYDKDY  857 (1025)
T ss_pred             CcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccc--hhHhhhhchh
Confidence            9999999853        48899999999999999999999999999999999999999999999999  6663322221


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .+                                                       ..                     
T Consensus       858 yr-------------------------------------------------------~~---------------------  861 (1025)
T KOG1095|consen  858 YR-------------------------------------------------------KH---------------------  861 (1025)
T ss_pred             ee-------------------------------------------------------cc---------------------
Confidence            11                                                       00                     


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                               ....-..-|||||.+.+-.++.++|+||+|++++|+++-
T Consensus       862 -----------------------------------------~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifsl  900 (1025)
T KOG1095|consen  862 -----------------------------------------GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSL  900 (1025)
T ss_pred             -----------------------------------------CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhC
Confidence                                                     001123479999999998888899999999999999887


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ..        .||.. .+..+.+.....+.  .++.|..++..+.++|.+||+.+|++||+...+++
T Consensus       901 G~--------~PY~~-~~n~~v~~~~~~gg--RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  901 GA--------TPYPS-RSNFEVLLDVLEGG--RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CC--------CCCCC-cchHHHHHHHHhCC--ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            54        26655 77788877777775  66667778999999999999999999999999987

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.4e-28  Score=247.29  Aligned_cols=272  Identities=18%  Similarity=0.195  Sum_probs=172.6

Q ss_pred             CCcceEEEEEecCC----------------CceeEEEEeccccccCcchHHHH--------------HHHHHHHHhCCCC
Q psy9736           1 MKRGVTIDRFSSDD----------------RRFFSKILSNPITLAQQPKKELI--------------INEILVMRENKHP   50 (400)
Q Consensus         1 ~g~G~~~~v~~~~~----------------~~~~~~va~K~~~~~~~~~~~~~--------------~~Ei~~l~~l~h~   50 (400)
                      ||+|+|+.||++..                ......||+|.+....+...+.|              ..|+.++.+++|.
T Consensus       153 LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~  232 (507)
T PLN03224        153 LGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRN  232 (507)
T ss_pred             eecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcc
Confidence            69999999998742                22345699999876544333333              3466777777666


Q ss_pred             Cc-----ccccceeEe--------CCEEEEEEeccCCCChHHHHhhc-------------------------CCCHHHHH
Q psy9736          51 NI-----VNYLDSYLV--------GEELWVVMEYLPGGSLTDVVTET-------------------------CMDEGQIA   92 (400)
Q Consensus        51 ni-----v~~~~~~~~--------~~~~~lv~e~~~~~~L~~~i~~~-------------------------~l~~~~~~   92 (400)
                      ++     ++++++|..        .+..|+|+||+++++|.+++...                         .+++..++
T Consensus       233 ~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~  312 (507)
T PLN03224        233 PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIK  312 (507)
T ss_pred             cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHH
Confidence            54     566666543        35689999999999998877531                         13456788


Q ss_pred             HHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccC
Q psy9736          93 AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTG  172 (400)
Q Consensus        93 ~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~  172 (400)
                      .++.|++.+|.|+|+.+++||||||+||+++.++.++|+|||  ++.........      ....-..+..|++||.+..
T Consensus       313 ~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFG--la~~~~~~~~~------~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        313 GVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFG--AAVDMCTGINF------NPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCc--CccccccCCcc------CccccCCCcceeChhhhcC
Confidence            899999999999999999999999999999999999999999  44322111100      0011122456777766544


Q ss_pred             CCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCC
Q psy9736         173 MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTP  252 (400)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (400)
                      .....                           ..+.                                            
T Consensus       385 ~~~~~---------------------------~~~~--------------------------------------------  393 (507)
T PLN03224        385 PQSCP---------------------------RAPA--------------------------------------------  393 (507)
T ss_pred             CCCCC---------------------------ccch--------------------------------------------
Confidence            22000                           0000                                            


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhh---------
Q psy9736         253 PLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFIL---------  323 (400)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~---------  323 (400)
                                        .......+|...... .....|+||+|+++|+|++|..        .|+....         
T Consensus       394 ------------------~~~~~~l~~~~~~yg-~~~~~DvwSlGvil~em~~~~l--------~p~~~~~~f~~~~~~~  446 (507)
T PLN03224        394 ------------------PAMAALLSPFAWLYG-RPDLFDSYTAGVLLMQMCVPEL--------RPVANIRLFNTELRQY  446 (507)
T ss_pred             ------------------hhhhhhhhhhHHhcC-CCCccchhhHHHHHHHHHhCCC--------CCccchhhhhhHHhhc
Confidence                              000011112211111 1134699999999999998864        1332100         


Q ss_pred             cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhh---hhhhcHHHHhcCcccc
Q psy9736         324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEV---ETRASASLLLKHPFLK  378 (400)
Q Consensus       324 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP---~~R~s~~~~l~hp~~~  378 (400)
                      ......++..+.....+......++.++||+.+||..+|   .+|+|++|+|+||||.
T Consensus       447 ~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        447 DNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             cchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence            011111222233333444455578899999999999876   6899999999999996

>KOG1027|consensus

Probab=99.96  E-value=2.3e-29  Score=252.93  Aligned_cols=232  Identities=22%  Similarity=0.245  Sum_probs=179.8

Q ss_pred             ceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc--C--C-CHH
Q psy9736          16 RFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--C--M-DEG   89 (400)
Q Consensus        16 ~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~--~--l-~~~   89 (400)
                      .....||+|.+-..   .-..+++||.+|+.- .|+||+++|+.-.++++.|+..|+| ..+|.+++...  .  . ...
T Consensus       531 ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i  606 (903)
T KOG1027|consen  531 YEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDI  606 (903)
T ss_pred             eCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHHHHHhccccchhhcccc
Confidence            33457888877433   224468999999997 7999999999999999999999999 66999999862  1  1 114


Q ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---C--CceEEeccchhhhhhhccccchhhcccccccccccccee
Q psy9736          90 QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---D--GSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVY  164 (400)
Q Consensus        90 ~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y  164 (400)
                      ....++.|+..||.|||+.+|||||+||.||+|+.   +  .+.+|+|||  +..++..+.+.-                
T Consensus       607 ~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg--lsKkl~~~~sS~----------------  668 (903)
T KOG1027|consen  607 DPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFG--LSKKLAGGKSSF----------------  668 (903)
T ss_pred             cHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccc--cccccCCCcchh----------------
Confidence            56888999999999999999999999999999987   3  467899999  544343333221                


Q ss_pred             eehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccC
Q psy9736         165 TAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTS  244 (400)
Q Consensus       165 ~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  244 (400)
                                                                                                      
T Consensus       669 --------------------------------------------------------------------------------  668 (903)
T KOG1027|consen  669 --------------------------------------------------------------------------------  668 (903)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhc
Q psy9736         245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILS  324 (400)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~  324 (400)
                                          ..+....||-+|+|||++...+.....|++++||++|+.++|..        .||.+   
T Consensus       669 --------------------~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~--------HpFGd---  717 (903)
T KOG1027|consen  669 --------------------SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGS--------HPFGD---  717 (903)
T ss_pred             --------------------hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCc--------cCCCc---
Confidence                                11445679999999999999988889999999999999999853        26655   


Q ss_pred             HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         325 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       325 ~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ..+....|+++...-..-...-...+.|||.+|+.+||..||+|.++|.||+|+.-
T Consensus       718 ~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  718 SLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             hHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            46666777777442221111111178999999999999999999999999999863

>KOG0665|consensus

Probab=99.96  E-value=1.8e-29  Score=229.59  Aligned_cols=252  Identities=19%  Similarity=0.234  Sum_probs=183.1

Q ss_pred             CcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEeccC
Q psy9736           2 KRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYLP   73 (400)
Q Consensus         2 g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~   73 (400)
                      |.|.- .|..+-|......|++|++...  .....++..+|..++..+.|+||++++.+|.-..      .+|+||||+ 
T Consensus        26 ~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m-  103 (369)
T KOG0665|consen   26 GSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM-  103 (369)
T ss_pred             CCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh-
Confidence            44544 4566777777788888887644  2344677899999999999999999999987442      689999999 


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ..+|.+.+. ..++-.++..++.|++.|+.|||+.||+|||+||+||++..++..||.|||  .+..-..+.        
T Consensus       104 ~~nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg--~ar~e~~~~--------  172 (369)
T KOG0665|consen  104 DANLCQVIL-MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFG--LARTEDTDF--------  172 (369)
T ss_pred             hhHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccch--hhcccCccc--------
Confidence            558988877 347788999999999999999999999999999999999999999999999  544211110        


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (369)
T KOG0665|consen  173 --------------------------------------------------------------------------------  172 (369)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                      .-+..+.|..|+|||++++-.+....|+||+||++-||+.|.++=-|-
T Consensus       173 --------------------------------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~  220 (369)
T KOG0665|consen  173 --------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK  220 (369)
T ss_pred             --------------------------------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence                                            012336788999999999998889999999999999999998742222


Q ss_pred             cc--------------ccCcchhhcHHHHHHHH----------HhCCC-----CCcchhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         314 HF--------------LIPYLFILSCRQALYLI----------ATNKK-----PEIKEKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       314 ~~--------------~~P~~~~~~~~~~~~~i----------~~~~~-----~~~~~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                      .-              ..-|...+.+....+-.          .+.-+     ........-+..++||+.+||..||++
T Consensus       221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~  300 (369)
T KOG0665|consen  221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEK  300 (369)
T ss_pred             hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhh
Confidence            11              11111111111111100          00000     000000011225889999999999999


Q ss_pred             hhcHHHHhcCcccc
Q psy9736         365 RASASLLLKHPFLK  378 (400)
Q Consensus       365 R~s~~~~l~hp~~~  378 (400)
                      |.|++++|+|||++
T Consensus       301 Risv~daL~HPY~~  314 (369)
T KOG0665|consen  301 RISVDDALRHPYIK  314 (369)
T ss_pred             cccHHHHhcCCeee
Confidence            99999999999997

>KOG0196|consensus

Probab=99.96  E-value=2.9e-29  Score=250.28  Aligned_cols=241  Identities=15%  Similarity=0.252  Sum_probs=204.9

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|.|+.|++++=+   +--..||||-++... ++.+..|+.|+.||.+++||||+++.++......+++++|||++|+
T Consensus       637 IGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGs  716 (996)
T KOG0196|consen  637 IGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGS  716 (996)
T ss_pred             EecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCc
Confidence            688999999877432   333679999988664 4567789999999999999999999999999999999999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |..+++.+  .|+..+...+++.|..|+.||-+.++|||||-..|||++.+-.+|++|||  +.+.+.++....      
T Consensus       717 LDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFG--LSRvledd~~~~------  788 (996)
T KOG0196|consen  717 LDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFG--LSRVLEDDPEAA------  788 (996)
T ss_pred             HHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEecccc--ceeecccCCCcc------
Confidence            99999854  78888999999999999999999999999999999999999999999999  666444444211      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       789 --------------------------------------------------------------------------------  788 (996)
T KOG0196|consen  789 --------------------------------------------------------------------------------  788 (996)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCC--CCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNG--ALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSF  311 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~  311 (400)
                                                      .++.-|  ...|.|||+|.--+.+..+|.||+|++|.|.++ |+-   
T Consensus       789 --------------------------------ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGER---  833 (996)
T KOG0196|consen  789 --------------------------------YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER---  833 (996)
T ss_pred             --------------------------------ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCC---
Confidence                                            112222  357999999999888899999999999988775 454   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                            ||.+ ++..+.+..|-.+.  .++.|.+.+..+.+|+..||++|.++||..+++.+
T Consensus       834 ------PYWd-mSNQdVIkaIe~gy--RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  834 ------PYWD-MSNQDVIKAIEQGY--RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ------cccc-cchHHHHHHHHhcc--CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence                  8888 88888888888874  56778889999999999999999999999999876

>KOG0695|consensus

Probab=99.96  E-value=4.8e-29  Score=227.81  Aligned_cols=247  Identities=20%  Similarity=0.294  Sum_probs=198.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|.+|..++-..+..-+|+|+++..   ...+..=.+.|-.+..+. +||.+|.+...|++..++++|.||..||+
T Consensus       258 igrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggd  337 (593)
T KOG0695|consen  258 IGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGD  337 (593)
T ss_pred             ecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcc
Confidence            69999998877755555444444444322   222333356777777765 79999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.-..++ +.++++.++.+...|+.||.|||++||+.||+|.+|+++|..|.+|++|+|  .-.    +....       
T Consensus       338 lmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdyg--mck----e~l~~-------  404 (593)
T KOG0695|consen  338 LMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYG--MCK----EGLGP-------  404 (593)
T ss_pred             eeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccc--hhh----cCCCC-------
Confidence            9766654 479999999999999999999999999999999999999999999999999  111    11000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       405 --------------------------------------------------------------------------------  404 (593)
T KOG0695|consen  405 --------------------------------------------------------------------------------  404 (593)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....++||||.|+|||++.+..|+...|.|++|++||||+.|.-       
T Consensus       405 ----------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrs-------  449 (593)
T KOG0695|consen  405 ----------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS-------  449 (593)
T ss_pred             ----------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCC-------
Confidence                                        112567899999999999999999999999999999999999986       


Q ss_pred             ccCcch------hhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc------HHHHhcCccccc
Q psy9736         316 LIPYLF------ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS------ASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~------~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s------~~~~l~hp~~~~  379 (400)
                        ||..      +++..+.+++++-...-.+  |..+|-.+..++.+-|.+||.+|..      .+++-.||||..
T Consensus       450 --pfdivgm~n~d~ntedylfqvilekqiri--prslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  450 --PFDIVGMDNPDMNTEDYLFQVILEKQIRI--PRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             --CcceecCCCcccchhHHHHHHHhhhcccc--cceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence              7743      3567888888876654344  4457778889999999999999975      568999999984

>KOG0668|consensus

Probab=99.95  E-value=1.1e-28  Score=214.92  Aligned_cols=132  Identities=23%  Similarity=0.398  Sum_probs=114.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeC--CEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVG--EELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~~~~~~L   77 (400)
                      +|+|-++.||-+.+-....|+++|.++.-   ..+.+.+|+.||+.|. |+||++++++..+.  ...-+++||..+.+.
T Consensus        46 ~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Df  122 (338)
T KOG0668|consen   46 VGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDF  122 (338)
T ss_pred             HcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccH
Confidence            59999999999999899999999998643   4577899999999995 99999999998754  467899999988777


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhh
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIAT  139 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~  139 (400)
                      ..+...  ++.-.++.++.+++.||.|||+.||.|||+||.|+++|.. -.++|+|+|  +|.
T Consensus       123 k~ly~t--l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWG--LAE  181 (338)
T KOG0668|consen  123 KQLYPT--LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWG--LAE  181 (338)
T ss_pred             HHHhhh--hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecc--hHh
Confidence            665543  7788899999999999999999999999999999999876 568999999  554

>KOG1151|consensus

Probab=99.95  E-value=3.9e-28  Score=228.77  Aligned_cols=256  Identities=20%  Similarity=0.257  Sum_probs=194.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-------HHHHHHHHHHHHhCCCCCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-------KELIINEILVMRENKHPNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-------~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||+|+|..||++=|......||+|.-.......       .+...+|..|-+.|.|+-||++|++|.-+ +.+|-|+|||
T Consensus       471 LGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYc  550 (775)
T KOG1151|consen  471 LGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYC  550 (775)
T ss_pred             hccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeec
Confidence            699999999999998888888988765543221       23367899999999999999999999755 5789999999


Q ss_pred             CCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC--CeecCCCCCCceEecC---CCceEEeccchhhhhhhccccc
Q psy9736          73 PGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        73 ~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~--~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +|.+|.-+++.+ .+++..++.|+.||+.||.||.+.  .|||-|+||.||++-.   .|.++|+|||  +.....++..
T Consensus       551 eGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG--LSKIMdddSy  628 (775)
T KOG1151|consen  551 EGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG--LSKIMDDDSY  628 (775)
T ss_pred             CCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc--hhhhccCCcc
Confidence            999999888865 689999999999999999999976  9999999999999954   4889999999  6653322221


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ....+                                                                           
T Consensus       629 ~~vdG---------------------------------------------------------------------------  633 (775)
T KOG1151|consen  629 NSVDG---------------------------------------------------------------------------  633 (775)
T ss_pred             Ccccc---------------------------------------------------------------------------
Confidence            11000                                                                           


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC----CCCcccCCCCccchhhh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK----NKNQTTPPTGLTGSILE  302 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~d~~s~g~~~~~  302 (400)
                                                           +.-...+.||-+|+|||.+.-.    ...-+.|+||+|+|+|.
T Consensus       634 -------------------------------------meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ  676 (775)
T KOG1151|consen  634 -------------------------------------MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ  676 (775)
T ss_pred             -------------------------------------eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence                                                 0113345688888888876642    11235577777777777


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHH--HHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYL--IATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~--i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      .|.|.-         ||....+..+++..  |++-..-.++...-++..+++||++||.+--++|+.+.++..||||.-
T Consensus       677 ClYGrK---------PFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  677 CLYGRK---------PFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             hhccCC---------CCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            777766         88776555444433  333322333334457889999999999999999999999999999974

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=5.5e-28  Score=229.67  Aligned_cols=245  Identities=15%  Similarity=0.176  Sum_probs=173.1

Q ss_pred             CCcceEEEEEecCCCce---eEEEEeccccccCcch-HH----------HHHHHHHHHHhCCCCCcccccceeEeCC---
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLAQQPK-KE----------LIINEILVMRENKHPNIVNYLDSYLVGE---   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~~~~~-~~----------~~~~Ei~~l~~l~h~niv~~~~~~~~~~---   63 (400)
                      ||+|+|+.||++.....   ...+++|......... .+          ....+...+..+.|+|++++++.+....   
T Consensus        20 LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~   99 (294)
T PHA02882         20 IGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRM   99 (294)
T ss_pred             EecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCc
Confidence            68999999999875554   4556666544333211 11          1112233445568999999998765443   


Q ss_pred             -EEEEEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          64 -ELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        64 -~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                       ..+++++++ ..++.+.+... ..++..+..++.|++.|+.|||+.+++||||||+||+++.++.++|+|||  ++...
T Consensus       100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFG--la~~~  176 (294)
T PHA02882        100 YYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYG--IASHF  176 (294)
T ss_pred             eEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcC--Cceee
Confidence             457788887 44676666643 46888899999999999999999999999999999999999999999999  44422


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      .......                                                                         
T Consensus       177 ~~~~~~~-------------------------------------------------------------------------  183 (294)
T PHA02882        177 IIHGKHI-------------------------------------------------------------------------  183 (294)
T ss_pred             ccCCccc-------------------------------------------------------------------------
Confidence            1110000                                                                         


Q ss_pred             ccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhh
Q psy9736         222 EELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~  301 (400)
                                                             ..+........||+.|+|||+..+..++..+|.||+|+++|
T Consensus       184 ---------------------------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~  224 (294)
T PHA02882        184 ---------------------------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCML  224 (294)
T ss_pred             ---------------------------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence                                                   00001123346899999999999988889999999999999


Q ss_pred             hhcCCCCcccccccccCcchhhcHHH--------HHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFILSCRQ--------ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ||++|..         ||....+...        ...++.++. ..   ....+..+.++++.|++.+|++||+.+++++
T Consensus       225 el~~g~~---------P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        225 KWAGIKL---------PWKGFGHNGNLIHAAKCDFIKRLHEGK-IK---IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHhCCC---------CCCccccchHHHHHhHHHHHHHhhhhh-hc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            9999987         8876422221        122222221 11   1234678999999999999999999999875

>KOG1094|consensus

Probab=99.94  E-value=1.3e-27  Score=231.89  Aligned_cols=245  Identities=17%  Similarity=0.233  Sum_probs=189.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchH-HHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKK-ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~-~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|.|+.|+++.-.- +.+||+|..+....... ..|.+||.+|.+++||||+.++++|..++.+++++||+++|+|.+
T Consensus       546 iGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnq  624 (807)
T KOG1094|consen  546 IGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQ  624 (807)
T ss_pred             hcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHH
Confidence            6999999999997644 79999999987776554 789999999999999999999999999999999999999999999


Q ss_pred             HHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~~---l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++.++.   +......+++.||..|+.||.+.++||||+.+.|++++.++++||+|||  .++.++....-+        
T Consensus       625 Fl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfg--msR~lysg~yy~--------  694 (807)
T KOG1094|consen  625 FLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFG--MSRNLYSGDYYR--------  694 (807)
T ss_pred             HHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcc--cccccccCCcee--------
Confidence            998762   2344556799999999999999999999999999999999999999999  554332222111        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                    ..+                               
T Consensus       695 ----------------------------------------------vqg-------------------------------  697 (807)
T KOG1094|consen  695 ----------------------------------------------VQG-------------------------------  697 (807)
T ss_pred             ----------------------------------------------eec-------------------------------
Confidence                                                          000                               


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                      ..+-...|||+|.|..-+.+..+|.|++|..+||++.-=-       .
T Consensus       698 --------------------------------r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~-------e  738 (807)
T KOG1094|consen  698 --------------------------------RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR-------E  738 (807)
T ss_pred             --------------------------------ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh-------h
Confidence                                            0123468999999998877788888888887776643300       3


Q ss_pred             cCcchhhcHHHHHHH---HHhCCC--CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYL---IATNKK--PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~---i~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      .||.. ++..+....   ...++.  ..+..|.-++..+.+||-+||.+|-++|||.+++-.
T Consensus       739 ~Py~~-lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  739 QPYSQ-LTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             Cchhh-hhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            47766 444444333   233322  222334447778999999999999999999999844

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.94  E-value=7.4e-27  Score=255.93  Aligned_cols=233  Identities=17%  Similarity=0.220  Sum_probs=176.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      +|+|.|+.||++........||+|.+......    ...|+.++++++|+||+++++++..+...++||||+++++|.++
T Consensus       698 ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~  773 (968)
T PLN00113        698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEV  773 (968)
T ss_pred             EccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHH
Confidence            58999999999988777888999987543321    23568899999999999999999998899999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLH---SNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.  +++..+..++.|++.|+.|||   +.+++|||+||+||+++.++..++. ||  .+....               
T Consensus       774 l~~--l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~--~~~~~~---------------  833 (968)
T PLN00113        774 LRN--LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS--LPGLLC---------------  833 (968)
T ss_pred             Hhc--CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec--cccccc---------------
Confidence            964  788999999999999999999   5699999999999999988777664 54  111000               


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       834 --------------------------------------------------------------------------------  833 (968)
T PLN00113        834 --------------------------------------------------------------------------------  833 (968)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......||+.|+|||++....+..++|+||+|+++|||++|..         
T Consensus       834 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~---------  876 (968)
T PLN00113        834 ----------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKS---------  876 (968)
T ss_pred             ----------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCC---------
Confidence                                        0011256788999999998888889999999999999999976         


Q ss_pred             CcchhhcH----HHHHHHHHhC------CCCCc----chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSC----RQALYLIATN------KKPEI----KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~----~~~~~~i~~~------~~~~~----~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||......    .+........      ..+.+    ....+....+.+++.+||+.||++|||++|+++.
T Consensus       877 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        877 PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            66331110    1100000000      00111    1111233467899999999999999999999874

>KOG4257|consensus

Probab=99.94  E-value=4e-27  Score=229.85  Aligned_cols=240  Identities=18%  Similarity=0.273  Sum_probs=191.3

Q ss_pred             CCcceEEEEEecC--C--CceeEEEEecccccc-CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD--D--RRFFSKILSNPITLA-QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~--~~~~~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||.|-|+.|+.+.  +  +-.+..||+|.-+.+ .....+.|+.|..++++++|+||+++++++.. ...|+|||+++-|
T Consensus       397 iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~G  475 (974)
T KOG4257|consen  397 IGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLG  475 (974)
T ss_pred             hcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccch
Confidence            6888888887762  1  222345888887764 34457889999999999999999999999985 4689999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      .|..+++.+  .++..+...++.||+.||.|||+..+|||||-..||++.+..++|++|||  +.+.+.++.--.     
T Consensus       476 ELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFG--LSR~~ed~~yYk-----  548 (974)
T KOG4257|consen  476 ELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFG--LSRYLEDDAYYK-----  548 (974)
T ss_pred             hHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccc--hhhhccccchhh-----
Confidence            999999865  68899999999999999999999999999999999999999999999999  665333322110     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                  |                                                                   
T Consensus       549 ------------a-------------------------------------------------------------------  549 (974)
T KOG4257|consen  549 ------------A-------------------------------------------------------------------  549 (974)
T ss_pred             ------------c-------------------------------------------------------------------
Confidence                        0                                                                   


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                        +...-..-|||||.++-.+.+..+|.|.+|+.|+|++.-.+     
T Consensus       550 ----------------------------------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGv-----  590 (974)
T KOG4257|consen  550 ----------------------------------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGV-----  590 (974)
T ss_pred             ----------------------------------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcC-----
Confidence                                              00112346999999998888899999999999998876543     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                         -||.. ....+...+|-+|.+  ++.|.++++.+..|+.+||.+||.+||...++.
T Consensus       591 ---kPfqg-vkNsDVI~~iEnGeR--lP~P~nCPp~LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  591 ---KPFQG-VKNSDVIGHIENGER--LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             ---Ccccc-ccccceEEEecCCCC--CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence               37777 444455555556644  444677999999999999999999999998864

>KOG0199|consensus

Probab=99.94  E-value=8.8e-27  Score=229.98  Aligned_cols=252  Identities=16%  Similarity=0.195  Sum_probs=205.1

Q ss_pred             CCcceEEEEEecCCCce---eEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||.|+|+.|+.+....-   .+.||+|.+...... ....|++|+.+|.+|+|+|++++|++..+ ....+|+|+++.|+
T Consensus       118 LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGS  196 (1039)
T KOG0199|consen  118 LGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGS  196 (1039)
T ss_pred             hcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccch
Confidence            69999999998865543   367999998766544 56789999999999999999999999986 67889999999999


Q ss_pred             hHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          77 LTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        77 L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      |.+.+..   ..|.....+.++.||..|+.||..+++||||+-..|+++..--.+||+|||  +.+.+.....-      
T Consensus       197 LldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFG--LmRaLg~ned~------  268 (1039)
T KOG0199|consen  197 LLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFG--LMRALGENEDM------  268 (1039)
T ss_pred             HHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeeccc--ceeccCCCCcc------
Confidence            9999975   368889999999999999999999999999999999999999999999999  55433221110      


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                      |..                             
T Consensus       269 ------------------------------------------------Yvm-----------------------------  271 (1039)
T KOG0199|consen  269 ------------------------------------------------YVM-----------------------------  271 (1039)
T ss_pred             ------------------------------------------------eEe-----------------------------
Confidence                                                            000                             


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                       .....-...|+|||.++-..+...+|.|++|+.++||.++.-     
T Consensus       272 ---------------------------------~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGE-----  313 (1039)
T KOG0199|consen  272 ---------------------------------APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGE-----  313 (1039)
T ss_pred             ---------------------------------cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCC-----
Confidence                                             001123458999999999988899999999999999998732     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                         .|+.+ .....++..|..+  +.++.+..+++.+.+++.+||..+|++|||...+-..-++.++.+
T Consensus       314 ---ePW~G-~~g~qIL~~iD~~--erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp  376 (1039)
T KOG0199|consen  314 ---EPWVG-CRGIQILKNIDAG--ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQP  376 (1039)
T ss_pred             ---CCCCC-CCHHHHHHhcccc--ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCC
Confidence               26666 7788888888744  566667779999999999999999999999999876555555443

>KOG0984|consensus

Probab=99.93  E-value=3.7e-26  Score=196.47  Aligned_cols=211  Identities=22%  Similarity=0.311  Sum_probs=171.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHh-CCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|.++.+-+.+..+.+.-+|+|-+...-. ...++.++|+++..+ ..++.+|+||+.+...+.+|+.||.+ ..+|.
T Consensus        54 lGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~tSld  132 (282)
T KOG0984|consen   54 LGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DTSLD  132 (282)
T ss_pred             hcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hhhHH
Confidence            6899999998888888888899998875532 345677889998766 48999999999999999999999999 55887


Q ss_pred             HHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVTE-----TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+.++     +.+++.-+-+++..++.||.|||++ .++|||+||+||+++..|++|++|||  +...+.++..+.    
T Consensus       133 kfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFG--IsG~L~dSiAkt----  206 (282)
T KOG0984|consen  133 KFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFG--ISGYLVDSIAKT----  206 (282)
T ss_pred             HHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccc--cceeehhhhHHH----
Confidence            66542     3689999999999999999999998 99999999999999999999999999  555444333322    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                          -.+                                                                         
T Consensus       207 ----~da-------------------------------------------------------------------------  209 (282)
T KOG0984|consen  207 ----MDA-------------------------------------------------------------------------  209 (282)
T ss_pred             ----Hhc-------------------------------------------------------------------------
Confidence                122                                                                         


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec----CCCCcccCCCCccchhhhhcCCCC
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD----KNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                             |...|||||.+..    ..|..++|.||+|+.++||.++..
T Consensus       210 ---------------------------------------GCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~  250 (282)
T KOG0984|consen  210 ---------------------------------------GCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF  250 (282)
T ss_pred             ---------------------------------------CCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccc
Confidence                                                   3445555665543    345578899999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchh
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEK  343 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~  343 (400)
                               ||..--++.+++.++....+|.++..
T Consensus       251 ---------PY~~w~tpF~qLkqvVeep~P~Lp~~  276 (282)
T KOG0984|consen  251 ---------PYESWGTPFQQLKQVVEEPSPQLPAD  276 (282)
T ss_pred             ---------cccccCCHHHHHHHHhcCCCCCCccc
Confidence                     99998899999999999988888654

>KOG4278|consensus

Probab=99.93  E-value=6.3e-26  Score=221.29  Aligned_cols=239  Identities=16%  Similarity=0.221  Sum_probs=195.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||-|-|+.||-+-.+++...||+|-++.+. ...+.|+.|..+|+.++|+|+|+++++|.....+|+++|||.+|+|.++
T Consensus       275 LGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdY  353 (1157)
T KOG4278|consen  275 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDY  353 (1157)
T ss_pred             cCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHH
Confidence            578899999999999999999999987543 4678899999999999999999999999999999999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++-   .++.-..+.++.||..|+.||..+++||||+-..|++++.+..+|++|||  +++....+...          
T Consensus       354 LRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFG--LsRlMtgDTYT----------  421 (1157)
T KOG4278|consen  354 LRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFG--LSRLMTGDTYT----------  421 (1157)
T ss_pred             HHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccc--hhhhhcCCcee----------
Confidence            9853   46767778899999999999999999999999999999999999999999  66633333321          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                              |.                                                                      
T Consensus       422 --------AH----------------------------------------------------------------------  423 (1157)
T KOG4278|consen  422 --------AH----------------------------------------------------------------------  423 (1157)
T ss_pred             --------cc----------------------------------------------------------------------
Confidence                    11                                                                      


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                    .-..=..-|.|||-+.......++|.|++|++++|+.+-.+        .
T Consensus       424 ------------------------------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGM--------s  465 (1157)
T KOG4278|consen  424 ------------------------------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGM--------S  465 (1157)
T ss_pred             ------------------------------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCC--------C
Confidence                                          00011236888999998888889999999999988888766        3


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL  371 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~  371 (400)
                      ||.+ .+ +.+.+.++.+. .....++.+++.+.+|++.||+.+|++||+.+|+
T Consensus       466 PYPG-id-lSqVY~LLEkg-yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  466 PYPG-ID-LSQVYGLLEKG-YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             CCCC-cc-HHHHHHHHhcc-ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            6666 33 33444444331 2334466789999999999999999999999986

>KOG3653|consensus

Probab=99.93  E-value=4.1e-26  Score=217.09  Aligned_cols=134  Identities=24%  Similarity=0.385  Sum_probs=117.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh--CCCCCcccccceeEeCC----EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVGE----ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~   74 (400)
                      +|+|.|++||++.=..  ..||+|++..+   ..+.|++|-+|.+.  ++|+||++|+++-....    .+|+|++|.+.
T Consensus       218 i~~Grfg~V~KaqL~~--~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k  292 (534)
T KOG3653|consen  218 IGRGRFGCVWKAQLDN--RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK  292 (534)
T ss_pred             hhcCccceeehhhccC--ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence            5899999999986544  77999997644   45778889888876  58999999998765443    79999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---------CCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHS---------NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~---------~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      |+|.+++..+.+++....+++..+..||.|||+         .+|+|||||..||++..++.+.|+|||  ++..+
T Consensus       293 GsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG--LAl~~  366 (534)
T KOG3653|consen  293 GSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG--LALRL  366 (534)
T ss_pred             CcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc--eeEEe
Confidence            999999999999999999999999999999995         288999999999999999999999999  55533

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=3.2e-26  Score=245.35  Aligned_cols=219  Identities=13%  Similarity=0.055  Sum_probs=152.2

Q ss_pred             HhCCC-CCcccccceeE-------eCCEEEEEEeccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Q psy9736          45 RENKH-PNIVNYLDSYL-------VGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRD  114 (400)
Q Consensus        45 ~~l~h-~niv~~~~~~~-------~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~d  114 (400)
                      +.+.| +||++++++|.       ....+++++|++ +++|.+++..  ..+++..++.++.||+.||.|||++||+|||
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            34555 58888888772       223567788888 6699999964  3589999999999999999999999999999


Q ss_pred             CCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCc
Q psy9736         115 IKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPN  194 (400)
Q Consensus       115 ikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
                      |||+||+++..+.++++|||  .+.....+..                                                
T Consensus       106 lKP~NiLl~~~~~~k~~d~~--~~~~~~~~~~------------------------------------------------  135 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESA--SCSDSGSDED------------------------------------------------  135 (793)
T ss_pred             CCchhEEEcccCcEEEeecc--ccCccccccc------------------------------------------------
Confidence            99999999999999999999  3321111000                                                


Q ss_pred             hhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCC-------------
Q psy9736         195 IVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPP-------------  261 (400)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  261 (400)
                                                                          ..++.+|||......             
T Consensus       136 ----------------------------------------------------~~~ki~DfG~a~~~~~~~~~~~~~~~~~  163 (793)
T PLN00181        136 ----------------------------------------------------ATTKSREIGSSRREEILSERRIEKLEEV  163 (793)
T ss_pred             ----------------------------------------------------Ccccccccccccccccccccchhhhhcc
Confidence                                                                011122222211100             


Q ss_pred             ---CCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCC
Q psy9736         262 ---PSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP  338 (400)
Q Consensus       262 ---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~  338 (400)
                         ..........||+.|||||++.+..+...+|+||+||++|||++|.-         |+.....   ....+.....+
T Consensus       164 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~---------~~~~~~~---~~~~~~~~~~~  231 (793)
T PLN00181        164 KKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS---------SREEKSR---TMSSLRHRVLP  231 (793)
T ss_pred             ccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCC---------chhhHHH---HHHHHHHhhcC
Confidence               00111233578999999999999988899999999999999998753         4433111   11111111111


Q ss_pred             CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         339 EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       339 ~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ..  ...-.....+++.+||+.||.+||++.|+|+||||...
T Consensus       232 ~~--~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        232 PQ--ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             hh--hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            10  01123456789999999999999999999999999864

>KOG1152|consensus

Probab=99.92  E-value=2.1e-25  Score=216.46  Aligned_cols=189  Identities=21%  Similarity=0.278  Sum_probs=159.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------chHHHHHHHHHHHHhCC---CCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------PKKELIINEILVMRENK---HPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~   69 (400)
                      +|.|.|++|+++..++..--|++|.+...+-        .....+--||+||.+++   |+||++++++|++++.+|++|
T Consensus       569 lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~t  648 (772)
T KOG1152|consen  569 LGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLET  648 (772)
T ss_pred             ccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEe
Confidence            6999999999999999888888888764321        11233568999999996   999999999999999999999


Q ss_pred             eccC-CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          70 EYLP-GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        70 e~~~-~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      |... +.+|+++|... .+.+..++.|+.|+..|+++||+.||||||||-+|++++.+|.++|+|||  .+.        
T Consensus       649 e~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfg--saa--------  718 (772)
T KOG1152|consen  649 EVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFG--SAA--------  718 (772)
T ss_pred             cCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeecc--chh--------
Confidence            9984 55999999865 79999999999999999999999999999999999999999999999999  333        


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                       .+...+...+.||..|.|||.+.|..                          ......|+|.+|.+++..+-...+++
T Consensus       719 -~~ksgpfd~f~gtv~~aapevl~g~~--------------------------y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  719 -YTKSGPFDVFVGTVDYAAPEVLGGEK--------------------------YLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             -hhcCCCcceeeeeccccchhhhCCCc--------------------------cCCCcchhhhhhheeeEEEeccCCCc
Confidence             12233556789999999999999987                          55678899999999997766554443

>KOG0200|consensus

Probab=99.92  E-value=1.5e-24  Score=224.70  Aligned_cols=243  Identities=19%  Similarity=0.318  Sum_probs=192.4

Q ss_pred             CCcceEEEEEecCCC-------ceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDR-------RFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-------~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      +|.|.|+.|+.+.-.       .....||+|..+... ..+.+.+..|+++++.+ +|+||+.+++++..++..++++||
T Consensus       304 lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey  383 (609)
T KOG0200|consen  304 LGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEY  383 (609)
T ss_pred             eecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEe
Confidence            588999999888422       125678888876443 24567899999999998 799999999999998999999999


Q ss_pred             cCCCChHHHHhhcC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTETC-----------------MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~~-----------------l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +..|+|..+++...                 ++......++.||+.|++||++.+++|||+-..||++..+..+||+|||
T Consensus       384 ~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFG  463 (609)
T KOG0200|consen  384 AEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFG  463 (609)
T ss_pred             ccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEcccc
Confidence            99999999998665                 8899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        +++.......                                                       |...         
T Consensus       464 --lar~~~~~~~-------------------------------------------------------y~~~---------  477 (609)
T KOG0200|consen  464 --LARDHYNKDY-------------------------------------------------------YRTK---------  477 (609)
T ss_pred             --ceeccCCCCc-------------------------------------------------------eEec---------
Confidence              5542111110                                                       0000         


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCC--CCccCCCcceecCCCCcccC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNG--ALTSLPPPVVLDKNKNQTTP  292 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~d  292 (400)
                                                                            ...|  ...|||||.+....+..++|
T Consensus       478 ------------------------------------------------------~~~~~LP~kWmApEsl~~~~ft~kSD  503 (609)
T KOG0200|consen  478 ------------------------------------------------------SSAGTLPVKWMAPESLFDRVFTSKSD  503 (609)
T ss_pred             ------------------------------------------------------CCCCccceeecCHHHhccCcccccch
Confidence                                                                  0011  23599999999988889999


Q ss_pred             CCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         293 PTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       293 ~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      .||+|+++||+.+...        .||.......+....+..|.....  |...+..+.++++.||+.+|++||+..++.
T Consensus       504 VWSfGI~L~EifsLG~--------~PYp~~~~~~~l~~~l~~G~r~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  504 VWSFGILLWEIFTLGG--------TPYPGIPPTEELLEFLKEGNRMEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             hhHHHHHHHHHhhCCC--------CCCCCCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            9999999999988754        277663335555545556544333  455788999999999999999999999976


Q ss_pred             c
Q psy9736         373 K  373 (400)
Q Consensus       373 ~  373 (400)
                      .
T Consensus       574 ~  574 (609)
T KOG0200|consen  574 E  574 (609)
T ss_pred             H
Confidence            4

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.92  E-value=3.7e-24  Score=190.37  Aligned_cols=134  Identities=34%  Similarity=0.557  Sum_probs=121.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.+|++........+++|........ ..+.+.+|+..++.++|++++++++++......++++|++.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68899999999988877788899988755432 34678999999999999999999999998889999999998899999


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg  134 (400)
                      ++...  .++...+..++.+++.++.+||+.+++|+|++|.||+++. .+.++++|||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~  138 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFG  138 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCC
Confidence            99865  6899999999999999999999999999999999999999 8999999999

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1345|consensus

Probab=99.92  E-value=1.6e-24  Score=193.30  Aligned_cols=133  Identities=23%  Similarity=0.354  Sum_probs=119.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccce-eEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDS-YLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.|+++.+++.+.+...+++|.+.... ...+.|.+|...--.| .|.||+.-|++ |++.+.+++++||++.|+|.
T Consensus        32 lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~  110 (378)
T KOG1345|consen   32 LGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLR  110 (378)
T ss_pred             hcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhh
Confidence            689999999999999999999999986544 4667899998877666 68999998865 88888999999999999999


Q ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC--CCceEEeccc
Q psy9736          79 DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL--DGSVKLSKWN  134 (400)
Q Consensus        79 ~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~--~~~~~l~dfg  134 (400)
                      .-+...++.+...+.++.|++.|+.|||++++||||||.+||++..  ..++|++|||
T Consensus       111 snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG  168 (378)
T KOG1345|consen  111 SNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFG  168 (378)
T ss_pred             hhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecc
Confidence            9998888999999999999999999999999999999999999954  3689999999

>KOG1025|consensus

Probab=99.89  E-value=1.6e-23  Score=210.28  Aligned_cols=242  Identities=15%  Similarity=0.236  Sum_probs=195.1

Q ss_pred             CCcceEEEEEec----CCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSS----DDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~----~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++    +++.+.++|++|++..... .....++.|+.+|..+.|+|++++++++.... +.+|++|++.|
T Consensus       704 LGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G  782 (1177)
T KOG1025|consen  704 LGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLG  782 (1177)
T ss_pred             eccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccc
Confidence            699999999775    7888899999999876543 23577899999999999999999999998765 88999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.++++.+  .+.....+.+..||++|+.|||+++++||||-..|+++.+-..++++|||  ++..+..+....     
T Consensus       783 ~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfg--la~ll~~d~~ey-----  855 (1177)
T KOG1025|consen  783 CLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFG--LAKLLAPDEKEY-----  855 (1177)
T ss_pred             hHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecc--hhhccCcccccc-----
Confidence            999999854  68888999999999999999999999999999999999999999999999  776443333221     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                 .+|                                                                  
T Consensus       856 -----------~~~------------------------------------------------------------------  858 (1177)
T KOG1025|consen  856 -----------SAP------------------------------------------------------------------  858 (1177)
T ss_pred             -----------ccc------------------------------------------------------------------
Confidence                       111                                                                  


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                         ...-.+-|||=|.+...++.+.+|+|++|+.++|++|-.-     
T Consensus       859 -----------------------------------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa-----  898 (1177)
T KOG1025|consen  859 -----------------------------------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGA-----  898 (1177)
T ss_pred             -----------------------------------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCC-----
Confidence                                               0011246888898888888899999999999999887543     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         .||.. ....++-..+-++.+  ++-|...+-++..++-+||..|++.||+++++..
T Consensus       899 ---~Py~g-i~~~eI~dlle~geR--LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  899 ---KPYDG-IPAEEIPDLLEKGER--LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             ---CccCC-CCHHHhhHHHhcccc--CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence               26655 555555444444432  5556668889999999999999999999998753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=8.6e-23  Score=178.80  Aligned_cols=164  Identities=26%  Similarity=0.267  Sum_probs=126.9

Q ss_pred             CChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      |+|.+++..  ..+++..++.++.|++.||.|||+.+      ||+||+++.++.+++  ||  .+....          
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG--~~~~~~----------   60 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DG--SVAFKT----------   60 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--cc--ceEeec----------
Confidence            588888874  36999999999999999999999997      999999999999998  99  222000          


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus        61 --------------------------------------------------------------------------------   60 (176)
T smart00750       61 --------------------------------------------------------------------------------   60 (176)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                        .....||+.|+|||++.+..+...+|+||+|+++|||++|..    
T Consensus        61 ----------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~----  102 (176)
T smart00750       61 ----------------------------------PEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYEL----  102 (176)
T ss_pred             ----------------------------------cccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCC----
Confidence                                              000147889999999999888899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCC----cchhhhhcH--HHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPE----IKEKEKLSQ--IFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~----~~~~~~~s~--~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                           ||.........+..+.....+.    ...+..++.  .+.++|.+||..||++|||+.+++.|+|+....
T Consensus       103 -----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      103 -----PYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             -----CccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence                 8866333333333333332221    112334554  699999999999999999999999999987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.87  E-value=1.1e-21  Score=177.49  Aligned_cols=134  Identities=33%  Similarity=0.552  Sum_probs=121.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      +|.|.++.+|.+.......++++|........ ..+.+.+|+..++.++|+|++++++.+..+...++++|++++++|.+
T Consensus         7 i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   86 (225)
T smart00221        7 LGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFD   86 (225)
T ss_pred             eecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHH
Confidence            57888889999988777778888888765544 56788999999999999999999999998889999999999889999


Q ss_pred             HHhhc-C-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          80 VVTET-C-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~-~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ++... . +++..+..++.+++.++.++|+.+++|+|++|.||+++..+.++|+|||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g  143 (225)
T smart00221       87 YLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFG  143 (225)
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCc
Confidence            99765 3 8999999999999999999999999999999999999999999999999

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1165|consensus

Probab=99.86  E-value=1.6e-21  Score=178.68  Aligned_cols=195  Identities=17%  Similarity=0.212  Sum_probs=178.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+..+.+++-..+..||||-....++  ..++..|....+.| ..++|...|-+.+.+.+..||+|++ |++|.+
T Consensus        36 IGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLED  112 (449)
T KOG1165|consen   36 IGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLED  112 (449)
T ss_pred             cccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHH
Confidence            7999999999999999999999998765544  35578899988888 6789999998888888999999999 889999


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-----CceEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-----GSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++.-  +.|+..++.+++.|++.-++++|++.+|.|||||+|++|+.-     ..+.++|||  .|..+.+..++.+++.
T Consensus       113 LFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG--mAK~YrDp~TkqHIPY  190 (449)
T KOG1165|consen  113 LFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFG--MAKEYRDPKTKQHIPY  190 (449)
T ss_pred             HHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEecc--chhhhcCccccccCcc
Confidence            9984  479999999999999999999999999999999999999865     458999999  9998999999999999


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+.....||+.||+....+|++                           ..+.+|+-++|+++.-+|.|..+|++
T Consensus       191 rE~KSLsGTARYMSINTHlGrE---------------------------QSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  191 REHKSLSGTARYMSINTHLGRE---------------------------QSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             ccccccccceeeeEeeccccch---------------------------hhhhhhHHHhhhhhhhhccCCCcccc
Confidence            9999999999999999999998                           56888999999999999999999986

>KOG0590|consensus

Probab=99.84  E-value=1.3e-21  Score=200.80  Aligned_cols=218  Identities=18%  Similarity=0.230  Sum_probs=160.7

Q ss_pred             HHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Q psy9736          37 IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDI  115 (400)
Q Consensus        37 ~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~di  115 (400)
                      +..|..+-..+.|+|++.....+.........||||++ +|+.++... .+....+..++.|++.|++|+|+.|+.|||+
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrdl  446 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDL  446 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccC
Confidence            55666666778999998887777665555555999999 999999876 7899999999999999999999999999999


Q ss_pred             CCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCch
Q psy9736         116 KSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNI  195 (400)
Q Consensus       116 kp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
                      |++|+++..+|.++|+|||  .+..+..+.+..                                               
T Consensus       447 K~enll~~~~g~lki~Dfg--~~~vf~~~~e~~-----------------------------------------------  477 (601)
T KOG0590|consen  447 KLENLLVTENGILKIIDFG--AASVFRYPWEKN-----------------------------------------------  477 (601)
T ss_pred             ccccEEEecCCceEEeecC--cceeeccCcchh-----------------------------------------------
Confidence            9999999999999999999  333222211111                                               


Q ss_pred             hhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCc
Q psy9736         196 VNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALT  275 (400)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  275 (400)
                                                                                          ..-....+|+-.
T Consensus       478 --------------------------------------------------------------------~~~~~g~~gS~p  489 (601)
T KOG0590|consen  478 --------------------------------------------------------------------IHESSGIVGSDP  489 (601)
T ss_pred             --------------------------------------------------------------------hhhhcCcccCCc
Confidence                                                                                000122378889


Q ss_pred             cCCCcceecCCCC-cccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhC-CC----CCcchhhhhcHH
Q psy9736         276 SLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN-KK----PEIKEKEKLSQI  349 (400)
Q Consensus       276 y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~-~~----~~~~~~~~~s~~  349 (400)
                      |+|||++.+..|. ...|+|+.|+++..|..|..         |+.........+...... ..    ...+-...++..
T Consensus       490 Y~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~---------~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~  560 (601)
T KOG0590|consen  490 YLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRF---------PWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRE  560 (601)
T ss_pred             CcCcccccccccCcchhhhhhccceEEEEecCCC---------ccccccccccchhhhccccccccccChHHHHHhchhh
Confidence            9999999998888 46789999988888888865         443311111110111111 00    011113446678


Q ss_pred             HHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         350 FQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       350 ~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      .+.+|.+||+.||.+|+|++++++.+|++...
T Consensus       561 ~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  561 TRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            89999999999999999999999999999754

>KOG1163|consensus

Probab=99.83  E-value=2.9e-20  Score=163.73  Aligned_cols=197  Identities=19%  Similarity=0.212  Sum_probs=173.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC-CCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.++.+.+-..+..||+|..+....  ..++..|..+.+.|++ ..|..+..++.+..+..+||+++ |++|.+
T Consensus        23 iGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEd   99 (341)
T KOG1163|consen   23 IGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLED   99 (341)
T ss_pred             ecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHH
Confidence            6999999999999999999999999764432  3457789999999865 57777777788888899999999 889999


Q ss_pred             HHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++.  ...++..+++.++-|++.-++|+|.++++||||||+|++.+-+   ..+-++|||  ++.++.+-.+..+++...
T Consensus       100 LfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG--LaKky~d~~t~~HIpyre  177 (341)
T KOG1163|consen  100 LFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG--LAKKYRDIRTRQHIPYRE  177 (341)
T ss_pred             HHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc--chhhhccccccccCcccc
Confidence            887  4579999999999999999999999999999999999999765   567899999  898888888899999999


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      ....+||+.|++.....|.+                           ..+.+|+-|+|-++.-+..|..+|++-.
T Consensus       178 ~r~ltGTaRYASinAh~g~e---------------------------qSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  178 DRNLTGTARYASINAHLGIE---------------------------QSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             CCccceeeeehhhhhhhhhh---------------------------hhhhhhhhhhcceeeeeecCCCcccccc
Confidence            99999999999988888765                           5678899999999999999999998744

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=9.8e-20  Score=176.12  Aligned_cols=162  Identities=19%  Similarity=0.112  Sum_probs=120.2

Q ss_pred             CCcceEEEEEecCCCc-eeEEEEecccccc-----CcchHHHHHHHHHHHHhCCCCCccc-ccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR-FFSKILSNPITLA-----QQPKKELIINEILVMRENKHPNIVN-YLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-~~~~va~K~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|++||++.... ....||+|.+...     .....+.+.+|+.++++++|+|++. +++.    +..++||||++
T Consensus        26 IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~  101 (365)
T PRK09188         26 LKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTE  101 (365)
T ss_pred             EeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccC
Confidence            6899999999997654 3455688775422     1223567899999999999999985 4432    45799999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC-CCCceEecCCCceEEeccchhhhhhhccccch-hhcc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDI-KSDNILLGLDGSVKLSKWNRFIATKLYIEISK-VIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~di-kp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~  151 (400)
                      |++|... ..  ..   ...++.+++.+|.|||+.||+|||| ||+||+++.++.++|+|||  +++.+...... ....
T Consensus       102 G~~L~~~-~~--~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFG--lA~~~~~~~~~~~~~~  173 (365)
T PRK09188        102 GVPLHLA-RP--HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQ--LASVFRRRGALYRIAA  173 (365)
T ss_pred             CCCHHHh-Cc--cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECc--cceecccCcchhhhhh
Confidence            9999632 11  11   2467889999999999999999999 9999999999999999999  66544332211 1112


Q ss_pred             ccccccccccceeeehhhccCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      ..+.....++..|+|||.+.-++
T Consensus       174 ~~d~~~~~~~~~~~~pe~~~~~~  196 (365)
T PRK09188        174 YEDLRHLLKHKRTYAPDALTPRE  196 (365)
T ss_pred             hhhhhhhhccCccCCcccCChhh
Confidence            22346777888899999987655

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.79  E-value=3.9e-18  Score=160.89  Aligned_cols=255  Identities=28%  Similarity=0.372  Sum_probs=189.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCCC-CcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKHP-NIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|.|+.++.+...   ..+++|.+......   ..+.+.+|+.++..+.|+ +++++++.+......+++++++.+++
T Consensus         8 l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~   84 (384)
T COG0515           8 LGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGS   84 (384)
T ss_pred             ecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCc
Confidence            578999999998887   44455554433222   367789999999999888 79999999987778899999999999


Q ss_pred             hHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhcc
Q psy9736          77 LTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        77 L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +.+++...    .+.......++.|++.++.|+|..+++|||+||+||+++..+ .++++|||  .+..........   
T Consensus        85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg--~~~~~~~~~~~~---  159 (384)
T COG0515          85 LEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFG--LAKLLPDPGSTS---  159 (384)
T ss_pred             HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccC--cceecCCCCccc---
Confidence            99777754    589999999999999999999999999999999999999998 79999999  433111111000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                            ..        
T Consensus       160 ----------------------------------------------------------------------~~--------  161 (384)
T COG0515         160 ----------------------------------------------------------------------SI--------  161 (384)
T ss_pred             ----------------------------------------------------------------------cc--------
Confidence                                                                                  00        


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                      ........||..|+|||.+..   .......|.|++|+++++++.|..
T Consensus       162 --------------------------------~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~  209 (384)
T COG0515         162 --------------------------------PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP  209 (384)
T ss_pred             --------------------------------cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence                                            011345578999999999987   455578899999999999999987


Q ss_pred             cccccccccCcchhhc---HHHHHHHHHhCCCCCcchhhhh------cHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         309 WSFQPHFLIPYLFILS---CRQALYLIATNKKPEIKEKEKL------SQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~---~~~~~~~i~~~~~~~~~~~~~~------s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                               ||.....   .......+.....+........      ...+.+++.+++..+|..|.+..+...++|...
T Consensus       210 ---------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         210 ---------PFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             ---------CCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence                     7555332   2333333333322201111111      247899999999999999999999999877765


Q ss_pred             cCC
Q psy9736         380 ARP  382 (400)
Q Consensus       380 ~~~  382 (400)
                      ...
T Consensus       281 ~~~  283 (384)
T COG0515         281 LKL  283 (384)
T ss_pred             ccc
Confidence            443

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=1.6e-18  Score=155.73  Aligned_cols=129  Identities=16%  Similarity=0.155  Sum_probs=105.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-----CCCCcccccceeEeCC---E-EEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-----KHPNIVNYLDSYLVGE---E-LWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~~~~~~~~~~---~-~~lv~e~   71 (400)
                      ||+|+++.||.  ...++.+ ++|++........+.+.+|+.+++.+     .|+||+++++++.++.   . +.+|+||
T Consensus        10 LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~   86 (210)
T PRK10345         10 LGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADF   86 (210)
T ss_pred             ecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecC
Confidence            69999999996  5556666 58887665444567799999999999     5799999999999873   4 4478999


Q ss_pred             --cCCCChHHHHhhcCCCHHHHHHHHHHHHHHH-HHHHhCCeecCCCCCCceEecCC----CceEEeccc
Q psy9736          72 --LPGGSLTDVVTETCMDEGQIAAVCREVLQAL-EFLHSNQVIHRDIKSDNILLGLD----GSVKLSKWN  134 (400)
Q Consensus        72 --~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l-~~lH~~~ivH~dikp~nil~~~~----~~~~l~dfg  134 (400)
                        +.+++|.+++++..+++.  ..++.+++.++ .|||+++|+||||||+||+++..    +.++|+||+
T Consensus        87 ~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         87 DGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             CCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence              557899999987766665  35678888777 99999999999999999999753    379999954

>KOG1024|consensus

Probab=99.77  E-value=8.3e-19  Score=163.93  Aligned_cols=240  Identities=17%  Similarity=0.229  Sum_probs=184.2

Q ss_pred             cceEEEEEecCCC--cee---EEEEecccc-ccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC-CEEEEEEeccCCC
Q psy9736           3 RGVTIDRFSSDDR--RFF---SKILSNPIT-LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-EELWVVMEYLPGG   75 (400)
Q Consensus         3 ~G~~~~v~~~~~~--~~~---~~va~K~~~-~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~   75 (400)
                      .|.|+.++.+...  .+.   ..|.+|-++ .+++.+...++.|--++..+.|+|+.++.++...+ ...++++.++..|
T Consensus       294 EGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~g  373 (563)
T KOG1024|consen  294 EGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVG  373 (563)
T ss_pred             cCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcc
Confidence            5888888887211  111   235555543 22344456678888888889999999999887765 4678889999889


Q ss_pred             ChHHHHhh---------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          76 SLTDVVTE---------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        76 ~L~~~i~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +|..++..         +.++..+...++.|+..|+.|+|.+++||.||-..|++++..-++||+|=.  +.+.+.+...
T Consensus       374 NLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa--LSRDLFP~DY  451 (563)
T KOG1024|consen  374 NLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA--LSRDLFPGDY  451 (563)
T ss_pred             hHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch--hccccCcccc
Confidence            99998871         246777888999999999999999999999999999999999999999954  4443322221


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ..                                                       -|+                    
T Consensus       452 hc-------------------------------------------------------LGD--------------------  456 (563)
T KOG1024|consen  452 HC-------------------------------------------------------LGD--------------------  456 (563)
T ss_pred             cc-------------------------------------------------------cCC--------------------
Confidence            11                                                       000                    


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                                .-....-||+||.+.+..+...+|.|++|+.++||++.
T Consensus       457 ------------------------------------------nEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtl  494 (563)
T KOG1024|consen  457 ------------------------------------------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTL  494 (563)
T ss_pred             ------------------------------------------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhc
Confidence                                                      01234579999999999998999999999999999886


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      .-        .||.. -+|.+...-+..|.  .+.-|.+.++++...+-=||..+|++||+.+++.
T Consensus       495 g~--------~Pyae-IDPfEm~~ylkdGy--RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  495 GK--------LPYAE-IDPFEMEHYLKDGY--RLAQPFNCPDELFTVMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             CC--------CCccc-cCHHHHHHHHhccc--eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence            43        37777 78888887777774  4455778899999999999999999999999975

>KOG0603|consensus

Probab=99.77  E-value=2.8e-19  Score=176.69  Aligned_cols=233  Identities=19%  Similarity=0.277  Sum_probs=184.6

Q ss_pred             CCcceEEEEEecC-------CCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD-------DRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~-------~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      +|.|+|++|++++       +.-++.+|..|.--......  .-..|-.++...+ |+.++++...|+.+...+++.++.
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            5889999998763       22334555444432222222  3456788888886 999999999999999999999999


Q ss_pred             CCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .++.++..+... .+.+..+..+...++.+++++|+.+++++|+|++||+++..|.+++.|||  ..+.    .-+    
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfg--lske----~v~----  149 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFG--LSKE----AVK----  149 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCch--hhhH----hHh----
Confidence            898988877654 57888899999999999999999999999999999999999999999999  3321    100    


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       150 --------------------------------------------------------------------------------  149 (612)
T KOG0603|consen  150 --------------------------------------------------------------------------------  149 (612)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                         ....|||..|||||+++  .+....|.|++|.++|||++|-.   
T Consensus       150 -----------------------------------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~---  189 (612)
T KOG0603|consen  150 -----------------------------------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTL---  189 (612)
T ss_pred             -----------------------------------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCC---
Confidence                                               01118999999999999  33478899999999999999977   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  379 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~  379 (400)
                            ||..     +....|++.....   +..++..+.++++.++..+|.+|.-.     .++++|+||+.
T Consensus       190 ------pf~~-----~~~~~Il~~~~~~---p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~  248 (612)
T KOG0603|consen  190 ------PFGG-----DTMKRILKAELEM---PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQS  248 (612)
T ss_pred             ------CCch-----HHHHHHhhhccCC---chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchhee
Confidence                  8877     6666676654332   44578899999999999999999866     68899999985

>KOG1240|consensus

Probab=99.74  E-value=6.4e-19  Score=182.48  Aligned_cols=134  Identities=20%  Similarity=0.213  Sum_probs=105.1

Q ss_pred             CCcceEEEEEecCCCce--eEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRF--FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~--~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||++.|.++.++++.+-  ..||.+|.-..-.-...++-..|+. ..-++++|.+.|-.+..++...|+|=+|..+ +|+
T Consensus        31 LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLy  108 (1431)
T KOG1240|consen   31 LGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLY  108 (1431)
T ss_pred             cCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhh
Confidence            68899999998876553  4555555542222222333344454 4446999999998888888888899999944 999


Q ss_pred             HHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchh
Q psy9736          79 DVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF  136 (400)
Q Consensus        79 ~~i~~~~-l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~  136 (400)
                      |.+.-++ +...+.+.|+.|++.|+.-+|..||+|||||.+||++.+=+.+.|+||..|
T Consensus       109 DRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  109 DRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhccccc
Confidence            9998664 677788999999999999999999999999999999999999999999844

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.74  E-value=7.1e-18  Score=149.83  Aligned_cols=130  Identities=13%  Similarity=0.171  Sum_probs=101.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--h------------------------HHHHHHHHHHHHhCCCCCccc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--K------------------------KELIINEILVMRENKHPNIVN   54 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~------------------------~~~~~~Ei~~l~~l~h~niv~   54 (400)
                      ||.|+++.||.+... .+..||+|.+......  .                        .....+|+.++.++.++++..
T Consensus         5 ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~   83 (190)
T cd05147           5 ISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPC   83 (190)
T ss_pred             cccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence            699999999999886 6788888887643210  0                        112245999999998877754


Q ss_pred             ccceeEeCCEEEEEEeccCCCChHHH-HhhcCCCHHHHHHHHHHHHHHHHHH-HhCCeecCCCCCCceEecCCCceEEec
Q psy9736          55 YLDSYLVGEELWVVMEYLPGGSLTDV-VTETCMDEGQIAAVCREVLQALEFL-HSNQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        55 ~~~~~~~~~~~~lv~e~~~~~~L~~~-i~~~~l~~~~~~~i~~qi~~~l~~l-H~~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      .......  ..++||||++++++... +....++...+..++.|++.+|.++ |+.||+||||||+||+++ ++.++++|
T Consensus        84 p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiD  160 (190)
T cd05147          84 PEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIID  160 (190)
T ss_pred             CcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEE
Confidence            4333222  23899999988776544 4456789999999999999999999 689999999999999998 57899999


Q ss_pred             cc
Q psy9736         133 WN  134 (400)
Q Consensus       133 fg  134 (400)
                      ||
T Consensus       161 FG  162 (190)
T cd05147         161 VS  162 (190)
T ss_pred             cc
Confidence            99

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1164|consensus

Probab=99.74  E-value=6.4e-18  Score=162.73  Aligned_cols=197  Identities=21%  Similarity=0.230  Sum_probs=157.3

Q ss_pred             CCcceEEEEEecCCCcee-EEEEeccccccCcchHHHHHHHHHHHHhCCC----CCccccccee-EeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFF-SKILSNPITLAQQPKKELIINEILVMRENKH----PNIVNYLDSY-LVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~-~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h----~niv~~~~~~-~~~~~~~lv~e~~~~   74 (400)
                      ||.|+|+.||.+.+.... ..+|+|............+..|+.++..+..    .++..+++.+ ..+...|+||+.+ |
T Consensus        26 iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G  104 (322)
T KOG1164|consen   26 IGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-G  104 (322)
T ss_pred             ccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-C
Confidence            689999999999876664 5566676654432222257889999998862    6888888888 4777899999999 8


Q ss_pred             CChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-----CceEEeccchhhhh--hhccc
Q psy9736          75 GSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-----GSVKLSKWNRFIAT--KLYIE  144 (400)
Q Consensus        75 ~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-----~~~~l~dfg~~~~~--~~~~~  144 (400)
                      .+|.++...   +.++..++..++.|++.+|.++|+.|++||||||.|++++..     ..+.+.|||  +++  .....
T Consensus       105 ~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG--lar~~~~~~~  182 (322)
T KOG1164|consen  105 PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG--LARRFKYVGD  182 (322)
T ss_pred             ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC--CCccccccCC
Confidence            899998853   369999999999999999999999999999999999999876     358999999  666  33333


Q ss_pred             cchhhccccc-cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         145 ISKVIIYCWD-WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       145 ~~~~~~~~~~-~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .......... ...+.||..|+++....|.+                           ..+.+|+|+++-++.+++.|..
T Consensus       183 ~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e---------------------------~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  183 SGGNLRPPRPQKGLFRGTLRYASINVHLGIE---------------------------QGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             CCcccccCCCCccCCCCccccccHHHhCCCc---------------------------cCCchhhhhHHHHHHHHhcCCC
Confidence            3222223333 46778999999999999987                           5689999999999999999998


Q ss_pred             cccc
Q psy9736         224 LWYT  227 (400)
Q Consensus       224 ~~~~  227 (400)
                      +|..
T Consensus       236 PW~~  239 (322)
T KOG1164|consen  236 PWEA  239 (322)
T ss_pred             CCcc
Confidence            8854

>KOG4158|consensus

Probab=99.71  E-value=4.1e-17  Score=153.09  Aligned_cols=199  Identities=22%  Similarity=0.341  Sum_probs=138.8

Q ss_pred             CCCCcccccceeEeC---------------------------CEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHH
Q psy9736          48 KHPNIVNYLDSYLVG---------------------------EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQ  100 (400)
Q Consensus        48 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~  100 (400)
                      +|||||++..+|.+.                           ...|+||.-. ..+|.+++-.+..+-.....++.|++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~~s~r~~~~~laQlLE  352 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRHRSYRTGRVILAQLLE  352 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCCCchHHHHHHHHHHHH
Confidence            699999998887651                           2578888877 458988887766777888999999999


Q ss_pred             HHHHHHhCCeecCCCCCCceEec--CC--CceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCc
Q psy9736         101 ALEFLHSNQVIHRDIKSDNILLG--LD--GSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPK  176 (400)
Q Consensus       101 ~l~~lH~~~ivH~dikp~nil~~--~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~  176 (400)
                      |+.|||++||.|||+|.+||++.  .+  ..+.++||||.++-..   ...+....-..-+.-|-...+|||+++..+  
T Consensus       353 av~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~---hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P--  427 (598)
T KOG4158|consen  353 AVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN---HGLQLPYESDEVDLGGNAKLMAPEIATAVP--  427 (598)
T ss_pred             HHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccc---cccccccccccccCCCcceecchhhhhcCC--
Confidence            99999999999999999999983  33  4578999995544311   001111111112223334466666655433  


Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCC
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSL  256 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (400)
                                                                                                      
T Consensus       428 --------------------------------------------------------------------------------  427 (598)
T KOG4158|consen  428 --------------------------------------------------------------------------------  427 (598)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcch----hhcHHHHHHHH
Q psy9736         257 IQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLF----ILSCRQALYLI  332 (400)
Q Consensus       257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~----~~~~~~~~~~i  332 (400)
                                     |      |-+..+-   .+.|.|+.|++.||+++...         ||++    ..+...    -
T Consensus       428 ---------------G------p~avvny---~kAD~WA~GalaYEIfg~~N---------PFY~rGem~L~~r~----Y  470 (598)
T KOG4158|consen  428 ---------------G------PNAVVNY---EKADTWAAGALAYEIFGRSN---------PFYKRGEMLLDTRT----Y  470 (598)
T ss_pred             ---------------C------Cceeecc---chhhhhhhhhhHHHHhccCC---------cccccchheechhh----h
Confidence                           1      3333332   77899999999999999877         9988    111111    1


Q ss_pred             HhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH
Q psy9736         333 ATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL  371 (400)
Q Consensus       333 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~  371 (400)
                      ...+-|.+  ++.+++.+++|+..+|+.||++|+++.-+
T Consensus       471 qe~qLPal--p~~vpp~~rqlV~~lL~r~pskRvsp~iA  507 (598)
T KOG4158|consen  471 QESQLPAL--PSRVPPVARQLVFDLLKRDPSKRVSPNIA  507 (598)
T ss_pred             hhhhCCCC--cccCChHHHHHHHHHhcCCccccCCccHH
Confidence            12233444  44588899999999999999999997654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.70  E-value=8.6e-17  Score=143.03  Aligned_cols=133  Identities=13%  Similarity=0.128  Sum_probs=104.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--------------------------hHHHHHHHHHHHHhCCCCCccc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--------------------------KKELIINEILVMRENKHPNIVN   54 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--------------------------~~~~~~~Ei~~l~~l~h~niv~   54 (400)
                      ||.|+++.||.+.+. .+..||+|........                          ....+.+|...+.++.|+++..
T Consensus         5 ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (190)
T cd05145           5 ISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPV   83 (190)
T ss_pred             eecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            689999999999876 6777888877644210                          0122457899999999988755


Q ss_pred             ccceeEeCCEEEEEEeccCCCChHH-HHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEec
Q psy9736          55 YLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        55 ~~~~~~~~~~~~lv~e~~~~~~L~~-~i~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      ...+....  .++||||++|+++.. .+....++......++.|++.++.++|+ .|++||||||+||+++ ++.++|+|
T Consensus        84 p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liD  160 (190)
T cd05145          84 PEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIID  160 (190)
T ss_pred             ceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEE
Confidence            44333322  489999998875543 3555578888999999999999999999 9999999999999998 89999999


Q ss_pred             cchhhhh
Q psy9736         133 WNRFIAT  139 (400)
Q Consensus       133 fg~~~~~  139 (400)
                      ||  ++.
T Consensus       161 FG--~a~  165 (190)
T cd05145         161 VS--QAV  165 (190)
T ss_pred             cc--cce
Confidence            99  554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0606|consensus

Probab=99.69  E-value=2.7e-17  Score=170.31  Aligned_cols=106  Identities=18%  Similarity=0.181  Sum_probs=90.6

Q ss_pred             CccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhc
Q psy9736         268 STLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLS  347 (400)
Q Consensus       268 ~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s  347 (400)
                      ..++|||.|+|||++....|+...|.|++|+++||++.|-+         ||++ +.+++.+.+++..........+.+.
T Consensus       216 KqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcv---------pffG-dtpeelfg~visd~i~wpE~dea~p  285 (1205)
T KOG0606|consen  216 KQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV---------PFFG-DTPEELFGQVISDDIEWPEEDEALP  285 (1205)
T ss_pred             ccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeee---------eccC-CCHHHHHhhhhhhhccccccCcCCC
Confidence            45699999999999999999999999999999999999987         9999 8999999999888554444445578


Q ss_pred             HHHHHHHHHhhhhhhhhhh---cHHHHhcCccccccCCC
Q psy9736         348 QIFQDFLDQCLEEEVETRA---SASLLLKHPFLKIARPL  383 (400)
Q Consensus       348 ~~~~dli~~~L~~dP~~R~---s~~~~l~hp~~~~~~~~  383 (400)
                      ++++++|.++|+.+|..|.   .+-++.+|+||+.-.-+
T Consensus       286 ~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  286 PEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             HHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence            8999999999999999995   45578899999974444

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=2.9e-16  Score=139.28  Aligned_cols=122  Identities=21%  Similarity=0.168  Sum_probs=98.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch----HHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK----KELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~----~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      +++|+|++|+.+.+  -..+++.+.+.......    ...+.+|+++|++++ |+++.+++++    ...+++|+|+.|.
T Consensus        10 l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~   83 (218)
T PRK12274         10 LKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGA   83 (218)
T ss_pred             ecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCc
Confidence            58999999998877  44678877665544322    235789999999995 5789998875    3468999999998


Q ss_pred             ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC-CCCceEecCCCceEEeccc
Q psy9736          76 SLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDI-KSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        76 ~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~di-kp~nil~~~~~~~~l~dfg  134 (400)
                      +|.+.....      ...++.|++.++.++|+.||+|||| ||+||+++.+|.++|+|||
T Consensus        84 ~L~~~~~~~------~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG  137 (218)
T PRK12274         84 AMYQRPPRG------DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQ  137 (218)
T ss_pred             cHHhhhhhh------hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECC
Confidence            987654321      2357789999999999999999999 7999999999999999999

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.65  E-value=7e-16  Score=139.50  Aligned_cols=124  Identities=16%  Similarity=0.280  Sum_probs=99.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHH---------HHHHHHHHHhCCCCCcccccceeEeC--------C
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKEL---------IINEILVMRENKHPNIVNYLDSYLVG--------E   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~---------~~~Ei~~l~~l~h~niv~~~~~~~~~--------~   63 (400)
                      +|.|.++.|++..+.  ..++++|..........+.         +.+|+..+.++.|++|..+.+++...        +
T Consensus        39 l~~~~f~~v~l~~~~--~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~  116 (232)
T PRK10359         39 FRNIDDTKVSLIDTD--YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAH  116 (232)
T ss_pred             ecCCCceEEEEEecC--CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccC
Confidence            478999999998763  5578889876443222222         57899999999999999998886643        3


Q ss_pred             EEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          64 ELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ..+++|||++|.+|.+...   +++    ....+++.++..+|+.|++|+|++|+||+++.+| ++++|||
T Consensus       117 ~~~lvmEyi~G~tL~~~~~---~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg  179 (232)
T PRK10359        117 TYIMLIEYIEGVELNDMPE---ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS  179 (232)
T ss_pred             CeEEEEEEECCccHHHhhh---ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence            5899999999999987632   333    2456899999999999999999999999999989 9999999

>KOG1023|consensus

Probab=99.60  E-value=2.7e-15  Score=148.32  Aligned_cols=91  Identities=27%  Similarity=0.486  Sum_probs=84.0

Q ss_pred             HHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCCCce
Q psy9736          44 MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQV-IHRDIKSDNI  120 (400)
Q Consensus        44 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i-vH~dikp~ni  120 (400)
                      |+.+.|.|+.+|++.+.++...+.+.+||..|+|.+.+...  .++.-....+++.++.|+.|+|...| .|+.++..|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            35689999999999999999999999999999999999875  57777888899999999999998866 8999999999


Q ss_pred             EecCCCceEEeccc
Q psy9736         121 LLGLDGSVKLSKWN  134 (400)
Q Consensus       121 l~~~~~~~~l~dfg  134 (400)
                      +++..+.+|++|||
T Consensus        81 lvd~~w~lklt~~G   94 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFG   94 (484)
T ss_pred             eeeeeEEEEechhh
Confidence            99999999999999

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.59  E-value=1e-14  Score=131.56  Aligned_cols=128  Identities=22%  Similarity=0.325  Sum_probs=104.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|.++.||.+..  .+.++++|.......        ...+++.+|+.++..+.|+++.....++......+++|||+
T Consensus         4 l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          4 IKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            68999999999965  344566665443221        12346789999999999998887776776777889999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +|++|.+.+....  . ....++.+++.++.++|+.+++|+|++|.||+++ .+.++++|||
T Consensus        82 ~G~~L~~~~~~~~--~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~  139 (211)
T PRK14879         82 EGEPLKDLINSNG--M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFG  139 (211)
T ss_pred             CCcCHHHHHHhcc--H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECC
Confidence            9999999886532  2 7889999999999999999999999999999999 7889999999

>smart00090 RIO RIO-like kinase

Probab=99.58  E-value=1.1e-14  Score=133.77  Aligned_cols=131  Identities=15%  Similarity=0.120  Sum_probs=100.8

Q ss_pred             CCcceEEEEEecC-CCceeEEEEeccccccCcc------------------------hHHHHHHHHHHHHhCCCCCcccc
Q psy9736           1 MKRGVTIDRFSSD-DRRFFSKILSNPITLAQQP------------------------KKELIINEILVMRENKHPNIVNY   55 (400)
Q Consensus         1 ~g~G~~~~v~~~~-~~~~~~~va~K~~~~~~~~------------------------~~~~~~~Ei~~l~~l~h~niv~~   55 (400)
                      ||.|+++.||.+. +...+..||+|.+......                        ....+.+|+.+++++.+. .+.+
T Consensus        36 Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~-~i~~  114 (237)
T smart00090       36 ISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA-GVPV  114 (237)
T ss_pred             eccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence            6899999999998 6667788899887643210                        112356899999999653 3333


Q ss_pred             cceeEeCCEEEEEEeccCCCChHHHH-hhcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCCCceEecCCCceEEecc
Q psy9736          56 LDSYLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKW  133 (400)
Q Consensus        56 ~~~~~~~~~~~lv~e~~~~~~L~~~i-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~nil~~~~~~~~l~df  133 (400)
                      ...+... ..++||||+++.++.... ....+....+..++.|++.++.+||+.| ++|+|+||+||+++ .+.++++||
T Consensus       115 p~~~~~~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDF  192 (237)
T smart00090      115 PKPIAWR-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDV  192 (237)
T ss_pred             CeeeEec-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEC
Confidence            3333222 358999999888876654 3345666678899999999999999999 99999999999999 889999999


Q ss_pred             c
Q psy9736         134 N  134 (400)
Q Consensus       134 g  134 (400)
                      |
T Consensus       193 g  193 (237)
T smart00090      193 S  193 (237)
T ss_pred             h
Confidence            9

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.56  E-value=2.1e-14  Score=128.39  Aligned_cols=125  Identities=20%  Similarity=0.282  Sum_probs=99.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC----c----chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ----Q----PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~----~----~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+++.||.+..  .+.++++|......    .    ...+++.+|+.+++.+.|.++....-++......+++|||+
T Consensus         2 ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         2 IAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            68999999999973  34567777643221    1    12356789999999998887665555555566778999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +|++|.+.+.....      .++.+++.++.++|+.+++|+|++|.||+++ ++.++++|||
T Consensus        80 ~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg  134 (199)
T TIGR03724        80 EGKPLKDVIEEGND------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFG  134 (199)
T ss_pred             CCccHHHHHhhcHH------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECC
Confidence            99999988764311      7889999999999999999999999999999 8999999999

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590|consensus

Probab=99.56  E-value=5e-16  Score=159.81  Aligned_cols=252  Identities=20%  Similarity=0.215  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCCce-eEEEEeccccccC--cchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF-FSKILSNPITLAQ--QPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      +|.|.+..+........ ...++.|.+....  ....+....|..+-+.+. |.|++++++........++.++|..+++
T Consensus        28 ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~  107 (601)
T KOG0590|consen   28 IGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGS  107 (601)
T ss_pred             ccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccc
Confidence            47788887777766443 3667777776554  333455667888888886 9999999999999999999999999999


Q ss_pred             hHHHH-hhc--CCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhcc
Q psy9736          77 LTDVV-TET--CMDEGQIAAVCREVLQALEFLH-SNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        77 L~~~i-~~~--~l~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++..+ ...  ..+......++.|+..++.|+| ..++.|+|+||+|.+++..+ ..++.|||  .+..+.......   
T Consensus       108 ~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~--~At~~~~~~g~~---  182 (601)
T KOG0590|consen  108 LFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFG--LATAYRNKNGAE---  182 (601)
T ss_pred             cccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCch--hhccccccCCcc---
Confidence            99988 433  5777889999999999999999 89999999999999999999 99999999  444222210000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       183 --------------------------------------------------------------------------------  182 (601)
T KOG0590|consen  183 --------------------------------------------------------------------------------  182 (601)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCC-CCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNG-ALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                       ......+| ++.|+|||...+..+. +..|.|+.|+++..+++|+. 
T Consensus       183 ---------------------------------~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~-  228 (601)
T KOG0590|consen  183 ---------------------------------RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGEL-  228 (601)
T ss_pred             ---------------------------------eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCC-
Confidence                                             01223367 8999999999885333 78899999999999999976 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                              |.................. ......+..++....+++++++..+|+.|.+.+++-.+||+..
T Consensus       229 --------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  229 --------PWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             --------CccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence                    4433222222222222221 2234456778889999999999999999999999999999987

>KOG1166|consensus

Probab=99.56  E-value=7.4e-15  Score=154.82  Aligned_cols=131  Identities=24%  Similarity=0.292  Sum_probs=103.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC---CCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK---HPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      +|.|+|++||.+.... +.+||+|+-+.....+   |.-=.+++.+|+   -+.|..+...+...+.-++|+||.+.|+|
T Consensus       706 ~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtl  781 (974)
T KOG1166|consen  706 IGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTL  781 (974)
T ss_pred             eccccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccH
Confidence            6999999999999888 8999999987665432   111122233333   24566676666666677899999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-------CCceEEeccch
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-------DGSVKLSKWNR  135 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-------~~~~~l~dfg~  135 (400)
                      .+++... .+++..++.++.|++..+++||..+|||+||||+|+++-.       ..-++|+|||+
T Consensus       782 ld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~  847 (974)
T KOG1166|consen  782 LDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR  847 (974)
T ss_pred             HHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence            9999853 7899999999999999999999999999999999999943       24589999993

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.54  E-value=1.6e-15  Score=141.25  Aligned_cols=133  Identities=22%  Similarity=0.263  Sum_probs=86.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCC----------CCcccccceeE-------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKH----------PNIVNYLDSYL-------   60 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h----------~niv~~~~~~~-------   60 (400)
                      ||.|.++.|+.+++..++...++|+.......   ..+++.+|.-....+.+          -.++-.++...       
T Consensus        20 i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~   99 (288)
T PF14531_consen   20 IGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPF   99 (288)
T ss_dssp             EEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SE
T ss_pred             cccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCcc
Confidence            57899999999999999999999887766532   34666666655544322          11222222221       


Q ss_pred             --eC---C-----EEEEEEeccCCCChHHHHhh----cC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe
Q psy9736          61 --VG---E-----ELWVVMEYLPGGSLTDVVTE----TC----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL  122 (400)
Q Consensus        61 --~~---~-----~~~lv~e~~~~~~L~~~i~~----~~----l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~  122 (400)
                        ..   .     ..+++|+-+ .++|.+++..    ..    +.......+..|++..+.+||..|++|+||+|+|+++
T Consensus       100 ~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll  178 (288)
T PF14531_consen  100 FERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLL  178 (288)
T ss_dssp             EEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE
T ss_pred             eecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEE
Confidence              11   1     236677777 5588887652    11    2233345566899999999999999999999999999


Q ss_pred             cCCCceEEeccc
Q psy9736         123 GLDGSVKLSKWN  134 (400)
Q Consensus       123 ~~~~~~~l~dfg  134 (400)
                      +.+|.+.|+||+
T Consensus       179 ~~~G~v~Lg~F~  190 (288)
T PF14531_consen  179 DQDGGVFLGDFS  190 (288)
T ss_dssp             -TTS-EEE--GG
T ss_pred             cCCCCEEEcChH
Confidence            999999999998

>KOG0195|consensus

Probab=99.52  E-value=4e-15  Score=133.53  Aligned_cols=215  Identities=18%  Similarity=0.270  Sum_probs=157.6

Q ss_pred             eEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc---CCCHHHHH
Q psy9736          18 FSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET---CMDEGQIA   92 (400)
Q Consensus        18 ~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~---~l~~~~~~   92 (400)
                      +..|+.|.++.++-.  ..+.|..|.-.|+.+.||||..+++.+....+..+++.|++.++|+..+..+   ..+..++.
T Consensus       213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav  292 (448)
T KOG0195|consen  213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAV  292 (448)
T ss_pred             CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHH
Confidence            345666666655432  2366888999999999999999999999999999999999999999999865   36777889


Q ss_pred             HHHHHHHHHHHHHHhC-Cee-cCCCCCCceEecCCCceEEe--ccchhhhhhhccccchhhccccccccccccceeeehh
Q psy9736          93 AVCREVLQALEFLHSN-QVI-HRDIKSDNILLGLDGSVKLS--KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIE  168 (400)
Q Consensus        93 ~i~~qi~~~l~~lH~~-~iv-H~dikp~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape  168 (400)
                      +++..+..|+.|||+- .++ --.+....+++|.+-+.+|.  |--      ++...-          ..          
T Consensus       293 ~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~k------fsfqe~----------gr----------  346 (448)
T KOG0195|consen  293 RFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTK------FSFQEV----------GR----------  346 (448)
T ss_pred             HHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccce------eeeecc----------cc----------
Confidence            9999999999999986 333 34577788888877554443  211      111000          01          


Q ss_pred             hccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCC
Q psy9736         169 SSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASP  248 (400)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (400)
                                                                                                      
T Consensus       347 --------------------------------------------------------------------------------  346 (448)
T KOG0195|consen  347 --------------------------------------------------------------------------------  346 (448)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC---cccCCCCccchhhhhcCCCCcccccccccCcchhhcH
Q psy9736         249 LSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN---QTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSC  325 (400)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~  325 (400)
                                            .=.|.||+||.+.+.+..   ...|+||++++++|+-+-++         ||.+ .++
T Consensus       347 ----------------------~y~pawmspealqrkped~n~raadmwsfaillwel~trev---------pfad-lsp  394 (448)
T KOG0195|consen  347 ----------------------AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREV---------PFAD-LSP  394 (448)
T ss_pred             ----------------------ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccc---------cccc-CCc
Confidence                                  123567777777765332   45677888887888777777         9998 888


Q ss_pred             HHHHHHHH-hCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         326 RQALYLIA-TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       326 ~~~~~~i~-~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      ++.-++|. .+-...+  |..++..+..|+.-|+..||.+||....+.
T Consensus       395 mecgmkialeglrv~i--ppgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  395 MECGMKIALEGLRVHI--PPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             hhhhhhhhhccccccC--CCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            88877774 4444444  334788999999999999999999987653

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.48  E-value=2.1e-13  Score=140.22  Aligned_cols=129  Identities=19%  Similarity=0.244  Sum_probs=99.7

Q ss_pred             CCcceEEEEEecCCCc--eeEEEEeccc-ccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRR--FFSKILSNPI-TLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~--~~~~va~K~~-~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|.++.||++....  ...++.+++. ...   .....+++.+|+.+++.++|++++....++......+++|||+++
T Consensus       341 iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g  420 (535)
T PRK09605        341 IGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGG  420 (535)
T ss_pred             eccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCC
Confidence            5899999999954322  2222222221 111   111235688999999999999998877666666678899999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      ++|.+++.       ....++.+++.++.+||+.+++|||+||+||++ .++.++++|||  .+.
T Consensus       421 ~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFG--la~  475 (535)
T PRK09605        421 KDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFG--LGK  475 (535)
T ss_pred             CcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCc--ccc
Confidence            99998875       356789999999999999999999999999999 67889999999  554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.46  E-value=2.4e-13  Score=121.56  Aligned_cols=124  Identities=20%  Similarity=0.207  Sum_probs=95.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc----------------------chHHHHHHHHHHHHhCCCCC--ccccc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ----------------------PKKELIINEILVMRENKHPN--IVNYL   56 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~----------------------~~~~~~~~Ei~~l~~l~h~n--iv~~~   56 (400)
                      ||.|+++.||.+... .+..|++|.+.....                      .....+.+|+.++..+.|.+  +...+
T Consensus        23 i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~  101 (198)
T cd05144          23 IGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPI  101 (198)
T ss_pred             cccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCcee
Confidence            689999999988764 567788886543221                      01123568899999887774  33333


Q ss_pred             ceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          57 DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        57 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +    ....+++|||++|++|......     .....++.+++.++.++|+.+++|+||+|+||+++.++.++|+|||
T Consensus       102 ~----~~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg  170 (198)
T cd05144         102 D----WNRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWP  170 (198)
T ss_pred             e----cCCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECC
Confidence            2    2345899999999888765431     3456788999999999999999999999999999999999999999

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.46  E-value=4.9e-13  Score=123.07  Aligned_cols=129  Identities=18%  Similarity=0.221  Sum_probs=93.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEe------cccccc---CcchHHHHHHHHHHHHhCCCCCc--ccccceeEeC-C---EE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILS------NPITLA---QQPKKELIINEILVMRENKHPNI--VNYLDSYLVG-E---EL   65 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~------K~~~~~---~~~~~~~~~~Ei~~l~~l~h~ni--v~~~~~~~~~-~---~~   65 (400)
                      +|+|+++.|... +.+++.+...      |.+...   ......++.+|+.++..+.|.++  +..+++...+ +   ..
T Consensus        43 ~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~  121 (239)
T PRK01723         43 KGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRA  121 (239)
T ss_pred             CCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceee
Confidence            477788877665 4444443332      222111   11234568899999999988875  5556554332 2   23


Q ss_pred             EEEEeccCC-CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          66 WVVMEYLPG-GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        66 ~lv~e~~~~-~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ++|+|+++| .+|.+++....+++..    +.+++.++.+||+.||+|+||||+||+++.++.++|+|||
T Consensus       122 ~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg  187 (239)
T PRK01723        122 DILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFD  187 (239)
T ss_pred             eEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECC
Confidence            599999987 6899888776666543    5688999999999999999999999999999999999999

>KOG0600|consensus

Probab=99.43  E-value=6.3e-14  Score=135.43  Aligned_cols=166  Identities=22%  Similarity=0.223  Sum_probs=137.2

Q ss_pred             cccceeeehhhccCCCCchH-------------HHHHHHHHHhhcCCCchhhhhhhhccc--cccceeeeeccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKE-------------LIINEILVMRENKHPNIVNYLDSYLVG--EELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~  223 (400)
                      +++.+|.|.+..+|+-+|.+             -.++||..++.+.|+||+++.+.....  ..+|.+.+.++..|+|..
T Consensus       129 Tyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl  208 (560)
T KOG0600|consen  129 TYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLL  208 (560)
T ss_pred             chhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhh
Confidence            46778999999999777643             349999999999999999999766665  789999999999999988


Q ss_pred             ccccCCCCCCCCc--------------------ccccccc---CCCCCCCCCCCCCCCCCCCCC-CCCCccCCCCccCCC
Q psy9736         224 LWYTKPIEEPSNT--------------------TDEKTST---SSASPLSTPPLSLIQPPPPST-PPRSTLNGALTSLPP  279 (400)
Q Consensus       224 ~~~~~~~~~~~~~--------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gt~~y~aP  279 (400)
                      .-....+.+++++                    +|++.++   +..+.+|++|||++.-...+. .+.+.++-|++|+||
T Consensus       209 ~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpP  288 (560)
T KOG0600|consen  209 SSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPP  288 (560)
T ss_pred             cCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccCh
Confidence            8777777777733                    6888877   688999999999999555444 468889999999999


Q ss_pred             cceecC-CCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHh
Q psy9736         280 PVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIAT  334 (400)
Q Consensus       280 E~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~  334 (400)
                      |.+++. .|+...|.||+|||+-||+.|.          |++.+.+..+++..|.+
T Consensus       289 ELLLG~t~Yg~aVDlWS~GCIl~El~~gk----------PI~~G~tEveQl~kIfk  334 (560)
T KOG0600|consen  289 ELLLGATSYGTAVDLWSVGCILAELFLGK----------PILQGRTEVEQLHKIFK  334 (560)
T ss_pred             HHhcCCcccccceeehhhhHHHHHHHcCC----------CCcCCccHHHHHHHHHH
Confidence            999985 4457789999999999999997          66666777888877744

>KOG1033|consensus

Probab=99.42  E-value=3.5e-14  Score=138.37  Aligned_cols=183  Identities=20%  Similarity=0.244  Sum_probs=134.2

Q ss_pred             EEEEEEeccCCCChHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          64 ELWVVMEYLPGGSLTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      ..++.|++|.-.+|.+.+.++    .-+....+.++.|+..|+.|   ++.+|+|+||.||++..+..++|.|||+ ...
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl-~ts  405 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGL-VTS  405 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhh-eee
Confidence            578999999999999999743    35667788899999999999   8999999999999999999999999992 111


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                           .....                                                                      
T Consensus       406 -----~~~~~----------------------------------------------------------------------  410 (516)
T KOG1033|consen  406 -----QDKDE----------------------------------------------------------------------  410 (516)
T ss_pred             -----cccCC----------------------------------------------------------------------
Confidence                 11110                                                                      


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                      +                                       ....-..++.-.||..||+||.|.+..|..+.|+|++|.+
T Consensus       411 ~---------------------------------------~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGli  451 (516)
T KOG1033|consen  411 T---------------------------------------VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLI  451 (516)
T ss_pred             c---------------------------------------ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHH
Confidence            0                                       0001123556689999999999999989899999999999


Q ss_pred             hhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       300 ~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                      ++|++.            +|.........+..+-.+..|.. ...+.+ .-.+|+.+||...|.+||++.+..-|+|++
T Consensus       452 l~EL~~------------~f~T~~er~~t~~d~r~g~ip~~-~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  452 LAELLI------------QFSTQFERIATLTDIRDGIIPPE-FLQDYP-EEYTLLQQLLSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             HHHHHH------------HhccHHHHHHhhhhhhcCCCChH-HhhcCc-HHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence            999965            23332333444444444433311 111122 346899999999999999999988888864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.36  E-value=3.1e-12  Score=107.81  Aligned_cols=124  Identities=17%  Similarity=0.243  Sum_probs=102.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC--CCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH--PNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      +|.|.+..+|.+....  ..+++|.......  ...+.+|+.+++.+++  .++.+++.++..++..++++||+++..+.
T Consensus         6 i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           6 LKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             cccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            5788888898888755  5677777654332  4568899999999976  48888888887777899999999887775


Q ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCCCceEecCCCceEEeccc
Q psy9736          79 DVVTETCMDEGQIAAVCREVLQALEFLHSN---QVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        79 ~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .+      +......++.++..++..+|..   +++|+|++|.||+++..+.+++.|||
T Consensus        82 ~~------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~  134 (155)
T cd05120          82 EV------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWE  134 (155)
T ss_pred             cC------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecc
Confidence            43      4456677889999999999985   69999999999999998999999999

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.34  E-value=5.6e-12  Score=111.36  Aligned_cols=127  Identities=15%  Similarity=0.200  Sum_probs=88.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch--HHH----------------------HHHHHHHHHhCCCCC--ccc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK--KEL----------------------IINEILVMRENKHPN--IVN   54 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~--~~~----------------------~~~Ei~~l~~l~h~n--iv~   54 (400)
                      ||+|+++.||.+.+. ....|++|.........  ...                      ...|...+..+.+..  +.+
T Consensus         5 lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~   83 (187)
T cd05119           5 IGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPK   83 (187)
T ss_pred             cccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence            689999999999876 66788888765432111  111                      134555565553332  333


Q ss_pred             ccceeEeCCEEEEEEeccCCCChHH-HHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEec
Q psy9736          55 YLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        55 ~~~~~~~~~~~~lv~e~~~~~~L~~-~i~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      .++.    ...+++|||++++++.. .+...... .....++.+++.++.++|. .+++|+|+||+||+++ ++.++++|
T Consensus        84 ~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liD  157 (187)
T cd05119          84 PIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIID  157 (187)
T ss_pred             eEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEE
Confidence            3332    23589999998844321 12211111 6678999999999999999 9999999999999999 89999999


Q ss_pred             cc
Q psy9736         133 WN  134 (400)
Q Consensus       133 fg  134 (400)
                      ||
T Consensus       158 fg  159 (187)
T cd05119         158 VP  159 (187)
T ss_pred             Cc
Confidence            99

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0663|consensus

Probab=99.20  E-value=3.5e-12  Score=117.82  Aligned_cols=214  Identities=21%  Similarity=0.167  Sum_probs=156.5

Q ss_pred             ccceeeehhhccCCCCchH-------------HHHHHHHHHhhcCCCchhhhhhhh--ccccccceeeeecccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKE-------------LIINEILVMRENKHPNIVNYLDSY--LVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      ++.+|+|-.--++.-.|.+             -.++||-.+..++|+|||+..++.  ..-++++.+|+.+...|.+.-.
T Consensus        89 yGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d  168 (419)
T KOG0663|consen   89 YGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLME  168 (419)
T ss_pred             ceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHH
Confidence            4556777766655444432             238999999999999999887443  3445688889998877776543


Q ss_pred             cccCCCCCCC--------------------Ccccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcc
Q psy9736         225 WYTKPIEEPS--------------------NTTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPV  281 (400)
Q Consensus       225 ~~~~~~~~~~--------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  281 (400)
                      -...++...+                    ..+|.++++   +..+.+|++|||+++..-+...+.+..+-|.+|+|||.
T Consensus       169 ~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPEL  248 (419)
T KOG0663|consen  169 TMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPEL  248 (419)
T ss_pred             hccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHH
Confidence            3332332222                    336888877   68899999999999999999999999999999999999


Q ss_pred             eecCCCC-cccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhC-------CCCCcc------------
Q psy9736         282 VLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN-------KKPEIK------------  341 (400)
Q Consensus       282 ~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~-------~~~~~~------------  341 (400)
                      +.+.+-+ ...|+||+|||+-||+.+.          |...+.+..+++.+|.+.       .+|.+.            
T Consensus       249 LLG~~tyst~iDMWSvGCI~aE~l~~k----------Plf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~  318 (419)
T KOG0663|consen  249 LLGAKTYSTAVDMWSVGCIFAELLTQK----------PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSE  318 (419)
T ss_pred             hcCCcccCcchhhhhHHHHHHHHHhcC----------CCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCC
Confidence            9997643 5567777777777777775          666666666666666432       011111            


Q ss_pred             ----------hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         342 ----------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       342 ----------~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                                ....++....||+..+|.+||.+|.||.|+|+|.||.+.+.+
T Consensus       319 ~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p  370 (419)
T KOG0663|consen  319 HPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP  370 (419)
T ss_pred             CCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence                      001155788999999999999999999999999999985553

>KOG1266|consensus

Probab=99.18  E-value=1.3e-11  Score=113.95  Aligned_cols=92  Identities=23%  Similarity=0.460  Sum_probs=79.2

Q ss_pred             HHHHHhCCCCCcccccceeEeCC-----EEEEEEeccCCCChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC--
Q psy9736          41 ILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSN--  108 (400)
Q Consensus        41 i~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~--  108 (400)
                      ...|-++-|.||++++.++.+.+     +..+++||+..|++..++++     ..+.....++++.||+.||.|||+.  
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            45566678999999998887543     68899999999999999974     2578889999999999999999987  


Q ss_pred             CeecCCCCCCceEecCCCceEEec
Q psy9736         109 QVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      .++|+++..+.|++..+|.+++.-
T Consensus       198 piihgnlTc~tifiq~ngLIkig~  221 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGS  221 (458)
T ss_pred             ccccCCcchhheeecCCceEEecc
Confidence            899999999999999888887653

>KOG0601|consensus

Probab=99.09  E-value=1.4e-10  Score=115.26  Aligned_cols=167  Identities=22%  Similarity=0.226  Sum_probs=122.6

Q ss_pred             CCc--ceEEEEEecCC--CceeEEEEeccccccCc--chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKR--GVTIDRFSSDD--RRFFSKILSNPITLAQQ--PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~--G~~~~v~~~~~--~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|.  |+++.+|.++.  .....++++|+-+....  ....+=.+|+.--+++ .|+|.++.+..+...+..++-+|+| 
T Consensus       122 ~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~-  200 (524)
T KOG0601|consen  122 TGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC-  200 (524)
T ss_pred             cccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeeccc-
Confidence            467  89999999988  88888888888433322  2333335677777777 5999999999999999999999999 


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHH----HHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQ----ALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~----~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +.++..+....  -+++...+..+.+...    |+.++|..+++|-|++|.||+...+ ..++++|||  ....+....-
T Consensus       201 ~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~--~v~~i~~~~~  278 (524)
T KOG0601|consen  201 GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG--LVSKISDGNF  278 (524)
T ss_pred             cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc--eeEEccCCcc
Confidence            56777766532  3788888888888888    9999999999999999999999999 889999999  3333333221


Q ss_pred             hhhccccccccccccceeeehhhccC
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTG  172 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~  172 (400)
                      ...-.  ......+..-|++||+..+
T Consensus       279 ~~~~~--~~~r~~~~~~Y~~ke~~~~  302 (524)
T KOG0601|consen  279 SSVFK--VSKRPEGDCIYAAKELLNG  302 (524)
T ss_pred             cccee--eeecCCCCceEeChhhhcc
Confidence            11000  0123345556777776665

>KOG0659|consensus

Probab=99.06  E-value=4.4e-11  Score=107.46  Aligned_cols=165  Identities=18%  Similarity=0.136  Sum_probs=117.4

Q ss_pred             cceeeehhhccCCCCch-------------HHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         161 GTVYTAIESSTGMEPKK-------------ELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +..|.|-..-+|+..|-             ...++||..+++++|+|++++.|.+...+.+--+.+.+..-|-.-..-..
T Consensus        16 gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~   95 (318)
T KOG0659|consen   16 GVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKN   95 (318)
T ss_pred             EEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccccHHHHhcccc
Confidence            34566666666665542             24599999999999999999999999998776666666543332222222


Q ss_pred             CCCCCCC--------------------Ccccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec
Q psy9736         228 KPIEEPS--------------------NTTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD  284 (400)
Q Consensus       228 ~~~~~~~--------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  284 (400)
                      ......+                    -.+|.++.+   ++.+++|.+|||++...........+.+-|.+|+|||.+.+
T Consensus        96 i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfG  175 (318)
T KOG0659|consen   96 IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFG  175 (318)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhcc
Confidence            2233333                    226777755   78999999999999877766666666689999999999998


Q ss_pred             CCCC-cccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhC
Q psy9736         285 KNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN  335 (400)
Q Consensus       285 ~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~  335 (400)
                      ++.+ .-.|+||+|||+-||+-+.          ||..+.+..+++..|.+-
T Consensus       176 sr~Yg~~VDmWavGCI~AELllr~----------P~fpG~sDidQL~~If~~  217 (318)
T KOG0659|consen  176 SRQYGTGVDMWAVGCIFAELLLRV----------PFFPGDSDIDQLSKIFRA  217 (318)
T ss_pred             chhcCCcchhhhHHHHHHHHHccC----------CCCCCCchHHHHHHHHHH
Confidence            7633 4456666666666665554          999888888888887544

>KOG0593|consensus

Probab=99.03  E-value=7.6e-11  Score=107.78  Aligned_cols=193  Identities=20%  Similarity=0.284  Sum_probs=155.3

Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC--------------------Cc
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS--------------------NT  236 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------------~~  236 (400)
                      .++..+||--++.++|+|+|++++++-+...++-+.+.|+.-+....-......+...                    ..
T Consensus        45 kKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IH  124 (396)
T KOG0593|consen   45 KKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIH  124 (396)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeec
Confidence            3467999999999999999999999999999999999998766654333322222211                    44


Q ss_pred             ccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         237 TDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       237 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                      +|+++-+   +..+.+|.||||-++.......-++..+-|.+|+|||.+.+ ..|+...|+|+.||++-||++|.     
T Consensus       125 RDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~-----  199 (396)
T KOG0593|consen  125 RDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE-----  199 (396)
T ss_pred             ccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC-----
Confidence            7888855   67799999999998888877778888999999999999998 67778899999999999999998     


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCC---------------------CCcchh-------hhhcHHHHHHHHHhhhhhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKK---------------------PEIKEK-------EKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~---------------------~~~~~~-------~~~s~~~~dli~~~L~~dP~~  364 (400)
                           |...+.+..++++.|.+.-.                     |..+.+       .+++..+.||+.+||+.||++
T Consensus       200 -----pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~  274 (396)
T KOG0593|consen  200 -----PLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDD  274 (396)
T ss_pred             -----cCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccc
Confidence                 77777888888888854311                     111111       235668999999999999999


Q ss_pred             hhcHHHHhcCccccc
Q psy9736         365 RASASLLLKHPFLKI  379 (400)
Q Consensus       365 R~s~~~~l~hp~~~~  379 (400)
                      |++.+++|.||||+.
T Consensus       275 R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  275 RLSCEQLLHHPYFDG  289 (396)
T ss_pred             cccHHHHhcChHHHH
Confidence            999999999999964

>KOG0606|consensus

Probab=99.02  E-value=1.5e-10  Score=121.10  Aligned_cols=247  Identities=22%  Similarity=0.258  Sum_probs=173.7

Q ss_pred             HHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Q psy9736          37 IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDI  115 (400)
Q Consensus        37 ~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~di  115 (400)
                      +..+-.++-...++.++...-.+......+++++|+.+++|...+.+. ....+-.+.++..+..+.++||...++|+|+
T Consensus       851 ~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~  930 (1205)
T KOG0606|consen  851 IRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDL  930 (1205)
T ss_pred             cCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccc
Confidence            334444444445666676665566667889999999999998888754 4677777888889999999999998999999


Q ss_pred             CCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCch
Q psy9736         116 KSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNI  195 (400)
Q Consensus       116 kp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
                      +|.|++...+|...+++||  .......-....         ..+     .++.                          
T Consensus       931 ~p~~~l~~~~gh~~l~~~~--t~~~vg~~~p~~---------~~s-----g~~~--------------------------  968 (1205)
T KOG0606|consen  931 KPDSLLIAYDGHRPLTDFG--TLSKVGLIPPTT---------DLS-----GPSS--------------------------  968 (1205)
T ss_pred             cccchhhcccCCcccCccc--cccccccccCcC---------Ccc-----cccc--------------------------
Confidence            9999999999999999998  222111000000         000     0000                          


Q ss_pred             hhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCc
Q psy9736         196 VNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALT  275 (400)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  275 (400)
                                              .+.+.+....                        ........+.....-...||+.
T Consensus       969 ------------------------~~~~~~~~~~------------------------~~~~~l~~~~~~~~~~~~~t~~ 1000 (1205)
T KOG0606|consen  969 ------------------------SGTPRRLSRS------------------------ERRPQLSADEARRKHAVVGTPD 1000 (1205)
T ss_pred             ------------------------cCcccccccc------------------------ccccccccchhhccccccCCCc
Confidence                                    0000000000                        0000000001112334578999


Q ss_pred             cCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHH
Q psy9736         276 SLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLD  355 (400)
Q Consensus       276 y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~  355 (400)
                      |.+||...+.......|.|+.|..++|.++|-          |......+.+.+..|.+...+-...+...+..+++++.
T Consensus      1001 ~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~----------pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen 1001 YLAPEILLGRRHGSAADWWSSGVCLFEVLTGI----------PPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLIN 1070 (1205)
T ss_pred             ccCCcccccccCCCcchhhhhhhhhhhhhcCC----------CCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhh
Confidence            99999999988888899999999999999996          44444888999988888876655556678889999999


Q ss_pred             HhhhhhhhhhhcHH---HHhcCccccccCCC
Q psy9736         356 QCLEEEVETRASAS---LLLKHPFLKIARPL  383 (400)
Q Consensus       356 ~~L~~dP~~R~s~~---~~l~hp~~~~~~~~  383 (400)
                      .+|..+|.+|..+.   ++-.||||+....-
T Consensus      1071 ~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1071 RLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             hhhccCchhccCcccccccccCCccCCCCcc
Confidence            99999999999998   89999999975543

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.99  E-value=4.1e-10  Score=114.25  Aligned_cols=133  Identities=15%  Similarity=0.210  Sum_probs=83.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc----------------------------------hHHHHHHHHHHH--
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP----------------------------------KKELIINEILVM--   44 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~----------------------------------~~~~~~~Ei~~l--   44 (400)
                      +|+|+++.|+.++-..++..||+|+.......                                  ..+.+.+|++..  
T Consensus       127 lasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~E  206 (537)
T PRK04750        127 LASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMRE  206 (537)
T ss_pred             hcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHH
Confidence            58999999999977665677888877543110                                  012233333333  


Q ss_pred             ----HhC----CCCCcccccceeEe-CCEEEEEEeccCCCChHHH--HhhcC-----CCHHHHHHHHHHHHHHHHHHHhC
Q psy9736          45 ----REN----KHPNIVNYLDSYLV-GEELWVVMEYLPGGSLTDV--VTETC-----MDEGQIAAVCREVLQALEFLHSN  108 (400)
Q Consensus        45 ----~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~--i~~~~-----l~~~~~~~i~~qi~~~l~~lH~~  108 (400)
                          .++    .+.+.+.+-.++.+ ....++||||+.|+.+.+.  +....     +.+..+..++.|++       ..
T Consensus       207 a~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~  279 (537)
T PRK04750        207 AANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RD  279 (537)
T ss_pred             HHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hC
Confidence                332    12222333233221 2345699999999999764  22222     33444445555543       47


Q ss_pred             CeecCCCCCCceEecCCC----ceEEeccchhhhhhhc
Q psy9736         109 QVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLY  142 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~  142 (400)
                      |++|+|+||.||+++.+|    .+++.|||  +...+.
T Consensus       280 GffHaDpHPGNIlv~~~g~~~~~i~llDFG--ivg~l~  315 (537)
T PRK04750        280 GFFHADMHPGNIFVSYDPPENPRYIALDFG--IVGSLN  315 (537)
T ss_pred             CeeeCCCChHHeEEecCCCCCCeEEEEecc--eEEECC
Confidence            999999999999999888    99999999  544443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.99  E-value=1.1e-09  Score=109.51  Aligned_cols=136  Identities=16%  Similarity=0.148  Sum_probs=88.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchH----------------------------------------HHHHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKK----------------------------------------ELIINE   40 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~----------------------------------------~~~~~E   40 (400)
                      +|.|+++.||+++-. .+.+||+|+.........                                        -.+.+|
T Consensus       125 lasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~E  203 (437)
T TIGR01982       125 LAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRRE  203 (437)
T ss_pred             eeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHH
Confidence            578999999998642 456788887654321100                                        013345


Q ss_pred             HHHHHhC----CCCCcccccceeEe-CCEEEEEEeccCCCChHHHHhhc--CCCHHHHHHHHHHHHH-HHHHHHhCCeec
Q psy9736          41 ILVMREN----KHPNIVNYLDSYLV-GEELWVVMEYLPGGSLTDVVTET--CMDEGQIAAVCREVLQ-ALEFLHSNQVIH  112 (400)
Q Consensus        41 i~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~-~l~~lH~~~ivH  112 (400)
                      ...+.++    ++.+-+.+..++.. ....++||||++|.+|.+.....  ...   ...++..++. .+..+|..|++|
T Consensus       204 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H  280 (437)
T TIGR01982       204 AANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFH  280 (437)
T ss_pred             HHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCcee
Confidence            5555444    23333333333321 23468999999999998876432  222   3345555554 467789999999


Q ss_pred             CCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736         113 RDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus       113 ~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      +|++|.||+++.++.++++|||  ++..+.
T Consensus       281 ~D~hPgNilv~~~g~i~liDfG--~~~~l~  308 (437)
T TIGR01982       281 ADLHPGNIFVLKDGKIIALDFG--IVGRLS  308 (437)
T ss_pred             CCCCcccEEECCCCcEEEEeCC--CeeECC
Confidence            9999999999999999999999  544343

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0594|consensus

Probab=98.96  E-value=1.9e-10  Score=107.49  Aligned_cols=218  Identities=22%  Similarity=0.173  Sum_probs=154.4

Q ss_pred             cccceeeehhhccCCCCc-------------hHHHHHHHHHHhhcCCCc-hhhhhhhhcccc------ccceeeeecccc
Q psy9736         159 ASGTVYTAIESSTGMEPK-------------KELIINEILVMRENKHPN-IVNYLDSYLVGE------ELWNIVNYLDSY  218 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~  218 (400)
                      +++..|.|-+..+|+-++             +.-.++|+..++.++|+| +|.+.++....+      .++-+.+.++.-
T Consensus        23 tyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~D  102 (323)
T KOG0594|consen   23 TYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRD  102 (323)
T ss_pred             CceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeeccc
Confidence            345567777777774443             234599999999999999 999998887777      444445554433


Q ss_pred             cccccccccC---CCCC--------------------CCCcccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCC
Q psy9736         219 LVGEELWYTK---PIEE--------------------PSNTTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNG  272 (400)
Q Consensus       219 l~~~~~~~~~---~~~~--------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  272 (400)
                      |...-.-...   ..+.                    ....+|.++.|   ++.+.+|.+|||.+....-.....++-++
T Consensus       103 L~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evv  182 (323)
T KOG0594|consen  103 LKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVV  182 (323)
T ss_pred             HHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEE
Confidence            3321111110   1111                    11346888866   67899999999999987777777899999


Q ss_pred             CCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhC-------CCCCcc---
Q psy9736         273 ALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN-------KKPEIK---  341 (400)
Q Consensus       273 t~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~-------~~~~~~---  341 (400)
                      |.+|+|||++.++. |....|+||+||++.||+++.          |.+.+++..+++..|-+-       .+|.+.   
T Consensus       183 TlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~----------~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~  252 (323)
T KOG0594|consen  183 TLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR----------PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLP  252 (323)
T ss_pred             EeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC----------CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccc
Confidence            99999999999984 447778888888888888865          666667777777777432       011100   


Q ss_pred             -------h---h-------hhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCc
Q psy9736         342 -------E---K-------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL  386 (400)
Q Consensus       342 -------~---~-------~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l  386 (400)
                             .   +       .+.+..+.|++.+||+++|++|.|+..+|.||||.....+.+.
T Consensus       253 ~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~  314 (323)
T KOG0594|consen  253 DYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQ  314 (323)
T ss_pred             cccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhh
Confidence                   0   1       1122478999999999999999999999999999987665443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.95  E-value=2.1e-09  Score=93.11  Aligned_cols=121  Identities=20%  Similarity=0.193  Sum_probs=85.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcc-cccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIV-NYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ++.|....+|..+..  ..++++|....... ....+.+|+.+++.+.+.+++ +++...  ....++|||+++|.++..
T Consensus         6 l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           6 LKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             cCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            456777777776543  45788887643321 223457899999988655544 444433  233579999999987764


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe-----ecCCCCCCceEecCCCceEEeccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQV-----IHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-----vH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .       .......+.++..++..||..++     +|+|++|.||+++ ++.++++|||
T Consensus        81 ~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~  132 (170)
T cd05151          81 E-------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE  132 (170)
T ss_pred             c-------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence            3       01123456788999999999874     9999999999998 6789999999

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0660|consensus

Probab=98.90  E-value=1.1e-09  Score=102.62  Aligned_cols=149  Identities=14%  Similarity=0.085  Sum_probs=107.9

Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhcc-----ccccceeeeecccccccccccc-------------------cCCCCC
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLV-----GEELWNIVNYLDSYLVGEELWY-------------------TKPIEE  232 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~-------------------~~~~~~  232 (400)
                      -+.+.+|+..++.++|+|++...+....     -+|++.+.+++...|......+                   .--...
T Consensus        65 akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA  144 (359)
T KOG0660|consen   65 AKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA  144 (359)
T ss_pred             HHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc
Confidence            3467999999999999999999877666     6678877777644433211110                   111222


Q ss_pred             CCCcccccccc---CCCCCCCCCCCCCCCCCCCC--CCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCC
Q psy9736         233 PSNTTDEKTST---SSASPLSTPPLSLIQPPPPS--TPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       233 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                      ....+|.++++   ...+.+|++|||+++.....  ...-+..+-|.+|+|||++.. ..|+...|+||+|||+-|||+|
T Consensus       145 nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~g  224 (359)
T KOG0660|consen  145 NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTG  224 (359)
T ss_pred             cccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcC
Confidence            33557888877   46799999999999877653  233456688999999998876 4555788999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhC
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATN  335 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~  335 (400)
                      .          |.+.+.+...++..|+.-
T Consensus       225 k----------plFpG~d~v~Ql~lI~~~  243 (359)
T KOG0660|consen  225 K----------PLFPGKDYVHQLQLILEL  243 (359)
T ss_pred             C----------CCCCCCchHHHHHHHHHh
Confidence            7          555557777777777655

>KOG1243|consensus

Probab=98.85  E-value=2e-08  Score=101.23  Aligned_cols=116  Identities=22%  Similarity=0.331  Sum_probs=94.9

Q ss_pred             CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHH
Q psy9736          15 RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV   94 (400)
Q Consensus        15 ~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i   94 (400)
                      +.++..|.+.+.+.......+...+.+..|++++||||++|++.+..++..|+|+|-+  ..|...+++  +....+..-
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~--l~~~~v~~G  109 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE--LGKEEVCLG  109 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH--hHHHHHHHH
Confidence            3344455555554444433455778899999999999999999999999999999988  356666665  347778888


Q ss_pred             HHHHHHHHHHHH-hCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          95 CREVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        95 ~~qi~~~l~~lH-~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +.||+.||-||| +.+++|+++.-.-++++..|.-+|++|.
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle  150 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLE  150 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeE
Confidence            999999999998 5699999999999999999999999987

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.76  E-value=8e-08  Score=85.20  Aligned_cols=91  Identities=14%  Similarity=0.261  Sum_probs=70.2

Q ss_pred             HHHHHHHhCCC--CCcccccceeEeCCEEEEEEeccCCCChH-HHHhhcCCCHHHHHHHHHHHHHHHHHH-HhCCeecCC
Q psy9736          39 NEILVMRENKH--PNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFL-HSNQVIHRD  114 (400)
Q Consensus        39 ~Ei~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L~-~~i~~~~l~~~~~~~i~~qi~~~l~~l-H~~~ivH~d  114 (400)
                      +|+..|+++..  -++...+++    ...++||||+.+..+. ..+++..++......+..+++.++..+ |..+++|+|
T Consensus        75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGD  150 (197)
T cd05146          75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHAD  150 (197)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            89999999853  355555543    3468899999664332 234444456667778889999999988 899999999


Q ss_pred             CCCCceEecCCCceEEeccc
Q psy9736         115 IKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       115 ikp~nil~~~~~~~~l~dfg  134 (400)
                      +++.||++. ++.+.++|||
T Consensus       151 Ls~~NIL~~-~~~v~iIDF~  169 (197)
T cd05146         151 LSEYNMLWH-DGKVWFIDVS  169 (197)
T ss_pred             CCHHHEEEE-CCcEEEEECC
Confidence            999999996 5779999999

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.64  E-value=1.4e-07  Score=85.23  Aligned_cols=133  Identities=18%  Similarity=0.210  Sum_probs=89.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCC--CcccccceeEeC---CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHP--NIVNYLDSYLVG---EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~--niv~~~~~~~~~---~~~~lv~e~~~~   74 (400)
                      ++.|....+|+.+... +..+++|....... .....+.+|..+++.+.+.  ++.+++.+....   +..+++|||++|
T Consensus         6 l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G   84 (223)
T cd05154           6 LSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDG   84 (223)
T ss_pred             cCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCC
Confidence            4667777777765432 34667776543322 1345678999999998654  356666665543   356899999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------------
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHS-----------------------------------------------  107 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~-----------------------------------------------  107 (400)
                      .++.+.+....+++.....++.+++..+..||+                                               
T Consensus        85 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (223)
T cd05154          85 RVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWL  164 (223)
T ss_pred             EecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Confidence            888765432234555555556666666655552                                               


Q ss_pred             ---------CCeecCCCCCCceEecC--CCceEEeccc
Q psy9736         108 ---------NQVIHRDIKSDNILLGL--DGSVKLSKWN  134 (400)
Q Consensus       108 ---------~~ivH~dikp~nil~~~--~~~~~l~dfg  134 (400)
                               ..++|+|+++.||+++.  .+.+.++||+
T Consensus       165 ~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e  202 (223)
T cd05154         165 EAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWE  202 (223)
T ss_pred             HhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecc
Confidence                     24589999999999988  5668899998

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0601|consensus

Probab=98.62  E-value=2.9e-08  Score=98.92  Aligned_cols=97  Identities=25%  Similarity=0.334  Sum_probs=82.3

Q ss_pred             HHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Q psy9736          38 INEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDI  115 (400)
Q Consensus        38 ~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~di  115 (400)
                      ..|+.+...+ .|.++++++..|....+.++-.|||.++++...+.- ..+.+...+.+..|++.++.++|+..++|+|+
T Consensus       313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~  392 (524)
T KOG0601|consen  313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDV  392 (524)
T ss_pred             hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccc
Confidence            5677777666 688999998888777778899999999888765532 25788889999999999999999999999999


Q ss_pred             CCCceEecCC-CceEEeccc
Q psy9736         116 KSDNILLGLD-GSVKLSKWN  134 (400)
Q Consensus       116 kp~nil~~~~-~~~~l~dfg  134 (400)
                      +|+||++..+ +..++.|||
T Consensus       393 ~psni~i~~~~~~~~~~~~~  412 (524)
T KOG0601|consen  393 KPSNILISNDGFFSKLGDFG  412 (524)
T ss_pred             cccceeeccchhhhhccccc
Confidence            9999999886 778888888

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.60  E-value=5.4e-07  Score=77.92  Aligned_cols=96  Identities=21%  Similarity=0.316  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Q psy9736          35 ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRD  114 (400)
Q Consensus        35 ~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~d  114 (400)
                      ++-.+|..++.+++--.|..-+=++.+.....++|||.+|..|.+.+...      ...++..+-.-+.-||..||+|+|
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~------~~~~~r~vG~~vg~lH~~givHGD  117 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA------RPDLLREVGRLVGKLHKAGIVHGD  117 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc------chHHHHHHHHHHHHHHhcCeecCC
Confidence            55668899998875443333222333344567899999998888888764      245567777778889999999999


Q ss_pred             CCCCceEecCCCceEEeccchhhhh
Q psy9736         115 IKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus       115 ikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      +.++||++...+ +.++|||  ++.
T Consensus       118 LTtsNiIl~~~~-i~~IDfG--Lg~  139 (204)
T COG3642         118 LTTSNIILSGGR-IYFIDFG--LGE  139 (204)
T ss_pred             CccceEEEeCCc-EEEEECC--ccc
Confidence            999999997665 9999999  444

>KOG0666|consensus

Probab=98.55  E-value=3.5e-08  Score=90.89  Aligned_cols=203  Identities=16%  Similarity=0.192  Sum_probs=137.3

Q ss_pred             HHHHHHHHHhhcCCCchhhhhhhhcc-ccccceeeeecccccccccccccCCCCCCC-----------------------
Q psy9736         179 LIINEILVMRENKHPNIVNYLDSYLV-GEELWNIVNYLDSYLVGEELWYTKPIEEPS-----------------------  234 (400)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------------  234 (400)
                      ...+|+..+++++|+|++.+..+... ...+|.+...-...|-..-.|...+.....                       
T Consensus        73 SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW  152 (438)
T KOG0666|consen   73 SACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW  152 (438)
T ss_pred             HHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh
Confidence            35899999999999999999998888 777888877776666555555444333222                       


Q ss_pred             -Ccccccccc---CCC----CCCCCCCCCCCCCCCCCC---CCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhh
Q psy9736         235 -NTTDEKTST---SSA----SPLSTPPLSLIQPPPPST---PPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILE  302 (400)
Q Consensus       235 -~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~  302 (400)
                       ..+|.++++   ..+    +.+|++|+|..+-.....   .+....+-|.+|+|||.+.+.+.+ ...|.|+.|||+-|
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE  232 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE  232 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence             225777766   233    999999999877544433   455666779999999999997655 56788888888888


Q ss_pred             hcCCCCccccccc----ccCcchhhcHHHHHHHHHhC----CCCCcc---hh------------hh------------hc
Q psy9736         303 FLGPHKWSFQPHF----LIPYLFILSCRQALYLIATN----KKPEIK---EK------------EK------------LS  347 (400)
Q Consensus       303 ~~~gd~ws~g~~~----~~P~~~~~~~~~~~~~i~~~----~~~~~~---~~------------~~------------~s  347 (400)
                      ||+..=-=.|--.    ..||..  +.+...++++..    .+|.+.   +.            .+            -+
T Consensus       233 lLtl~PlF~g~E~k~~~~~Pfq~--dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~  310 (438)
T KOG0666|consen  233 LLTLEPLFKGREEKIKTKNPFQH--DQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD  310 (438)
T ss_pred             HHccCccccchhhhcccCCCchH--HHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence            8776521111111    334443  233444444322    111111   00            00            12


Q ss_pred             HHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         348 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       348 ~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      ++..+|+.+||++||-+|+|++++|+|+||.+...+
T Consensus       311 ~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  311 PSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             chHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            368899999999999999999999999999986443

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.54  E-value=1.4e-06  Score=78.34  Aligned_cols=101  Identities=20%  Similarity=0.276  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHHHhCCCCCc--ccccceeEeC----CEEEEEEeccCCC-ChHHHHhh-cCCCHHHHHHHHHHHHHHHHHH
Q psy9736          34 KELIINEILVMRENKHPNI--VNYLDSYLVG----EELWVVMEYLPGG-SLTDVVTE-TCMDEGQIAAVCREVLQALEFL  105 (400)
Q Consensus        34 ~~~~~~Ei~~l~~l~h~ni--v~~~~~~~~~----~~~~lv~e~~~~~-~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~l  105 (400)
                      ..+..+|...+..+....|  .+.+.+....    ..-++++|++++. +|.+++.. ...+......++.++...+.-|
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence            3457889998888754433  4445554432    2458999999874 78888875 2356677889999999999999


Q ss_pred             HhCCeecCCCCCCceEecCCC---ceEEeccc
Q psy9736         106 HSNQVIHRDIKSDNILLGLDG---SVKLSKWN  134 (400)
Q Consensus       106 H~~~ivH~dikp~nil~~~~~---~~~l~dfg  134 (400)
                      |+.|++|+|+++.||+++.++   .+.++||+
T Consensus       135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld  166 (206)
T PF06293_consen  135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLD  166 (206)
T ss_pred             HHCcCCCCCCCcccEEEeCCCCceeEEEEcch
Confidence            999999999999999999887   89999998

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087|consensus

Probab=98.53  E-value=8.7e-07  Score=76.44  Aligned_cols=105  Identities=21%  Similarity=0.333  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC-CChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC
Q psy9736          33 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG-GSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSN  108 (400)
Q Consensus        33 ~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~  108 (400)
                      .+++-.+|+.+|.++.--.|.----+|.+.....+.|||++| .++.+++...   .........++..+-..+.-||..
T Consensus        53 tr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   53 TRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence            356677899999887544333333344445556788999976 4777777642   233333467888888999999999


Q ss_pred             CeecCCCCCCceEecCCCc---eEEeccchhhhh
Q psy9736         109 QVIHRDIKSDNILLGLDGS---VKLSKWNRFIAT  139 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~  139 (400)
                      +++|+|+..+||++..++.   +.++|||  +..
T Consensus       133 diiHGDLTTSNill~~~~~~~~~~lIdfg--ls~  164 (229)
T KOG3087|consen  133 DIIHGDLTTSNILLRSDGNQITPILIDFG--LSS  164 (229)
T ss_pred             CeecccccccceEEecCCCcCceEEEeec--chh
Confidence            9999999999999976643   4799999  554

>KOG3741|consensus

Probab=98.51  E-value=8e-07  Score=87.43  Aligned_cols=125  Identities=14%  Similarity=0.178  Sum_probs=94.7

Q ss_pred             EecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCC-CChHHHHh--
Q psy9736          10 FSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPG-GSLTDVVT--   82 (400)
Q Consensus        10 ~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-~~L~~~i~--   82 (400)
                      |++.....+..+++|.++..+...-.....-++..+++.|.|+|+|.++|.+    +..+++|++|.++ ++|.+..-  
T Consensus       293 yk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~  372 (655)
T KOG3741|consen  293 YKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFAN  372 (655)
T ss_pred             EeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccC
Confidence            3344444455677777744332222223456888999999999999999984    3478999999875 47776441  


Q ss_pred             -------------h-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          83 -------------E-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        83 -------------~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                                   + ...+++.++.++.|+..||.++|+.|+.-+-+.+.+|++..+.+++|+..|
T Consensus       373 ~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~  438 (655)
T KOG3741|consen  373 PPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCG  438 (655)
T ss_pred             CccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEeccc
Confidence                         1 136789999999999999999999999999999999999988888887666

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.48  E-value=9.7e-07  Score=82.45  Aligned_cols=99  Identities=16%  Similarity=0.096  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHhCCCCCcc--cccceeEe-----CCEEEEEEeccCCC-ChHHHHhh---cCCCHHHHHHHHHHHHHHHHH
Q psy9736          36 LIINEILVMRENKHPNIV--NYLDSYLV-----GEELWVVMEYLPGG-SLTDVVTE---TCMDEGQIAAVCREVLQALEF  104 (400)
Q Consensus        36 ~~~~Ei~~l~~l~h~niv--~~~~~~~~-----~~~~~lv~e~~~~~-~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~  104 (400)
                      .+.+|...+..+...+|.  ..+.++..     ...-++|||++++. +|.+++..   ...+......++.++...+.-
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            477899999888544443  33444432     23578999999875 78888753   345667788999999999999


Q ss_pred             HHhCCeecCCCCCCceEecC-------CCceEEeccc
Q psy9736         105 LHSNQVIHRDIKSDNILLGL-------DGSVKLSKWN  134 (400)
Q Consensus       105 lH~~~ivH~dikp~nil~~~-------~~~~~l~dfg  134 (400)
                      ||+.|++|+|+++.||+++.       .+.+.++||+
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~  190 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLH  190 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence            99999999999999999975       4678999999

>KOG2137|consensus

Probab=98.46  E-value=1.8e-07  Score=94.89  Aligned_cols=111  Identities=17%  Similarity=0.154  Sum_probs=74.7

Q ss_pred             CCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHH
Q psy9736         273 ALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQD  352 (400)
Q Consensus       273 t~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~d  352 (400)
                      ...|.|||.+...-....+|.+|+|+.+|.+..|.-|=+..-        -.....-.....+.....-...+++.++++
T Consensus       172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~--------~~~~~~~~~~~~~~~~~~~~s~~~p~el~~  243 (700)
T KOG2137|consen  172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAAN--------GGLLSYSFSRNLLNAGAFGYSNNLPSELRE  243 (700)
T ss_pred             CcccccchhhccccccccccceeeeeEEEEEecCCcchhhcc--------CCcchhhhhhcccccccccccccCcHHHHH
Confidence            457999999999877789999999999999986654311111        001111111111112222223557788999


Q ss_pred             HHHHhhhhhhhhhhcHHHHhcCcccccc--CCCCCcchhhh
Q psy9736         353 FLDQCLEEEVETRASASLLLKHPFLKIA--RPLASLTPLIM  391 (400)
Q Consensus       353 li~~~L~~dP~~R~s~~~~l~hp~~~~~--~~~~~l~~~~~  391 (400)
                      -|.++|..|+..||++.+++..|||...  ++.+.|-+|-+
T Consensus       244 ~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~aLrfLD~l~~  284 (700)
T KOG2137|consen  244 SLKKLLNGDSAVRPTLDLLLSIPFFSDPGLKALRFLDDLPQ  284 (700)
T ss_pred             HHHHHhcCCcccCcchhhhhcccccCCchhhhhhhcccccc
Confidence            9999999999999999999999999974  44555555444

>KOG0658|consensus

Probab=98.46  E-value=2.8e-08  Score=93.32  Aligned_cols=192  Identities=20%  Similarity=0.168  Sum_probs=134.2

Q ss_pred             HHHHHHHhhcCCCchhhhhhhhccccccc-eeeeecccccc----cccccc---cCCCC--------------------C
Q psy9736         181 INEILVMRENKHPNIVNYLDSYLVGEELW-NIVNYLDSYLV----GEELWY---TKPIE--------------------E  232 (400)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~----~~~~~~---~~~~~--------------------~  232 (400)
                      -+|..-++...|||+|.+.-.+....+-- -...++.|++=    ....+.   ....+                    .
T Consensus        65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~  144 (364)
T KOG0658|consen   65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH  144 (364)
T ss_pred             cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence            45667788999999999986665554430 01122222221    111110   00111                    1


Q ss_pred             CCCcccccccc----CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCC
Q psy9736         233 PSNTTDEKTST----SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       233 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd  307 (400)
                      ....+|+++.+    ..++.+|+||||++.-.....+. .+..+|..|+|||.+.+...+ ...|+||.|||+-||+-|.
T Consensus       145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~  223 (364)
T KOG0658|consen  145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ  223 (364)
T ss_pred             CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC
Confidence            11457999877    47799999999998877766554 778899999999999986554 6789999999999999997


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCC--C-----------------CCcc-------hhhhhcHHHHHHHHHhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNK--K-----------------PEIK-------EKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~--~-----------------~~~~-------~~~~~s~~~~dli~~~L~~d  361 (400)
                                |.+.+.+..+++..|.+--  +                 +.+.       .....++++.||+.++|+++
T Consensus       224 ----------plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~  293 (364)
T KOG0658|consen  224 ----------PLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYS  293 (364)
T ss_pred             ----------cccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccC
Confidence                      6666677777777774320  0                 1111       11235678999999999999


Q ss_pred             hhhhhcHHHHhcCccccccCCC
Q psy9736         362 VETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      |.+|.++.|+|.||||+.-+.+
T Consensus       294 P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  294 PSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             hhhcCCHHHHhcchhhHHhhCc
Confidence            9999999999999999985554

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.26  E-value=3.5e-06  Score=74.40  Aligned_cols=94  Identities=20%  Similarity=0.290  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHhCCCC--CcccccceeEeCCEEEEEEeccC--CCChHHHHhhcCCCHHHHHHHHHHHHHHHHH-HHhCC
Q psy9736          35 ELIINEILVMRENKHP--NIVNYLDSYLVGEELWVVMEYLP--GGSLTDVVTETCMDEGQIAAVCREVLQALEF-LHSNQ  109 (400)
Q Consensus        35 ~~~~~Ei~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~--~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~-lH~~~  109 (400)
                      ....+|..+|.++...  ++.+.+++.    ..++||||++  |..+.. +....++......++.+++..+.. +|..|
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~-l~~~~~~~~~~~~~~~~il~~~~~~~~~~g  127 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPR-LKDVDLSPEEPKELLEEILEEIIKMLHKAG  127 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGC-HHHCGGGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhh-HHhccccchhHHHHHHHHHHHHHHHHHhcC
Confidence            4567999999999765  455555432    2479999997  544544 333222245567777888775555 57889


Q ss_pred             eecCCCCCCceEecCCCceEEeccc
Q psy9736         110 VIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       110 ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ++|+|+.+.||+++.+ .+.++|||
T Consensus       128 ivHGDLs~~NIlv~~~-~~~iIDf~  151 (188)
T PF01163_consen  128 IVHGDLSEYNILVDDG-KVYIIDFG  151 (188)
T ss_dssp             EEESS-STTSEEEETT-CEEE--GT
T ss_pred             ceecCCChhhEEeecc-eEEEEecC
Confidence            9999999999999877 89999999

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=98.16  E-value=2.7e-05  Score=69.57  Aligned_cols=101  Identities=17%  Similarity=0.168  Sum_probs=78.3

Q ss_pred             hHHHHHHHHHHHHhCCCCC--cccccceeEe---C--CEEEEEEeccCC-CChHHHHhhc---CCCHHHHHHHHHHHHHH
Q psy9736          33 KKELIINEILVMRENKHPN--IVNYLDSYLV---G--EELWVVMEYLPG-GSLTDVVTET---CMDEGQIAAVCREVLQA  101 (400)
Q Consensus        33 ~~~~~~~Ei~~l~~l~h~n--iv~~~~~~~~---~--~~~~lv~e~~~~-~~L~~~i~~~---~l~~~~~~~i~~qi~~~  101 (400)
                      ....|.+|+..+++|...+  +.+.. ++..   .  -+-+||+|-+++ .+|.+++.+.   +.+......++.++...
T Consensus        62 g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~  140 (216)
T PRK09902         62 GRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALA  140 (216)
T ss_pred             CchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHH
Confidence            3567999999999985433  44443 2221   1  246899997753 5888887654   34677778999999999


Q ss_pred             HHHHHhCCeecCCCCCCceEecCCCc--eEEeccc
Q psy9736         102 LEFLHSNQVIHRDIKSDNILLGLDGS--VKLSKWN  134 (400)
Q Consensus       102 l~~lH~~~ivH~dikp~nil~~~~~~--~~l~dfg  134 (400)
                      +.-||+.|+.|+|+.+.||+++..|.  +.++||.
T Consensus       141 ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlE  175 (216)
T PRK09902        141 FKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLE  175 (216)
T ss_pred             HHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence            99999999999999999999987777  8999997

>KOG0669|consensus

Probab=98.07  E-value=2.3e-06  Score=77.00  Aligned_cols=144  Identities=17%  Similarity=0.168  Sum_probs=96.4

Q ss_pred             HHHHHHHHHhhcCCCchhhhhhhhccccc--------cceeeeecccccccccccccCCCCCCC----------------
Q psy9736         179 LIINEILVMRENKHPNIVNYLDSYLVGEE--------LWNIVNYLDSYLVGEELWYTKPIEEPS----------------  234 (400)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------  234 (400)
                      ..++++..++.++|+|++++.+.......        ++-+...+...|.|...-.........                
T Consensus        62 talreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH  141 (376)
T KOG0669|consen   62 TALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH  141 (376)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence            44889999999999999998865543322        444555555555443221111111111                


Q ss_pred             ----Ccccccccc---CCCCCCCCCCCCCCCCCC----CCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhh
Q psy9736         235 ----NTTDEKTST---SSASPLSTPPLSLIQPPP----PSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILE  302 (400)
Q Consensus       235 ----~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~  302 (400)
                          ..+|.++.+   +..+.++.+|||..+++.    ...+.++.++-|.+|++||.+.+.+.+ +.-|.|..||++-|
T Consensus       142 r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimae  221 (376)
T KOG0669|consen  142 RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAE  221 (376)
T ss_pred             HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHH
Confidence                225666655   677999999999986554    233455667779999999999986544 77899999999988


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHHH
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYLI  332 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i  332 (400)
                      |-++-          |.+...+...++..|
T Consensus       222 Mwtrs----------pimqgnteqqql~~I  241 (376)
T KOG0669|consen  222 MWTRS----------PIMQGNTEQQQLHLI  241 (376)
T ss_pred             HHccC----------ccccCChHHHHHHHH
Confidence            88775          666655555555555

>KOG0578|consensus

Probab=97.96  E-value=7.6e-06  Score=81.18  Aligned_cols=167  Identities=27%  Similarity=0.350  Sum_probs=106.7

Q ss_pred             cccccceeeehhhccCCCC-----------chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         157 AVASGTVYTAIESSTGMEP-----------KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      .-..+..|.|-+..++++.           ..+.+++|++.++..+|+|+|..+++|..++++|.+|+.+...-.-... 
T Consensus       283 qgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvV-  361 (550)
T KOG0578|consen  283 QGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVV-  361 (550)
T ss_pred             cccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhh-
Confidence            3345666999988877554           4568899999999999999999999999999999999999755432211 


Q ss_pred             ccCCCCCCC--------------------Ccccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce
Q psy9736         226 YTKPIEEPS--------------------NTTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV  282 (400)
Q Consensus       226 ~~~~~~~~~--------------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  282 (400)
                      ......|.+                    +.+|++.++   +..+.+|+.|||-+.+..                 +|..
T Consensus       362 t~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~-----------------~~~~  424 (550)
T KOG0578|consen  362 TKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS-----------------EEQS  424 (550)
T ss_pred             hcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccc-----------------cccC
Confidence            111123333                    346777766   577889999999876665                 6654


Q ss_pred             ecCCCCcccCCCCccchhhh---hcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhh
Q psy9736         283 LDKNKNQTTPPTGLTGSILE---FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLE  359 (400)
Q Consensus       283 ~~~~~~~~~d~~s~g~~~~~---~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~  359 (400)
                      .+..- .-+.-|..--++-.   ---.|+||+|.+..              .++.|.+|.+.+.   +-.+.-||..--.
T Consensus       425 KR~Tm-VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaI--------------EMveGEPPYlnE~---PlrAlyLIa~ng~  486 (550)
T KOG0578|consen  425 KRSTM-VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAI--------------EMVEGEPPYLNEN---PLRALYLIATNGT  486 (550)
T ss_pred             ccccc-cCCCCccchhhhhhcccCccccchhhhhHHH--------------HHhcCCCCccCCC---hHHHHHHHhhcCC
Confidence            33210 11122221111111   11129999998763              3677888887532   2234455544333

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.92  E-value=7.9e-05  Score=68.44  Aligned_cols=92  Identities=20%  Similarity=0.278  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHhCCCC--CcccccceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeec
Q psy9736          35 ELIINEILVMRENKHP--NIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIH  112 (400)
Q Consensus        35 ~~~~~Ei~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH  112 (400)
                      ...++|.++|++|...  .+.+.++    -++..+||||++|-.|...-    +....+..++..|+.-+.-.-..|+||
T Consensus       154 l~A~rEf~~L~~L~~~G~~VP~P~~----~nRHaVvMe~ieG~eL~~~r----~~~en~~~il~~il~~~~~~~~~GiVH  225 (304)
T COG0478         154 LAAEREFEALQRLYPEGVKVPKPIA----WNRHAVVMEYIEGVELYRLR----LDVENPDEILDKILEEVRKAYRRGIVH  225 (304)
T ss_pred             HHHHHHHHHHHHhhhcCCCCCCccc----cccceeeeehcccceeeccc----CcccCHHHHHHHHHHHHHHHHHcCccc
Confidence            4567999999998655  6666664    34578999999886665432    234445556666666666656789999


Q ss_pred             CCCCCCceEecCCCceEEeccc
Q psy9736         113 RDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       113 ~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +|+.+-||+++.+|.+.++||-
T Consensus       226 GDlSefNIlV~~dg~~~vIDwP  247 (304)
T COG0478         226 GDLSEFNILVTEDGDIVVIDWP  247 (304)
T ss_pred             cCCchheEEEecCCCEEEEeCc
Confidence            9999999999999999999996

>KOG0576|consensus

Probab=97.86  E-value=3.2e-06  Score=85.26  Aligned_cols=122  Identities=25%  Similarity=0.262  Sum_probs=77.7

Q ss_pred             CcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCC-cccccceeEeCCEEEEEEeccCCC-ChHH
Q psy9736           2 KRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPN-IVNYLDSYLVGEELWVVMEYLPGG-SLTD   79 (400)
Q Consensus         2 g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~-~L~~   79 (400)
                      ++|++.+..+++......-+ .+.+. ..    ....-++++|.+++|+| .+.+++.+..+...++.++|+.++ +...
T Consensus       251 vK~altknpKkRptaeklL~-h~fvs-~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~  324 (829)
T KOG0576|consen  251 VKGALTKNPKKRPTAEKLLQ-HPFVS-QT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSAL  324 (829)
T ss_pred             HHHHhcCCCccCCChhhhee-ceeec-cc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccc
Confidence            35566666666654433222 33322 11    33467899999999999 777778888788999999999766 3322


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ....  -.+.+-....+.+.-..+++++|+..-+|+|    ||+. ..+..+..+|+
T Consensus       325 ~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~-s~~~~~~~~~~  376 (829)
T KOG0576|consen  325 EMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG-SEEEVKLLDFA  376 (829)
T ss_pred             cCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc-ccccccccccc
Confidence            2211  1233334444555556789999988667887    6654 34667778887

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.85  E-value=0.00012  Score=65.61  Aligned_cols=63  Identities=25%  Similarity=0.515  Sum_probs=50.1

Q ss_pred             EEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          64 ELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ..+++|||++|..|.++..   +++    .+...+..++.-+|+.|+.|+|++|.|+++..++ ++++||+
T Consensus       117 ~~~ll~EYIeG~~l~d~~~---i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~  179 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED---IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQ  179 (229)
T ss_pred             EEEEEEEEecCeecccchh---cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECc
Confidence            4578999999988876543   232    2345566778999999999999999999998555 9999998

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.83  E-value=0.00029  Score=62.80  Aligned_cols=127  Identities=14%  Similarity=0.206  Sum_probs=89.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC----------------cchHHHHHHHHHHHHhCC------CCCcccccce
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ----------------QPKKELIINEILVMRENK------HPNIVNYLDS   58 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~Ei~~l~~l~------h~niv~~~~~   58 (400)
                      +|+|+...||.-.+...   .++|+.....                .....+..+|+.....+.      +.+|.+++++
T Consensus         9 i~~G~~R~cy~HP~dp~---~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~   85 (199)
T PF10707_consen    9 IAQGGERDCYQHPDDPN---LCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF   85 (199)
T ss_pred             cccCCCceEEECCCCCC---eEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence            57888888888755443   2344443333                112355677877776665      7899999999


Q ss_pred             eEeCCEEEEEEeccC------CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ce
Q psy9736          59 YLVGEELWVVMEYLP------GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SV  128 (400)
Q Consensus        59 ~~~~~~~~lv~e~~~------~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~  128 (400)
                      .+++...-+|+|...      ..+|.+++.++.+++ .....+.   .-..+|-+.+|+.+|++|.||++....    .+
T Consensus        86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~l  161 (199)
T PF10707_consen   86 VETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRL  161 (199)
T ss_pred             EecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH-HHHHHHH---HHHHHHHHcCCeecCCCcccEEEEecCCCceEE
Confidence            999988888888753      347888888777776 3333333   346677888999999999999997542    57


Q ss_pred             EEec-cc
Q psy9736         129 KLSK-WN  134 (400)
Q Consensus       129 ~l~d-fg  134 (400)
                      .++| ||
T Consensus       162 vlIDG~G  168 (199)
T PF10707_consen  162 VLIDGLG  168 (199)
T ss_pred             EEEeCCC
Confidence            7888 55

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.59  E-value=0.00083  Score=61.25  Aligned_cols=127  Identities=14%  Similarity=0.140  Sum_probs=74.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCC--cccccceeEeCCEEEEEEeccCCCC-h
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPN--IVNYLDSYLVGEELWVVMEYLPGGS-L   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~-L   77 (400)
                      +|.|....+|...+.    +.++|.....  ...+...+|.++++.+..-.  +.+.+.+....+...++||+++|.+ +
T Consensus         9 i~~G~t~~~y~~~~~----~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         9 TGEGGNGESYTHKTG----KWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             ecCCCCcceeEecCC----CEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            467877778875443    3445554322  23455789999999985433  4566777666777889999998853 1


Q ss_pred             H--------------HHHhh-----cC-----CCHHH-HHHHHHH----------HHHH-HHHHH----hCCeecCCCCC
Q psy9736          78 T--------------DVVTE-----TC-----MDEGQ-IAAVCRE----------VLQA-LEFLH----SNQVIHRDIKS  117 (400)
Q Consensus        78 ~--------------~~i~~-----~~-----l~~~~-~~~i~~q----------i~~~-l~~lH----~~~ivH~dikp  117 (400)
                      .              ..+.+     +.     ..... ...+..+          +... ..+|.    ...++|+|+.|
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~  162 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI  162 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence            1              11110     00     11000 1111111          1111 12222    12568999999


Q ss_pred             CceEecCCCceEEeccc
Q psy9736         118 DNILLGLDGSVKLSKWN  134 (400)
Q Consensus       118 ~nil~~~~~~~~l~dfg  134 (400)
                      .||+++..+ +.++||+
T Consensus       163 ~Nii~~~~~-~~iIDwe  178 (226)
T TIGR02172       163 GNLITSGKG-TYWIDLG  178 (226)
T ss_pred             CcEEEcCCC-cEEEech
Confidence            999999888 9999998

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.59  E-value=0.00025  Score=68.72  Aligned_cols=71  Identities=17%  Similarity=0.228  Sum_probs=57.0

Q ss_pred             EEEEEEeccCCC-ChHHHHhh----c---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          64 ELWVVMEYLPGG-SLTDVVTE----T---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        64 ~~~lv~e~~~~~-~L~~~i~~----~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ..-++|..+.+. .+..+.+.    +   .+.+....++.+.+..+..-||.+|-+-+|++++|+++++.+.+.+.|-.
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD  162 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD  162 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc
Confidence            366788877654 22233321    1   37888999999999999999999999999999999999999999999855

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.57  E-value=0.00025  Score=71.96  Aligned_cols=77  Identities=23%  Similarity=0.390  Sum_probs=52.8

Q ss_pred             CEEEEEEeccCCCChHHHH--hhcCCCHHHHHHHHHHHHHH-HHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          63 EELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCREVLQA-LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        63 ~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~i~~qi~~~-l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      +.-.++|||++|..+.+..  +...++...   ++..++.+ +.-+-..|+.|+|.+|.||+++.+|.+.+.|||  +..
T Consensus       239 ~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~---ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfG--i~g  313 (517)
T COG0661         239 TRRVLTMEWIDGIKISDIAALKSAGIDRKE---LAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFG--IVG  313 (517)
T ss_pred             CCcEEEEEeeCCEecccHHHHHhcCCCHHH---HHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCc--cee
Confidence            3457999999998888774  444455322   22222222 222233699999999999999999999999999  554


Q ss_pred             hhccc
Q psy9736         140 KLYIE  144 (400)
Q Consensus       140 ~~~~~  144 (400)
                      .+.+.
T Consensus       314 ~l~~~  318 (517)
T COG0661         314 RLDPK  318 (517)
T ss_pred             cCCHH
Confidence            44433

>KOG0607|consensus

Probab=97.50  E-value=7.2e-05  Score=69.69  Aligned_cols=132  Identities=16%  Similarity=0.164  Sum_probs=86.1

Q ss_pred             hHHHHHHHHHHhhcC-CCchhhhhhhhccccccceeeeecccc--cc---cccccccCC---------------CCCCCC
Q psy9736         177 KELIINEILVMRENK-HPNIVNYLDSYLVGEELWNIVNYLDSY--LV---GEELWYTKP---------------IEEPSN  235 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~---~~~~~~~~~---------------~~~~~~  235 (400)
                      .+.+.+|+.++..|. |+||+.+++.+...+..|-+++-+...  |.   ....|...-               .....+
T Consensus       119 R~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIA  198 (463)
T KOG0607|consen  119 RSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIA  198 (463)
T ss_pred             HHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcc
Confidence            457789999999987 479999999999998888776655321  11   111121100               011113


Q ss_pred             cccccccc------CCCCCCCCCCCCCCCC--C-----CCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCcc
Q psy9736         236 TTDEKTST------SSASPLSTPPLSLIQP--P-----PPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLT  297 (400)
Q Consensus       236 ~~~~~~~~------~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g  297 (400)
                      .+|.++-+      ...+.+|+|||-+...  .     +.+.+...+.+|+-.|||||++.-     ..|...-|-||+|
T Consensus       199 HRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG  278 (463)
T KOG0607|consen  199 HRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG  278 (463)
T ss_pred             cccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence            45666644      4568899988765442  1     233456667899999999998763     2233455788888


Q ss_pred             chhhhhcCCCC
Q psy9736         298 GSILEFLGPHK  308 (400)
Q Consensus       298 ~~~~~~~~gd~  308 (400)
                      +|+|-||+|--
T Consensus       279 vIlYImLsGYp  289 (463)
T KOG0607|consen  279 VILYIMLSGYP  289 (463)
T ss_pred             HHHHHHHhCCC
Confidence            88888888854

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.36  E-value=0.0015  Score=60.01  Aligned_cols=68  Identities=10%  Similarity=0.087  Sum_probs=43.8

Q ss_pred             EEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           7 IDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         7 ~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ..||+.....  .++++|......   ...+.+|+.+++.+. +--+.+++.+...++..++||++++|.++..
T Consensus        13 ~~v~~~~~~~--~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150          13 ATVYRLDGKN--PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             CeEEEEcCCC--CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            3445554432  356667654332   234678999988873 3445566776666667899999999877654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0605|consensus

Probab=97.31  E-value=3.2e-05  Score=76.41  Aligned_cols=198  Identities=16%  Similarity=0.179  Sum_probs=108.9

Q ss_pred             CCcceEEEE-EecCCCceeEEEEecccc--ccC---cchHHHHHHHHH------HHHhC-CCCCcccccceeEeCCEEEE
Q psy9736           1 MKRGVTIDR-FSSDDRRFFSKILSNPIT--LAQ---QPKKELIINEIL------VMREN-KHPNIVNYLDSYLVGEELWV   67 (400)
Q Consensus         1 ~g~G~~~~v-~~~~~~~~~~~va~K~~~--~~~---~~~~~~~~~Ei~------~l~~l-~h~niv~~~~~~~~~~~~~l   67 (400)
                      +|.|.|+-+ -+.++..+|.|++.|...  ..+   -...+.++.|.+      ++-.+ .-.|+--+.++++.++..-|
T Consensus       152 GAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTL  231 (550)
T KOG0605|consen  152 GAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTL  231 (550)
T ss_pred             ccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHH
Confidence            578855554 566888889999888643  222   123345666643      11122 34566556677765552222


Q ss_pred             EEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC----Cee---cCCCCCCceEecCCCc-------------
Q psy9736          68 VMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN----QVI---HRDIKSDNILLGLDGS-------------  127 (400)
Q Consensus        68 v~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~----~iv---H~dikp~nil~~~~~~-------------  127 (400)
                      +   +.-++|.+-..+..+.+   ..++.+.+.-+.|+|.-    ++.   -|.||-+-+=+. .|.             
T Consensus       232 L---~~~~~L~e~~arfYiaE---~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs-~gl~~~~~~~~~~~~~  304 (550)
T KOG0605|consen  232 L---MRKDTLTEDWARFYIAE---TVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLS-TGLDKKHRIESYRLDE  304 (550)
T ss_pred             H---HhcCcCchHHHHHHHHH---HHHHHHHHHHcCcccccCChhheeecCCCCEeecccccc-chhhhhhhhhhhcchh
Confidence            2   22345544333322322   33466777778888841    221   233444333332 111             


Q ss_pred             --------eEEeccchhhhhhhccccchhhcccc------ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCC
Q psy9736         128 --------VKLSKWNRFIATKLYIEISKVIIYCW------DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP  193 (400)
Q Consensus       128 --------~~l~dfg~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
                              .+-.||..+-+. ............|      ......||+.|+|||++.|+.                   
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-------------------  364 (550)
T KOG0605|consen  305 QMQINLSEAKPSDFPKFNTP-RSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-------------------  364 (550)
T ss_pred             hhhhhhccCCCccccccccc-cchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-------------------
Confidence                    111222200000 0000001111111      235678999999999999986                   


Q ss_pred             chhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         194 NIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                              |...+|-||+||+++|+|.|.++|.+....++
T Consensus       365 --------Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T  396 (550)
T KOG0605|consen  365 --------YGKECDWWSLGCIMYEMLVGYPPFCSETPQET  396 (550)
T ss_pred             --------CCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    88999999999999999999999987554443

>KOG0664|consensus

Probab=97.30  E-value=6.3e-05  Score=68.53  Aligned_cols=202  Identities=16%  Similarity=0.156  Sum_probs=122.6

Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhccccc-----cceeeeecccccc-----------------------cccccccC
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLVGEE-----LWNIVNYLDSYLV-----------------------GEELWYTK  228 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~-----------------------~~~~~~~~  228 (400)
                      .+..-+|+.-+-.+||.|+.+.+|.-....-     +|-+.++++..|.                       |..+..+.
T Consensus        96 ~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA  175 (449)
T KOG0664|consen   96 CKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA  175 (449)
T ss_pred             HHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc
Confidence            3456788888899999999988876554431     3333333332222                       22221111


Q ss_pred             CCCCCCCcccccccc---CCCCCCCCCCCCCCCCCCCCCCC-CCccCCCCccCCCcceecCCCC-cccCCCCccchhhhh
Q psy9736         229 PIEEPSNTTDEKTST---SSASPLSTPPLSLIQPPPPSTPP-RSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEF  303 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~  303 (400)
                          ..-.+|+++.+   -+-+.+|+||||+.+-....... -++-.-|.-|+|||.+-+.+.+ ...|+||+||++-|+
T Consensus       176 ----~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaEL  251 (449)
T KOG0664|consen  176 ----NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAEL  251 (449)
T ss_pred             ----chhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHH
Confidence                11236777766   46699999999998866544432 2334557889999999987644 566777777777777


Q ss_pred             cCCCCc--cccccc---------ccCcchhh--cHHHHHHHHHhCC--CCCcc------hhhhhcHHHHHHHHHhhhhhh
Q psy9736         304 LGPHKW--SFQPHF---------LIPYLFIL--SCRQALYLIATNK--KPEIK------EKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       304 ~~gd~w--s~g~~~---------~~P~~~~~--~~~~~~~~i~~~~--~~~~~------~~~~~s~~~~dli~~~L~~dP  362 (400)
                      ++-.+.  +-+.+-         ..|-..++  -.+....+++++.  .|.++      .+..-.....+++.++|..||
T Consensus       252 LgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~  331 (449)
T KOG0664|consen  252 LQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDP  331 (449)
T ss_pred             HhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCC
Confidence            776651  000000         11211111  0122333344432  12222      122223367899999999999


Q ss_pred             hhhhcHHHHhcCccccccCC
Q psy9736         363 ETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ++|++.++++.|+++.+.|-
T Consensus       332 dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  332 DKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             cccccHhhhcccccccccce
Confidence            99999999999999987664

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.29  E-value=0.00089  Score=59.20  Aligned_cols=93  Identities=26%  Similarity=0.241  Sum_probs=74.7

Q ss_pred             HHHHHHHHhCCC-CCcccccceeEeCCEEEEEEeccCCCChHHH----HhhcCCCHHHHHHHHHHHHHHHHHHHh---CC
Q psy9736          38 INEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGSLTDV----VTETCMDEGQIAAVCREVLQALEFLHS---NQ  109 (400)
Q Consensus        38 ~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~----i~~~~l~~~~~~~i~~qi~~~l~~lH~---~~  109 (400)
                      .+|.-+++.+++ +++.+++|++-    .++++||...+++...    .+-..-++..+..++.+++..+.+++.   ..
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            468888888866 69999999884    2568999976655321    111235889999999999999999997   36


Q ss_pred             eecCCCCCCceEecCCCceEEeccc
Q psy9736         110 VIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       110 ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +.-+|++++|+.++.+|.++++|.+
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld  107 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLD  107 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEech
Confidence            7789999999999999999999987

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.24  E-value=0.0025  Score=58.08  Aligned_cols=93  Identities=14%  Similarity=0.206  Sum_probs=65.4

Q ss_pred             HHHHHHHHhCCC--CCcccccceeEeCCEEEEEEeccCCC-ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecC
Q psy9736          38 INEILVMRENKH--PNIVNYLDSYLVGEELWVVMEYLPGG-SLTDVVTETCMDEGQIAAVCREVLQALEFLHS-NQVIHR  113 (400)
Q Consensus        38 ~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~-~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~  113 (400)
                      .+|...|+++..  -.+.+-+.+.    ...++|||+... .-...++.-.+.......+..+++..+.-|-. .++||+
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHg  191 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHG  191 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccc
Confidence            467777777632  2333444433    357999999542 22223333344444678888888888888776 799999


Q ss_pred             CCCCCceEecCCCceEEeccch
Q psy9736         114 DIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus       114 dikp~nil~~~~~~~~l~dfg~  135 (400)
                      |+..-||++. .+.+.++|||+
T Consensus       192 DLSEyNiL~~-~~~p~iID~~Q  212 (268)
T COG1718         192 DLSEYNILVH-DGEPYIIDVSQ  212 (268)
T ss_pred             cchhhheEEE-CCeEEEEECcc
Confidence            9999999999 88999999994

>KOG0581|consensus

Probab=97.19  E-value=8.1e-05  Score=70.54  Aligned_cols=81  Identities=21%  Similarity=0.318  Sum_probs=58.2

Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhccccc-cceeeeecccccccccccccCCCCCCC---------------------
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLVGEE-LWNIVNYLDSYLVGEELWYTKPIEEPS---------------------  234 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~---------------------  234 (400)
                      .+++.+|+..++.+.+|++|.+.+.+....+ +.-+++.++..-.....-.....+|+.                     
T Consensus       121 ~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I  200 (364)
T KOG0581|consen  121 QKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKI  200 (364)
T ss_pred             HHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCe
Confidence            3588999999999999999999988888875 666666665443332222222233332                     


Q ss_pred             Ccccccccc---CCCCCCCCCCCCCC
Q psy9736         235 NTTDEKTST---SSASPLSTPPLSLI  257 (400)
Q Consensus       235 ~~~~~~~~~---~~~~~~~~~~~~~~  257 (400)
                      ..+|+++++   -+.+++|+||||..
T Consensus       201 IHRDIKPsNlLvNskGeVKicDFGVS  226 (364)
T KOG0581|consen  201 IHRDIKPSNLLVNSKGEVKICDFGVS  226 (364)
T ss_pred             eeccCCHHHeeeccCCCEEecccccc
Confidence            557889877   47899999999983

>KOG2345|consensus

Probab=97.17  E-value=0.00017  Score=64.99  Aligned_cols=140  Identities=19%  Similarity=0.149  Sum_probs=91.8

Q ss_pred             HHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec-ccccc-c------------ccccc-----------------c
Q psy9736         179 LIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL-DSYLV-G------------EELWY-----------------T  227 (400)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~-~------------~~~~~-----------------~  227 (400)
                      ...+|+...+.+.+||+.++.+....+..=|+-...+ .+... |            ...+.                 -
T Consensus        64 ~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l  143 (302)
T KOG2345|consen   64 EALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL  143 (302)
T ss_pred             HHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999998887776622221111 11111 1            00000                 0


Q ss_pred             CCCCCCCCcccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCc---------cCCCCccCCCcceecCCCCcccCCCC
Q psy9736         228 KPIEEPSNTTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRST---------LNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                      -....+-+.+|+++++   +..+.-..-|||+..+..-....+..         -.+|..|+|||.+.-+-+...+.+. 
T Consensus       144 H~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ert-  222 (302)
T KOG2345|consen  144 HEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERT-  222 (302)
T ss_pred             hccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccccccc-
Confidence            0111234667888877   45677888899988876644433333         3569999999999998877888888 


Q ss_pred             ccchhhhhcCCCCcccccccccCcchhhcHHHHHHH
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYL  331 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~  331 (400)
                                 |+||+||++..=-+. .+|.+..++
T Consensus       223 -----------DIWSLGCtLYa~mf~-~sPfe~~~~  246 (302)
T KOG2345|consen  223 -----------DIWSLGCTLYAMMFG-ESPFERIYQ  246 (302)
T ss_pred             -----------chhhhhHHHHHHHHc-CCcchHHhh
Confidence                       999999998433333 667666665

>KOG0667|consensus

Probab=97.11  E-value=0.00015  Score=73.38  Aligned_cols=170  Identities=20%  Similarity=0.272  Sum_probs=99.7

Q ss_pred             CcceEEEEEecC-CCceeEEEEeccccccCcchHHH-HHHHHH---------HHH---hCCCCCcccc-cceeEeCCEEE
Q psy9736           2 KRGVTIDRFSSD-DRRFFSKILSNPITLAQQPKKEL-IINEIL---------VMR---ENKHPNIVNY-LDSYLVGEELW   66 (400)
Q Consensus         2 g~G~~~~v~~~~-~~~~~~~va~K~~~~~~~~~~~~-~~~Ei~---------~l~---~l~h~niv~~-~~~~~~~~~~~   66 (400)
                      .-|-+.+++.-. ++.+|.||+.+.-....+...|- ++..+.         +++   .+.|+|=..+ ++.+..     
T Consensus       198 tFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-----  272 (586)
T KOG0667|consen  198 SFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-----  272 (586)
T ss_pred             ccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-----
Confidence            457778887775 78888999888877666544332 222222         112   2234432222 121111     


Q ss_pred             EEEeccCC-----CChHHHHhhcCCCHHHHHHHHHHH--HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccch
Q psy9736          67 VVMEYLPG-----GSLTDVVTETCMDEGQIAAVCREV--LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        67 lv~e~~~~-----~~L~~~i~~~~l~~~~~~~i~~qi--~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~  135 (400)
                      -++||+..     -+|. .++.      ....++..+  +..+.-.|-    .+|.-.+-+...|-+-+-|...-.+=+ 
T Consensus       273 NLYellK~n~f~Glsl~-~ir~------~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~-  344 (586)
T KOG0667|consen  273 NLYELLKNNKFRGLSLP-LVRK------FAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR-  344 (586)
T ss_pred             hHHHHHHhcCCCCCCHH-HHHH------HHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc-
Confidence            23444432     2332 2221      122222222  334444552    388888888888888666644322222 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                           .+...              .+.-|+|||++.|-+                           |....||||+||++
T Consensus       345 -----vytYi--------------QSRfYRAPEVILGlp---------------------------Y~~~IDmWSLGCIl  378 (586)
T KOG0667|consen  345 -----VYTYI--------------QSRFYRAPEVILGLP---------------------------YDTAIDMWSLGCIL  378 (586)
T ss_pred             -----ceeee--------------eccccccchhhccCC---------------------------CCCccceeehhhhH
Confidence                 22211              245699999999986                           88999999999999


Q ss_pred             ccccccccccccCCC
Q psy9736         216 DSYLVGEELWYTKPI  230 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~  230 (400)
                      +|+++|.+.|.+...
T Consensus       379 AEL~tG~PLfpG~ne  393 (586)
T KOG0667|consen  379 AELFTGEPLFPGDNE  393 (586)
T ss_pred             HhHhcCccccCCCCH
Confidence            999999999987543

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.01  E-value=0.0031  Score=56.89  Aligned_cols=73  Identities=18%  Similarity=0.239  Sum_probs=44.0

Q ss_pred             cceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCC--cccccceeE---eCCEEEEEEeccCCCCh
Q psy9736           3 RGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPN--IVNYLDSYL---VGEELWVVMEYLPGGSL   77 (400)
Q Consensus         3 ~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~~~~~~~---~~~~~~lv~e~~~~~~L   77 (400)
                      .|....+|..+...  .++++|.....  ...+.+.+|..+++.+....  +.+++....   .....++++++++|..+
T Consensus         7 ~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~   82 (239)
T PF01636_consen    7 GGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPL   82 (239)
T ss_dssp             ESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEH
T ss_pred             CCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccc
Confidence            34444455544433  26677765433  34567789999998884332  455555332   23467999999988777


Q ss_pred             HH
Q psy9736          78 TD   79 (400)
Q Consensus        78 ~~   79 (400)
                      ..
T Consensus        83 ~~   84 (239)
T PF01636_consen   83 DD   84 (239)
T ss_dssp             HH
T ss_pred             cc
Confidence            66

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1235|consensus

Probab=96.94  E-value=0.0029  Score=64.30  Aligned_cols=78  Identities=18%  Similarity=0.240  Sum_probs=53.0

Q ss_pred             EEEEEEeccCCCChHH--HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC----CCceEEeccchhh
Q psy9736          64 ELWVVMEYLPGGSLTD--VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL----DGSVKLSKWNRFI  137 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~--~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~----~~~~~l~dfg~~~  137 (400)
                      .-.|+|||++|..+.+  .+++..++...+...+.+...-.  +-..|++|+|-+|.||++..    ++.+.+.|||  +
T Consensus       276 ~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~q--If~~GffHaDPHPGNilv~~~~~~~~~ivllDhG--l  351 (538)
T KOG1235|consen  276 KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQ--IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHG--L  351 (538)
T ss_pred             ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHH--HHhcCCccCCCCCCcEEEecCCCCCccEEEEccc--c
Confidence            4689999999987765  44555677665444443332222  22358999999999999984    5789999999  4


Q ss_pred             hhhhcccc
Q psy9736         138 ATKLYIEI  145 (400)
Q Consensus       138 ~~~~~~~~  145 (400)
                      ...+....
T Consensus       352 ~~~is~~~  359 (538)
T KOG1235|consen  352 YAVISHKT  359 (538)
T ss_pred             cccccHHH
Confidence            44344333

>KOG0615|consensus

Probab=96.83  E-value=0.00045  Score=66.48  Aligned_cols=46  Identities=17%  Similarity=0.201  Sum_probs=40.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +=||+.|.|||.+.++...                        .+....|+||+||+++=.|+|.++|..
T Consensus       338 lCGTpsYvAPEVl~~kg~~------------------------~~~~kVDiWSlGcvLfvcLsG~pPFS~  383 (475)
T KOG0615|consen  338 LCGTPSYVAPEVLASKGVE------------------------YYPSKVDIWSLGCVLFVCLSGYPPFSE  383 (475)
T ss_pred             hcCCccccChhheecCCee------------------------cccchheeeeccceEEEEeccCCCccc
Confidence            3478999999999998854                        566789999999999999999999976

>KOG0585|consensus

Probab=96.82  E-value=0.001  Score=65.24  Aligned_cols=83  Identities=23%  Similarity=0.389  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhhhc--cccccceeeeecccccccccccccCCCC---CCC------------------
Q psy9736         178 ELIINEILVMRENKHPNIVNYLDSYL--VGEELWNIVNYLDSYLVGEELWYTKPIE---EPS------------------  234 (400)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~------------------  234 (400)
                      +...+||+-++.++|+|+|++.++-.  ..+.+|.+.+.+.   .|...|-..+-+   +++                  
T Consensus       153 ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s---~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q  229 (576)
T KOG0585|consen  153 EKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCS---KGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ  229 (576)
T ss_pred             HHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEecc---CCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc
Confidence            36789999999999999999996543  4566888888887   455555443333   111                  


Q ss_pred             --Ccccccccc---CCCCCCCCCCCCCCCCCCCC
Q psy9736         235 --NTTDEKTST---SSASPLSTPPLSLIQPPPPS  263 (400)
Q Consensus       235 --~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  263 (400)
                        ..+|+++++   ++.+.+|++|||......+.
T Consensus       230 giiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~  263 (576)
T KOG0585|consen  230 GIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQG  263 (576)
T ss_pred             CeeccccchhheEEcCCCcEEeeccceeeecccC
Confidence              447899877   68899999999987765544

>KOG0575|consensus

Probab=96.73  E-value=0.0004  Score=69.76  Aligned_cols=172  Identities=16%  Similarity=0.163  Sum_probs=96.7

Q ss_pred             ceEEEEEecCCCceeEEEEec----cccccCcchHH-HHHHHHH---HHHh---C-CCCCcccccceeEeCCEEEEEEec
Q psy9736           4 GVTIDRFSSDDRRFFSKILSN----PITLAQQPKKE-LIINEIL---VMRE---N-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         4 G~~~~v~~~~~~~~~~~va~K----~~~~~~~~~~~-~~~~Ei~---~l~~---l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ++|-.....++..+|.||+-|    +-...+....| ++.+.+.   |++-   + +..||--+++.|..+    -+||+
T Consensus        33 ~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~----sL~el  108 (592)
T KOG0575|consen   33 RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRG----SLMEL  108 (592)
T ss_pred             EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCc----cHHHH
Confidence            355555669999999999998    44333222222 1222222   2221   1 345666666666654    35666


Q ss_pred             cC-CCChHHHHhhcCCCHHHHHHHHHHH--HHHHHHHHhC-CeecCCCCCC-ceEecCCCceEEeccchhhhhhhccccc
Q psy9736          72 LP-GGSLTDVVTETCMDEGQIAAVCREV--LQALEFLHSN-QVIHRDIKSD-NILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        72 ~~-~~~L~~~i~~~~l~~~~~~~i~~qi--~~~l~~lH~~-~ivH~dikp~-nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      +. ...|.+--.+.     ...+|+..+  +....-+|.- .+-.--|+-. |+-|++-|-.....-.  ..+    ..+
T Consensus       109 ~Krrk~ltEpEary-----~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~--~Er----k~T  177 (592)
T KOG0575|consen  109 LKRRKPLTEPEARY-----FLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD--GER----KKT  177 (592)
T ss_pred             HHhcCCCCcHHHHH-----HHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc--ccc----cce
Confidence            54 22343322211     123333333  3445556632 2222233444 5666666654433321  111    111


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      -           =||++|.|||+++.+.                           +....|+|++||+++.+|.|.|+|+
T Consensus       178 l-----------CGTPNYIAPEVl~k~g---------------------------HsfEvDiWSlGcvmYtLL~G~PPFe  219 (592)
T KOG0575|consen  178 L-----------CGTPNYIAPEVLNKSG---------------------------HSFEVDIWSLGCVMYTLLVGRPPFE  219 (592)
T ss_pred             e-----------cCCCcccChhHhccCC---------------------------CCCchhhhhhhhHHHhhhhCCCCcc
Confidence            1           2688999999999654                           6789999999999999999999998


Q ss_pred             cC
Q psy9736         227 TK  228 (400)
Q Consensus       227 ~~  228 (400)
                      ..
T Consensus       220 tk  221 (592)
T KOG0575|consen  220 TK  221 (592)
T ss_pred             cc
Confidence            65

>KOG1152|consensus

Probab=96.71  E-value=0.00083  Score=67.29  Aligned_cols=125  Identities=14%  Similarity=0.111  Sum_probs=77.2

Q ss_pred             HHHHHHH---hhcCCCchhhhhhhhccccccceeeeecccccc--cccccccCCCCCCC--------------------C
Q psy9736         181 INEILVM---RENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV--GEELWYTKPIEEPS--------------------N  235 (400)
Q Consensus       181 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~--------------------~  235 (400)
                      +-||.-+   +...|+||++.++.+-..+-.+-.++.=.+.+.  ..--| .....|..                    .
T Consensus       614 p~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~iv  692 (772)
T KOG1152|consen  614 PSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIV  692 (772)
T ss_pred             chhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhccccccccCce
Confidence            4555544   445599999999987766655544443333211  00000 11111111                    3


Q ss_pred             cccccccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCC
Q psy9736         236 TTDEKTST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       236 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~  308 (400)
                      .+|++.-+   .+-+.++.-|||...- .. ..|...+.||..|.|||++.+.+|- ..-|+|++|+++|.+..-..
T Consensus       693 hrdikdenvivd~~g~~klidfgsaa~-~k-sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken  767 (772)
T KOG1152|consen  693 HRDIKDENVIVDSNGFVKLIDFGSAAY-TK-SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN  767 (772)
T ss_pred             ecccccccEEEecCCeEEEeeccchhh-hc-CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence            35555544   5778888989987531 11 2356688999999999999998887 45677877777777766655

>KOG0598|consensus

Probab=96.58  E-value=0.00052  Score=65.11  Aligned_cols=45  Identities=22%  Similarity=0.335  Sum_probs=40.9

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      +-||..|+|||++.+..                           |....|-|++|.+++++|+|.++|....
T Consensus       185 fcGT~eYmAPEil~~~g---------------------------y~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  185 FCGTPEYMAPEILLGKG---------------------------YDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             ccCCccccChHHHhcCC---------------------------CCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence            67899999999999986                           7899999999999999999999998744

>KOG0597|consensus

Probab=96.56  E-value=0.00034  Score=69.88  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=38.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||+.|||||+..+..                           |....|+|++||+++|++.|.++|...
T Consensus       161 kGtPlYmAPElv~e~p---------------------------yd~~sDlWslGcilYE~~~G~PPF~a~  203 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQP---------------------------YDHTSDLWSLGCILYELYVGQPPFYAR  203 (808)
T ss_pred             cCcccccCHHHHcCCC---------------------------ccchhhHHHHHHHHHHHhcCCCCchHH
Confidence            3688899999999765                           789999999999999999999999743

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=96.50  E-value=0.00089  Score=71.04  Aligned_cols=82  Identities=11%  Similarity=0.036  Sum_probs=58.3

Q ss_pred             cCCCCCC-ceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhc
Q psy9736         112 HRDIKSD-NILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMREN  190 (400)
Q Consensus       112 H~dikp~-nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~  190 (400)
                      +++..|. |+++...+..++.|||  .+......     ...+......||..|+|||.+.|..                
T Consensus       500 ~~~~~p~~~~~~~p~~~~~~~~~~--~~~~~~~g-----~~~~~~~~~vGT~~Y~APE~l~~~~----------------  556 (669)
T cd05610         500 TQKPRPHGNLYQTPKQVKIGTPYR--TPKSVRRG-----AAPVEGERILGTPDYLAPELLLGKP----------------  556 (669)
T ss_pred             CCCCCCCCceeECCccccccccCC--Cchhhhcc-----cccccCCceeeCccccCHHHcCCCC----------------
Confidence            3455555 5666666677888888  44322111     1223334568999999999998864                


Q ss_pred             CCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         191 KHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                 +....|+|++|++++++++|..+|..
T Consensus       557 -----------~~~~~DiwSlG~il~ElltG~~pf~~  582 (669)
T cd05610         557 -----------HGPAVDWWALGVCLFEFLTGIPPFND  582 (669)
T ss_pred             -----------CCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                       56778999999999999999988754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1290|consensus

Probab=96.46  E-value=0.00069  Score=66.53  Aligned_cols=63  Identities=19%  Similarity=0.210  Sum_probs=49.6

Q ss_pred             CceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccc
Q psy9736         126 GSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVG  205 (400)
Q Consensus       126 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (400)
                      -++||+|||  -|-+....          .+....|..|+|||.+.|..                           |...
T Consensus       391 i~vKIaDlG--NACW~~kh----------FT~DIQTRQYRapEVllGsg---------------------------Y~~~  431 (590)
T KOG1290|consen  391 IRVKIADLG--NACWVHKH----------FTEDIQTRQYRAPEVLLGSG---------------------------YSTS  431 (590)
T ss_pred             eeEEEeecc--chhhhhhh----------hchhhhhhhccCcceeecCC---------------------------CCCc
Confidence            468999999  22221111          23446788899999999986                           8899


Q ss_pred             cccceeeeeccccccccccccc
Q psy9736         206 EELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       206 ~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      -||||++|++.|+.||.-.|..
T Consensus       432 ADiWS~AC~~FELaTGDyLFeP  453 (590)
T KOG1290|consen  432 ADIWSTACMAFELATGDYLFEP  453 (590)
T ss_pred             hhHHHHHHHHHHhhcCceeecC
Confidence            9999999999999999988865

>KOG0671|consensus

Probab=96.45  E-value=0.0012  Score=63.06  Aligned_cols=68  Identities=22%  Similarity=0.240  Sum_probs=54.4

Q ss_pred             cCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhh
Q psy9736         123 GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSY  202 (400)
Q Consensus       123 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (400)
                      .++..++++|||  .|..-..          .......|..|+|||+++|..                           .
T Consensus       246 ~ks~~I~vIDFG--sAtf~~e----------~hs~iVsTRHYRAPEViLgLG---------------------------w  286 (415)
T KOG0671|consen  246 LKSTAIKVIDFG--SATFDHE----------HHSTIVSTRHYRAPEVILGLG---------------------------W  286 (415)
T ss_pred             CCCcceEEEecC--Ccceecc----------CcceeeeccccCCchheeccC---------------------------c
Confidence            356679999999  4442211          224567899999999999986                           6


Q ss_pred             ccccccceeeeecccccccccccccCC
Q psy9736         203 LVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       203 ~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      ....|+||+||++.|+.+|...|+...
T Consensus       287 S~pCDvWSiGCIL~ElytG~~LFqtHe  313 (415)
T KOG0671|consen  287 SQPCDVWSIGCILVELYTGETLFQTHE  313 (415)
T ss_pred             CCccCceeeeeEEEEeeccceecccCC
Confidence            788999999999999999999998755

>KOG1035|consensus

Probab=96.37  E-value=0.0079  Score=65.33  Aligned_cols=76  Identities=20%  Similarity=0.196  Sum_probs=57.1

Q ss_pred             HHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeec
Q psy9736          38 INEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIH  112 (400)
Q Consensus        38 ~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH  112 (400)
                      .-|+..+....|.|++.++.+...+.    ...+..++|..-++...+.. +..+.++.+.+..++..|+.++|+....|
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~  309 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEH  309 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccce
Confidence            34566677789999999987765432    22345678877788777765 46888999999999999999999984444


Q ss_pred             C
Q psy9736         113 R  113 (400)
Q Consensus       113 ~  113 (400)
                      .
T Consensus       310 v  310 (1351)
T KOG1035|consen  310 V  310 (1351)
T ss_pred             e
Confidence            3

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.31  E-value=0.026  Score=51.53  Aligned_cols=26  Identities=15%  Similarity=0.220  Sum_probs=23.0

Q ss_pred             CeecCCCCCCceEecCCCceEEeccc
Q psy9736         109 QVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .++|+|+.+.|++++..+...++||+
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~  190 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFG  190 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCc
Confidence            58999999999999876656799999

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=96.27  E-value=0.054  Score=58.98  Aligned_cols=57  Identities=16%  Similarity=0.185  Sum_probs=36.6

Q ss_pred             EEEeccccccC-cchHHHHHHHHHHHHhCC-CCCc--ccccceeEeC---CEEEEEEeccCCCC
Q psy9736          20 KILSNPITLAQ-QPKKELIINEILVMRENK-HPNI--VNYLDSYLVG---EELWVVMEYLPGGS   76 (400)
Q Consensus        20 ~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~-h~ni--v~~~~~~~~~---~~~~lv~e~~~~~~   76 (400)
                      ++++|+..... ......+.+|+.+++.+. |.++  .+++.++.+.   +..|+||||++|..
T Consensus        67 ~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         67 RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            44555443222 123356889999999985 6654  5666655543   46789999998754

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.24  E-value=0.03  Score=48.59  Aligned_cols=120  Identities=14%  Similarity=0.130  Sum_probs=79.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccc-ccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVN-YLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|..+.||++...-  ..+++|+...+  ..+..+..|.++|..+.-.++.. +|.+..    .++.|||+.|..|.+
T Consensus        30 L~KG~~s~Vyl~~~~~--~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~  101 (201)
T COG2112          30 LAKGTTSVVYLGEWRG--GEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGK  101 (201)
T ss_pred             hhcccccEEEEeeccC--ceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhh
Confidence            5789999999876543  36777775433  35677899999999987666544 333222    345599998888877


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC-CCceEecCCCceEEeccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIK-SDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dik-p~nil~~~~~~~~l~dfg  134 (400)
                      .....  +..++.    .++..-.-|-..||-|+.++ |...++..++.+-|+||.
T Consensus       102 ~~~~~--~rk~l~----~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd  151 (201)
T COG2112         102 LEIGG--DRKHLL----RVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFD  151 (201)
T ss_pred             hhhcc--cHHHHH----HHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEcc
Confidence            65432  233333    33333333445689898886 555555566689999998

>KOG1151|consensus

Probab=96.19  E-value=0.004  Score=60.66  Aligned_cols=78  Identities=19%  Similarity=0.296  Sum_probs=45.2

Q ss_pred             HHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc-ccc-------------------------cCCCCCCC
Q psy9736         181 INEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE-LWY-------------------------TKPIEEPS  234 (400)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-------------------------~~~~~~~~  234 (400)
                      -+|.---+++-|+-||+++|.+...+|-  + |.+-|++-|.. .|+                         -+-...+.
T Consensus       515 cREyrIHKeLDHpRIVKlYDyfslDtds--F-CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPI  591 (775)
T KOG1151|consen  515 CREYRIHKELDHPRIVKLYDYFSLDTDS--F-CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPI  591 (775)
T ss_pred             HHHHhhhhccCcceeeeeeeeeeecccc--c-eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence            3444445678899999999988887763  2 33334444432 222                         11112222


Q ss_pred             Ccccccccc------CCCCCCCCCCCCCCCCCC
Q psy9736         235 NTTDEKTST------SSASPLSTPPLSLIQPPP  261 (400)
Q Consensus       235 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~  261 (400)
                      +..|.++.+      ...+..|+.|||+..-..
T Consensus       592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMd  624 (775)
T KOG1151|consen  592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMD  624 (775)
T ss_pred             eeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence            344666644      355889999999864433

>KOG4645|consensus

Probab=96.12  E-value=0.0019  Score=70.33  Aligned_cols=48  Identities=19%  Similarity=0.297  Sum_probs=41.7

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..+||+-|||||.++|-...                        ......|+|++||++-|+.||..+|..-
T Consensus      1397 ~~~GT~~YMAPEvit~t~~k------------------------G~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGK------------------------GHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             hhcCCchhcCchhhcccccC------------------------CCCcchhhhcccceEEEeecCCCchhhc
Confidence            46899999999999996633                        4678899999999999999999999763

>KOG0574|consensus

Probab=96.05  E-value=0.0026  Score=58.95  Aligned_cols=80  Identities=23%  Similarity=0.395  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc-cccCCCCCCCC--------------------c
Q psy9736         178 ELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL-WYTKPIEEPSN--------------------T  236 (400)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~--------------------~  236 (400)
                      ..++-||.-++.|+.+++|+++++|-...|+|-+++.|.....+... ....+..++.+                    .
T Consensus        73 QEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIH  152 (502)
T KOG0574|consen   73 QEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIH  152 (502)
T ss_pred             HHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999765544332 33444444442                    2


Q ss_pred             ccccccc---CCCCCCCCCCCCCC
Q psy9736         237 TDEKTST---SSASPLSTPPLSLI  257 (400)
Q Consensus       237 ~~~~~~~---~~~~~~~~~~~~~~  257 (400)
                      ++++..+   --.+..|.+|||..
T Consensus       153 RDIKAGNILLNT~G~AKLADFGVA  176 (502)
T KOG0574|consen  153 RDIKAGNILLNTDGIAKLADFGVA  176 (502)
T ss_pred             hhcccccEEEcccchhhhhhcccc
Confidence            5677655   24588999999983

>KOG0582|consensus

Probab=95.83  E-value=0.0032  Score=61.37  Aligned_cols=87  Identities=23%  Similarity=0.321  Sum_probs=64.2

Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc--cCCCCCCC--------------------C
Q psy9736         178 ELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY--TKPIEEPS--------------------N  235 (400)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~--------------------~  235 (400)
                      +.+..|+.++..+.|||++++.-++..++.+|.++-.+...-.-...+.  ....+|..                    +
T Consensus        69 d~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~I  148 (516)
T KOG0582|consen   69 DALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHI  148 (516)
T ss_pred             HHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence            4678999999999999999999999999999999877744333222221  22233332                    4


Q ss_pred             cccccccc---CCCCCCCCCCCCCCCCCCCCC
Q psy9736         236 TTDEKTST---SSASPLSTPPLSLIQPPPPST  264 (400)
Q Consensus       236 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  264 (400)
                      .++.++.+   ++.+.++.+|||......++.
T Consensus       149 HRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  149 HRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             ecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            46777755   788999999999887777654

>KOG0670|consensus

Probab=95.81  E-value=0.0038  Score=61.98  Aligned_cols=35  Identities=37%  Similarity=0.572  Sum_probs=31.8

Q ss_pred             hhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         345 KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       345 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ..-..+++||.+||..||++|.|+.++|.||||+.
T Consensus       717 ~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  717 KIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            35557999999999999999999999999999974

>KOG0592|consensus

Probab=95.74  E-value=0.0023  Score=63.75  Aligned_cols=182  Identities=14%  Similarity=0.173  Sum_probs=100.3

Q ss_pred             eEEEEEecCCCceeEEEEecc--ccccCc--chH-HHHHHHHH-------HHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           5 VTIDRFSSDDRRFFSKILSNP--ITLAQQ--PKK-ELIINEIL-------VMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         5 ~~~~v~~~~~~~~~~~va~K~--~~~~~~--~~~-~~~~~Ei~-------~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      |+.+.-...++++|.||+-|.  ++....  ..+ +..+..+.       +.-++ +-.++=-++++..+++    +++|
T Consensus        89 V~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGd----ll~~  164 (604)
T KOG0592|consen   89 VVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGD----LLDL  164 (604)
T ss_pred             EEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCc----HHHH
Confidence            667777889999999987653  111111  112 22233221       11122 2345544556665554    2233


Q ss_pred             c-CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC----Cee-cCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          72 L-PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN----QVI-HRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        72 ~-~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~----~iv-H~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      + ..|++.+.-.+..  -.++. -+.+.+.+..-.|.-    +|. -+|   ..|.+.+-|..++.+=- .....   ..
T Consensus       165 i~K~Gsfde~caR~Y--AAeIl-dAleylH~~GIIHRDlKPENILLd~d---mhikITDFGsAK~l~~~-~~~~~---~~  234 (604)
T KOG0592|consen  165 IKKYGSFDETCARFY--AAEIL-DALEYLHSNGIIHRDLKPENILLDKD---GHIKITDFGSAKILSPS-QKSQE---NP  234 (604)
T ss_pred             HHHhCcchHHHHHHH--HHHHH-HHHHHHHhcCceeccCChhheeEcCC---CcEEEeeccccccCChh-hcccc---Cc
Confidence            2 2356655443321  11111 123445555556631    332 333   34778888888865421 01110   00


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ....-..-+.+.+.||+.|.+||++....                           ...+.|+|.+||+++.++.|.++|
T Consensus       235 ~~~~~a~s~~~SFVGTAeYVSPElL~~~~---------------------------~~~~sDiWAlGCilyQmlaG~PPF  287 (604)
T KOG0592|consen  235 VDPNQASSRRSSFVGTAEYVSPELLNDSP---------------------------AGPSSDLWALGCILYQMLAGQPPF  287 (604)
T ss_pred             cCcccccCcccceeeeecccCHHHhcCCC---------------------------CCcccchHHHHHHHHHHhcCCCCC
Confidence            00000111247899999999999999875                           668899999999999999999999


Q ss_pred             cc
Q psy9736         226 YT  227 (400)
Q Consensus       226 ~~  227 (400)
                      ..
T Consensus       288 ra  289 (604)
T KOG0592|consen  288 RA  289 (604)
T ss_pred             cc
Confidence            74

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=95.68  E-value=0.0055  Score=59.77  Aligned_cols=45  Identities=16%  Similarity=0.186  Sum_probs=38.6

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...||..|+|||.+.+..                           +....|+|++|++++++++|..+|...
T Consensus       195 ~~~gt~~Y~APE~~~~~~---------------------------~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         195 STVGTPDYIAPEVFMQTG---------------------------YNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             ccCCCccccCHHHHcCCC---------------------------CCCcceeccccceeeecccCCCCCCCC
Confidence            456899999999988764                           567889999999999999999988653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	400
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		6e-53
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-21
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		7e-53
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-21
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-53
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-21
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-53
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-21
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-52
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-21
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-33
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-07
4fie_A	423	Full-Length Human Pak4 Length = 423		6e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		8e-33
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		5e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-32
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-32
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		5e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-32
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-32
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		5e-07
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		5e-32
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		9e-32
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-23
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-23
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-21
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-21
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-21
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-21
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-21
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-20
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-17
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-05
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-17
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		7e-05
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-17
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-17
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		7e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-17
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		9e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-08
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-14
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-14
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-07
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-14
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-07
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		2e-12
3gni_B	389	Structure Of Strad And Mo25 Length = 389		2e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-12
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-12
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-12
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-11
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-11
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-10
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-10
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-10
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-10
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		3e-10
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-10
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-10
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-10
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-10
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-10
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-10
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-10
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		4e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		5e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		5e-10
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		5e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		5e-10
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-10
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		5e-10
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-10
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-10
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-10
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-10
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		6e-10
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		6e-10
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-10
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		6e-10
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		6e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		6e-10
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		6e-10
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		6e-10
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-10
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		6e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-10
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-10
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		6e-10
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-10
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-10
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		7e-10
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-10
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		7e-10
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-10
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		7e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-10
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-10
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-10
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-10
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-10
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		7e-10
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-10
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		8e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		8e-10
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-10
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		9e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-10
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-09
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-09
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-09
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-09
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-09
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-09
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		3e-09
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-09
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-09
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-09
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		3e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-09
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-09
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-09
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		4e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-09
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		6e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-09
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		6e-09
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		9e-09
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		9e-09
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		9e-09
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		9e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-09
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		9e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-09
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		9e-09
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-08
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-08
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-08
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-08
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-08
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-08
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-08
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-08
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-08
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-08
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-08
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-08
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-08
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-08
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		5e-08
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-08
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-08
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		6e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-08
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		6e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-08
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-08
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-08
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-08
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		7e-08
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		8e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		8e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-08
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		8e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		8e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-08
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		9e-08
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		9e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		9e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		9e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		9e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-07
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-07
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-07
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-07
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-07
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-07
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		2e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-07
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		2e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-07
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		3e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-07
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		4e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		4e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-07
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		4e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-07
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-07
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		4e-07
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-07
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		5e-07
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		5e-07
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		6e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-07
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		7e-07
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-07
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		7e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		7e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-07
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		7e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		7e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		8e-07
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		8e-07
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		8e-07
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		9e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-06
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		1e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-06
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-06
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-06
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-06
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-06
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-06
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-06
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-06
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-06
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-06
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		3e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-06
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-06
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-06
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		4e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		4e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-06
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-06
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		5e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		5e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-06
1fvr_A	327	Tie2 Kinase Domain Length = 327		6e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-06
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		6e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		6e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-06
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		6e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-06
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		7e-06
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		7e-06
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		7e-06
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-06
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		7e-06
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		7e-06
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		7e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		7e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		7e-06
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		7e-06
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		7e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		8e-06
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		8e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		8e-06
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		8e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		8e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		8e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		8e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		8e-06
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		8e-06
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		8e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		8e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		8e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		8e-06
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		8e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		8e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		8e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		9e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		9e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		9e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		9e-06
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		9e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		9e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		9e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		9e-06
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		9e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		9e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		9e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-05
3soa_A	444	Full-Length Human Camkii Length = 444		1e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-05
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-05
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-05
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-05
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-05
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		4e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		5e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		5e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		5e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		6e-05
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		6e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		6e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		7e-05
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		7e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		7e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		7e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		7e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		7e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		7e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		8e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		8e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		8e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		8e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		8e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		8e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		8e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		8e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		8e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		8e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		8e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		8e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		8e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		8e-05
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-05
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		9e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		9e-05
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		9e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		9e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		1e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-04
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-04
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-04
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		2e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		3e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		3e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		3e-04
3e7e_A	365	Structure And Substrate Recruitment Of The Human Sp		3e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		4e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		4e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		4e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		4e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		4e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		4e-04
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		4e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		5e-04
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		5e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-04
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		6e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		7e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		7e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		8e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		9e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		9e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		9e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-04

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 97/109 (88%), Positives = 103/109 (94%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ + 
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SL
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 283 TPLIAAAKEATKNN 296

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  204 bits (519), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/109 (88%), Positives = 103/109 (94%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 54  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 113
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ + 
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 162

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  L++H FLKIA+PL+SL
Sbjct: 224 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSL 283
Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 284 TPLIAAAKEATKNN 297

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  204 bits (519), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/109 (88%), Positives = 103/109 (94%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ + 
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL+SL
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 283 TPLIAAAKEATKNN 296

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  204 bits (519), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/109 (88%), Positives = 103/109 (94%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ + 
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+SL
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSL 282
Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 283 TPLIAAAKEATKNN 296

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/109 (88%), Positives = 103/109 (94%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 54  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 113
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           MDEGQIAAVCRE LQALEFLHSNQVIHR+IKSDNILLG+DGSVKL+ + 
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFG 162

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  L++H FLKIA+PL+SL
Sbjct: 224 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSL 283
Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 284 TPLIAAAKEATKNN 297

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  138 bits (347), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 184 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 243
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS +         +  
Sbjct: 244 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303
Query: 146 SKVIIYCWDWTA 157
            K ++    W A
Sbjct: 304 RKXLVGTPYWMA 315

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 171 TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 231 EGGALTDIVTHTRMNEE 247

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 354 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 413
Query: 387 TPLI 390
            PL+
Sbjct: 414 VPLM 417

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  137 bits (346), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 107 MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 166
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS +         +  
Sbjct: 167 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226
Query: 146 SKVIIYCWDWTA 157
            K ++    W A
Sbjct: 227 RKXLVGTPYWMA 238

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 94  TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 154 EGGALTDIVTHTRMNEE 170

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 277 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 336
Query: 387 TPLI 390
            PL+
Sbjct: 337 VPLM 340

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 64  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 123
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS +         +  
Sbjct: 124 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 183
Query: 146 SKVIIYCWDWTA 157
            K ++    W A
Sbjct: 184 RKXLVGTPYWMA 195

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 51  TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 110
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 111 EGGALTDIVTHTRMNEE 127

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 234 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 293
Query: 387 TPLI 390
            PL+
Sbjct: 294 VPLM 297

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 57  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 116
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS +         +  
Sbjct: 117 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 176
Query: 146 SKVIIYCWDWTA 157
            K ++    W A
Sbjct: 177 RKXLVGTPYWMA 188

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 44  TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 103
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 104 EGGALTDIVTHTRMNEE 120

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 227 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 286
Query: 387 TPLI 390
            PL+
Sbjct: 287 VPLM 290

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 62  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 121
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS +         +  
Sbjct: 122 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 181
Query: 146 SKVIIYCWDWTA 157
            K ++    W A
Sbjct: 182 RKXLVGTPYWMA 193

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 49  TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 108
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 109 EGGALTDIVTHTRMNEE 125

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 232 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 291
Query: 387 TPLI 390
            PL+
Sbjct: 292 VPLM 295

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 85/109 (77%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V   +SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 53  MDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR 112
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           M+E QIAAVC  VLQAL  LH+  VIHRDIKSD+ILL  DG VKLS + 
Sbjct: 113 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 161

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           T  +SG +    +     + ++EL+ NE+++MR+ +H N+V   +SYLVG+ELW ++ +L
Sbjct: 40  TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99
Query: 216 DSYLVGEELWYTKPIEE 232
           +   + + + +T+  EE
Sbjct: 100 EGGALTDIVTHTRMNEE 116

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +A+ +I  N  P +K   K+S   + FLD+ L  +   RA+A+ LLKHPFL  A P AS+
Sbjct: 223 KAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASI 282
Query: 387 TPLI 390
            PL+
Sbjct: 283 VPLM 286

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  135 bits (339), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 85/109 (77%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V    SYLVGEELWV+ME+L GG+LTD+V++  
Sbjct: 78  MDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR 137
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++E QIA VC  VLQAL +LH+  VIHRDIKSD+ILL LDG VKLS + 
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG 186

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 174 EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL 215
           + ++EL+ NE+++MR+ +H N+V    SYLVGEELW ++ +L
Sbjct: 83  QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           PY F  S  QA+  +  +  P++K   K+S + +DFL++ L  + + RA+A  LL HPFL
Sbjct: 240 PY-FSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
Query: 378 KIARPLASLTPLI 390
                   L PLI
Sbjct: 299 LQTGLPECLVPLI 311

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  134 bits (337), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 84/109 (77%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+  H N+V+   SYLVG+ELWVVME+L GG+LTD+VT T 
Sbjct: 78  MDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR 137
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           M+E QIA VC  VL+AL +LH+  VIHRDIKSD+ILL  DG +KLS + 
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG 186

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 11/85 (12%)
Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ++G V  A E  TG +            ++EL+ NE+++MR+  H N+V+   SYLVG+E
Sbjct: 57  STGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDE 116
Query: 208 LWNIVNYLDSYLVGEELWYTKPIEE 232
           LW ++ +L+   + + + +T+  EE
Sbjct: 117 LWVVMEFLEGGALTDIVTHTRMNEE 141

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           QA+  I  +  P +K+  K+S + + FLD  L  E   RA+A  LL HPFLK+A P + +
Sbjct: 248 QAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCI 307
Query: 387 TPLI 390
            PL+
Sbjct: 308 VPLM 311

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 28/173 (16%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE------- 83
           Q   + ++ EI  M +  HPNIV+Y  S++V +ELW+VM+ L GGS+ D++         
Sbjct: 54  QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 84  --TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIAT 139
               +DE  IA + REVL+ LE+LH N  IHRD+K+ NILLG DGSV+++ +  + F+AT
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 140 KLYIEISKVI-----IYCW------------DWTAVASGTVYTAIESSTGMEP 175
              I  +KV        CW            D+ A       TAIE +TG  P
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 28/173 (16%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE------- 83
           Q   + ++ EI  M +  HPNIV+Y  S++V +ELW+VM+ L GGS+ D++         
Sbjct: 49  QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 84  --TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIAT 139
               +DE  IA + REVL+ LE+LH N  IHRD+K+ NILLG DGSV+++ +  + F+AT
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 140 KLYIEISKVI-----IYCW------------DWTAVASGTVYTAIESSTGMEP 175
              I  +KV        CW            D+ A       TAIE +TG  P
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE QIA + RE+
Sbjct: 69  QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
             +    +D  A       TAIE + G  P  EL   ++L +    +P
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 236

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE QIA + RE+
Sbjct: 54  QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
             +    +D  A       TAIE + G  P  EL   ++L +    +P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 221

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE QIA + RE+
Sbjct: 74  QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 133
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
             +    +D  A       TAIE + G  P  EL   ++L +    +P
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 241

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE QIA + RE+
Sbjct: 54  QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
             +    +D  A       TAIE + G  P  EL   ++L +    +P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP 221

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +   P I  Y  SYL   +LW++MEYL GGS  D++    ++E  IA + RE+
Sbjct: 66  QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREI 125
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVM 187
             +    +D+ A       TAIE + G  P  +L    +L +
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL 227

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 20/194 (10%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV 98
            EI V+ +     +  Y  SYL G +LW++MEYL GGS  D++     DE QIA + +E+
Sbjct: 70  QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS-------------KWNRFIATKLYIEI 145
           L+ L++LHS + IHRDIK+ N+LL   G VKL+             K N F+ T  ++  
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
             +    +D  A       TAIE + G  P  ++    +L +    +P         LVG
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PTLVG 242
Query: 206 EELWNIVNYLDSYL 219
           +   +   ++D+ L
Sbjct: 243 DFTKSFKEFIDACL 256

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCRE 97
           EI ++    HPNIV  LD++     LW+++E+  GG++  V+ E    + E QI  VC++
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            L AL +LH N++IHRD+K+ NIL  LDG +KL+ +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF 179

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 379
           L+  + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 243 LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCRE 97
           EI ++    HPNIV  LD++     LW+++E+  GG++  V+ E    + E QI  VC++
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            L AL +LH N++IHRD+K+ NIL  LDG +KL+ +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF 179

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 379
           L+  + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 243 LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCRE 97
           EI ++    HPNIV  LD++     LW+++E+  GG++  V+ E    + E QI  VC++
Sbjct: 84  EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            L AL +LH N++IHRD+K+ NIL  LDG +KL+ +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADF 179

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 323 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 379
           L+  + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 243 LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I EI ++    HP IV  L +Y    +LW+++E+ PGG++  ++ E    + E QI  VC
Sbjct: 64  IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 123
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R++L+AL FLHS ++IHRD+K+ N+L+ L+G ++L+ + 
Sbjct: 124 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG 162

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I EI ++    HP IV  L +Y    +LW+++E+ PGG++  ++ E    + E QI  VC
Sbjct: 56  IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC 115
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R++L+AL FLHS ++IHRD+K+ N+L+ L+G ++L+ + 
Sbjct: 116 RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG 154

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAV 94
           II EI +M++   P++V Y  SY    +LW+VMEY   GS++D++      + E +IA +
Sbjct: 71  IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI 130
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  L+ LE+LH  + IHRDIK+ NILL  +G  KL+ + 
Sbjct: 131 LQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG 170

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           PY  I   R A+++I TN  P  ++ E  S  F DF+ QCL +  E RA+A+ LL+HPF+
Sbjct: 224 PYADIHPMR-AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
Query: 378 KIARPLASLTPLIMAA 393
           + A+ ++ L  LI  A
Sbjct: 283 RSAKGVSILRDLINEA 298

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 32/173 (18%)
Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYL------VGEELWVVMEYLPGGSLTDVVTET- 84
           ++E I  EI ++++ + H NI  Y  +++      + ++LW+VME+   GS+TD++  T 
Sbjct: 63  EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 85  --CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL------------ 130
              + E  IA +CRE+L+ L  LH ++VIHRDIK  N+LL  +  VKL            
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 131 -SKWNRFIATKLYIEISKVIIYC-------WDWTAVASGTVYTAIESSTGMEP 175
             + N FI T  +  ++  +I C       +D+ +       TAIE + G  P
Sbjct: 183 VGRRNTFIGTPYW--MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P L  +   +AL+LI  N  P +K K K S+ FQ F++ CL +    R +   L+KHPF+
Sbjct: 232 PPLCDMHPMRALFLIPRNPAPRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
Query: 378 K 378
           +
Sbjct: 291 R 291

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           II E+  +++ +HPN + Y   YL     W+VMEY  G S +D+  V +  + E +IAAV
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAV 159
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIATKLYI 143
               LQ L +LHS+ +IHRD+K+ NILL   G VKL  +         N F+ T  ++
Sbjct: 160 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWM 217

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 251 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
Query: 378 KIARPLASLTPLIMAAKEAAK 398
              RP   +  LI   K+A +
Sbjct: 310 LRERPPTVIMDLIQRTKDAVR 330

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 12/118 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAV 94
           II E+  +++ +HPN + Y   YL     W+VMEY  G S +D+  V +  + E +IAAV
Sbjct: 62  IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAV 120
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW---------NRFIATKLYI 143
               LQ L +LHS+ +IHRD+K+ NILL   G VKL  +         N F+ T  ++
Sbjct: 121 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWM 178

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P LF ++   ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
Query: 378 KIARPLASLTPLIMAAKEAAK 398
              RP   +  LI   K+A +
Sbjct: 271 LRERPPTVIMDLIQRTKDAVR 291

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD---EGQIAAVC 95
            E+ V +   HPNIV Y  +++   ELWVV  ++  GS  D++    MD   E  IA + 
Sbjct: 59  GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYIL 118
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + VL+AL+++H    +HR +K+ +IL+ +DG V LS
Sbjct: 119 QGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 154

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD---EGQIAAVC 95
            E+ V +   HPNIV Y  +++   ELWVV  ++  GS  D++    MD   E  IA + 
Sbjct: 75  GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYIL 134
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + VL+AL+++H    +HR +K+ +IL+ +DG V LS
Sbjct: 135 QGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-- 83
           I+     ++E    E+ V+   KHPNIV Y +S+     L++VM+Y  GG L   +    
Sbjct: 59  ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK 118
Query: 84  -TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
                E QI     ++  AL+ +H  +++HRDIKS NI L  DG+V+L  +         
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
Query: 143 IEISKVII 150
           +E+++  I
Sbjct: 179 VELARACI 186

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM----DEGQIAAVC 95
           EI + +  KH NIV YL S+     + + ME +PGGSL+ ++         +E  I    
Sbjct: 55  EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWN 134
           +++L+ L++LH NQ++HRDIK DN+L+    G +K+S + 
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG 154

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM----DEGQIAAVC 95
           EI + +  KH NIV YL S+     + + ME +PGGSL+ ++         +E  I    
Sbjct: 69  EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWN 134
           +++L+ L++LH NQ++HRDIK DN+L+    G +K+S + 
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG 168

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 34  KELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQI 91
           +E    E  ++R+   HP+I+  +DSY     +++V + +  G L D +TE   + E + 
Sbjct: 143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET 202
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++ R +L+A+ FLH+N ++HRD+K +NILL  +  ++LS + 
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           NP +L +      +  E+ +M+   HPNIV   +     + L+++MEY  GG + D +V 
Sbjct: 51  NPTSLQK------LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA 104
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +  +  R+++ A+++ H  +++HRD+K++N+LL  D ++K++ + 
Sbjct: 105 HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 156

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           NP +L +      +  E+ +M+   HPNIV   +     + L+++MEY  GG + D +V 
Sbjct: 54  NPTSLQK------LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA 107
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +  +  R+++ A+++ H  +++HRD+K++N+LL  D ++K++ + 
Sbjct: 108 HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 159

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           NP +L +      +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V 
Sbjct: 54  NPTSLQK------LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 107
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +  A  R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 108 HGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFG 159

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +M+   HPNIV   +     + L++VMEY  GG + D +V    M E +  A  
Sbjct: 53  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-D 87
           A + K+  I NEI V+R+ KH NIV   D Y     L++VM+ + GG L D + E     
Sbjct: 59  ALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYT 118
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           E   + + R+VL A+ +LH   ++HRD+K +N+L
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLL 152

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETC--- 85
           + +K+++++E+ ++RE KHPNIV Y D  +      L++VMEY  GG L  V+T+     
Sbjct: 46  EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 86  --MDEGQIAAVCREVLQALEFLH-----SNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +DE  +  V  ++  AL+  H      + V+HRD+K  N+ L    +VKL  + 
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETC--- 85
           + +K+++++E+ ++RE KHPNIV Y D  +      L++VMEY  GG L  V+T+     
Sbjct: 46  EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 86  --MDEGQIAAVCREVLQALEFLH-----SNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +DE  +  V  ++  AL+  H      + V+HRD+K  N+ L    +VKL  + 
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETC--- 85
           + +K+++++E+ ++RE KHPNIV Y D  +      L++VMEY  GG L  V+T+     
Sbjct: 46  EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 86  --MDEGQIAAVCREVLQALEFLH-----SNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +DE  +  V  ++  AL+  H      + V+HRD+K  N+ L    +VKL  + 
Sbjct: 106 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K +N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 151

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L     +  D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K +N+L+  +G++KL+ + 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 150

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K +N+L+  +G++KL+ + 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 149

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K +N+L+  +G++KL+ + 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 149

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K +N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 148

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 57  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 155

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 57  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 155

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG +G +K++ + 
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG +G +K++ + 
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL 111
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 52  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 152

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAA 93
           E I NEI +++   HPNI+   D +   +  ++V E+  GG L + ++     DE   A 
Sbjct: 91  EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILL 122
           + +++L  + +LH + ++HRDIK +NILL
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILL 179

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 54  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 152

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 51  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            EI +    +HPNI+   + +   + +++++E+ P G L  ++      DE + A    E
Sbjct: 63  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + H  +VIHRDIK +N+L+G  G +K++ + 
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G +   + + +  DE + A    E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            EI +    +HPNI+   + +   + +++++E+ P G L  ++      DE + A    E
Sbjct: 64  REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + H  +VIHRDIK +N+L+G  G +K++ + 
Sbjct: 124 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G +   + + +  DE + A    E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-D 87
           A + K+  + NEI V+ + KHPNIV   D Y  G  L+++M+ + GG L D + E     
Sbjct: 55  ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           E   + +  +VL A+++LH   ++HRD+K +N+L
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-T 78
           K+L     L ++ +K ++    ++++  KHP +V    S+   ++L+ V++Y+ GG L  
Sbjct: 69  KVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 128
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            +  E C  E +      E+  AL +LHS  +++RD+K +NILL   G + L+ +
Sbjct: 129 HLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDF 183

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 156

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 83  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 155

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 56  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 116 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 152

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-D 87
           A + K+  + NEI V+ + KHPNIV   D Y  G  L+++M+ + GG L D + E     
Sbjct: 55  ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           E   + +  +VL A+++LH   ++HRD+K +N+L
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 59  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 83  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y+  + L +V ++  G SL     V ET     Q+  + R
Sbjct: 81  NEVAVLRKTRHVNILLFM-GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR 139
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L    +VK+  + 
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFG 177

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 74  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 133
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 134 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 170

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-D 87
           A + K+  + NEI V+ + KHPNIV   D Y  G  L+++M+ + GG L D + E     
Sbjct: 55  ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           E   + +  +VL A+++LH   ++HRD+K +N+L
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 61  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-D 87
           A + K+  + NEI V+ + KHPNIV   D Y  G  L+++M+ + GG L D + E     
Sbjct: 55  ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
           E   + +  +VL A+++LH   ++HRD+K +N+L
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 58  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM-DEGQIAAVCRE 97
           NEI V+++ KH NIV   D Y      ++VM+ + GG L D + E  +  E   + V ++
Sbjct: 55  NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           VL A+++LH N ++HRD+K +N+L
Sbjct: 115 VLSAVKYLHENGIVHRDLKPENLL 138

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 54  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 114 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 62  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVCREVLQALEFL 105
           +HP + +   ++   E L+ VMEYL GG L   + ++C   D  +      E++  L+FL
Sbjct: 76  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFL 134
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           HS  +++RD+K DNILL  DG +K++ + 
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFG 163

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 60  REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVCREVLQALEFL 105
           +HP + +   ++   E L+ VMEYL GG L   + ++C   D  +      E++  L+FL
Sbjct: 77  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFL 135
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           HS  +++RD+K DNILL  DG +K++ +
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADF 163

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI+   + +      ++V E   GG L D +++    
Sbjct: 70  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 129
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + ++H N+++HRD+K +N+LL
Sbjct: 130 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL   +  +ET  +  ++  + R
Sbjct: 69  NEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW------NRFIATKLYIEISKVII 150
           +  + +++LH+  +IHRD+KS+NI L  D +VK+  +      +R+  +  + ++S  I+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 151 Y 151
           +
Sbjct: 188 W 188

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCRE 97
            E+ +    +HPNI+     +     +++++EY P G++   + + +  DE + A    E
Sbjct: 57  REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL + HS +VIHRDIK +N+LLG  G +K++ + 
Sbjct: 117 LANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ E   + E  +  V 
Sbjct: 61  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS 120
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             VL+ L +L   +Q++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 180

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E++     +  D    T +    I +  
Sbjct: 49  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 42  LVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQ 100
           +++R  +HPNI+   D Y  G+ ++VV E + GG L D ++ +    E + +AV   + +
Sbjct: 68  ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 101 ALEFLHSNQVIHRDIKSDNIL 121
            +E+LH+  V+HRD+K  NIL
Sbjct: 128 TVEYLHAQGVVHRDLKPSNIL 148

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI+   + +      ++V E   GG L D +++    
Sbjct: 64  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + ++H N+++HRD+K +N+LL
Sbjct: 124 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI+   + +      ++V E   GG L D +++    
Sbjct: 87  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 146
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + ++H N+++HRD+K +N+LL
Sbjct: 147 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI+   + +      ++V E   GG L D +++    
Sbjct: 88  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 147
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + ++H N+++HRD+K +N+LL
Sbjct: 148 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E++        D    T +    I +  
Sbjct: 53  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL 112
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ + 
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 39  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 97
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 98  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 153

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 31  QPKK--ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTETCM 86
           QP+   E +  EI ++++  HPN+V  ++      E  L++V E +  G + +V T   +
Sbjct: 75  QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            E Q     +++++ +E+LH  ++IHRDIK  N+L+G DG +K++ + 
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 36  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 36  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL   +  +ET  +  ++  + R
Sbjct: 69  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW------NRFIATKLYIEISKVII 150
           +  + +++LH+  +IHRD+KS+NI L  D +VK+  +      +R+  +  + ++S  I+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 151 Y 151
           +
Sbjct: 188 W 188

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL   +  +ET  +  ++  + R
Sbjct: 57  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 115
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW------NRFIATKLYIEISKVII 150
           +  + +++LH+  +IHRD+KS+NI L  D +VK+  +      +R+  +  + ++S  I+
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 151 Y 151
           +
Sbjct: 176 W 176

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 36  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 36  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ + +   HPNIV   +     + L++V EY  GG + D +V      E +  A  
Sbjct: 60  LFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           R+++ A+++ H   ++HRD+K++N+LL  D ++K++ + 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFG 158

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 36  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 94
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 95  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++  +HP +     ++   + L  VMEY  GG L  
Sbjct: 41  KILRKEVIIAKDEVAH-TVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 99
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K++ + 
Sbjct: 100 HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 155

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 53  NEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 111
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 54  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 113
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYM 173
Query: 144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHP 193
              ++    +   +       + +E + G  P+  + I E+L    N+ P
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPP 223

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----TETCMDEGQIA 92
           I EI ++++  HPN++ Y  S++   EL +V+E    G L+ ++      +  + E  + 
Sbjct: 80  IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK--WNRFIATK 140
               ++  ALE +HS +V+HRDIK  N+ +   G VKL      RF ++K
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 42  LVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQ 100
           +++R  +HPNI+   D Y  G+ ++VV E   GG L D ++ +    E + +AV   + +
Sbjct: 68  ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 101 ALEFLHSNQVIHRDIKSDNIL 121
            +E+LH+  V+HRD+K  NIL
Sbjct: 128 TVEYLHAQGVVHRDLKPSNIL 148

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L+  + +  +  K+    EI VM + +H N+V  L     G++L +V  Y+P GSL D
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 80  VVTETCMDEG------QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            +  +C+D            + +     + FLH N  IHRDIKS NILL    + K+S +
Sbjct: 120 RL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 134 NRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTG-MEPKKEL---------IINE 183
               A++ + +           + +   T Y A E+  G + PK ++         II  
Sbjct: 178 GLARASEKFAQTVMX-------SRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
Query: 184 ILVMRENKHPNIV 196
           +  + E++ P ++
Sbjct: 231 LPAVDEHREPQLL 243

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K ++ P  L     K  + NEI +M +  HP ++N  D++    E+ +++E+L GG L D
Sbjct: 82  KFINTPYPL----DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 137
Query: 80  VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI 137
            +   +  M E ++    R+  + L+ +H + ++H DIK +NI+     +  +   +  +
Sbjct: 138 RIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL 197
Query: 138 ATKL 141
           ATKL
Sbjct: 198 ATKL 201

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-----CMDEG 89
           E I  EI V++   HPNI+   + +     +++VME   GG L + +         + EG
Sbjct: 65  EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            +A + ++++ AL + HS  V+H+D+K +NIL 
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILF 157

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDE 88
           Q  +E  + E+ ++R+ + HPNI+   D+Y      ++V + +  G L D +TE   + E
Sbjct: 64  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +   + R +L+ +  LH   ++HRD+K +NILL  D ++KL+ + 
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 169

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L+  + +  +  K+    EI VM + +H N+V  L     G++L +V  Y+P GSL D
Sbjct: 54  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 113
Query: 80  VVTETCMDEG------QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            +  +C+D            + +     + FLH N  IHRDIKS NILL    + K+S +
Sbjct: 114 RL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDF 171
Query: 134 NRFIATKLYIE 144
               A++ + +
Sbjct: 172 GLARASEKFAQ 182

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 55  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 113
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 151

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L+  + +  +  K+    EI VM + +H N+V  L     G++L +V  Y+P GSL D
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 80  VVTETCMDEG------QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            +  +C+D            + +     + FLH N  IHRDIKS NILL    + K+S +
Sbjct: 120 RL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 134 NRFIATKLYIE 144
               A++ + +
Sbjct: 178 GLARASEKFAQ 188

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 42  LVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQ 100
           +++R  +HPNI+   D Y  G+ +++V E + GG L D ++ +    E + + V   + +
Sbjct: 73  ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK 132
Query: 101 ALEFLHSNQVIHRDIKSDNIL 121
            +E+LHS  V+HRD+K  NIL
Sbjct: 133 TVEYLHSQGVVHRDLKPSNIL 153

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQA 101
           ++ E KHP IV+ + ++  G +L++++EYL GG L   +  E    E        E+  A
Sbjct: 74  ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           L  LH   +I+RD+K +NI+L   G VKL+ + 
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDE 88
           Q  +E  + E+ ++R+ + HPNI+   D+Y      ++V + +  G L D +TE   + E
Sbjct: 64  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123
Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +   + R +L+ +  LH   ++HRD+K +NILL  D ++KL+ + 
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 169

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQA 101
           ++ E KHP IV+ + ++  G +L++++EYL GG L   +  E    E        E+  A
Sbjct: 74  ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           L  LH   +I+RD+K +NI+L   G VKL+ + 
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG 166

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDE 88
           Q  +E  + E+ ++R+ + HPNI+   D+Y      ++V + +  G L D +TE   + E
Sbjct: 51  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 110
Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +   + R +L+ +  LH   ++HRD+K +NILL  D ++KL+ + 
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 156

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 53  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 111
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 58  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 116
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 58  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 116
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 53  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 111
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 73  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 131
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 169

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 42  LVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQ 100
           +++R  +HPNI+   D Y  G+ +++V E + GG L D ++ +    E + + V   + +
Sbjct: 73  ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK 132
Query: 101 ALEFLHSNQVIHRDIKSDNIL 121
            +E+LHS  V+HRD+K  NIL
Sbjct: 133 TVEYLHSQGVVHRDLKPSNIL 153

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 80  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 138
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 176

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 81  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW------NRFIATKLYIEISKVII 150
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  +      +R+  +  + ++S  I+
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 151 Y 151
           +
Sbjct: 200 W 200

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCR 96
           NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL     + ET  +  ++  + R
Sbjct: 81  NEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  Q +++LH+  +IHRD+KS+NI L  D +VK+  + 
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI    + +      ++V E   GG L D +++    
Sbjct: 64  VKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + + H N+++HRD+K +N+LL
Sbjct: 124 SEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 172
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 173 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 232

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
           KKE+++         +E L++    HP I+    ++   ++++++M+Y+ GG L  ++ +
Sbjct: 40  KKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK 99
Query: 84  TCMDEGQIAAV-CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +      +A     EV  ALE+LHS  +I+RD+K +NILL  +G +K++ + 
Sbjct: 100 SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG 151

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K  S+P    +  K+E  I  +L     KHP+IV  L++Y     L++V E++ G  L  
Sbjct: 61  KFTSSPGLSTEDLKREASICHML-----KHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 80  VVTETC-----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
            + +         E   +   R++L+AL + H N +IHRD+K +N+LL 
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLA 164

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L    +    ++V EY+P G+L D + E C  E   A V
Sbjct: 73  EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE-CNREEVTAVV 131
Query: 95  ----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                 ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 132 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFG 175

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+LS    + ++        E  +M     P +V    ++     L++VMEY+PGG L +
Sbjct: 105 KLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN 163
Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +++   + E        EV+ AL+ +HS   IHRD+K DN+LL   G +KL+ +
Sbjct: 164 LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++RE +HPNI+   D +    ++ +++E + GG L D + E   + E +  
Sbjct: 59  REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS ++ H D+K +NI+L LD +V
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIML-LDKNV 153

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++RE +HPNI+   D +    ++ +++E + GG L D + E   + E +  
Sbjct: 52  REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS ++ H D+K +NI+L LD +V
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIML-LDKNV 146

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        +
Sbjct: 70  TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           +L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T 
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 158 VA 159
           +A
Sbjct: 189 LA 190

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+LS    + ++        E  +M     P +V    ++   + L++VMEY+PGG L +
Sbjct: 106 KLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN 164
Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +++   + E        EV+ AL+ +HS  +IHRD+K DN+LL   G +KL+ + 
Sbjct: 165 LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+LS    + ++        E  +M     P +V    ++     L++VMEY+PGG L +
Sbjct: 100 KLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN 158
Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +++   + E        EV+ AL+ +HS   IHRD+K DN+LL   G +KL+ +
Sbjct: 159 LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 78  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 137
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 138 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 197

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           L +   K+++  EI V+    HPNI+   + +    E+ +V+E + GG L D +V +   
Sbjct: 86  LKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY 145
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
            E   A   +++L+A+ +LH N ++HRD+K +N+L
Sbjct: 146 SERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+LS    + ++        E  +M     P +V    ++     L++VMEY+PGG L +
Sbjct: 105 KLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN 163
Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +++   + E        EV+ AL+ +HS   IHRD+K DN+LL   G +KL+ +
Sbjct: 164 LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        +
Sbjct: 64  TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           +L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T 
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 158 VA 159
           +A
Sbjct: 183 LA 184

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 51  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        +
Sbjct: 64  TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           +L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T 
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 158 VA 159
           +A
Sbjct: 183 LA 184

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 50  PNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSN 108
           P IV    +   G  + + ME L GGSL  +V E  C+ E +      + L+ LE+LHS 
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 185
Query: 109 QVIHRDIKSDNILLGLDGS 127
           +++H D+K+DN+LL  DGS
Sbjct: 186 RILHGDVKADNVLLSSDGS 204

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        +
Sbjct: 63  TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           +L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T 
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 158 VA 159
           +A
Sbjct: 182 LA 183

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        +
Sbjct: 64  TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           +L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T 
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 158 VA 159
           +A
Sbjct: 183 LA 184

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++RE +HPNI+   D +    ++ +++E + GG L D + E   + E +  
Sbjct: 73  REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS ++ H D+K +NI+L LD +V
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIML-LDKNV 167

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 51  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 50  PNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSN 108
           P IV    +   G  + + ME L GGSL  +V E  C+ E +      + L+ LE+LHS 
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR 204
Query: 109 QVIHRDIKSDNILLGLDGS 127
           +++H D+K+DN+LL  DGS
Sbjct: 205 RILHGDVKADNVLLSSDGS 223

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 51  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQIA 92
           K++ + EI ++++ KHPN+VN L+ +     L +V EY     L ++   +  + E  + 
Sbjct: 46  KKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK 105
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++  + LQA+ F H +  IHRD+K +NIL+     +KL  + 
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFG 147

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 51  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 51  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 170

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           I  EI  ++  +HP+I+          ++++VMEY+ GG L D + +   +DE +   + 
Sbjct: 63  IRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLF 122
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +++L  +++ H + V+HRD+K +N+LL    + K++ + 
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 161

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           +  E+ +M+  +HP +VN   S+   E++++V++ L GG L   + +     E  +    
Sbjct: 62  VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI 121
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            E++ AL++L + ++IHRD+K DNILL   G V ++ +N
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFN 160

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQI-AAVC 95
           II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +      QI   V 
Sbjct: 70  IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 129
Query: 96  REVLQALEFLH-SNQVIHRDIKSDNILLGLDGSVKLSKW-----------NRFIATKLYI 143
             V++ L +L   ++++HRD+K  NIL+   G +KL  +           N F+ T+ Y+
Sbjct: 130 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYM 189

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREV 98
           EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        ++
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV 158
           L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T +
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308
Query: 159 A 159
           A
Sbjct: 309 A 309

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREV 98
           EI ++++  HP I+  + ++   E+ ++V+E + GG L D VV    + E        ++
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV 158
           L A+++LH N +IHRD+K +N+LL       L K   F  +K+  E S +   C   T +
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 322
Query: 159 A 159
           A
Sbjct: 323 A 323

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +++E+ V+++  HPNI+   + +      ++VME   GG L D ++      E   A + 
Sbjct: 68  LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILL 122
           ++VL    +LH + ++HRD+K +N+LL
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLL 154

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCRE 97
            EI +     HPNI+   + +     +++++EY P G L   + ++C  DE + A +  E
Sbjct: 72  REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEE 131
Query: 98  VLQALEFLHSNQVIHRDIKSDN 119
           +  AL + H  +VIHRDIK +N
Sbjct: 132 LADALMYCHGKKVIHRDIKPEN 153

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI +M+   HPNI+   +++    ++++VME   GG L + VV +    E   A + ++
Sbjct: 72  QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 131
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLD 125
           VL A+ + H   V HRD+K +N L   D
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTD 159

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCRE 97
            EI +M+   HPNI+   +++    ++++VME   GG L + VV +    E   A + ++
Sbjct: 55  QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 114
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLD 125
           VL A+ + H   V HRD+K +N L   D
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTD 142

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L+  + +  +  K+    EI V  + +H N+V  L     G++L +V  Y P GSL D
Sbjct: 51  KKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLD 110
Query: 80  VVTETCMDEG------QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++  C+D            + +     + FLH N  IHRDIKS NILL    + K+S +
Sbjct: 111 RLS--CLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDF 168
Query: 134 NRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTG-MEPKKEL---------IINE 183
               A++ + +           + +   T Y A E+  G + PK ++         II  
Sbjct: 169 GLARASEKFAQXVXX-------SRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
Query: 184 ILVMRENKHPNIV 196
           +  + E++ P ++
Sbjct: 222 LPAVDEHREPQLL 234

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           ++ E+ V++   HPNI+   D +      ++VME   GG L D ++     +E   A + 
Sbjct: 83  LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII 142
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILL 122
           ++VL  + +LH + ++HRD+K +N+LL
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLL 169

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           I E+ V+R     +HPN+V   D   V       +L +V E++     T  D V E  + 
Sbjct: 59  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +KL+ +         + ++ 
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 178
Query: 148 VIIYCW 153
           V++  W
Sbjct: 179 VVVTLW 184

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           I E+ V+R     +HPN+V   D   V       +L +V E++     T  D V E  + 
Sbjct: 59  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +KL+ +         + ++ 
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 178
Query: 148 VIIYCW 153
           V++  W
Sbjct: 179 VVVTLW 184

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 20  KILSNPITLAQQPKKELIINE--ILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
           K+L   + L Q    E  + E  IL +  N HP +      +   + L+ VME++ GG L
Sbjct: 54  KVLKKDVIL-QDDDVECTMTEKRILSLARN-HPFLTQLFCCFQTPDRLFFVMEFVNGGDL 111
Query: 78  TDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              + ++   DE +      E++ AL FLH   +I+RD+K DN+LL  +G  KL+ + 
Sbjct: 112 MFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG 169

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 49  HPNIVNYLDS----YLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALE 103
           HP IV   D+       G   ++VMEY+ G +L D+V TE  M   +   V  +  QAL 
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           F H N +IHRD+K  NIL+    +VK+  +   R IA
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA 167

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E +  EI+  R  +HPNIV + +  L    L ++MEY  GG L + +       E +   
Sbjct: 61  ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF 120
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             +++L  + + HS Q+ HRD+K +N L  LDGS
Sbjct: 121 FFQQLLSGVSYCHSMQICHRDLKLENTL--LDGS 152

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +++E+ V+++  HPNI+   + +      ++VME   GG L D ++      E   A + 
Sbjct: 51  LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILL 122
           ++VL    +LH + ++HRD+K +N+LL
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLL 137

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           I E+ V+R     +HPN+V   D   V       +L +V E++     T  D V E  + 
Sbjct: 59  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +KL+ +         + ++ 
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 178
Query: 148 VIIYCW 153
           V++  W
Sbjct: 179 VVVTLW 184

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 49  HPNIVNYLDS----YLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALE 103
           HP IV   D+       G   ++VMEY+ G +L D+V TE  M   +   V  +  QAL 
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           F H N +IHRD+K  NI++    +VK+  +   R IA
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 49  HPNIVNYLDS----YLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALE 103
           HP IV   D+       G   ++VMEY+ G +L D+V TE  M   +   V  +  QAL 
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           F H N +IHRD+K  NI++    +VK+  +   R IA
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 49  HPNIVNYLDS----YLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALE 103
           HP IV   D+       G   ++VMEY+ G +L D+V TE  M   +   V  +  QAL 
Sbjct: 71  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           F H N +IHRD+K  NI++    +VK+  +   R IA
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCR 96
           + E++       P IV    +   G  + + ME L GGSL  ++ +  C+ E +      
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 173
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           + L+ LE+LH+ +++H D+K+DN+LL  DGS
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSSDGS 204

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCR 96
           + E++       P IV    +   G  + + ME L GGSL  ++ +  C+ E +      
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 171
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           + L+ LE+LH+ +++H D+K+DN+LL  DGS
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSSDGS 202

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           N   LA+   +  I  EI  +R  +HP+I+   D     +E+ +V+EY  G  L D +V 
Sbjct: 38  NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ 96
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +     ++++ A+E+ H ++++HRD+K +N+LL    +VK++ + 
Sbjct: 97  RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 148

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCR 96
           + E++       P IV    +   G  + + ME L GGSL  ++ +  C+ E +      
Sbjct: 98  VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG 157
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           + L+ LE+LH+ +++H D+K+DN+LL  DGS
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSSDGS 188

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  GG L  
Sbjct: 39  KILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 97
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ + 
Sbjct: 98  HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 154

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           N   LA+   +  I  EI  +R  +HP+I+   D     +E+ +V+EY  G  L D +V 
Sbjct: 48  NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ 106
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +     ++++ A+E+ H ++++HRD+K +N+LL    +VK++ + 
Sbjct: 107 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 158

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  GG L  
Sbjct: 40  KILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 98
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ + 
Sbjct: 99  HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 155

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           N   LA+   +  I  EI  +R  +HP+I+   D     +E+ +V+EY  G  L D +V 
Sbjct: 47  NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ 105
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +     ++++ A+E+ H ++++HRD+K +N+LL    +VK++ + 
Sbjct: 106 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 157

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  GG L  
Sbjct: 41  KILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 99
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ + 
Sbjct: 100 HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 156

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 24  NPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVT 82
           N   LA+   +  I  EI  +R  +HP+I+   D     +E+ +V+EY  G  L D +V 
Sbjct: 42  NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ 100
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              M E +     ++++ A+E+ H ++++HRD+K +N+LL    +VK++ + 
Sbjct: 101 RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG 152

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 49  HPNIVNYLDS----YLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALE 103
           HP IV   D+       G   ++VMEY+ G +L D+V TE  M   +   V  +  QAL 
Sbjct: 88  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 147
Query: 104 FLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           F H N +IHRD+K  NI++    +VK+  +   R IA
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 184

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E +  EI+  R  +HPNIV + +  L    L +VMEY  GG L + +       E +   
Sbjct: 60  ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             ++++  + + H+ QV HRD+K +N L  LDGS
Sbjct: 120 FFQQLISGVSYAHAMQVAHRDLKLENTL--LDGS 151

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-- 83
           +    +  KE +  EI  M   +HP +VN  D++    E+ ++ E++ GG L + V +  
Sbjct: 190 VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 249
Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
             M E +     R+V + L  +H N  +H D+K +NI+ 
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 288

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  GG L  
Sbjct: 182 KILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 240
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ + 
Sbjct: 241 HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 297

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT- 78
           KIL   + +A+       + E  V++ ++HP +     S+   + L  VMEY  GG L  
Sbjct: 179 KILKKEVIVAKDEVAH-TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 237
Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKLSKWN 134
            +  E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K++ + 
Sbjct: 238 HLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 294

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-- 83
           +    +  KE +  EI  M   +HP +VN  D++    E+ ++ E++ GG L + V +  
Sbjct: 84  VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 143
Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
             M E +     R+V + L  +H N  +H D+K +NI+ 
Sbjct: 144 NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 182

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E +  EI+  R  +HPNIV + +  L    L +VMEY  GG L + +       E +   
Sbjct: 60  ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             ++++  + + H+ QV HRD+K +N L  LDGS
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTL--LDGS 151

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E +  EI+  R  +HPNIV + +  L    L +VMEY  GG L + +       E +   
Sbjct: 59  ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 118
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             ++++  + + H+ QV HRD+K +N L  LDGS
Sbjct: 119 FFQQLISGVSYCHAMQVCHRDLKLENTL--LDGS 150

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I EI +++E  HPNIV+ +D       L +V E++    L  V+ E  T + + QI    
Sbjct: 67  IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYL 125
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++L+ +   H ++++HRD+K  N+L+  DG++KL+ + 
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG 164

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E +  EI+  R  +HPNIV + +  L    L +VMEY  GG L + +       E +   
Sbjct: 60  ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
             ++++  + + H+ QV HRD+K +N L  LDGS
Sbjct: 120 FFQQLISGVSYCHAMQVCHRDLKLENTL--LDGS 151

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 57  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 151

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 57  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 151

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K  S+P    +  K+E  I  +L     KHP+IV  L++Y     L++V E++ G  L  
Sbjct: 63  KFTSSPGLSTEDLKREASICHML-----KHPHIVELLETYSSDGMLYMVFEFMDGADLCF 117
Query: 80  VVTETC-----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + +         E   +   R++L+AL + H N +IHRD+K   +LL
Sbjct: 118 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I EI +++E  HPNIV+ +D       L +V E++    L  V+ E  T + + QI    
Sbjct: 67  IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYL 125
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++L+ +   H ++++HRD+K  N+L+  DG++KL+ + 
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG 164

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K  S+P    +  K+E  I  +L     KHP+IV  L++Y     L++V E++ G  L  
Sbjct: 61  KFTSSPGLSTEDLKREASICHML-----KHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115
Query: 80  VVTETC-----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
            + +         E   +   R++L+AL + H N +IHRD+K   +LL 
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 49  HPNIVNYLDSYLVGEE-------LWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQ 100
           HP IV     Y  GE         ++VMEY+ G +L D+V TE  M   +   V  +  Q
Sbjct: 71  HPAIVAV---YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 101 ALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIA 138
           AL F H N +IHRD+K  NI++    +VK+  +   R IA
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           I  EI  ++  +HP+I+          + ++VMEY+ GG L D + +   ++E +   + 
Sbjct: 58  IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +++L A+++ H + V+HRD+K +N+LL    + K++ + 
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  HPNI+   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +  +++L  + +LH+ ++ H D+K +NI+L LD ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNI 153

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 83  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 141
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVCREV 98
           EI+  R  +HPNIV + +  L    L +VMEY  GG L + +       E +     +++
Sbjct: 65  EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           +  + + H+ QV HRD+K +N L  LDGS
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTL--LDGS 151

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAAVC 95
           I  EI  ++  +HP+I+          + ++VMEY+ GG L D + +   ++E +   + 
Sbjct: 58  IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +++L A+++ H + V+HRD+K +N+LL    + K++ + 
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 55  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            +ILV  E  HP IV    ++    +L++++++L GG L T +  E    E  +     E
Sbjct: 77  RDILV--EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL+ LHS  +I+RD+K +NILL  +G +KL+ + 
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 55  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 57  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 115
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 60  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 118
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEE---LWVVMEYLPGG--SLTDVVTETCMDEGQI 91
           +  EI ++R  +H N++  +D  L  EE   +++VMEY   G   + D V E      Q 
Sbjct: 53  VKKEIQLLRRLRHKNVIQLVD-VLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                +++  LE+LHS  ++H+DIK  N+LL   G++K+S
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 52  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 110
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 39  NEILVMRENKHPNIVNYLDSYL-VGEE-LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
            EI ++R   H +IV Y       GE+ + +VMEY+P GSL D +   C+   Q+    +
Sbjct: 59  REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 118
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ + + +LH+   IHR + + N+LL  D  VK+  + 
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFG 156

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 39  NEILVMRENKHPNIVNYLDSYL-VGEE-LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
            EI ++R   H +IV Y       GE+ + +VMEY+P GSL D +   C+   Q+    +
Sbjct: 60  REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 119
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ + + +LH+   IHR + + N+LL  D  VK+  + 
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFG 157

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 58  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASL 116
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 39  NEILVMRENKHPNIVNYLDSY--LVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
            EI ++R   H +I+ Y           L +VMEY+P GSL D +    +   Q+    +
Sbjct: 82  QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 141
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ + + +LH+   IHRD+ + N+LL  D  VK+  + 
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG 179

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 435 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++    Y + SK
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            +ILV  E  HP IV    ++    +L++++++L GG L T +  E    E  +     E
Sbjct: 77  RDILV--EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL+ LHS  +I+RD+K +NILL  +G +KL+ + 
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P ++  +P +KE +  EI + +   +P++V +   +   + ++VV+E     SL ++   
Sbjct: 76  PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR 135
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+ +Q +++LH+N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG--LATKIE 193
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 194 FDGERKKTLCGTPNYIA 210

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            +ILV  E  HP IV    ++    +L++++++L GG L T +  E    E  +     E
Sbjct: 78  RDILV--EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           +  AL+ LHS  +I+RD+K +NILL  +G +KL+ + 
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 172

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMD 87
           A+      I+ E+ ++++  HPNI+   +        ++V E   GG L D ++      
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           E   A + ++V   + ++H + ++HRD+K +NILL
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 55  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+     VKL  +  +R++    Y + SK
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P ++  +P +KE +  EI + +   +P++V +   +   + ++VV+E     SL ++   
Sbjct: 76  PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR 135
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+ +Q +++LH+N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG--LATKIE 193
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 194 FDGERKKXLCGTPNYIA 210

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMD 87
           A+      I+ E+ ++++  HPNI+   +        ++V E   GG L D ++      
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           E   A + ++V   + ++H + ++HRD+K +NILL
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEE------------LWVVMEYLPGGSLTDVV 81
           +E ++ E+  + + +HP IV Y +++L                L++ M+     +L D +
Sbjct: 47  REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 82  TETCMDEGQIAAVCREVL----QALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              C  E +  +VC  +     +A+EFLHS  ++HRD+K  NI   +D  VK+  + 
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 163

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEEL-WVVMEYLPGGSLTDVVT--ETC--MDEG 89
           EI +M++  HPN+V+  +       L   +L  + MEY  GG L   +   E C  + EG
Sbjct: 63  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            I  +  ++  AL +LH N++IHRD+K +NI+L
Sbjct: 123 PIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM--DEGQIAAVC 95
           + EI +++E  HPNI+  LD++     + +V +++    L  ++ +  +      I A  
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM 118
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              LQ LE+LH + ++HRD+K +N+LL  +G +KL+ + 
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFG 157

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEEL-WVVMEYLPGGSLTDVVT--ETC--MDEG 89
           EI +M++  HPN+V+  +       L   +L  + MEY  GG L   +   E C  + EG
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            I  +  ++  AL +LH N++IHRD+K +NI+L
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            E  + R+ +HPNIV   DS       ++V + + GG L  D+V      E   +   ++
Sbjct: 54  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLG 123
           +L+++ + HSN ++HR++K +N+LL 
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLA 139

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 435 REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASL 493
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+     VKL  +  +R++    Y + SK
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMD 87
           A+      I+ E+ ++++  HPNI+   +        ++V E   GG L D ++      
Sbjct: 60  AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS 119
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           E   A + ++V   + ++H + ++HRD+K +NILL
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 16/120 (13%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREV 98
           E  + R+ +HPNIV   DS       ++V + + GG L  D+V      E   +   +++
Sbjct: 78  EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSK------------WNRFIATKLYI 143
           L+++ + HSN ++HR++K +N+LL       +VKL+             W+ F  T  Y+
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 197

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC----MDEGQIA 92
            + E+ +M+  +HPNIV ++ +      L +V EYL  GSL  ++ ++     +DE +  
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 93  AVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKL 130
           ++  +V + + +LH+    ++HRD+KS N+L+    +VK+
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKV 180

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            E  + R+ +HPNIV   DS       ++V + + GG L  D+V      E   +   ++
Sbjct: 54  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 113
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLG 123
           +L+++ + HSN ++HR++K +N+LL 
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLA 139

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            E  + R+ +HPNIV   DS       ++V + + GG L  D+V      E   +   ++
Sbjct: 53  REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ 112
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLG 123
           +L+++ + HSN ++HR++K +N+LL 
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLA 138

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ ++ E + GG L D + E   + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
              +++L  + +LHS Q+ H D+K +NI+L LD +V
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML-LDRNV 152

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P ++  +P +KE +  EI + +   +P++V +   +   + ++VV+E     SL ++   
Sbjct: 76  PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR 135
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+ +Q +++LH+N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 136 RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG--LATKIE 193
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 194 FDGERKKDLCGTPNYIA 210

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 39  NEILVMRENKHPNIVNYLDSYL-VGEE-LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
            EI ++R   H +I+ Y       GE+ L +VMEY+P GSL D +    +   Q+    +
Sbjct: 65  QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ + + +LHS   IHR++ + N+LL  D  VK+  + 
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFG 162

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 57  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 116
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 117 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 141 LYI 143
            Y+
Sbjct: 177 QYV 179

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P ++  +P +KE +  EI + +   +P++V +   +   + ++VV+E     SL ++   
Sbjct: 60  PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR 119
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+ +Q +++LH+N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 120 RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG--LATKIE 177
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 178 FDGERKKDLCGTPNYIA 194

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 56  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 115
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 116 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 141 LYI 143
            Y+
Sbjct: 176 QYV 178

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 54  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 113
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 114 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 141 LYI 143
            Y+
Sbjct: 174 QYV 176

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 80  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 141 LYI 143
            Y+
Sbjct: 200 QYV 202

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 77  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 141 LYI 143
            Y+
Sbjct: 197 QYV 199

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 55  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 115 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 141 LYI 143
            Y+
Sbjct: 175 QYV 177

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 80  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 139
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 141 LYI 143
            Y+
Sbjct: 200 QYV 202

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 82  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 141
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 201
Query: 141 LYI 143
            Y+
Sbjct: 202 QYV 204

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 77  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 141 LYI 143
            Y+
Sbjct: 197 QYV 199

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 77  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 141 LYI 143
            Y+
Sbjct: 197 QYV 199

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDE----G 89
           +   + E+ VMR  +HPN++ ++      + L  + EY+ GG+L  ++    MD      
Sbjct: 51  QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWS 108
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           Q  +  +++   + +LHS  +IHRD+ S N L+
Sbjct: 109 QRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 76  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 195
Query: 141 LYI 143
            Y+
Sbjct: 196 QYV 198

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 76  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 135
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            E++ ALE+LH   +IHRD+K +NILL  D  ++++ + 
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG 174

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 77  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 136
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 141 LYI 143
            Y+
Sbjct: 197 QYV 199

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 79  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 141 LYI 143
            Y+
Sbjct: 199 QYV 201

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           + E+ ++R     +HPN+V  +D           ++ +V E++     T  D      + 
Sbjct: 59  VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  + R+ L+ L+FLH+N ++HRD+K +NIL+   G+VKL+ +         + ++ 
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178
Query: 148 VIIYCW 153
           V++  W
Sbjct: 179 VVVTLW 184

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           + E+ ++R     +HPN+V  +D           ++ +V E++     T  D      + 
Sbjct: 51  VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  + R+ L+ L+FLH+N ++HRD+K +NIL+   G+VKL+ +         + ++ 
Sbjct: 111 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP 170
Query: 148 VIIYCW 153
           V++  W
Sbjct: 171 VVVTLW 176

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVC 95
           +  E  VM    HP  V    ++   E+L+  + Y   G L   + +    DE       
Sbjct: 61  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 120
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            E++ ALE+LH   +IHRD+K +NILL  D  ++++ + 
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG 159

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+ +  I       KE + NEI VM +  H N++   D++    ++ +VMEY+ GG L D
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175
Query: 80  VVTETCMDEGQIAAV--CREVLQALEFLHSNQVIHRDIKSDNIL 121
            + +   +  ++  +   +++ + +  +H   ++H D+K +NIL
Sbjct: 176 RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENIL 219

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM 86
           T+  Q +K L+++  + MR    P  V +  +     ++W+ ME +   +  D   +  +
Sbjct: 87  TVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM--DTSLDKFYKQVI 144
Query: 87  DEGQ------IAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIAT 139
           D+GQ      +  +   +++ALE LHS   VIHRD+K  N+L+   G VK+  +   I+ 
Sbjct: 145 DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG--ISG 202
Query: 140 KLYIEISKVI 149
            L   ++K I
Sbjct: 203 YLVDSVAKTI 212

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VTETCMDEGQIA 92
           K++ + EI ++++ +H N+VN L+     +  ++V E++    L D+ +    +D   + 
Sbjct: 68  KKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ 127
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               +++  + F HS+ +IHRDIK +NIL+   G VKL  + 
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFG 169

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEY-LPGGSLTDVVTETC-MDEGQIAAVCREVLQALEF 104
             HP ++  LD +   E   +V+E  LP   L D +TE   + EG       +V+ A++ 
Sbjct: 95  GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 105 LHSNQVIHRDIKSDNILLGL-DGSVKL 130
            HS  V+HRDIK +NIL+ L  G  KL
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKL 181

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 39  NEILVMRENKHPNIVNYLDSYL-VGEE-LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
            EI ++R   H +I+ Y       GE+ L +VMEY+P GSL D +    +   Q+    +
Sbjct: 65  QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ + + +LH+   IHR++ + N+LL  D  VK+  + 
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFG 162

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG----------S 76
           T+ ++ +K+L+++  +VMR +  P IV +  +     + W+ ME +              
Sbjct: 58  TVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSV 117
Query: 77  LTDVVTETCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNR 135
           L DV+ E  + +  +A V     +AL  L  N ++IHRDIK  NILL   G++KL  +  
Sbjct: 118 LDDVIPEEILGKITLATV-----KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG- 171
Query: 136 FIATKLYIEISK 147
            I+ +L   I+K
Sbjct: 172 -ISGQLVDSIAK 182

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 36  LIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAA 93
           L+  EI ++   +H NI++  +S+   EEL ++ E++ G  + + +  +   ++E +I +
Sbjct: 47  LVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVS 106
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNIL 121
              +V +AL+FLHS+ + H DI+ +NI+
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENII 134

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           + E+ ++R     +HPN+V  +D           ++ +V E++     T  D      + 
Sbjct: 51  VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  + R+ L+ L+FLH+N ++HRD+K +NIL+   G+VKL+ +         + +  
Sbjct: 111 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDP 170
Query: 148 VIIYCW 153
           V++  W
Sbjct: 171 VVVTLW 176

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREV 98
           EI  ++  +HP+I+   D      ++ +V+EY  GG L D + E   M E +     +++
Sbjct: 59  EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + A+E+ H ++++HRD+K +N+LL  + +VK++ + 
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG 153

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVC 95
           +  E  VM    HP  V     +   E+L+  + Y   G L   + +    DE       
Sbjct: 84  VTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 143
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLD--------GSVKL-------SKWNRFIATK 140
            E++ ALE+LH   +IHRD+K +NILL  D        G+ K+       ++ N F+ T 
Sbjct: 144 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 203
Query: 141 LYI 143
            Y+
Sbjct: 204 QYV 206

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         ++++E++  G+L D + E   +  +++AV
Sbjct: 52  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAV 109
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 154

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 48  KHPNIVNYLDSY---LVGEELWV-VMEYLPGGSLTDVVTETCMDEGQI-AAVCREVLQAL 102
           +HPNIV + DS+   + G++  V V E    G+L   +    + + ++  + CR++L+ L
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 103 EFLHSNQ--VIHRDIKSDNILL-GLDGSVKLSKWNRFIATKLYIEISKVII 150
           +FLH+    +IHRD+K DNI + G  GSVK+      +AT      +K +I
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG--LATLKRASFAKAVI 191

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         ++++E++  G+L D + E   +  +++AV
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAV 111
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         ++++E++  G+L D + E   +  +++AV
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAV 111
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM 86
           T+  Q +K L+++  + MR    P  V +  +     ++W+ ME +   +  D   +  +
Sbjct: 43  TVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM--DTSLDKFYKQVI 100
Query: 87  DEGQ------IAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIAT 139
           D+GQ      +  +   +++ALE LHS   VIHRD+K  N+L+   G VK+  +   I+ 
Sbjct: 101 DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG--ISG 158
Query: 140 KLYIEISKVI 149
            L  +++K I
Sbjct: 159 YLVDDVAKDI 168

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC----MDEGQIA 92
            + E+ +M+  +HPNIV ++ +      L +V EYL  GSL  ++ ++     +DE +  
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 93  AVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKL 130
           ++  +V + + +LH+    ++HR++KS N+L+    +VK+
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV 180

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR- 96
           I EI +M+E KH NIV   D      +L +V E++      D   +  MD   +    R 
Sbjct: 51  IREISLMKELKHENIVRLYDVIHTENKLTLVFEFM------DNDLKKYMDSRTVGNTPRG 104
Query: 97  -----------EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                      ++LQ L F H N+++HRD+K  N+L+   G +KL  + 
Sbjct: 105 LELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG 153

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAV 94
              E   M +  HP +V +         +++V EY+  G L + +      ++  Q+  +
Sbjct: 50  FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLYI 143
           C +V + + FL S+Q IHRD+ + N L+  D  VK+S +   R++    Y+
Sbjct: 110 CYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  +++AV
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAV 116
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  +++AV
Sbjct: 52  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAV 109
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 154

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  +++AV
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAV 111
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         ++++E++  G+L D + E    E      
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  +++AV
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAV 111
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 92  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  + 
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E   +  +++AV
Sbjct: 52  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAV 109
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 154

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTETC--MDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D +      +D  ++    
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 43  VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQA 101
           ++ +  HP +V    ++    +L++++++L GG L T +  E    E  +     E+   
Sbjct: 83  ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALG 142
Query: 102 LEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           L+ LHS  +I+RD+K +NILL  +G +KL+ + 
Sbjct: 143 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 175

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 38  INEILVMRE---NKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLT--DVVTETCMD 87
           + E+ ++R     +HPN+V  +D           ++ +V E++     T  D      + 
Sbjct: 51  VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 110
Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK 147
              I  + R+ L+ L+FLH+N ++HRD+K +NIL+   G+VKL+ +         + +  
Sbjct: 111 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP 170
Query: 148 VIIYCW 153
           V++  W
Sbjct: 171 VVVTLW 176

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 60  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 157

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 59  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 156

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         ++++E++  G+L D + E    E      
Sbjct: 55  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 157

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 65  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 162

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 66  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 163

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 68  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 165

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 67  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 164

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           +E  + E L MR+  HP+IV  L   +    +W++ME    G L     V +  +D   +
Sbjct: 55  REKFLQEALTMRQFDHPHIVK-LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEISK 147
                ++  AL +L S + +HRDI + N+L+  +  VKL  +  +R++      + SK
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLTDV 80
           I   +Q  +E    E  + R   HPNI+  L +Y + E     E W+++ +   G+L + 
Sbjct: 62  ILCHEQQDREEAQREADMHRLFNHPNILR-LVAYCLRERGAKHEAWLLLPFFKRGTLWNE 120
Query: 81  VTETCMDEG------QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + E   D+G      QI  +   + + LE +H+    HRD+K  NILLG +G   L    
Sbjct: 121 I-ERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
Query: 135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIE 168
                 +++E S+  +   DW A      Y A E
Sbjct: 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 79  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 79  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 138
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 176

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLD-SYLVGE-ELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAV 94
            EI +++      IV Y   SY  G  EL +VMEYLP G L D +      +D  ++   
Sbjct: 57  REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 116
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++ + +E+L S + +HRD+ + NIL+  +  VK++ + 
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 156

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 46  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 105
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S +  +R++    Y
Sbjct: 106 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 155

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 58  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 118 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 160

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +  +++L  + +LH+ ++ H D+K +NI+L LD ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNI 153

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S +  +R++    Y
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +  +++L  + +LH+ ++ H D+K +NI+L LD ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNI 153

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  ++  A+E+L     IHRD+ + N L+G +  VK++
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +  +++L  + +LH+ ++ H D+K +NI+L
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +  +++L  + +LH+ ++ H D+K +NI+L LD ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNI 153

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 55  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 115 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 157

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 56  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 158

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 50  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 109
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S +  +R++    Y
Sbjct: 110 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 159

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 54  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  ++  A+E+L     IHRD+ + N L+G +  VK++
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D + +   + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
           +  +++L  + +LH+ ++ H D+K +NI+L LD ++
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML-LDKNI 153

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S + 
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 67  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 127 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 169

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 73  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 132
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 133 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 190
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +  + C     +A
Sbjct: 191 YDGERKKVLCGTPNYIA 207

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 56  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 158

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 51  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S + 
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 51  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S +  +R++    Y
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 160

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 75  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 134
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 135 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 192
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +  + C     +A
Sbjct: 193 YDGERKKVLCGTPNYIA 209

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 56  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHRD+ + N L+G +  VK++ + 
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 158

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAV 94
            I E  VM    H  +V           ++++ EY+  G L + + E        Q+  +
Sbjct: 57  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLY 142
           C++V +A+E+L S Q +HRD+ + N L+   G VK+S +  +R++    Y
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 166

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 49  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 108
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 109 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 166
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +  + C     +A
Sbjct: 167 YDGERKKVLCGTPNYIA 183

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVC 95
            E  + R  KHPNIV   DS  + EE   ++V + + GG L  D+V      E   +   
Sbjct: 52  REARICRLLKHPNIVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG 123
           +++L+++   H N ++HRD+K +N+LL 
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLA 137

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     +++ME + GG L   + ET
Sbjct: 84  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRET 142
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 203 GMARDIY 209

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 53  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     +++ME + GG L   + ET
Sbjct: 69  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRET 127
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 188 GMARDIY 194

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 40  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 94
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 95  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 148

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVC 95
            E  + R  KHPNIV   DS  + EE   ++V + + GG L  D+V      E   +   
Sbjct: 52  REARICRLLKHPNIVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG 123
           +++L+++   H N ++HRD+K +N+LL 
Sbjct: 110 QQILESVNHCHLNGIVHRDLKPENLLLA 137

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVC 95
            E  + R  KHPNIV   DS  + EE   ++V + + GG L  D+V      E   +   
Sbjct: 79  REARICRLLKHPNIVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 136
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG 123
            ++L+++  +H + ++HRD+K +N+LL 
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLA 164

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 52  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 52  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 53  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 53  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 52  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 53  KKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 166

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAV 94
            EI +++      IV Y   SY  G + L +VMEYLP G L D +      +D  ++   
Sbjct: 73  REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++ + +E+L S + +HRD+ + NIL+  +  VK++ + 
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 172

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAV 94
            EI +++      IV Y   SY  G + L +VMEYLP G L D +      +D  ++   
Sbjct: 60  REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 119
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++ + +E+L S + +HRD+ + NIL+  +  VK++ + 
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 159

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 42  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 97  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 52  KKEIXINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAV 94
            EI +++      IV Y   SY  G + L +VMEYLP G L D +      +D  ++   
Sbjct: 61  REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++ + +E+L S + +HRD+ + NIL+  +  VK++ + 
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 160

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 52  KKEIXINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQI 91
           KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +  +  M E   
Sbjct: 53  KKEIXINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 41  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 95
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 96  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 149

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC---MDEGQIAAV 94
           + EI +++E KH NIV   D     ++L +V E+           ++C   +D   + + 
Sbjct: 49  LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC--DQDLKKYFDSCNGDLDPEIVKSF 106
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++L+ L F HS  V+HRD+K  N+L+  +G +KL+ + 
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFG 146

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN++L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 42  MKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 97  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC---MDEGQIAAV 94
           + EI +++E KH NIV   D     ++L +V E+           ++C   +D   + + 
Sbjct: 49  LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSF 106
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             ++L+ L F HS  V+HRD+K  N+L+  +G +KL+ + 
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFG 146

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            E  + R  KHPNIV   DS       +++ + + GG L  D+V      E   +   ++
Sbjct: 70  REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 129
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLG--LDG-SVKLSKWN 134
           +L+A+   H   V+HRD+K +N+LL   L G +VKL+ + 
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFG 169

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E  ++AV
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAV 318
Query: 95  -----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  ++  A+E+L     IHR++ + N L+G +  VK++ + 
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG 363

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFL 105
           + HP +V     +     L+ V+EY+ GG L   +  +  + E        E+  AL +L
Sbjct: 63  SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           H   +I+RD+K DN+LL  +G +KL+ + 
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYG 151

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D + +    +D  ++    
Sbjct: 62  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHR++ + NIL+  +  VK+  +
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDF 159

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           KIL   + +     +  ++ + ++   +K P +      +   + L+ VMEY+ GG L  
Sbjct: 50  KILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 109
Query: 80  VVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            + +     E Q      E+   L FLH   +I+RD+K DN++L  +G +K++ + 
Sbjct: 110 HIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG 165

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFL 105
           + HP +V     +     L+ V+EY+ GG L   +  +  + E        E+  AL +L
Sbjct: 67  SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           H   +I+RD+K DN+LL  +G +KL+ + 
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYG 155

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFL 105
           + HP +V     +     L+ V+EY+ GG L   +  +  + E        E+  AL +L
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           H   +I+RD+K DN+LL  +G +KL+ + 
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYG 198

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT-DVVTETCMDEGQIAAVCREVLQALEFL 105
           + HP +V     +     L+ V+EY+ GG L   +  +  + E        E+  AL +L
Sbjct: 78  SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 106 HSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           H   +I+RD+K DN+LL  +G +KL+ + 
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYG 166

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 166

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVT---ETCMDEG 89
           +  + E  VM + +H N+V  L   +V E+  L++V EY+  GSL D +     + +   
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S + 
Sbjct: 290 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 334

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--CMDEGQIAAVCR 96
            E++  R+ +H N+V ++ + +    L ++     G +L  VV +    +D  +   + +
Sbjct: 78  REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
           E+++ + +LH+  ++H+D+KS N+    +G V ++ +  F
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLF 176

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 22  LSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV 81
           +   +   +  KKE+ IN +L      H N+V +      G   ++ +EY  GG L D +
Sbjct: 42  MKRAVDCPENIKKEICINAML-----NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI 96
Query: 82  T-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  M E        +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 97  EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 150

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 55  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 114
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 115 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 172
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 173 YDGERKKTLCGTPNYIA 189

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 51  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 110
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 168
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 169 YDGERKKTLCGTPNYIA 185

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 25  PITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VT 82
           P +L  +P ++E +  EI + R   H ++V +   +   + ++VV+E     SL ++   
Sbjct: 51  PKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR 110
Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
              + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+  +   +ATK+ 
Sbjct: 111 RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVE 168
Query: 143 IEISKVIIYCWDWTAVA 159
            +  +    C     +A
Sbjct: 169 YDGERKKTLCGTPNYIA 185

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMDEGQI 91
           HPNI+N L +      L++ +EY P G+L D +                 T + +   Q+
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
                +V + +++L   Q IHRD+ + NIL+G +   K++ +      ++Y++
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 197

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E KH NIV   D     + L +V E+L      L DV  E  ++     +  
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFL 106
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++L  + + H  +V+HRD+K  N+L+  +G +K++ + 
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMDEGQI 91
           HPNI+N L +      L++ +EY P G+L D +                 T + +   Q+
Sbjct: 75  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
                +V + +++L   Q IHRD+ + NIL+G +   K++ +      ++Y++
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 187

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E KH NIV   D     + L +V E+L      L DV  E  ++     +  
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFL 106
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++L  + + H  +V+HRD+K  N+L+  +G +K++ + 
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG--SLTDVVTETCMDEGQIAAVC 95
           I EI +++E KH NIV   D     + L +V E+L      L DV  E  ++     +  
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFL 106
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++L  + + H  +V+HRD+K  N+L+  +G +K++ + 
Sbjct: 107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVT---ETCMDEG 89
           +  + E  VM + +H N+V  L   +V E+  L++V EY+  GSL D +     + +   
Sbjct: 44  QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 102
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S + 
Sbjct: 103 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 147

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVT---ETCMDEG 89
           +  + E  VM + +H N+V  L   +V E+  L++V EY+  GSL D +     + +   
Sbjct: 59  QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 117
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S + 
Sbjct: 118 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 162

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 110 PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 168
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 169 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 229 GMARDIY 235

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEE-------------LWVVMEYLPGGSL 77
           + K   I++E++++    H  +V Y  ++L                 L++ MEY   G+L
Sbjct: 43  EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 78  TDVVTETCMDE--GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            D++    +++   +   + R++L+AL ++HS  +IHRD+K  NI +    +VK+  +
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 86  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 144
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 145 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 204
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 205 GMARDIY 211

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 61  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 119
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 120 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 179
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 180 GMARDIY 186

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 87  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 145
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 146 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 205
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 206 GMARDIY 212

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVT---ETCMDEG 89
           +  + E  VM + +H N+V  L   +V E+  L++V EY+  GSL D +     + +   
Sbjct: 50  QAFLAEASVMTQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 108
Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S + 
Sbjct: 109 CLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG 153

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 76  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 134
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 135 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 194
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 195 GMARDIY 201

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 70  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 128
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 189 GMARDIY 195

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 70  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 128
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 189 GMAQDIY 195

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 59  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 116
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 172

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 40  EILVMRE-NKHPNIVNYLDSYLVG--EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR 96
           EI+++ E + H NIVN L+        ++++V +Y+    L  V+    ++      V  
Sbjct: 58  EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVY 116
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT 156
           ++++ +++LHS  ++HRD+K  NILL  +  VK++    F  ++ ++ I +V        
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVAD---FGLSRSFVNIRRV-------- 165
Query: 157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD 216
              +  +  +I  +T      + I+ + +  R  + P I+     Y  G ++W++   L 
Sbjct: 166 ---TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222
Query: 217 SYLVGEELWYTKPIEEPSNTTDE 239
             L G      KPI   S+T ++
Sbjct: 223 EILCG------KPIFPGSSTMNQ 239

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 69  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 127
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 188 GMARDIY 194

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 20  KILSNPITLAQQPKKELI--INEILVMRE-------NKHPNIVNYLDSYLVGEELWVVME 70
           K L   I   ++ KK L   ++E   +RE        +H ++V Y  ++   + + +  E
Sbjct: 28  KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 87
Query: 71  YLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           Y  GGSL D ++E     +   E ++  +  +V + L ++HS  ++H DIK  NI +
Sbjct: 88  YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 144

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 49  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 106
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+  + 
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 135 ----------RFIATKLY 142
                      F+AT+ Y
Sbjct: 167 LARHTDDEMAGFVATRWY 184

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 55  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 112
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKI 168

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++ E L++ +  H NIV  +   L     ++++E + GG L   + ET
Sbjct: 96  PEVCSEQDELDFLM-EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 154
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 155 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 214
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 215 GMARDIY 221

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 20  KILSNPITLAQQPKKELI--INEILVMRE-------NKHPNIVNYLDSYLVGEELWVVME 70
           K L   I   ++ KK L   ++E   +RE        +H ++V Y  ++   + + +  E
Sbjct: 32  KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91
Query: 71  YLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           Y  GGSL D ++E     +   E ++  +  +V + L ++HS  ++H DIK  NI +
Sbjct: 92  YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+  + 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 135 ----------RFIATKLY 142
                      F+AT+ Y
Sbjct: 171 LARHTDDEMAGFVATRWY 188

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 72  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 131
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 172

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA- 93
           E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E    E      
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++  A+E+L     IHR++ + N L+G +  VK++ + 
Sbjct: 360 LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG 402

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 20  KILSNPITLAQQPKKELI--INEILVMRE-------NKHPNIVNYLDSYLVGEELWVVME 70
           K L   I   ++ KK L   ++E   +RE        +H ++V Y  ++   + + +  E
Sbjct: 30  KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 89
Query: 71  YLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           Y  GGSL D ++E     +   E ++  +  +V + L ++HS  ++H DIK  NI +
Sbjct: 90  YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA------ 93
           E L++ +  H NIV  +   L     ++++E + GG L   + ET     Q ++      
Sbjct: 98  EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF-IATKLY 142
             V R++    ++L  N  IHRDI + N LL   G  +++K   F +A  +Y
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 79  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 138
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+  + 
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 135 ----------RFIATKLY 142
                      F+AT+ Y
Sbjct: 171 LARHTDDEMAGFVATRWY 188

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 20  KILSNPITLAQQPKKELI--INEILVMRE-------NKHPNIVNYLDSYLVGEELWVVME 70
           K L   I   ++ KK L   ++E   +RE        +H ++V Y  ++   + + +  E
Sbjct: 30  KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 89
Query: 71  YLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           Y  GGSL D ++E     +   E ++  +  +V + L ++HS  ++H DIK  NI +
Sbjct: 90  YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 51  NIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQ 109
           NI+  ++ +      ++V E L GGS L  +  +   +E + + V R+V  AL+FLH+  
Sbjct: 72  NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKG 131
Query: 110 VIHRDIKSDNIL 121
           + HRD+K +NIL
Sbjct: 132 IAHRDLKPENIL 143

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+   +
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI--LD 168
Query: 135 RFIATKLYIEISKVIIYCW 153
           R +A     E++  +   W
Sbjct: 169 RGLARHTDDEMTGYVATRW 187

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 49  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 106
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 107 ADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++  +++ + N H NIV  +   L     ++++E + GG L   + ET
Sbjct: 84  PEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 142
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 203 GMARDIY 209

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
           P   ++Q + + ++  +++ + N H NIV  +   L     ++++E + GG L   + ET
Sbjct: 70  PEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 128
Query: 85  CMDEGQIAA--------VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRF 136
                Q ++        V R++    ++L  N  IHRDI + N LL   G  +++K   F
Sbjct: 129 RPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 188
Query: 137 -IATKLY 142
            +A  +Y
Sbjct: 189 GMARDIY 195

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF 166
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA
Sbjct: 46  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR---TQRGLFAA 102
Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
                +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 103 ETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 30  QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT----ETC 85
           + PK   +  EI ++   +H NI+  LD +       +VME    GS  D+         
Sbjct: 69  EDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPR 126
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI---ATKLY 142
           +DE   + + R+++ A+ +L    +IHRDIK +NI++  D ++KL  +         KL+
Sbjct: 127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF 186
Query: 143 IEISKVIIYC 152
                 I YC
Sbjct: 187 YTFCGTIEYC 196

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 58  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 115
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 58  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 115
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 171

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 79  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 138
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 64  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 121
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKI 177

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 50  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 107
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 49  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 106
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 51  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 108
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 109 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 164

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 49  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 106
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 60  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 117
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++ME+LP GSL + + +    +D  ++    
Sbjct: 64  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            ++ + +E+L + + IHRD+ + NIL+  +  VK+  +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 60  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 117
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 60  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 117
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 58  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 115
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 50  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 107
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 163

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 59  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 116
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 63  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 120
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 121 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 52  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 109
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 110 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 165

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 60  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 117
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 55  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 112
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 59  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 116
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 58  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 115
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 171

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 55  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 112
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 55  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 112
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 168

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 82  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMG 139
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 140 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 195

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 64  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 121
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 72  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 129
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 59  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 116
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 172

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 65  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 122
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 65  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 122
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 38  INEILVMRENKHPNIVNYL-----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
           + EI +++  KH NI+        DS+    E++++ E +    L  V++   + +  I 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQ 115
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               + L+A++ LH + VIHRD+K  N+L+  +  +K+  + 
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG 157

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 73  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 130
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 53  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 110
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 73  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 130
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 72  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 129
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 185

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 38  INEILVMRENKHPNIVNYL-----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
           + EI +++  KH NI+        DS+    E++++ E +    L  V++   + +  I 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQ 115
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               + L+A++ LH + VIHRD+K  N+L+  +  +K+  + 
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG 157

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 38  INEILVMRENKHPNIVNYL-----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
           + EI +++  KH NI+        DS+    E++++ E +    L  V++   + +  I 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQ 115
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               + L+A++ LH + VIHRD+K  N+L+  +  +K+  + 
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG 157

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 73  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 130
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 186

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 76  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 133
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 65  KKLSKPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 122
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 178

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-----WVVMEYLPG 74
           K LS P       K+     E+ +++  KH N++  LD +     L       ++ +L G
Sbjct: 76  KKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 133
Query: 75  GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCRE 97
            E  + R  KHPNIV   DS       +++ + + GG L  D+V      E   +   ++
Sbjct: 59  REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLG--LDG-SVKLSKWN 134
           +L+A+   H   V+HR++K +N+LL   L G +VKL+ + 
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG 158

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA
Sbjct: 44  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR---TQRGLFAA 100
Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
                +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 101 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA
Sbjct: 46  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR---TQRGLFAA 102
Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
                +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 103 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I + Q  K E ++N I + R    P        YLV +      E+   G L++V+ +  
Sbjct: 68  IKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFD----FCEHDLAGLLSNVLVKFT 123
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + E  I  V + +L  L ++H N+++HRD+K+ N+L+  DG +KL+ + 
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA
Sbjct: 49  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR---TQRGLFAA 105
Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
                +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 50  PNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQAL 102
           P+IV  LD Y     G+  L ++ME + GG L   + E       E + A + R++  A+
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 103 EFLHSNQVIHRDIKSDNIL 121
           +FLHS+ + HRD+K +N+L
Sbjct: 142 QFLHSHNIAHRDVKPENLL 160

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
            E+ +++  +H N++  LD +   E      + ++VM ++ G  L  ++    + E +I 
Sbjct: 73  RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQ 131
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC 152
            +  ++L+ L ++H+  +IHRD+K  N+ +  D  +K+  +   +A +   E+   ++  
Sbjct: 132 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG--LARQADSEMXGXVVTR 189
Query: 153 W 153
           W
Sbjct: 190 W 190

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--- 84
           +  + +++  I E+  +    HPNIV    + L    + +VMEY  GGSL +V+      
Sbjct: 40  IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPL 97
Query: 85  -CMDEGQIAAVCREVLQALEFLHSNQ---VIHRDIKSDNILLGLDGSV 128
                    + C +  Q + +LHS Q   +IHRD+K  N+LL   G+V
Sbjct: 98  PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 145

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-----------------TETCMDEGQI 91
           HPNI+N L +      L++ +EY P G+L D +                 T + +   Q+
Sbjct: 82  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
                +V + +++L   Q IHR++ + NIL+G +   K++ +      ++Y++
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVK 194

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           KIL   + +     +  ++ + ++    K P +      +   + L+ VMEY+ GG L  
Sbjct: 51  KILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 110
Query: 80  VVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            + +     E        E+   L FL S  +I+RD+K DN++L  +G +K++ + 
Sbjct: 111 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 166

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 50  PNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQAL 102
           P+IV  LD Y     G+  L ++ME + GG L   + E       E + A + R++  A+
Sbjct: 63  PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 103 EFLHSNQVIHRDIKSDNIL 121
           +FLHS+ + HRD+K +N+L
Sbjct: 123 QFLHSHNIAHRDVKPENLL 141

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--- 84
           +  + +++  I E+  +    HPNIV    + L    + +VMEY  GGSL +V+      
Sbjct: 39  IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPL 96
Query: 85  -CMDEGQIAAVCREVLQALEFLHSNQ---VIHRDIKSDNILLGLDGSV 128
                    + C +  Q + +LHS Q   +IHRD+K  N+LL   G+V
Sbjct: 97  PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY PGG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           +E  I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA
Sbjct: 47  EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR---TQRGLFAA 103
Query: 94  -----VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
                +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +     S+     L++VMEY PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I + Q  K E ++N I + R    P        YLV +      E+   G L++V+ +  
Sbjct: 67  IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD----FCEHDLAGLLSNVLVKFT 122
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + E  I  V + +L  L ++H N+++HRD+K+ N+L+  DG +KL+ + 
Sbjct: 123 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 169

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +     S+     L++VMEY PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  + +    P +V    S+     L++V+EY PGG +   +       E     
Sbjct: 87  EHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G +K++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 187

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA--- 93
            I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA   
Sbjct: 69  FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETL 125
Query: 94  --VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLY 142
             +C +V + + +L    VIHRD+ + N L+G +  +K+S +   RF+    Y
Sbjct: 126 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 178

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I + Q  K E ++N I + R    P        YLV +      E+   G L++V+ +  
Sbjct: 68  IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD----FCEHDLAGLLSNVLVKFT 123
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + E  I  V + +L  L ++H N+++HRD+K+ N+L+  DG +KL+ + 
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
            E+ +++  KH N++  LD +          E+++V   L G  L ++V    + +  + 
Sbjct: 76  RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKSQALSDEHVQ 134
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  ++L+ L+++HS  +IHRD+K  N+ +  D  +++
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I + Q  K E ++N I + R    P        YLV +      E+   G L++V+ +  
Sbjct: 68  IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD----FCEHDLAGLLSNVLVKFT 123
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           + E  I  V + +L  L ++H N+++HRD+K+ N+L+  DG +KL+ + 
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG 170

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           KIL   + +     +  ++ + ++    K P +      +   + L+ VMEY+ GG L  
Sbjct: 372 KILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 431
Query: 80  VVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            + +     E        E+   L FL S  +I+RD+K DN++L  +G +K++ + 
Sbjct: 432 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 487

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +     S+     L++VMEY PGG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G +K++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQI 91
           KE  ++E ++M+   HP+IV  L   +  E  W++ME  P G L   +   +  +    +
Sbjct: 69  KEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL 127
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEIS 146
                ++ +A+ +L S   +HRDI   NIL+     VKL  +  +R+I  + Y + S
Sbjct: 128 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVL----QALEFLHSNQVIHRDIKSDNI 120
           L++ M+     +L D +   C  E +   VC  +     +A+EFLHS  ++HRD+K  NI
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 121 LLGLDGSVKLSKWN 134
              +D  VK+  + 
Sbjct: 196 FFTMDDVVKVGDFG 209

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 40  EILVMRENKHPNIVNY--LDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           EI ++R   H NIV Y  + +   G  + ++ME+LP GSL + +   +  ++  Q     
Sbjct: 73  EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++ + +++L S Q +HRD+ + N+L+  +  VK+  + 
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 171

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQI 91
           KE  ++E ++M+   HP+IV  L   +  E  W++ME  P G L   +   +  +    +
Sbjct: 53  KEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL 111
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEIS 146
                ++ +A+ +L S   +HRDI   NIL+     VKL  +  +R+I  + Y + S
Sbjct: 112 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 40  EILVMRENKHPNIVNY--LDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           EI ++R   H NIV Y  + +   G  + ++ME+LP GSL + +   +  ++  Q     
Sbjct: 61  EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            ++ + +++L S Q +HRD+ + N+L+  +  VK+  + 
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG 159

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQI 91
           KE  ++E ++M+   HP+IV  L   +  E  W++ME  P G L   +   +  +    +
Sbjct: 57  KEKFMSEAVIMKNLDHPHIVK-LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL 115
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW--NRFIATKLYIEIS 146
                ++ +A+ +L S   +HRDI   NIL+     VKL  +  +R+I  + Y + S
Sbjct: 116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCRE 97
           ++LV  ++K    ++Y  ++     L++VM+Y  GG L  +++  E  + E        E
Sbjct: 126 DVLVNGDSKWITTLHY--AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           ++ A++ +H    +HRDIK DNIL+ ++G ++L+ + 
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG 220

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEEL-------WVVMEY 71
           ++LSN     ++ K   II E+  M++ + HPNIV +  +  +G+E        ++++  
Sbjct: 60  RLLSN-----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE 114
Query: 72  LPGGSLTDVVTETCMDEGQIAAVCREVL-------QALEFLHSNQ--VIHRDIKSDNILL 122
           L  G L + + +    E +    C  VL       +A++ +H  +  +IHRD+K +N+LL
Sbjct: 115 LCKGQLVEFLKKM---ESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171
Query: 123 GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESST 171
              G++KL  +        Y +        + W+A     V   I  +T
Sbjct: 172 SNQGTIKLCDFGSATTISHYPD--------YSWSAQRRALVEEEITRNT 212

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 31  QPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT---ETCM 86
           Q  +  I++EI V+   K  P ++N  + Y    E+ +++EY  GG +  +        +
Sbjct: 69  QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMV 128
Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
            E  +  + +++L+ + +LH N ++H D+K  NILL 
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 65  LWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           L++VM+Y  GG L  +++  E  + E        E++ A++ +H    +HRDIK DN+LL
Sbjct: 165 LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 224
Query: 123 GLDGSVKLSKWN 134
            ++G ++L+ + 
Sbjct: 225 DVNGHIRLADFG 236

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 65  LWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           L++VM+Y  GG L  +++  E  + E        E++ A++ +H    +HRDIK DN+LL
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 208
Query: 123 GLDGSVKLSKWN 134
            ++G ++L+ + 
Sbjct: 209 DVNGHIRLADFG 220

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 39  NEILVMRENKHPNIVNYLDSYL-------------VGEELWVVMEYLPGGSLTDVVTETC 85
            EI ++RE KHPN+++    +L                +LW ++++           +  
Sbjct: 67  REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ-- 124
Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
           +  G + ++  ++L  + +LH+N V+HRD+K  NIL+  +G
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG 165

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEE-------------LWVVMEYLPGGSL 77
           + K   I++E++++    H  +V Y  ++L                 L++ MEY    +L
Sbjct: 43  EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 78  TDVVTETCMDE--GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            D++    +++   +   + R++L+AL ++HS  +IHRD+K  NI +    +VK+  +
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 41/149 (27%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--------------- 79
           E I  E+ +M++  HPNI    + Y   + + +VME   GG L D               
Sbjct: 73  ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 80  --VVTETC------------------------MDEGQIAAVCREVLQALEFLHSNQVIHR 113
             V T+ C                          E  I+ + R++  AL +LH+  + HR
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 114 DIKSDNILLGLDGSVKLSKWNRFIATKLY 142
           DIK +N L   + S ++   +  ++ + Y
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFY 221

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 27  TLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-------- 77
           + A   +KE +++E+ +M    +H NIVN L +   G  + V+ EY   G L        
Sbjct: 86  STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 78  ----TD---VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               TD    +  + +    +     +V Q + FL S   IHRD+ + N+LL
Sbjct: 146 RVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 27  TLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---T 82
           + A   +KE +++E+ +M    +H NIVN L +   G  + V+ EY   G L + +    
Sbjct: 78  STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 137
Query: 83  ETCMD--EGQ------IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           E  +D  +G+      +     +V Q + FL S   IHRD+ + N+LL
Sbjct: 138 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 185

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 80  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 139
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 140 IGEAIQYLHSINIAHRDVKPENLL 163

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 71  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 130
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 131 IGEAIQYLHSINIAHRDVKPENLL 154

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 66  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLL 149

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 27  TLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---T 82
           + A   +KE +++E+ +M    +H NIVN L +   G  + V+ EY   G L + +    
Sbjct: 86  STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 145
Query: 83  ETCMD--EGQ------IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           E  +D  +G+      +     +V Q + FL S   IHRD+ + N+LL
Sbjct: 146 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 110 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLL 193

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSL-TDVVTETCMDEGQIAAVC 95
            E  + R  KH NIV   DS  + EE   ++V + + GG L  D+V      E   +   
Sbjct: 52  REARICRLLKHSNIVRLHDS--ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCI 109
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLG 123
           +++L+A+   H   V+HRD+K +N+LL 
Sbjct: 110 QQILEAVLHCHQMGVVHRDLKPENLLLA 137

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 70  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 129
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 130 IGEAIQYLHSINIAHRDVKPENLL 153

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 72  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 131
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 132 IGEAIQYLHSINIAHRDVKPENLL 155

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 87  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 146
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 65  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 124
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 125 IGEAIQYLHSINIAHRDVKPENLL 148

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 116 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 175
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 176 IGEAIQYLHSINIAHRDVKPENLL 199

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       ++     E+ +++  KH N++  LD +          E+++V   L 
Sbjct: 59  KKLSRPFQSLIHARR--TYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT-LM 115
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           G  L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D  +++
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 66  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLL 149

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 166
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 64  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLL 147

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 66  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLL 149

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +VME L GG L   + +       E + + + + 
Sbjct: 64  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 123
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLL 147

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           I E+ ++++ KH NIV   D     + L +V EYL    L   + +    ++   +    
Sbjct: 48  IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL 106
Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN----RFIATKLY 142
            ++L+ L + H  +V+HRD+K  N+L+   G +KL+ +     + I TK Y
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 27  TLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---- 81
           + A   +KE +++E+ +M    +H NIVN L +   G  + V+ EY   G L + +    
Sbjct: 86  STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 82  ----TETCMDEGQIAAVCREVL-------QALEFLHSNQVIHRDIKSDNILL 122
               T+         A  R++L       Q + FL S   IHRD+ + N+LL
Sbjct: 146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 81  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 140
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 181

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 73  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 132
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 133 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFG 173

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-------ETC--- 85
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +        E C   
Sbjct: 65  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 124
Query: 86  -------MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 180

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCM 86
           T+  Q +K L+ +  +  R    P  V +  +     ++W+  E L   SL D   +  +
Sbjct: 70  TVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSL-DKFYKQVI 127
Query: 87  DEGQ------IAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIAT 139
           D+GQ      +  +   +++ALE LHS   VIHRD+K  N+L+   G VK   +   I+ 
Sbjct: 128 DKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG--ISG 185
Query: 140 KLYIEISKVI 149
            L  +++K I
Sbjct: 186 YLVDDVAKDI 195

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 107 EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 166
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-------ETC--- 85
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +        E C   
Sbjct: 80  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 139
Query: 86  -------MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
                  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 195

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 50  PNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSN 108
           P +V    ++    +L ++++Y+ GG L T +       E ++     E++ ALE LH  
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 109 QVIHRDIKSDNILLGLDGSVKLSKWN---RFIATKLYIEISKVIIYC 152
            +I+RDIK +NILL  +G V L+ +     F+A     E  +   +C
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD----ETERAYDFC 221

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDVVTETCMDEGQIA 92
            E+ +++  KH N++  LD +          E+++V   L G  L ++V    + +  + 
Sbjct: 68  RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT-LMGADLNNIVKCQALSDEHVQ 126
Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  ++L+ L+++HS  +IHRD+K  N+ +  D  +++
Sbjct: 127 FLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 164

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+L+   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 72  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 131
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 187

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 69  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 128
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 184

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 80  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 139
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 195

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 180
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 236

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 80  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNP 139
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 195

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 73  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 132
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 188

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT------------- 82
           +I+E+ +M+   KH NI+N L +      L+V++EY   G+L + +              
Sbjct: 80  LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNP 139
Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++ + 
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG 195

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHS 107
           HPNIV   + +      ++VME L GG L + + +     E + + + R+++ A+  +H 
Sbjct: 65  HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 108 NQVIHRDIKSDNILL 122
             V+HRD+K +N+L 
Sbjct: 125 VGVVHRDLKPENLLF 139

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-MDEGQIAA 93
           E  +NE  +++    P +V    S+     L++VMEY+ GG +   +       E     
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145
Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
              +++   E+LHS  +I+RD+K +N+++   G ++++ + 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFG 186

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEEL------WVVMEYLPGGSLTDVVTETCMD--EGQ 90
            E+L+++  +H N++  LD +     L      ++VM ++     TD+     M+  E +
Sbjct: 90  RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGMEFSEEK 145
Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII 150
           I  +  ++L+ L+++HS  V+HRD+K  N+ +  D  +K+  +   +A     E++  ++
Sbjct: 146 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG--LARHADAEMTGYVV 203
Query: 151 YCW 153
             W
Sbjct: 204 TRW 206

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETCMDEGQIAAVCREVLQALEFLHS 107
           H N++  ++ +   +  ++V E + GGS L+ +      +E + + V ++V  AL+FLH+
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 108 NQVIHRDIKSDNILL 122
             + HRD+K +NIL 
Sbjct: 130 KGIAHRDLKPENILC 144

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETCMDEGQIAAVCREVLQALEFLHS 107
           H N++  ++ +   +  ++V E + GGS L+ +      +E + + V ++V  AL+FLH+
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 108 NQVIHRDIKSDNILL 122
             + HRD+K +NIL 
Sbjct: 130 KGIAHRDLKPENILC 144

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L+ V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLXQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHS 107
           KHPNI+      L    L +VME+  GG L  V++   +    +     ++ + + +LH 
Sbjct: 64  KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 108 NQ---VIHRDIKSDNILL 122
                +IHRD+KS NIL+
Sbjct: 124 EAIVPIIHRDLKSSNILI 141

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 48  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 104
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 105 DANLXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 160

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 65  LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCR----EVLQALEFLHSNQVIHRDIKSDNI 120
           L++VMEY  GG L  ++++    E   A + R    E++ A++ +H    +HRDIK DNI
Sbjct: 136 LYLVMEYYVGGDLLTLLSK--FGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 121 LLGLDGSVKLSKWN 134
           LL   G ++L+ + 
Sbjct: 194 LLDRCGHIRLADFG 207

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 27  TLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT--- 82
           + A   +KE +++E+ +M    +H NIVN L +   G  + V+ EY   G L + +    
Sbjct: 86  STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR 145
Query: 83  --------------ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
                         E  +    +     +V Q + FL S   IHRD+ + N+LL
Sbjct: 146 PPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 199

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ--IAAV 94
           I++E  VM    +P++   L   L    + ++M+ +P G L D V E   + G   +   
Sbjct: 68  ILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR 135
           C ++ + + +L   +++HRD+ + N+L+     VK++ + R
Sbjct: 127 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGR 167

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 38  INEILVMRENKHPNIVNY--LDSYLVGEELWVVMEYLPGGSLTDVVTETC----MDEGQI 91
           + E  V+++  H NIV    ++         ++ME+ P GSL  V+ E      + E + 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNIL--LGLDG 126
             V R+V+  +  L  N ++HR+IK  NI+  +G DG
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ--IAAV 94
           I++E  VM    +P++   L   L    + ++M+ +P G L D V E   + G   +   
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR 135
           C ++ + + +L   +++HRD+ + N+L+     VK++ + R
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGR 165

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ--IAAV 94
           I++E  VM    +P++   L   L    + ++M+ +P G L D V E   + G   +   
Sbjct: 66  ILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR 135
           C ++ + + +L   +++HRD+ + N+L+     VK++ + R
Sbjct: 125 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGR 165

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 49  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 105
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 106 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+  +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 134 N--RFIATKLYIEISKVIIY 151
              R   T   +E   V  Y
Sbjct: 171 GLARTAGTSFMMEPEVVTRY 190

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 60  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 116
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 117 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 172

>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle Checkpoint Kinase Bub Length = 365

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 58  SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKS 117
           S LVGE L+     L   +L     E  M +G + +    +L  +E +H  ++IH DIK 
Sbjct: 142 SVLVGE-LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKP 200
Query: 118 DNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME 174
           DN +LG +G ++    +   A    I++ + I    D      GT++TA   ++G +
Sbjct: 201 DNFILG-NGFLEQDDEDDLSAGLALIDLGQSI----DMKLFPKGTIFTAKCETSGFQ 252

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 314

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEEL------WVVMEYLPGGSLTDV--VTETCMDEGQ 90
            E+L+++  +H N++  LD +     L      ++VM ++     TD+  +      E +
Sbjct: 72  RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGLKFSEEK 127
Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII 150
           I  +  ++L+ L+++HS  V+HRD+K  N+ +  D  +K+  +   +A     E++  ++
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG--LARHADAEMTGYVV 185
Query: 151 YCW 153
             W
Sbjct: 186 TRW 188

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+  +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 134 N--RFIATKLYIEISKVIIY 151
              R   T   +E   V  Y
Sbjct: 171 GLARTAGTSFMMEPEVVTRY 190

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 51  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 109
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++   + ++     +HRD+++ NIL+G +   K++ + 
Sbjct: 110 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 152

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 314

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 366 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 397

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 56  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 112
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 113 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETC-MDEGQI 91
           K   + E  ++++  HPNIV  +      + +++VME + GG  LT + TE   +    +
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL 215
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  +    +E+L S   IHRD+ + N L+     +K+S + 
Sbjct: 216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG 258

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS-LTDVVTETC-MDEGQI 91
           K   + E  ++++  HPNIV  +      + +++VME + GG  LT + TE   +    +
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL 215
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  +    +E+L S   IHRD+ + N L+     +K+S + 
Sbjct: 216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG 258

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 38  INEILVMRENKHPNIVNY--LDSYLVGEELWVVMEYLPGGSLTDVVTETC----MDEGQI 91
           + E  V+++  H NIV    ++         ++ME+ P GSL  V+ E      + E + 
Sbjct: 55  MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNIL--LGLDG 126
             V R+V+  +  L  N ++HR+IK  NI+  +G DG
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 54  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 110
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 111 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 166

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 93  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 149
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 150 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI+  L+ +         +++++VME L 
Sbjct: 57  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LM 113
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 114 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 169

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 56  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 112
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 113 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 56  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 112
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 113 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 55  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 111
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 49  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 105
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 106 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQIAAVCR 96
           NE+ +  + KHP+I+   + +     +++V+E    G +   +        E +      
Sbjct: 60  NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC 152
           +++  + +LHS+ ++HRD+   N+LL  + ++K++ +   +AT+L +   K    C
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG--LATQLKMPHEKHYTLC 173

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 48  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 104
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 105 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 49  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 105
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 106 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGSLTDVVTETCMDEG 89
           +E  I + ++MR   H NI+ ++ + + G     +L+++ +Y   GSL D +  T +D  
Sbjct: 78  RETEIYQTVLMR---HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAK 134
Query: 90  QIAAVCREVLQALEFLHSN--------QVIHRDIKSDNILLGLDGSV 128
            +  +    +  L  LH+          + HRD+KS NIL+  +G+ 
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLP 73
           K LS P       K+     E+++M+   H NI++ L+ +         +++++VME L 
Sbjct: 93  KKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LM 149
Query: 74  GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +L  V+ +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 150 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 45  RENKHPNIVNYLDSY---LVGEE-LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCRE 97
           R ++ P+IV  +D Y     G + L +V E L GG L   + +       E + + + + 
Sbjct: 110 RASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKS 169
Query: 98  VLQALEFLHSNQVIHRDIKSDNIL 121
           + +A+++LHS  + HRD+K +N+L
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLL 193

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 314

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 37  IINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLPGGSLTDVVTETCMDEGQI 91
           I+ EI ++    H ++V  LD  +  +     EL+VV+E           T   + E  I
Sbjct: 99  ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI 158
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             +   +L  ++++HS  ++HRD+K  N L+  D SVK+  +
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDF 200

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 57  DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIK 116
           D  L  +EL++V+E           T   + E  I  +   +L    F+H + +IHRD+K
Sbjct: 97  DDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLK 156
Query: 117 SDNILLGLDGSVKLSKW 133
             N LL  D SVK+  +
Sbjct: 157 PANCLLNQDCSVKVCDF 173

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ---- 90
           E  + E  +M++ KH  +V  L + +  E +++V EY+  GSL D + +    EG+    
Sbjct: 49  ESFLEEAQIMKKLKHDKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKD---GEGRALKL 104
Query: 91  --IAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  +  +V   + ++     IHRD++S NIL+G
Sbjct: 105 PNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG 139

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 55  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVG 145

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +   T   +   Q+
Sbjct: 55  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVG 145

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSL------TDVVTETCMDEGQIAAVCREVLQA 101
           +HP++V+ +       E+ ++ +Y+  G+L      +D+ T + M   Q   +C    + 
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARG 151
Query: 102 LEFLHSNQVIHRDIKSDNILL 122
           L +LH+  +IHRD+KS NILL
Sbjct: 152 LHYLHTRAIIHRDVKSINILL 172

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLPGGSL------TDVVTETCMDEGQIAAVCREVLQA 101
           +HP++V+ +       E+ ++ +Y+  G+L      +D+ T + M   Q   +C    + 
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-MSWEQRLEICIGAARG 151
Query: 102 LEFLHSNQVIHRDIKSDNILL 122
           L +LH+  +IHRD+KS NILL
Sbjct: 152 LHYLHTRAIIHRDVKSINILL 172

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 47  NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEF 104
            +HP  V    ++  G  L++  E L G SL          + E Q+    R+ L AL  
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 105 LHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI 137
           LHS  ++H D+K  NI LG  G  KL  +   +
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV 205

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 37  IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--------------- 80
           +++E+ +M+   KH NI+N L +      L+V++EY   G+L +                
Sbjct: 133 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 192
Query: 81  --VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             V E  M    + +   ++ + +E+L S + IHRD+ + N+L+  +  +K++ + 
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG 248

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 49  HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIAAVCREVLQALEFLHS 107
           H NIV+ +D     +  ++VMEY+ G +L++ + +   +          ++L  ++  H 
Sbjct: 70  HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 108 NQVIHRDIKSDNILLGLDGSVKLSKW 133
            +++HRDIK  NIL+  + ++K+  +
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDF 155

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 39  NEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
            EI      KH N++ ++ +   G     ELW++  +   GSLTD +    +   ++  V
Sbjct: 58  REIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHV 117
Query: 95  CREVLQALEFLHSN-----------QVIHRDIKSDNILLGLD 125
              + + L +LH +            + HRD KS N+LL  D
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSD 159

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC---MDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++V+EY+  GSL D +       +   Q+
Sbjct: 58  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
             +  ++   + ++     +HRD+++ NIL+G
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVG 148

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC---MDEGQI 91
           E  + E  VM++ +H  +V  L + +  E +++VMEY+  G L D +       +   Q+
Sbjct: 58  EAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
             +  ++   + ++     +HRD+++ NIL+G +   K++ + 
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	400
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-61
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-18
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-61
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-24
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-18
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-53
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-15
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-53
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-22
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-15
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-50
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-15
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-14
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-50
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-14
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-49
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-14
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-49
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-12
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-11
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-43
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-16
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-39
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-16
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-31
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-30
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-29
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-29
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-27
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-26
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-26
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-24
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-21
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-21
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-21
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-21
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-21
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-21
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-20
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-20
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-20
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-20
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	4e-20
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-20
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-20
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-20
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-20
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-20
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-19
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-19
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-19
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-19
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-19
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-19
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-19
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	9e-19
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-19
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-18
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-18
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-18
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-18
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-18
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-18
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-18
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-18
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-18
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-18
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-17
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-17
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-17
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-17
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-17
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-17
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-17
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-16
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-16
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-16
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-16
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-16
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-16
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-16
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-16
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-16
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-15
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-15
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-15
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-14
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-14
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-14
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-14
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-14
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-14
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-14
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-14
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-14
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-14
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	8e-14
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-13
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-13
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-13
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-13
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-13
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-12
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-12
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-12
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-12
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	8e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-11
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	8e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-10
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-10
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-10
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-10
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	8e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-10
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-09
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-09
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-09
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-08
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-08
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	5e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	8e-08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	9e-07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  199 bits (509), Expect = 1e-61
 Identities = 97/106 (91%), Positives = 102/106 (96%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  104 bits (261), Expect = 1e-25
 Identities = 49/74 (66%), Positives = 60/74 (81%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           +ALYLIATN  PE++  EKLS IF+DFL++CLE +VE R SA  LL+H FLKIA+PL+SL
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSL 282

Query: 387 TPLIMAAKEAAKGH 400
           TPLI AAKEA K +
Sbjct: 283 TPLIAAAKEATKNN 296

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTGM-----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ASGTVYTA++ +TG            +PKKELIINEILVMRENK+PNIVNYLDSYLVG+E
Sbjct: 32  ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91

Query: 208 LWNIVNYLD 216
           LW ++ YL 
Sbjct: 92  LWVVMEYLA 100

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  200 bits (511), Expect = 1e-61
 Identities = 62/106 (58%), Positives = 84/106 (79%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L +Q ++EL+ NE+++MR+ +H N+V    SYLVGEELWV+ME+L GG+LTD+V++  
Sbjct: 78  MDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR 137

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++E QIA VC  VLQAL +LH+  VIHRDIKSD+ILL LDG VKLS
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS 183

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 99.7 bits (249), Expect = 7e-24
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           QA+  +  +  P++K   K+S + +DFL++ L  + + RA+A  LL HPFL        L
Sbjct: 248 QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECL 307

Query: 387 TPLIMAAKEAA 397
            PLI   ++  
Sbjct: 308 VPLIQLYRKQT 318

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 84.3 bits (209), Expect = 2e-18
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTGM-----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ++G V  A E  +G            + ++EL+ NE+++MR+ +H N+V    SYLVGEE
Sbjct: 57  STGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE 116

Query: 208 LWNIVNYLD 216
           LW ++ +L 
Sbjct: 117 LWVLMEFLQ 125

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  179 bits (456), Expect = 1e-53
 Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 2/107 (1%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET- 84
           I    + + E  I EI ++    HP IV  L +Y    +LW+++E+ PGG++  ++ E  
Sbjct: 52  IETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD 111

Query: 85  -CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             + E QI  VCR++L+AL FLHS ++IHRD+K+ N+L+ L+G ++L
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL 158

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 92.0 bits (229), Expect = 4e-21
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 387
            L  IA +  P +    K S  F+DFL   L++  ETR SA+ LL+HPF+       +L 
Sbjct: 230 VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR 289

Query: 388 PLIMAAKEA 396
            L+  AK  
Sbjct: 290 ELVAEAKAE 298

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTGM-----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           A G VY A    TG            E + E  I EI ++    HP IV  L +Y    +
Sbjct: 31  AFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK 90

Query: 208 LWNIVNYLD 216
           LW ++ +  
Sbjct: 91  LWIMIEFCP 99

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  177 bits (450), Expect = 9e-53
 Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 4/107 (3%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TE 83
           + +    ++  II EI +M++   P++V Y  SY    +LW+VMEY   GS++D++    
Sbjct: 62  VPVESDLQE--IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             + E +IA + +  L+ LE+LH  + IHRDIK+ NILL  +G  KL
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 95.9 bits (239), Expect = 2e-22
 Identities = 27/71 (38%), Positives = 43/71 (60%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 387
           A+++I TN  P  ++ E  S  F DF+ QCL +  E RA+A+ LL+HPF++ A+ ++ L 
Sbjct: 233 AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILR 292

Query: 388 PLIMAAKEAAK 398
            LI  A +   
Sbjct: 293 DLINEAMDVKL 303

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 73.5 bits (181), Expect = 8e-15
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 159 ASGTVYTAIESSTG---------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
           + G+VY AI   TG         +E   + II EI +M++   P++V Y  SY    +LW
Sbjct: 41  SYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100

Query: 210 NIVNYLD 216
            ++ Y  
Sbjct: 101 IVMEYCG 107

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  171 bits (436), Expect = 1e-50
 Identities = 45/100 (45%), Positives = 64/100 (64%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQ 90
           + + E I  EI V+ +   P +  Y  SYL   +LW++MEYL GGS  D++    +DE Q
Sbjct: 61  EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ 120

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           IA + RE+L+ L++LHS + IHRDIK+ N+LL   G VKL
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKL 160

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL-KIARPLASL 386
            L+LI  N  P ++     S+  ++F++ CL +E   R +A  LLKH F+ + A+  + L
Sbjct: 227 VLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYL 284

Query: 387 TPLIMAAKE 395
           T LI   K 
Sbjct: 285 TELIDRYKR 293

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 12/70 (17%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           + G V+  I++ T              E + E I  EI V+ +   P +  Y  SYL   
Sbjct: 34  SFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT 93

Query: 207 ELWNIVNYLD 216
           +LW I+ YL 
Sbjct: 94  KLWIIMEYLG 103

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  170 bits (434), Expect = 2e-50
 Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 9/109 (8%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC----- 85
           Q   + ++ EI  M +  HPNIV+Y  S++V +ELW+VM+ L GGS+ D++         
Sbjct: 54  QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113

Query: 86  ----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               +DE  IA + REVL+ LE+LH N  IHRD+K+ NILLG DGSV++
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 73.9 bits (182), Expect = 5e-15
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 20/95 (21%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           A+  V  A  +                +   + ++ EI  M +  HPNIV+Y  S++V +
Sbjct: 27  ATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD 86

Query: 207 ELWNIVNYLD--------SYLVGEELWYTKPIEEP 233
           ELW ++  L          ++V +    +  ++E 
Sbjct: 87  ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 328 ALYLIATNKKPEIKE-------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 380
            L L   N  P ++         +K  + F+  +  CL+++ E R +A+ LL+H F + A
Sbjct: 235 VLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294

Query: 381 RPLASLT 387
           +    L 
Sbjct: 295 KNKEFLQ 301

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  169 bits (431), Expect = 1e-49
 Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 15/128 (11%)

Query: 26  ITLAQQPKKE---LIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV- 81
           ++ + +   E    II E+  +++ +HPN + Y   YL     W+VMEY   GS +D++ 
Sbjct: 87  MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLE 145

Query: 82  -TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL---------S 131
             +  + E +IAAV    LQ L +LHS+ +IHRD+K+ NILL   G VKL         +
Sbjct: 146 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205

Query: 132 KWNRFIAT 139
             N F+ T
Sbjct: 206 PANSFVGT 213

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 89.8 bits (223), Expect = 3e-20
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 387
           ALY IA N+ P ++     S+ F++F+D CL++  + R ++ +LLKH F+   RP   + 
Sbjct: 261 ALYHIAQNESPALQSG-HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIM 319

Query: 388 PLIMAAKEAAK 398
            LI   K+A +
Sbjct: 320 DLIQRTKDAVR 330

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 71.3 bits (175), Expect = 6e-14
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 14/89 (15%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
           + G VY A +                     K + II E+  +++ +HPN + Y   YL 
Sbjct: 66  SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 125

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEP 233
               W ++ Y           + KP++E 
Sbjct: 126 EHTAWLVMEYCLGSASDLLEVHKKPLQEV 154

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  170 bits (432), Expect = 2e-49
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 5/111 (4%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
           I L     + +  +  E+ V +   HPNIV Y  +++   ELWVV  ++  GS  D++  
Sbjct: 60  INLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT 119

Query: 84  TC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                M+E  IA + + VL+AL+++H    +HR +K+ +IL+ +DG V LS
Sbjct: 120 HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 65.3 bits (159), Expect = 8e-12
 Identities = 28/133 (21%), Positives = 41/133 (30%), Gaps = 12/133 (9%)

Query: 265 PPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILS 324
            P   +          ++L+K     T P  L  S                +       S
Sbjct: 235 VPFKDMP------ATQMLLEKLNG--TVPCLLDTS--TIPAEELTMSPSRSVANSGLSDS 284

Query: 325 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 384
              +    +    P        S  F  F++QCL+   + R SAS LL H F K  +  A
Sbjct: 285 LTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA 344

Query: 385 S--LTPLIMAAKE 395
           S  L  L+     
Sbjct: 345 SEALPELLRPVTP 357

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 13/73 (17%)

Query: 157 AVASGTVYTAIESSTGM-------------EPKKELIINEILVMRENKHPNIVNYLDSYL 203
                TV  A    TG                    +  E+ V +   HPNIV Y  +++
Sbjct: 37  FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI 96

Query: 204 VGEELWNIVNYLD 216
              ELW + +++ 
Sbjct: 97  ADNELWVVTSFMA 109

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  153 bits (389), Expect = 1e-43
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 11/115 (9%)

Query: 26  ITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVG------EELWVVMEYLPGGSLT 78
           + +    ++E I  EI ++++   H NI  Y  +++        ++LW+VME+   GS+T
Sbjct: 57  MDVTGDEEEE-IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115

Query: 79  DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           D++  T    + E  IA +CRE+L+ L  LH ++VIHRDIK  N+LL  +  VKL
Sbjct: 116 DLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL 170

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 76.6 bits (189), Expect = 8e-16
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 328 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 387
           AL+LI  N  P +K K K S+ FQ F++ CL +    R +   L+KHPF++       + 
Sbjct: 242 ALFLIPRNPAPRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVR 300

Query: 388 PLIMAAKEAAK 398
             +    +  K
Sbjct: 301 IQLKDHIDRTK 311

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 17/75 (22%)

Query: 159 ASGTVYTAIESSTGM----------EPKKELIINEILVMREN-KHPNIVNYLDSYLVG-- 205
             G VY      TG             ++E I  EI ++++   H NI  Y  +++    
Sbjct: 36  TYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95

Query: 206 ----EELWNIVNYLD 216
               ++LW ++ +  
Sbjct: 96  PGMDDQLWLVMEFCG 110

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  143 bits (363), Expect = 1e-39
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCRE 97
            E++       P IV    +   G  + + ME L GGSL  ++ +  C+ E +      +
Sbjct: 99  EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ 158

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGS-VKLS 131
            L+ LE+LH+ +++H D+K+DN+LL  DGS   L 
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALC 193

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 13/72 (18%), Positives = 23/72 (31%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
                IA+   P  +     + +    + + L +E   RASA  L +     +       
Sbjct: 263 PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLK 322

Query: 387 TPLIMAAKEAAK 398
           +P     KE   
Sbjct: 323 SPWKGEYKEPRG 334

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 6/57 (10%)

Query: 159 ASGTVYTAIESSTGME------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
           + G V+   +  TG +        +   + E++       P IV    +   G  + 
Sbjct: 70  SFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVN 126

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  136 bits (345), Expect = 2e-37
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 24  NPITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEE----LWVVMEYLPGGSL 77
             +   +  K E      E  +++  +HPNIV + DS+    +    + +V E +  G+L
Sbjct: 57  CELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTL 116

Query: 78  TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILL-GLDGSVKLS 131
              +     M    + + CR++L+ L+FLH+    +IHRD+K DNI + G  GSVK+ 
Sbjct: 117 KTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG 174

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 376
            PY         +Y   T+        +      ++ ++ C+ +  + R S   LL H F
Sbjct: 227 YPYSE-CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285

Query: 377 LK 378
            +
Sbjct: 286 FQ 287

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 17/92 (18%)

Query: 159 ASGTVYTAIESSTGME-----------PKKEL--IINEILVMRENKHPNIVNYLDSYLVG 205
           +  TVY  +++ T +E            K E      E  +++  +HPNIV + DS+   
Sbjct: 38  SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 97

Query: 206 EE----LWNIVNYLDSYLVGEELWYTKPIEEP 233
            +    +  +   + S  +   L   K ++  
Sbjct: 98  VKGKKCIVLVTELMTSGTLKTYLKRFKVMKIK 129

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  122 bits (309), Expect = 2e-32
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           I        + +  EI + +  KH NIV YL S+     + + ME +PGGSL+ ++    
Sbjct: 55  IPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKW 114

Query: 86  ----MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLS 131
                +E  I    +++L+ L++LH NQ++HRDIK DN+L+    G +K+S
Sbjct: 115 GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 165

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 318 PYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF 376
           P+  +   + A++ +   K  PEI E   +S   + F+ +C E + + RA A+ LL   F
Sbjct: 224 PFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFILKCFEPDPDKRACANDLLVDEF 281

Query: 377 LKIARPLASLTPLI 390
           LK++       P +
Sbjct: 282 LKVSSKKKKTQPKL 295

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 11/60 (18%)

Query: 161 GTVYTAIESSTG-----------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
           G VY   + S                  + +  EI + +  KH NIV YL S+     + 
Sbjct: 36  GIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  120 bits (304), Expect = 1e-31
 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 26  ITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE- 83
             LA    ++  + E+       +H ++V Y  ++   + + +  EY  GGSL D ++E 
Sbjct: 46  KPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN 105

Query: 84  ----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +   E ++  +  +V + L ++HS  ++H DIK  NI +        +
Sbjct: 106 YRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAA 157

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 381
                 + I   + P I +   LSQ F + L   +  + E R SA  L+KH  L  A 
Sbjct: 232 RNGDQWHEIRQGRLPRIPQV--LSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 15/67 (22%)

Query: 161 GTVYTAIESSTGM-------------EPKKELIINEILVMRE-NKHPNIVNYLDSYLVGE 206
           G+V+  ++   G                 ++  + E+       +H ++V Y  ++   +
Sbjct: 25  GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 84

Query: 207 ELWNIVN 213
            +  I N
Sbjct: 85  HML-IQN 90

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  118 bits (299), Expect = 7e-31
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 8/113 (7%)

Query: 26  ITLAQQPK---KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT 82
           + +        +   I EI ++++  HPN++ Y  S++   EL +V+E    G L+ ++ 
Sbjct: 65  VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124

Query: 83  E-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                   + E  +     ++  ALE +HS +V+HRDIK  N+ +   G VKL
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKL 177

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 15/66 (22%)

Query: 161 GTVYTAIESSTG-------------MEPK-KELIINEILVMRENKHPNIVNYLDSYLVGE 206
             VY A     G             M+ K +   I EI ++++  HPN++ Y  S++   
Sbjct: 46  SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105

Query: 207 ELWNIV 212
           EL  IV
Sbjct: 106 ELN-IV 110

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  119 bits (299), Expect = 2e-30
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
           I +++   KE      E+ V+   KHPNIV Y +S+     L++VM+Y  GG L   +  
Sbjct: 57  INISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116

Query: 84  ---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                  E QI     ++  AL+ +H  +++HRDIKS NI L  DG+V+L
Sbjct: 117 QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQL 166

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 14/67 (20%)

Query: 159 ASGTVYTAIESSTG------------MEPK-KELIINEILVMRENKHPNIVNYLDSYLVG 205
           + G       +  G            M  K +E    E+ V+   KHPNIV Y +S+   
Sbjct: 36  SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN 95

Query: 206 EELWNIV 212
             L+ IV
Sbjct: 96  GSLY-IV 101

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  116 bits (293), Expect = 1e-29
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 14/131 (10%)

Query: 25  PITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET 84
            + +    + + II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ + 
Sbjct: 67  HLEIKPAIRNQ-IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 125

Query: 85  -CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL-----------S 131
             + E  +  V   V++ L +L    +++HRD+K  NIL+   G +KL           S
Sbjct: 126 GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185

Query: 132 KWNRFIATKLY 142
             N F+ T+ Y
Sbjct: 186 MANSFVGTRSY 196

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 16/121 (13%)

Query: 261 PPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL 320
            P  PP +     +          +   +   P            P    F+    I   
Sbjct: 228 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIV-- 285

Query: 321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 380
                         N+ P        S  FQDF+++CL +    RA    L+ H F+K +
Sbjct: 286 --------------NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331

Query: 381 R 381
            
Sbjct: 332 D 332

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 12/87 (13%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
             G V+      +G+               +  II E+ V+ E   P IV +  ++    
Sbjct: 45  NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 104

Query: 207 ELWNIVNYLDSYLVGEELWYTKPIEEP 233
           E+   + ++D   + + L     I E 
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQ 131

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  113 bits (286), Expect = 5e-29
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 26  ITLAQQPKKEL--IINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT 82
                +  K+    + E+    +  +HP  V    ++  G  L++  E   G SL     
Sbjct: 90  SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCE 148

Query: 83  E--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                + E Q+    R+ L AL  LHS  ++H D+K  NI LG  G  KL
Sbjct: 149 AWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKL 198

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 15/65 (23%)

Query: 329 LYLIATNKKP--------EIKEK-------EKLSQIFQDFLDQCLEEEVETRASASLLLK 373
           +  +A N +         ++++          LS   +  L   LE + + RA+A  LL 
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304

Query: 374 HPFLK 378
            P L+
Sbjct: 305 LPVLR 309

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  110 bits (276), Expect = 1e-27
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 25  PITLAQQPKKELIINEILV-MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
             T+  Q +K  ++ ++ + MR    P  V +  +     ++W+ ME +   SL     +
Sbjct: 41  RATVNSQEQKR-LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQ 98

Query: 84  T-----CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL 130
                  + E  +  +   +++ALE LHS   VIHRD+K  N+L+   G VK+
Sbjct: 99  VIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 151

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           PY    +  Q L  +     P++   +K S  F DF  QCL++  + R +   L++HPF 
Sbjct: 212 PYDSWGTPFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270

Query: 378 KIAR 381
            +  
Sbjct: 271 TLHE 274

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 16/91 (17%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILV-MRENKHPNIVNYLDSYLVG 205
           A G V       +G               +++ ++ ++ + MR    P  V +  +    
Sbjct: 19  AYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 78

Query: 206 EELWNIVNYLD---SYLVGEELWYTKPIEEP 233
            ++W  +  +D        + +   + I E 
Sbjct: 79  GDVWICMELMDTSLDKFYKQVIDKGQTIPED 109

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  110 bits (277), Expect = 1e-27
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPGGSLTDV- 80
           I   +Q  +E    E  + R   HPNI+  +   L       E W+++ +   G+L +  
Sbjct: 62  ILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

Query: 81  ----VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                    + E QI  +   + + LE +H+    HRD+K  NILLG +G   L
Sbjct: 122 ERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL 175

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 10/58 (17%), Positives = 15/58 (25%), Gaps = 11/58 (18%)

Query: 161 GTVYTAIESSTGM-----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
             V        G            +  +E    E  + R   HPNI+  +   L    
Sbjct: 43  SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG 100

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  110 bits (277), Expect = 1e-27
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 25  PITLAQQPKKELIINEILV-MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
             T+ ++ +K+ ++ ++ V MR +  P IV +  +     + W+ ME +   S       
Sbjct: 56  RSTVDEKEQKQ-LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKY 113

Query: 84  T------CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKL 130
                   + E  +  +    ++AL  L  N ++IHRDIK  NILL   G++KL
Sbjct: 114 VYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKL--SQIFQDFLDQCLEEEVETRASASLLLKHP 375
           PY    S    L  +     P++   E+   S  F +F++ CL ++   R     LLKHP
Sbjct: 228 PYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287

Query: 376 FLKIAR 381
           F+ +  
Sbjct: 288 FILMYE 293

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 17/92 (18%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILV-MRENKHPNIVNYLDSYLVG 205
           A G+V   +   +G             E +++ ++ ++ V MR +  P IV +  +    
Sbjct: 34  AYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE 93

Query: 206 EELWNIVNY----LDSYLVGEELWYTKPIEEP 233
            + W  +       D +           I E 
Sbjct: 94  GDCWICMELMSTSFDKFYKYVYSVLDDVIPEE 125

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  109 bits (274), Expect = 2e-27
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 15/114 (13%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYL-------------VGEELWVVMEYLPGGSLTD 79
           K   I++E++++    H  +V Y  ++L                 L++ MEY   G+L D
Sbjct: 45  KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD 104

Query: 80  VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++          +   + R++L+AL ++HS  +IHRD+K  NI +    +VK+ 
Sbjct: 105 LIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIG 158

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 14/76 (18%)

Query: 161 GTVYTAIESSTGM----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWN 210
           G V  A  +              E K   I++E++++    H  +V Y  ++L       
Sbjct: 20  GQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79

Query: 211 IVNYLDS----YLVGE 222
            +  +      ++  E
Sbjct: 80  PMTAVKKKSTLFIQME 95

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  108 bits (272), Expect = 6e-27
 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 25  PITLAQQPKKELIINEILV-MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE 83
             +  ++  K  I+ ++ V ++ +  P IV    +++   ++++ ME +   +       
Sbjct: 59  RRSGNKEENKR-ILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM 117

Query: 84  T-CMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKL 130
              + E  +  +   +++AL +L   + VIHRD+K  NILL   G +KL
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           PY    +  + L  +   + P +      S  FQ F+  CL ++   R   + LL+H F+
Sbjct: 228 PYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287

Query: 378 KIARP 382
           K    
Sbjct: 288 KRYET 292

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 12/88 (13%), Positives = 32/88 (36%), Gaps = 13/88 (14%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILV-MRENKHPNIVNYLDSYLVG 205
             G V+      TG             + + + I+ ++ V ++ +  P IV    +++  
Sbjct: 37  TCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN 96

Query: 206 EELWNIVNYLDSYLVGEELWYTKPIEEP 233
            +++  +  + +     +     PI E 
Sbjct: 97  TDVFIAMELMGTCAEKLKKRMQGPIPER 124

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  104 bits (262), Expect = 7e-26
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 14/119 (11%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVV 81
           +      + E   +++E+ ++RE KHPNIV Y D  +      L++VMEY  GG L  V+
Sbjct: 39  LDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98

Query: 82  TE-----TCMDEGQIAAVCREVLQALEFLHS-----NQVIHRDIKSDNILLGLDGSVKL 130
           T+       +DE  +  V  ++  AL+  H      + V+HRD+K  N+ L    +VKL
Sbjct: 99  TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 157

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 13/56 (23%)

Query: 161 GTVYTAIESSTG------------MEPK-KELIINEILVMRENKHPNIVNYLDSYL 203
           G        S G            M    K+++++E+ ++RE KHPNIV Y D  +
Sbjct: 20  GRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRII 75

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  104 bits (261), Expect = 9e-26
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 19/117 (16%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYL----------------VGEELWVVMEYLPGGS 76
             E    E+  + +  H NIV+Y   +                   + L++ ME+   G+
Sbjct: 47  NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGT 106

Query: 77  LTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L   + +     +D+     +  ++ + ++++HS ++I+RD+K  NI L     VK+
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI 163

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 7/72 (9%)

Query: 161 GTVYTAIESSTG-------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVN 213
           G V+ A     G       ++   E    E+  + +  H NIV+Y   +   +      +
Sbjct: 25  GQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84

Query: 214 YLDSYLVGEELW 225
              S    + L+
Sbjct: 85  KNSSRSKTKCLF 96

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 99.7 bits (249), Expect = 5e-24
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 21/136 (15%)

Query: 12  SDDRRFFSKILSNPITLAQQPK-KELIINEILVMRENKHPNIVNYLDSYL---------- 60
            DD  +  K     I L  +   +E ++ E+  + + +HP IV Y +++L          
Sbjct: 28  VDDCNYAIKR----IRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83

Query: 61  --VGEELWVVMEYLPGGSLTDVVTETC----MDEGQIAAVCREVLQALEFLHSNQVIHRD 114
                 L++ M+     +L D +   C     +      +  ++ +A+EFLHS  ++HRD
Sbjct: 84  SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRD 143

Query: 115 IKSDNILLGLDGSVKL 130
           +K  NI   +D  VK+
Sbjct: 144 LKPSNIFFTMDDVVKV 159

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 92.9 bits (231), Expect = 1e-21
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 49  HPNIVNYLDSYLVGEE---LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFL 105
            P +   LD   V        VV E++ GGSL +V  +T           + +  A +  
Sbjct: 90  KPGVARVLD---VVHTRAGGLVVAEWIRGGSLQEVA-DTSPSPVGAIRAMQSLAAAADAA 145

Query: 106 HSNQVIHRDIKSDNILLGLDGSVKL 130
           H   V         + + +DG V L
Sbjct: 146 HRAGVALSIDHPSRVRVSIDGDVVL 170

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 92.7 bits (231), Expect = 2e-21
 Identities = 23/90 (25%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
           +E I  E+ ++R+  H N++   D Y    ++ +++E + GG L D +  +  + E +  
Sbjct: 59  REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +  +++L  + +LH+ ++ H D+K +NI+L
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 17/59 (28%)

Query: 161 GTVYTAIESSTGME-----------------PKKELIINEILVMRENKHPNIVNYLDSY 202
             V    E STG+E                   +E I  E+ ++R+  H N++   D Y
Sbjct: 26  AIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY 84

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPN--IVNYLDSYLVGEELWVVMEYLPGGSLTDV- 80
           + L +   + L    NEI  + + +  +  I+   D  +  + +++VME      L    
Sbjct: 60  VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 118

Query: 81  VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  +D  +  +  + +L+A+  +H + ++H D+K  N L+  DG +KL 
Sbjct: 119 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLI 168

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 238 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296

Query: 378 KI 379
           +I
Sbjct: 297 QI 298

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 91.9 bits (229), Expect = 3e-21
 Identities = 26/90 (28%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
           +E I  E+ ++RE +HPNI+   D +    ++ +++E + GG L D +  +  + E +  
Sbjct: 52  REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              +++L  + +LHS ++ H D+K +NI+L
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIML 141

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 17/59 (28%)

Query: 161 GTVYTAIESSTGME-----------------PKKELIINEILVMRENKHPNIVNYLDSY 202
             V    +  TG E                   +E I  E+ ++RE +HPNI+   D +
Sbjct: 19  AIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF 77

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 92.8 bits (231), Expect = 3e-21
 Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPN--IVNYLDSYLVGEELWVVMEYLPGGSLTDV- 80
           + L +   + L    NEI  + + +  +  I+   D  +  + +++VME      L    
Sbjct: 41  VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 99

Query: 81  VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  +D  +  +  + +L+A+  +H + ++H D+K  N L+  DG +KL 
Sbjct: 100 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLI 149

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 219 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277

Query: 378 KIARP 382
           +I   
Sbjct: 278 QIQTH 282

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 92.1 bits (229), Expect = 4e-21
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSY--LVGEELWVVMEYLPGGSLTDVVTE----TCM 86
             ++ + E  V+++  H NIV               ++ME+ P GSL  V+ E      +
Sbjct: 50  PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL----DGSVKLS 131
            E +   V R+V+  +  L  N ++HR+IK  NI+  +        KL+
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 92.4 bits (230), Expect = 5e-21
 Identities = 25/90 (27%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
           +E I  E+ ++R+  HPNI+   D Y    ++ +++E + GG L D +  +  + E +  
Sbjct: 59  REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +  +++L  + +LH+ ++ H D+K +NI+L
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIML 148

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 17/59 (28%)

Query: 161 GTVYTAIESSTGME-----------------PKKELIINEILVMRENKHPNIVNYLDSY 202
             V    E STG+E                   +E I  E+ ++R+  HPNI+   D Y
Sbjct: 26  AIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY 84

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 91.9 bits (229), Expect = 5e-21
 Identities = 25/90 (27%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
           +E I  E+ +++E +HPN++   + Y    ++ +++E + GG L D +  +  + E +  
Sbjct: 58  REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              +++L  + +LHS Q+ H D+K +NI+L
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIML 147

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 17/59 (28%)

Query: 161 GTVYTAIESSTGME------PKK-----------ELIINEILVMRENKHPNIVNYLDSY 202
             V    E STG++       K+           E I  E+ +++E +HPN++   + Y
Sbjct: 25  AVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 92.6 bits (230), Expect = 5e-21
 Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 26  ITLAQQPKKEL--IINEILVMRENKHPN--IVNYLDSYLVGEELWVVMEYLPGGSLTDV- 80
           + L +   + L    NEI  + + +  +  I+   D  +  + +++VME      L    
Sbjct: 88  VNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 146

Query: 81  VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +  +D  +  +  + +L+A+  +H + ++H D+K  N L+  DG +KL 
Sbjct: 147 KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLI 196

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 46.3 bits (110), Expect = 9e-06
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           P+  I++    L+ I  +   EI+  +   +  QD L  CL+ + + R S   LL HP++
Sbjct: 266 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324

Query: 378 KIARP 382
           +I   
Sbjct: 325 QIQTH 329

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 91.2 bits (227), Expect = 8e-21
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 49  HPNIVNYLDSYLVGEE---LWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEF 104
            P++V   D    GE    L+V M  + G  L  ++     +   +  A+ R++  AL+ 
Sbjct: 93  EPHVVPIHD---FGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA 149

Query: 105 LHSNQVIHRDIKSDNILLGLDGSVKL 130
            H+    HRD+K +NIL+  D    L
Sbjct: 150 AHAAGATHRDVKPENILVSADDFAYL 175

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 91.8 bits (228), Expect = 1e-20
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSY--LVGEELWVVMEYLPGGSLTDVVTE----TCM 86
             ++ + E  V+++  H NIV               ++ME+ P GSL  V+ E      +
Sbjct: 50  PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL----DGSVKLS 131
            E +   V R+V+  +  L  N ++HR+IK  NI+  +        KL+
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  E+ +    +HPNI+     +     +++++EY P G++   +   +  DE + A   
Sbjct: 56  LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            E+  AL + HS +VIHRDIK +N+LLG  G +K++
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 14  DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP 73
            +  F K   +      +   E I NEI +++   HPNI+   D +   +  ++V E+  
Sbjct: 70  KKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE 129

Query: 74  GGSLTD-VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           GG L + ++     DE   A + +++L  + +LH + ++HRDIK +NILL
Sbjct: 130 GGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILL 179

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 26/92 (28%), Positives = 54/92 (58%), Gaps = 2/92 (2%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETCMDEGQ 90
            + L+  EI ++   +H NI++  +S+   EEL ++ E++ G  + +    +   ++E +
Sbjct: 44  DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNERE 103

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           I +   +V +AL+FLHS+ + H DI+ +NI+ 
Sbjct: 104 IVSYVHQVCEALQFLHSHNIGHFDIRPENIIY 135

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 10/52 (19%)

Query: 161 GTVYTAIESSTGME------PKK----ELIINEILVMRENKHPNIVNYLDSY 202
           G V+  +E+S+           K     L+  EI ++   +H NI++  +S+
Sbjct: 19  GIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 89.2 bits (222), Expect = 3e-20
 Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGSLTDVVTETCMDEGQIA 92
           E +  EI ++++  HPN+V  ++      E  L++V E +  G + +V T   + E Q  
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +++++ +E+LH  ++IHRDIK  N+L+G DG +K++
Sbjct: 141 FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIA 179

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 90.1 bits (224), Expect = 3e-20
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQI 91
           KE + NEI VM +  H N++   D++    ++ +VMEY+ GG L D + +    + E   
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               +++ + +  +H   ++H D+K +NIL 
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILC 220

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 11/53 (20%)

Query: 161 GTVYTAIESSTGME------PK-----KELIINEILVMRENKHPNIVNYLDSY 202
           G V+   E++TG++             KE + NEI VM +  H N++   D++
Sbjct: 103 GQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCM 86
           + Q+  KE ++ E+ ++++  HPNI+   + +      ++V E   GG L D +++    
Sbjct: 64  VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            E   A + R+VL  + ++H N+++HRD+K +N+LL
Sbjct: 124 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 14/58 (24%)

Query: 159 ASGTVYTAIESSTGME------PKK--------ELIINEILVMRENKHPNIVNYLDSY 202
           + G V    +  TG E       K+        E ++ E+ ++++  HPNI+   + +
Sbjct: 38  SFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 89.4 bits (222), Expect = 5e-20
 Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 14/119 (11%)

Query: 26  ITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVG--------EELWVVMEYLPGGS 76
           +   ++ K   II E+  M++ + HPNIV +  +  +G         E  ++ E   G  
Sbjct: 61  LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQL 120

Query: 77  LTDVV---TETCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKL 130
           +  +    +   +    +  +  +  +A++ +H  +  +IHRD+K +N+LL   G++KL
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL 179

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 40.1 bits (94), Expect = 8e-04
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 14/76 (18%)

Query: 161 GTVYTAIESSTG-----------MEPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEEL 208
             VY A +  +G            E K   II E+  M++ + HPNIV +  +  +G+E 
Sbjct: 42  AFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE 101

Query: 209 WNIVNYLDSYLVGEEL 224
            +       +L+  EL
Sbjct: 102 SDTGQAE--FLLLTEL 115

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 91.1 bits (226), Expect = 5e-20
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETCMDEGQI 91
           KE +  EI  M   +HP +VN  D++    E+ ++ E++ GG L +        M E + 
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA 257

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               R+V + L  +H N  +H D+K +NI+ 
Sbjct: 258 VEYMRQVCKGLCHMHENNYVHLDLKPENIMF 288

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 11/53 (20%)

Query: 161 GTVYTAIESSTGME------PK-----KELIINEILVMRENKHPNIVNYLDSY 202
           G V+   E +TG               KE +  EI  M   +HP +VN  D++
Sbjct: 171 GVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 89.8 bits (223), Expect = 6e-20
 Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 2/91 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETCMDEGQI 91
           K  + NEI +M +  HP ++N  D++    E+ +++E+L GG L D     +  M E ++
Sbjct: 92  KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 151

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               R+  + L+ +H + ++H DIK +NI+ 
Sbjct: 152 INYMRQACEGLKHMHEHSIVHLDIKPENIMC 182

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 11/53 (20%)

Query: 161 GTVYTAIESSTGME------PK-----KELIINEILVMRENKHPNIVNYLDSY 202
           G V+  +E +TG               K  + NEI +M +  HP ++N  D++
Sbjct: 65  GVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 90.2 bits (224), Expect = 6e-20
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 35  ELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMD--EGQI 91
                E+ ++RE ++HPN++ Y  +    +  ++ +E     +L + V +        + 
Sbjct: 62  SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEP 120

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK 132
             + ++    L  LHS  ++HRD+K  NIL+ +  +    K
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIK 161

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 326 RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           RQA  L+       +  ++    I ++ +++ +  + + R SA  +LKHPF  
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 88.1 bits (219), Expect = 7e-20
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 7/86 (8%)

Query: 49  HPNIVNYLDSYLVGEE---LWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEF 104
           H NIV+ +D   V EE    ++VMEY+ G +L++ +     +          ++L  ++ 
Sbjct: 70  HQNIVSMID---VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126

Query: 105 LHSNQVIHRDIKSDNILLGLDGSVKL 130
            H  +++HRDIK  NIL+  + ++K+
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKI 152

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 90.7 bits (225), Expect = 8e-20
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 13/90 (14%)

Query: 49  HPNIVNYLDSYLVGEE--------LWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQ 100
           HP+IV   +     E          ++VMEY+ G SL     +  +   +  A   E+L 
Sbjct: 138 HPSIVQIFN---FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-LPVAEAIAYLLEILP 193

Query: 101 ALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           AL +LHS  +++ D+K +NI+L  +  +KL
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLTEEQ-LKL 222

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 89.8 bits (223), Expect = 9e-20
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEG 89
                 ++ E+ V++   HPNI+   D +      ++VME   GG L D ++     +E 
Sbjct: 77  TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV 136

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
             A + ++VL  + +LH + ++HRD+K +N+LL
Sbjct: 137 DAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLL 169

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKK-------ELIINEILVMRENKHPNIVNYLDSY 202
           A G V    +  T +E       K          ++ E+ V++   HPNI+   D +
Sbjct: 49  AYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF 105

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           +  EI +    +HPNI+   + +   + +++++E+ P G L   +      DE + A   
Sbjct: 61  LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            E+  AL + H  +VIHRDIK +N+L+G  G +K++
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIA 156

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 88.0 bits (218), Expect = 1e-19
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 14/106 (13%)

Query: 40  EILVMRENKHPNIVNYL-----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
            I  +   +H NI  ++      +     E  +VMEY P GSL   ++    D      +
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL 116

Query: 95  CREVLQALEFLHS---------NQVIHRDIKSDNILLGLDGSVKLS 131
              V + L +LH+           + HRD+ S N+L+  DG+  +S
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDE 88
           Q  +E  + E+ ++R+ + HPNI+   D+Y      ++V + +  G L D +  +  + E
Sbjct: 64  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 123

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +   + R +L+ +  LH   ++HRD+K +NILL  D ++KL+
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT 166

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
              I+ E+ ++++  HPNI+   +        ++V E   GG L D ++      E   A
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + ++V   + ++H + ++HRD+K +NILL
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILL 154

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKK-------ELIINEILVMRENKHPNIVNYLDSY 202
           + G V    +  T  E       K          I+ E+ ++++  HPNI+   +  
Sbjct: 34  SFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
              I+ E+ ++++  HPNI+   +        ++V E   GG L D ++      E   A
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + ++V   + ++H + ++HRD+K +NILL
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILL 154

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKK-------ELIINEILVMRENKHPNIVNYLDSY 202
           + G V    +  T  E       K          I+ E+ ++++  HPNI+   +  
Sbjct: 34  SFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 87.4 bits (217), Expect = 1e-19
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGSLTDVVTETCMDEGQIAAVC 95
           E+      +H NI+ ++ S +       +LW++  Y   GSL D +  T +D      + 
Sbjct: 52  ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIV 111

Query: 96  REVLQALEFLHSNQ--------VIHRDIKSDNILLGLDGSVKLS 131
             +   L  LH           + HRD+KS NIL+  +G   ++
Sbjct: 112 LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA 155

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 88.2 bits (219), Expect = 2e-19
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 18  FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
            SK      +  +      +  EI ++++  HP I+   + +   E+ ++V+E + GG L
Sbjct: 168 ISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL 226

Query: 78  TD-VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
            D VV    + E        ++L A+++LH N +IHRD+K +N+LL     D  +K++
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 86.9 bits (216), Expect = 2e-19
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 49  HPNIVNYLDSYLVGEEL-------WVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQ 100
           HP IV   D    GE         ++VMEY+ G +L D+V     M   +   V  +  Q
Sbjct: 71  HPAIVAVYD---TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127

Query: 101 ALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           AL F H N +IHRD+K  NI++    +VK+
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKV 157

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 85.7 bits (213), Expect = 3e-19
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
            +    EI +M+   HPNI+   +++    ++++VME   GG L + VV +    E   A
Sbjct: 50  VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + ++VL A+ + H   V HRD+K +N L 
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 86.7 bits (215), Expect = 4e-19
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 12/104 (11%)

Query: 40  EILVMRENKHPNIVNYL----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVC 95
           EI      +H NI+ ++           +L+++ +Y   GSL D +  T +D   +  + 
Sbjct: 81  EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLA 140

Query: 96  REVLQALEFLHSNQ--------VIHRDIKSDNILLGLDGSVKLS 131
              +  L  LH+          + HRD+KS NIL+  +G+  ++
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTET 84
           I  +   +   + NEI V+++ KH NIV   D Y      ++VM+ + GG L D ++   
Sbjct: 42  IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              E   + V ++VL A+++LH N ++HRD+K +N+L 
Sbjct: 102 VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLY 139

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 11/53 (20%)

Query: 161 GTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSY 202
             V+   +  TG              +   + NEI V+++ KH NIV   D Y
Sbjct: 23  SEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 86.6 bits (214), Expect = 6e-19
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 26/154 (16%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------TETCM 86
           +  +    +  ++ +     + +  ++L      +V E    G+L + +       E  M
Sbjct: 110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-----------LDGSVKLSKWNR 135
            +G + +    +L  +E +H  ++IH DIK DN +LG           L   + L    +
Sbjct: 170 PQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ 229

Query: 136 FIATKLYIEISKVIIYCWDWTAVASGTV-YTAIE 168
            I  KL+ + +     C         T  +  +E
Sbjct: 230 SIDMKLFPKGTIFTAKC--------ETSGFQCVE 255

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 85.8 bits (213), Expect = 9e-19
 Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQI 91
            K+++  EI V+    HPNI+   + +    E+ +V+E + GG L D +V +    E   
Sbjct: 91  DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA 150

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           A   +++L+A+ +LH N ++HRD+K +N+L 
Sbjct: 151 ADAVKQILEAVAYLHENGIVHRDLKPENLLY 181

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 9/51 (17%)

Query: 161 GTVYTAIESSTGME------PKK---ELIINEILVMRENKHPNIVNYLDSY 202
             VY   +  T          K    +++  EI V+    HPNI+   + +
Sbjct: 67  SIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF 117

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 84.5 bits (210), Expect = 9e-19
 Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
            + +  E  + R+ +HPNIV   DS       ++V + + GG L + +V      E   +
Sbjct: 49  FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 108

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
              +++L+++ + HSN ++HR++K +N+LL       +VKL+
Sbjct: 109 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKKEL-------IINEILVMRENKHPNIVNYLDSY 202
           A   V   +  +TG+E        K+L       +  E  + R+ +HPNIV   DS 
Sbjct: 18  AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 74

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 85.2 bits (211), Expect = 1e-18
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 14/107 (13%)

Query: 39  NEILVMRENKHPNIVNYL----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
            E+  +   KH NI+ ++        V  +LW++  +   GSL+D +    +   ++  +
Sbjct: 67  YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHI 126

Query: 95  CREVLQALEFLHSNQ----------VIHRDIKSDNILLGLDGSVKLS 131
              + + L +LH +           + HRDIKS N+LL  + +  ++
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 18  FSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
            SK      +  +      +  EI ++++  HP I+   + +   E+ ++V+E + GG L
Sbjct: 43  ISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL 101

Query: 78  TD-VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
            D VV    + E        ++L A+++LH N +IHRD+K +N+LL     D  +K++
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 21/95 (22%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCR 96
            E++  R+ +H N+V ++ + +    L ++     G +L  VV   +  +D  +   + +
Sbjct: 78  REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ 137

Query: 97  EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           E+++ + +LH+  ++H+D+KS N+    +G V ++
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVIT 171

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 84.3 bits (209), Expect = 2e-18
 Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV----VTETCMDEGQIAAV 94
            E+ +M+  +HPNIV ++ +      L +V EYL  GSL  +         +DE +  ++
Sbjct: 83  REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142

Query: 95  CREVLQALEFLHSN--QVIHRDIKSDNILLGLDGSVKLS 131
             +V + + +LH+    ++HR++KS N+L+    +VK+ 
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVC 181

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-----TCMDE 88
            E +  E  +    KHP+IV  L++Y     L++V E++ G  L   + +         E
Sbjct: 70  TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              +   R++L+AL + H N +IHRD+K   +LL
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 16/60 (26%)

Query: 159 ASGTVYTAIESSTGME------PKKEL----------IINEILVMRENKHPNIVNYLDSY 202
               V   I   TG +         +           +  E  +    KHP+IV  L++Y
Sbjct: 36  PFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY 95

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-----CMD 87
             E I  EI V++   HPNI+   + +     +++VME   GG L + +         + 
Sbjct: 63  PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           EG +A + ++++ AL + HS  V+H+D+K +NIL 
Sbjct: 123 EGYVAELMKQMMNALAYFHSQHVVHKDLKPENILF 157

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
            + +  E  + R+ +HPNIV   DS       ++V + + GG L + +V      E   +
Sbjct: 72  FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 131

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              +++L+++ + HSN ++HR++K +N+LL
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLL 161

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKKEL-------IINEILVMRENKHPNIVNYLDSY 202
           A   V   +  +TG+E        K+L       +  E  + R+ +HPNIV   DS 
Sbjct: 41  AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 97

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 20/97 (20%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETCMDEGQIAAV 94
           + NE+ +  + KHP+I+   + +     +++V+E    G +            E +    
Sbjct: 58  VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF 117

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +++  + +LHS+ ++HRD+   N+LL  + ++K++
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA 154

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 7/105 (6%)

Query: 34  KELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEG 89
           +  I++EI V+      P ++N  + Y    E+ +++EY  GG +  +        + E 
Sbjct: 72  RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN 131

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
            +  + +++L+ + +LH N ++H D+K  NILL      G +K+ 
Sbjct: 132 DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV 176

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 31/103 (30%), Positives = 61/103 (59%), Gaps = 2/103 (1%)

Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDE 88
           +  +E    E  ++R+   HP+I+  +DSY     +++V + +  G L D +  +  + E
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +  ++ R +L+A+ FLH+N ++HRD+K +NILL  +  ++LS
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLS 242

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 11/99 (11%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDV--VTETCMDEGQIA 92
           NE+ V+R+ +H NI+       +G     +L +V ++  G SL      +ET  +  ++ 
Sbjct: 69  NEVGVLRKTRHVNILL-----FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLI 123

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            + R+  + +++LH+  +IHRD+KS+NI L  D +VK+ 
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG 162

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
           +E +  EI + R   H ++V +   +   + ++VV+E     SL +       + E +  
Sbjct: 59  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR 118

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              R+++   ++LH N+VIHRD+K  N+ L  D  VK+ 
Sbjct: 119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG 157

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 83.5 bits (207), Expect = 4e-18
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETC 85
            L +  ++E +  EI + R   H ++V +   +   + ++VV+E     SL +       
Sbjct: 78  LLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA 137

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + E +     R+++   ++LH N+VIHRD+K  N+ L  D  VK+ 
Sbjct: 138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG 183

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 84.7 bits (210), Expect = 4e-18
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEG 89
               + +  E  + R  KHPNIV   DS       +++ + + GG L + +V      E 
Sbjct: 51  ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 110

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
             +   +++L+A+   H   V+HR++K +N+LL
Sbjct: 111 DASHCIQQILEAVLHCHQMGVVHRNLKPENLLL 143

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 13/57 (22%)

Query: 159 ASGTVYTAIESSTGME------PKK-------ELIINEILVMRENKHPNIVNYLDSY 202
           A   V   ++   G E        K       + +  E  + R  KHPNIV   DS 
Sbjct: 23  AFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI 79

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQ 90
            +     EI  ++    HPNIV   + +      ++VME L GG L + +  +    E +
Sbjct: 48  MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETE 107

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            + + R+++ A+  +H   V+HRD+K +N+L 
Sbjct: 108 ASYIMRKLVSAVSHMHDVGVVHRDLKPENLLF 139

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 83.3 bits (206), Expect = 6e-18
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 12/104 (11%)

Query: 40  EILVMRENKHPNIVNYL----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVC 95
           EI      +H NI+ ++           +LW+V +Y   GSL D +    +    +  + 
Sbjct: 86  EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLA 145

Query: 96  REVLQALEFLHSNQ--------VIHRDIKSDNILLGLDGSVKLS 131
                 L  LH           + HRD+KS NIL+  +G+  ++
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 82.8 bits (205), Expect = 8e-18
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 11/111 (9%)

Query: 32  PKKELIINEILVM-RENKHPNIVN----YLDSYLVGEELWVVMEYLPGGSLTDVVTE--- 83
                   E+    + +  P+IV     Y + +     L ++ME + GG L   + E   
Sbjct: 63  YDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD 122

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
               E + A + R++  A++FLHS+ + HRD+K +N+L      D  +KL+
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT 173

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 12/71 (16%)

Query: 159 ASGTVYTAIESSTGME------PKKELIINEILVM-RENKHPNIVNYLDSYLVGEELWNI 211
            +G V       TG +              E+    + +  P+IV  LD Y   E + + 
Sbjct: 41  VNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVY---ENMHHG 97

Query: 212 VNYLDSYLVGE 222
              L   ++ E
Sbjct: 98  KRCL--LIIME 106

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 84.3 bits (208), Expect = 9e-18
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 13/111 (11%)

Query: 34  KELIINEILVMRENKHPNIVNYLD------SYLVGEELWVVMEYLPGGSLTDVVTE---- 83
           +E    EI +M++  HPN+V+  +           +   + MEY  GG L   + +    
Sbjct: 56  RERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC 115

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
             + EG I  +  ++  AL +LH N++IHRD+K +NI+L         K+ 
Sbjct: 116 CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII 166

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG------GSLTDVVTETCMDEGQI 91
           I EI +M+E KH NIV   D      +L +V E++         S T   T   ++   +
Sbjct: 51  IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLV 110

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                ++LQ L F H N+++HRD+K  N+L+   G +KL
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKL 149

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)

Query: 32  PKKELIINEILVM-RENKHPNIVN----YLDSYLVGEELWVVMEYLPGGSLTDVVTE--- 83
                   E+ +  R ++ P+IV     Y + Y   + L +VME L GG L   + +   
Sbjct: 52  QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 111

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               E + + + + + +A+++LHS  + HRD+K +N+L 
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 159 ASGTVYTAIESSTGME------PKKELIINEILVM-RENKHPNIVNYLDSYLVGEELWNI 211
            +G V       T  +              E+ +  R ++ P+IV  +D Y   E L+  
Sbjct: 30  INGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY---ENLYAG 86

Query: 212 VNYLDSYLVGE 222
              L   +V E
Sbjct: 87  RKCL--LIVME 95

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG--GSLTDVVTETCMDEGQIAAVC 95
           I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I +  
Sbjct: 50  IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            ++LQ L F HS++V+HRD+K  N+L+  +G++KL
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 34  KELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQI 91
           +  +  E+ ++ +   H N++  ++ +   +  ++V E + GGS+   +      +E + 
Sbjct: 54  RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLS 131
           + V ++V  AL+FLH+  + HRD+K +NIL         VK+ 
Sbjct: 114 SVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC 156

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K   +          E +  E  +    KHPNI+      L    L +VME+  GG L  
Sbjct: 36  KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNR 95

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSN---QVIHRDIKSDNILLG 123
           V++   +    +     ++ + + +LH      +IHRD+KS NIL+ 
Sbjct: 96  VLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 81.8 bits (202), Expect = 4e-17
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 10/99 (10%)

Query: 33  KKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-------- 83
             ++ + EI ++ E+  HPN++ Y  S      L++ +E     +L D+V          
Sbjct: 51  FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENL 109

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               E    ++ R++   +  LHS ++IHRD+K  NIL+
Sbjct: 110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV 148

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 32/113 (28%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           KI+    T       + +  E+ +M+   HPNIV   +     + L+++MEY  GG + D
Sbjct: 46  KIIDK--TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD 103

Query: 80  -VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +V    M E +  +  R+++ A+++ H  +++HRD+K++N+LL  D ++K++
Sbjct: 104 YLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIA 156

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 80.4 bits (199), Expect = 5e-17
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 33  KKELIINEILVM-RENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQ 90
            K     EI ++ R  +HPNI+   D Y  G+ ++VV E + GG L D ++ +    E +
Sbjct: 58  SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE 117

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            +AV   + + +E+LH+  V+HRD+K  NIL 
Sbjct: 118 ASAVLFTITKTVEYLHAQGVVHRDLKPSNILY 149

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 79.2 bits (196), Expect = 6e-17
 Identities = 20/105 (19%), Positives = 47/105 (44%), Gaps = 17/105 (16%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVG-------EELWVVMEYLPGGSLTDVV---TETCMDE 88
            E   +R   HPN++      ++G           ++  ++P GSL +V+   T   +D+
Sbjct: 56  EECPRLRIFSHPNVL-----PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ 110

Query: 89  GQIAAVCREVLQALEFLHS--NQVIHRDIKSDNILLGLDGSVKLS 131
            Q      ++ + + FLH+    +    + S ++++  D + ++S
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS 155

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 79.7 bits (197), Expect = 6e-17
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 9/108 (8%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV----TE 83
           +  + +++  I E+  +    HPNIV    + L    + +VMEY  GGSL +V+      
Sbjct: 39  IESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPL 96

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQ---VIHRDIKSDNILLGLDGSV 128
                    + C +  Q + +LHS Q   +IHRD+K  N+LL   G+V
Sbjct: 97  PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 79.3 bits (196), Expect = 9e-17
 Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVCRE 97
           E+ VMR  +HPN++ ++      + L  + EY+ GG+L  ++   ++     Q  +  ++
Sbjct: 57  EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +   + +LHS  +IHRD+ S N L+  + +V ++
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVA 150

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 79.1 bits (196), Expect = 1e-16
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-----VTETCMDEGQIA 92
           I EI +++E  HPNIV+ +D       L +V E++      D+       +T + + QI 
Sbjct: 67  IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQDSQIK 122

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               ++L+ +   H ++++HRD+K  N+L+  DG++KL
Sbjct: 123 IYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 78.7 bits (195), Expect = 1e-16
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-----VTETCMDEGQIA 92
           I EI +++E KH NIV   D     + L +V E+L      D+     V E  ++     
Sbjct: 48  IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +   ++L  + + H  +V+HRD+K  N+L+  +G +K+
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)

Query: 32  PKKELIINEILVM-RENKHPNIVN----YLDSYLVGEELWVVMEYLPGGSLTDVVTE--- 83
                   E+ +  R ++ P+IV     Y + Y   + L +VME L GG L   + +   
Sbjct: 96  QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 155

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
               E + + + + + +A+++LHS  + HRD+K +N+L 
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 194

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 159 ASGTVYTAIESSTGME------PKKELIINEILVM-RENKHPNIVNYLDSYLVGEELWNI 211
            +G V       T  +              E+ +  R ++ P+IV  +D Y   E L+  
Sbjct: 74  INGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY---ENLYAG 130

Query: 212 VNYLDSYLVGE 222
              L   +V E
Sbjct: 131 RKCL--LIVME 139

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAA 93
           E I  EI + +   H N+V +      G   ++ +EY  GG L D +  +  M E     
Sbjct: 50  ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +++  + +LH   + HRDIK +N+LL    ++K+S
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 79.2 bits (195), Expect = 1e-16
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 10  FSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVM 69
           +  +    + K  S    L+     +    +I  M      N V  L        L++ M
Sbjct: 81  WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQM 140

Query: 70  EYLPGGSLTDVVTE----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           +     +L D +         + G    +  ++ +A+EFLHS  ++HRD+K  NI   +D
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD 200

Query: 126 GSVKL 130
             VK+
Sbjct: 201 DVVKV 205

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 78.3 bits (194), Expect = 1e-16
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETC---MDEGQIA 92
           + EI +++E KH NIV   D     ++L +V E+       D+    ++C   +D   + 
Sbjct: 49  LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVK 104

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +   ++L+ L F HS  V+HRD+K  N+L+  +G +KL
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 4/115 (3%)

Query: 19  SKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVME-YLPGGSL 77
            K+L +      +  K  +  EI ++   +H NI+  LD +       +VME +  G  L
Sbjct: 60  EKVLEDCWIEDPKLGK--VTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDL 117

Query: 78  TD-VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +     +DE   + + R+++ A+ +L    +IHRDIK +NI++  D ++KL 
Sbjct: 118 FAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI 172

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 10/117 (8%)

Query: 19  SKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYLPGGS 76
            K+   P   A       +  EI ++R  +H N++  +D     E+  +++VMEY   G 
Sbjct: 41  KKLRRIPNGEAN------VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM 94

Query: 77  --LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             + D V E      Q      +++  LE+LHS  ++H+DIK  N+LL   G++K+S
Sbjct: 95  QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 15/117 (12%)

Query: 20  KILSNPITLAQQPKKELI---INEILVMRENKHPNIVNYLDSYLVG---EELWVVMEYLP 73
           K L    +  +    E       E+ +M    HPNIV      L G       +VME++P
Sbjct: 50  KSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK-----LYGLMHNPPRMVMEFVP 104

Query: 74  GGSLTDVV--TETCMDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNILLGLDG 126
            G L   +      +       +  ++   +E++ +    ++HRD++S NI L    
Sbjct: 105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD 161

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD--VVTETC---MDEGQIA 92
           + EI +++E  HPNI+  LD++     + +V +++     TD  V+ +     +    I 
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME----TDLEVIIKDNSLVLTPSHIK 115

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           A     LQ LE+LH + ++HRD+K +N+LL  +G +KL
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL 153

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 78.2 bits (193), Expect = 4e-16
 Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 23  SNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL----- 77
           SN   ++ + K +   NE+ ++ + K+   +         +E++++ EY+   S+     
Sbjct: 76  SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE 135

Query: 78  ----TDVVTETCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLS 131
                D      +    I  + + VL +  ++H+   + HRD+K  NIL+  +G VKLS
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS 194

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 77.4 bits (191), Expect = 5e-16
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAA 93
           E I  EI + +   H N+V +      G   ++ +EY  GG L D +  +  M E     
Sbjct: 50  ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 109

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +++  + +LH   + HRDIK +N+LL    ++K+S
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 76.8 bits (190), Expect = 6e-16
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETC---MDEGQIA 92
           + EI ++++ KHPN+VN L+ +     L +V EY        V    +     + E  + 
Sbjct: 50  LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD----HTVLHELDRYQRGVPEHLVK 105

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           ++  + LQA+ F H +  IHRD+K +NIL+     +KL
Sbjct: 106 SITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL 143

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 76.9 bits (190), Expect = 7e-16
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETC---MDEGQIA 92
           I E+ ++++ KH NIV   D     + L +V EYL      D+    + C   ++   + 
Sbjct: 48  IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               ++L+ L + H  +V+HRD+K  N+L+   G +KL
Sbjct: 104 LFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKL 141

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 37  IINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVC 95
           I  EI  ++  +HP+I+          + ++VMEY+ GG L D +     ++E +   + 
Sbjct: 58  IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +++L A+++ H + V+HRD+K +N+LL    + K++
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 41/139 (29%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--------- 83
             E I  E+ +M++  HPNI    + Y   + + +VME   GG L D +           
Sbjct: 71  DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130

Query: 84  --------------------------------TCMDEGQIAAVCREVLQALEFLHSNQVI 111
                                               E  I+ + R++  AL +LH+  + 
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190

Query: 112 HRDIKSDNILLGLDGSVKL 130
           HRDIK +N L   + S ++
Sbjct: 191 HRDIKPENFLFSTNKSFEI 209

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETC---MDEGQIA 92
           + EI ++++ +H N+VN L+     +  ++V E++       +    E     +D   + 
Sbjct: 72  MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD----HTILDDLELFPNGLDYQVVQ 127

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               +++  + F HS+ +IHRDIK +NIL+   G VKL
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKL 165

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 9/121 (7%)

Query: 20  KIL--SNPITLAQQPKKELIINEILVMR----ENKHPNIVNYLDSYLVGEELWVVMEY-L 72
           K++  +  +  +          E+ ++        HP ++  LD +   E   +V+E  L
Sbjct: 62  KVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPL 121

Query: 73  PGGSLTD-VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKL 130
           P   L D +  +  + EG       +V+ A++  HS  V+HRDIK +NIL+ L  G  KL
Sbjct: 122 PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL 181

Query: 131 S 131
            
Sbjct: 182 I 182

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 74.1 bits (183), Expect = 4e-15
 Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 10/103 (9%)

Query: 38  INEILVMRE---NKHPNIVNYLD-----SYLVGEELWVVMEYLPG--GSLTDVVTETCMD 87
           + E+ ++R     +HPN+V  +D           ++ +V E++     +  D      + 
Sbjct: 59  VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              I  + R+ L+ L+FLH+N ++HRD+K +NIL+   G+VKL
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 161

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 33  KKELIIN---------EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
           +KE+II          E  V++  +HP +     ++   + L  VMEY  GG L   +  
Sbjct: 39  RKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 98

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           E    E +      E++ ALE+LHS  V++RDIK +N++L  DG +K+
Sbjct: 99  ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 26/93 (27%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREV 98
           EI  ++  +HP+I+          ++++VMEY+ GG L D +     +DE +   + +++
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125

Query: 99  LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           L  +++ H + V+HRD+K +N+LL    + K++
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 158

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD-VVTETCMDEGQIA 92
            E +  EI+  R  +HPNIV + +  L    L ++MEY  GG L + +       E +  
Sbjct: 60  DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEAR 119

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILL 122
              +++L  + + HS Q+ HRD+K +N LL
Sbjct: 120 FFFQQLLSGVSYCHSMQICHRDLKLENTLL 149

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 10/103 (9%)

Query: 38  INEILVMRE---NKHPNIVNYLD-----SYLVGEELWVVMEYLPG--GSLTDVVTETCMD 87
           I E+ V+R     +HPN+V   D           +L +V E++     +  D V E  + 
Sbjct: 59  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +KL
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 1/112 (0%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+LS    + ++        E  +M     P +V    ++     L++VMEY+PGG L +
Sbjct: 100 KLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN 158

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +++   + E        EV+ AL+ +HS   IHRD+K DN+LL   G +KL+
Sbjct: 159 LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA 210

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 35  ELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQIAA 93
             +  E+ +M+  +HP +VN   S+   E++++V++ L GG L   +       E  +  
Sbjct: 60  RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              E++ AL++L + ++IHRD+K DNILL   G V +
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHI 156

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEI-LVMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KK+++I  +++   M E        K P +      +   + L+ VMEY+ GG L   + 
Sbjct: 375 KKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ 434

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                 E        E+   L FL S  +I+RD+K DN++L  +G +K+
Sbjct: 435 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 483

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV--VTETC--MDEGQIAA 93
           I E+ +++E +H NI+           L ++ EY       D+    +    +    I +
Sbjct: 81  IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE----NDLKKYMDKNPDVSMRVIKS 136

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILL-----GLDGSVKL 130
              +++  + F HS + +HRD+K  N+LL          +K+
Sbjct: 137 FLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKI 178

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 72.7 bits (179), Expect = 3e-14
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEIL-VMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KK++I+  +++   M E         HP +      +   + L+ VME++ GG L   + 
Sbjct: 57  KKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ 116

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                DE +      E++ AL FLH   +I+RD+K DN+LL  +G  KL
Sbjct: 117 KSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKL 165

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEIL-VMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KKEL+    +I  V  E       + HP +V     +     L+ V+EY+ GG L   + 
Sbjct: 43  KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ 102

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  + E        E+  AL +LH   +I+RD+K DN+LL  +G +KL
Sbjct: 103 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 151

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
           + E  ++++  HPNIV  +      + +++VME + GG     +      +    +  + 
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +    +E+L S   IHRD+ + N L+     +K+S
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKIS 255

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 18/112 (16%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
           +K  II          E  VM    HP  V    ++   E+L+  + Y   G L   +  
Sbjct: 64  EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 123

Query: 83  ETCMDEGQIAAVCR----EVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               DE       R    E++ ALE+LH   +IHRD+K +NILL  D  +++
Sbjct: 124 IGSFDE----TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 171

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 72.1 bits (177), Expect = 5e-14
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 15/108 (13%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE--LWVVMEYL---------PGGSLTDVVTETCM 86
             EI ++RE KHPN+++    +L   +  +W++ +Y             +         +
Sbjct: 66  CREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD----GSVKL 130
             G + ++  ++L  + +LH+N V+HRD+K  NIL+  +    G VK+
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 71.4 bits (176), Expect = 5e-14
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 33  KKELII--NEILVMREN------KHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTE 83
           KK  +   + +    E        HP IV    ++    +L++++++L GG L T +  E
Sbjct: 61  KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE 120

Query: 84  TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
               E  +     E+  AL+ LHS  +I+RD+K +NILL  +G +KL
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 167

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)

Query: 29  AQQPKKELIINEILVMRENKH--PNIVNYLDSYLVGEELWVVMEY-LPGGSLTDVVTE-T 84
            + P    +  E++++++       ++  LD +   +   +++E   P   L D +TE  
Sbjct: 85  GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 144

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLS 131
            + E    +   +VL+A+   H+  V+HRDIK +NIL+ L+ G +KL 
Sbjct: 145 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI 192

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 71.5 bits (176), Expect = 6e-14
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEIL-VMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KK++++  +++   M E        +HP + +   ++   E L+ VMEYL GG L   + 
Sbjct: 51  KKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ 110

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +    D  +      E++  L+FLHS  +++RD+K DNILL  DG +K+
Sbjct: 111 SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKI 159

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 70.8 bits (174), Expect = 8e-14
 Identities = 30/113 (26%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K + +   L +      +  EI  ++  +HP+I+   D      ++ +V+EY  GG L D
Sbjct: 40  KFI-SRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFD 97

Query: 80  -VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +V +  M E +     ++++ A+E+ H ++++HRD+K +N+LL  + +VK++
Sbjct: 98  YIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIA 150

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 71.1 bits (175), Expect = 8e-14
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEI-LVMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KK+++I  +++   M E        K P +      +   + L+ VMEY+ GG L   + 
Sbjct: 54  KKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ 113

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                 E        E+   L FL S  +I+RD+K DN++L  +G +K+
Sbjct: 114 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKI 162

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 71.2 bits (175), Expect = 9e-14
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 33  KKELII--NEIL-VMRE-------NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVV 81
           KKEL+    +I  V  E       + HP +V     +     L+ V+EY+ GG L   + 
Sbjct: 86  KKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ 145

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +  + E        E+  AL +LH   +I+RD+K DN+LL  +G +KL
Sbjct: 146 RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKL 194

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 12/105 (11%), Positives = 29/105 (27%), Gaps = 11/105 (10%)

Query: 37  IINEILVMRENKHPNIVNYLDSY--LVGEELWVVMEYLPGGSLTDV--------VTETCM 86
           ++     +     P                  ++M       L  +        V     
Sbjct: 133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMP-AASVDLELLFSTLDFVYVFRGDE 191

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +  +  ++++    L S  ++H     DN+ +  DG + L 
Sbjct: 192 GILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLG 236

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 16/111 (14%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
            K+ ++         NE  +++    P +V    S+     L++VMEY+ GG + + +  
Sbjct: 75  DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134

Query: 83  ETCMDEGQ---IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                E      AA   +++   E+LHS  +I+RD+K +N+L+   G +++
Sbjct: 135 IGRFSEPHARFYAA---QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 13  DDRRFFS-KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +  + F+ K+L   + +           E  ++ E KHP IV+ + ++  G +L++++EY
Sbjct: 43  NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102

Query: 72  LPGGSL-TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           L GG L   +  E    E        E+  AL  LH   +I+RD+K +NI+L   G VKL
Sbjct: 103 LSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKL 162

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 40  EILVMRENKHPNIVNYLD--SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCRE 97
           EI ++R   H +I+ Y           L +VMEY+P GSL D +    +   Q+    ++
Sbjct: 83  EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ 142

Query: 98  VLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + + + +LH+   IHRD+ + N+LL  D  VK+ 
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG 176

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 38  INEILVMRENKHPNIVNYLD--------SYLVGEELWVVMEYLPG--GSLTDVVTETCMD 87
           + EI +++  KH N+VN ++               +++V ++       L   V      
Sbjct: 64  LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FT 122

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +I  V + +L  L ++H N+++HRD+K+ N+L+  DG +KL
Sbjct: 123 LSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL 165

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 71.4 bits (175), Expect = 1e-13
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 14/113 (12%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----T 78
            K+ +           E  ++ +     IV+   ++    +L +VM  + GG +      
Sbjct: 219 NKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN 278

Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                    E +      +++  LE LH   +I+RD+K +N+LL  DG+V++S
Sbjct: 279 VDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS 331

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 70.9 bits (174), Expect = 1e-13
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 17/113 (15%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT- 82
            K  ++          E  V+       I     ++     L++VMEY  GG   D++T 
Sbjct: 95  NKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGG---DLLTL 151

Query: 83  ----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                  +          E++ A++ +H    +HRDIK DNILL   G ++L+
Sbjct: 152 LSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLA 204

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 70.9 bits (173), Expect = 1e-13
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 48  KHPNIVNYLDSYLVGEELWVVMEYLP-----------GGSLTDVVTET-CMDEGQIAAVC 95
           K P     +   L   ++WV+  +             G  L    +    +       + 
Sbjct: 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLT 217

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +V++ L  LH   ++H  ++  +I+L   G V L+
Sbjct: 218 LQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT 253

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 70.4 bits (172), Expect = 1e-13
 Identities = 15/121 (12%), Positives = 38/121 (31%), Gaps = 9/121 (7%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-WVVMEYLPGGSLT 78
           ++L       Q       I    ++++ +   ++           L    +      +L 
Sbjct: 128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 187

Query: 79  DVVTE--------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                          +       +  +V++ L  LH   ++H  ++  +I+L   G V L
Sbjct: 188 TFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL 247

Query: 131 S 131
           +
Sbjct: 248 T 248

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 13  DDRRFFS-KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +  + F+ KIL+    L ++ +      E  V+       I     ++     L++VM+Y
Sbjct: 97  NADKVFAMKILNKWEML-KRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY 155

Query: 72  LPGGSLTDVVT-----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
             GG   D++T     E  + E        E++ A++ +H    +HRDIK DNIL+ ++G
Sbjct: 156 YVGG---DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG 212

Query: 127 SVKL 130
            ++L
Sbjct: 213 HIRL 216

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 69.5 bits (171), Expect = 2e-13
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 16/111 (14%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
           KKE+++         +E L++    HP I+    ++   ++++++M+Y+ GG L + +  
Sbjct: 40  KKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK 99

Query: 83  ETCMDEGQI---AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                       AA   EV  ALE+LHS  +I+RD+K +NILL  +G +K+
Sbjct: 100 SQRFPNPVAKFYAA---EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKI 147

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 19/113 (16%)

Query: 33  KKELIINE-----------ILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDV 80
           +K+ I+ +           +L+ +  KHP +V    S+   ++L+ V++Y+ GG L   +
Sbjct: 72  QKKAILKKKEEKHIMSERNVLL-KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL 130

Query: 81  VTETCMDEGQI---AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             E C  E +    AA   E+  AL +LHS  +++RD+K +NILL   G + L
Sbjct: 131 QRERCFLEPRARFYAA---EIASALGYLHSLNIVYRDLKPENILLDSQGHIVL 180

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 69.4 bits (170), Expect = 5e-13
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 33  KKELII---------NEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL---TDV 80
           +K+ I          NE  ++ +     +V+   +Y   + L +V+  + GG L      
Sbjct: 218 EKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277

Query: 81  VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + +    E +      E+   LE LH  ++++RD+K +NILL   G +++S
Sbjct: 278 MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRIS 328

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 69.0 bits (169), Expect = 5e-13
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 11/109 (10%)

Query: 33  KKELIIN---------EILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVT 82
           KKE+I+          E  V++ ++HP +     S+   + L  VMEY  GG L   +  
Sbjct: 182 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 241

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSDNILLGLDGSVKL 130
           E    E +      E++ AL++LHS + V++RD+K +N++L  DG +K+
Sbjct: 242 ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKI 290

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 4/96 (4%)

Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D +   +  +D  ++    
Sbjct: 92  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++ + +E+L + + IHRD+ + NIL+  +  VK+ 
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 187

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 4/96 (4%)

Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           EI +++  +H NIV Y    Y  G   L ++MEYLP GSL D +   +  +D  ++    
Sbjct: 61  EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++ + +E+L + + IHRD+ + NIL+  +  VK+ 
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 156

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 33  KKELIINE------------ILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TD 79
           KK  I+ +            +L     + P +V    ++    +L ++++Y+ GG L T 
Sbjct: 91  KKATIVQKAKTTEHTRTERQVLE-HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 149

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +       E ++     E++ ALE LH   +I+RDIK +NILL  +G V L
Sbjct: 150 LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL 200

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 65.7 bits (161), Expect = 4e-12
 Identities = 22/109 (20%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTET 84
                 + I++E  VM    +P++       L+G      + ++ + +P G L D V E 
Sbjct: 56  TSPKANKEILDEAYVMASVDNPHVCR-----LLGICLTSTVQLITQLMPFGCLLDYVREH 110

Query: 85  C--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +    +   C ++ + + +L   +++HRD+ + N+L+     VK++
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 159

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 65.4 bits (160), Expect = 5e-12
 Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 40  EILVMRENKHPNIVNYLD--SYLVGEELWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVC 95
           EI ++R   H NIV Y    +   G  + ++ME+LP GSL + +   +  ++  Q     
Sbjct: 73  EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++ + +++L S Q +HRD+ + N+L+  +  VK+ 
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 64.5 bits (158), Expect = 5e-12
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVC 95
             E   M +  HP +V +         +++V EY+  G L + +      ++  Q+  +C
Sbjct: 51  FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +V + + FL S+Q IHRD+ + N L+  D  VK+S
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVS 146

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 65.3 bits (158), Expect = 6e-12
 Identities = 38/257 (14%), Positives = 79/257 (30%), Gaps = 50/257 (19%)

Query: 30  QQPKKELIINEILVMRE---------NKHPNIVNYLDSYLV------------------- 61
            Q   E I+ EI++ +E         N+    +     + V                   
Sbjct: 63  HQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTK 122

Query: 62  -----------GEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN-Q 109
                       ++L++V+E+  GG   + +           ++  ++  +L    ++ +
Sbjct: 123 GSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLR 182

Query: 110 VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIES 169
             HRD+   N+LL      KL            I    + +   D+T   S      I  
Sbjct: 183 FEHRDLHWGNVLLKKTSLKKLHY--TLNGKSSTIPSCGLQVSIIDYT--LSRLERDGIVV 238

Query: 170 STGMEPKKELIINEILVM----RENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW 225
              +   ++L   +        R  K  N   + + +     LW  ++YL   ++ +  +
Sbjct: 239 FCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDKMLKQMTF 296

Query: 226 YTKPIEEPSNTTDEKTS 242
            TK           K  
Sbjct: 297 KTKCNTPAMKQIKRKIQ 313

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 66.1 bits (161), Expect = 7e-12
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 35  ELIINE--ILVM-RENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-TDVVTETCMDEGQ 90
            L +NE  +L +      P IV    ++   ++L  +++ + GG L   +       E  
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAD 293

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +     E++  LE +H+  V++RD+K  NILL   G V++S
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS 334

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 64.6 bits (158), Expect = 7e-12
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD---VVTETCMDEGQIAAV 94
           + E  VM+E KHPN+V  L         +++ E++  G+L D         +    +  +
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             ++  A+E+L     IHRD+ + N L+G +  VK++
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 64.5 bits (158), Expect = 8e-12
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 20  KILSNPITLA-QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP 73
           K L+  + +  ++ K++    EI VM + +H N+V      L+G     ++L +V  Y+P
Sbjct: 60  KKLAAMVDITTEELKQQFD-QEIKVMAKCQHENLVE-----LLGFSSDGDDLCLVYVYMP 113

Query: 74  GGSLTD----VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK 129
            GSL D    +     +       + +     + FLH N  IHRDIKS NILL    + K
Sbjct: 114 NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 173

Query: 130 LS 131
           +S
Sbjct: 174 IS 175

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 64.7 bits (158), Expect = 8e-12
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 40  EILVMRENKHPNIVNYLD-SYLVGEE-LWVVMEYLPGGSLTDVVTETC--MDEGQIAAVC 95
           EI +++      IV Y   SY  G + L +VMEYLP G L D +      +D  ++    
Sbjct: 74  EIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            ++ + +E+L S + +HRD+ + NIL+  +  VK++
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 169

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV--- 94
           I E  VM +  HP +V      L    + +V E++  G L+D +       G  AA    
Sbjct: 51  IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT---QRGLFAAETLL 107

Query: 95  --CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             C +V + + +L    VIHRD+ + N L+G +  +K+S
Sbjct: 108 GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS 146

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           I E  VM    H  +V           ++++ EY+  G L + +          Q+  +C
Sbjct: 67  IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++V +A+E+L S Q +HRD+ + N L+   G VK+S
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 162

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 13/107 (12%)

Query: 38  INEILVMRENKHPNIVNYL------DSYLVGEELWVVMEYLPGGSLTD-------VVTET 84
           + E   M+E  HP++   +       +        V++ ++  G L              
Sbjct: 73  LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +    +     ++   +E+L S   IHRD+ + N +L  D +V ++
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTET 84
                +E  + E L MR+  HP+IV      L+G      +W++ME    G L   +   
Sbjct: 55  TSDSVREKFLQEALTMRQFDHPHIVK-----LIGVITENPVWIIMELCTLGELRSFLQVR 109

Query: 85  C--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +D   +     ++  AL +L S + +HRDI + N+L+  +  VKL 
Sbjct: 110 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 158

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 14/103 (13%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTD---VVTETCMDE 88
           + E  VM + +H N+V      L+G        L++V EY+  GSL D       + +  
Sbjct: 62  LAEASVMTQLRHSNLVQ-----LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG 116

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S
Sbjct: 117 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 159

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------TDVVTETCM 86
           +NE  VM+E    ++V  L     G+   V+ME +  G L            +       
Sbjct: 76  LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              ++  +  E+   + +L++N+ +HRD+ + N ++  D +VK+ 
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 180

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 14/114 (12%)

Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDV 80
            +      +  + E  VM + +H N+V      L+G        L++V EY+  GSL D 
Sbjct: 223 CIKNDATAQAFLAEASVMTQLRHSNLVQ-----LLGVIVEEKGGLYIVTEYMAKGSLVDY 277

Query: 81  VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +     + +    +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S
Sbjct: 278 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 331

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEG 89
           + E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E     +   
Sbjct: 259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            +  +  ++  A+E+L     IHR++ + N L+G +  VK++
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA 360

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVV--T 82
                +E  + E L MR+  HP+IV      L+G      +W++ME    G L   +   
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVK-----LIGVITENPVWIIMELCTLGELRSFLQVR 484

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +  +D   +     ++  AL +L S + +HRDI + N+L+  +  VKL 
Sbjct: 485 KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 533

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 22/109 (20%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTET 84
                 + I++E  VM    +P++       L+G      + ++ + +P G L D V E 
Sbjct: 56  TSPKANKEILDEAYVMASVDNPHVCR-----LLGICLTSTVQLITQLMPFGCLLDYVREH 110

Query: 85  C--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +    +   C ++ + + +L   +++HRD+ + N+L+     VK++
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 159

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTE---TCMDEGQ 90
           + E  +M++ +H  +V      L      E ++++ EY+  GSL D +       +   +
Sbjct: 56  LAEANLMKQLQHQRLVR-----LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 110

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +  +  ++ + + F+     IHRD+++ NIL+    S K++
Sbjct: 111 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 18/121 (14%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGG 75
           K L  P  L+Q    +  I E+  M    H N++      L G      + +V E  P G
Sbjct: 52  KCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLIR-----LYGVVLTPPMKMVTELAPLG 105

Query: 76  SLTDVVTETCMDEGQIAAV-----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           SL D + +    +G            +V + + +L S + IHRD+ + N+LL     VK+
Sbjct: 106 SLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 162

Query: 131 S 131
            
Sbjct: 163 G 163

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 62.9 bits (153), Expect = 6e-11
 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEG 89
             E  + E  VM++ +H  +V  L + +  E +++V EY+  GSL D +       +   
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQ-LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           Q+  +  ++   + ++     +HRD+++ NIL+G +   K++
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 18/112 (16%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------------TD 79
           ++E+ +M+   KH NI+N L +      L+V++EY   G+L                  +
Sbjct: 134 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 193

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            V E  M    + +   ++ + +E+L S + IHRD+ + N+L+  +  +K++
Sbjct: 194 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 245

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.4 bits (150), Expect = 7e-11
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 14/118 (11%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGG 75
           K            +K   ++E ++M+   HP+IV      L+G    E  W++ME  P G
Sbjct: 46  KTC-KKDCTLDNKEK--FMSEAVIMKNLDHPHIVK-----LIGIIEEEPTWIIMELYPYG 97

Query: 76  SLTDVVTETC--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            L   +      +    +     ++ +A+ +L S   +HRDI   NIL+     VKL 
Sbjct: 98  ELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLG 155

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 61.9 bits (151), Expect = 7e-11
 Identities = 20/106 (18%), Positives = 48/106 (45%), Gaps = 12/106 (11%)

Query: 38  INEILVMRENKHPNIVNYL-----DSYLVGEELWVVMEYLPGGSLTDVVTETCMDEG--- 89
           ++E   M++  HPN++  L      S     +  V++ ++  G L   +  + ++ G   
Sbjct: 84  LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKH 143

Query: 90  ----QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                +     ++   +E+L +   +HRD+ + N +L  D +V ++
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA 189

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 25/119 (21%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-------------------- 77
           ++E  V+++  HP+++    +      L +++EY   GSL                    
Sbjct: 74  LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133

Query: 78  -----TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                 D   E  +  G + +   ++ Q +++L   +++HRD+ + NIL+     +K+S
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTETC--MD 87
            + + + +L +    H +IV      L+G      L +V +YLP GSL D V +    + 
Sbjct: 59  FQAVTDHMLAIGSLDHAHIVR-----LLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALG 113

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              +     ++ + + +L  + ++HR++ + N+LL     V+++
Sbjct: 114 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA 157

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 18/112 (16%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------------TD 79
           I+E+ +M+   KH NI+N L +      L+V++EY   G+L                   
Sbjct: 122 ISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              E  +    + +   +V + +E+L S + IHRD+ + N+L+  D  +K++
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA 233

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 18/112 (16%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------------TD 79
           ++E+ +M+   KH NI+N L +      L+V++EY   G+L                  +
Sbjct: 88  VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            V E  M    + +   ++ + +E+L S + IHRD+ + N+L+  +  +K++
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA 199

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 2/105 (1%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCM 86
             + ++   + E  +M +  H NI+         + + ++ EY+  G+L   +   +   
Sbjct: 85  YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF 144

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
              Q+  + R +   +++L +   +HRD+ + NIL+  +   K+S
Sbjct: 145 SVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS 189

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 62.2 bits (151), Expect = 9e-11
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTE---TC 85
             E  + E  VM++ +H  +V      L      E +++V EY+  GSL D +       
Sbjct: 305 SPEAFLQEAQVMKKLRHEKLVQ-----LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY 359

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +   Q+  +  ++   + ++     +HRD+++ NIL+G +   K++
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 405

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 13/103 (12%)

Query: 37  IINEILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLPGGSLTD----VVTETCMD 87
           I+ EI ++    H ++V  LD          +EL+VV+E       +D      T   + 
Sbjct: 99  ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD----SDFKKLFRTPVYLT 154

Query: 88  EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           E  I  +   +L  ++++HS  ++HRD+K  N L+  D SVK+
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV 197

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%)

Query: 39  NEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPGGSLTD-----VVTETCMDE 88
            EI  +   +HP++V+     L+G      E+ ++ +Y+  G+L        +    M  
Sbjct: 84  TEIETLSFCRHPHLVS-----LIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW 138

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            Q   +C    + L +LH+  +IHRD+KS NILL  +   K++
Sbjct: 139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKIT 181

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDE 88
             + ++   ++E  +M +  HPNI+        G    +V EY+  GSL   +      +
Sbjct: 89  YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT---HD 145

Query: 89  GQIAAV-----CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           GQ   +      R V   + +L     +HRD+ + N+L+  +   K+S
Sbjct: 146 GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS 193

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 20/114 (17%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL------------------- 77
           ++E+ V+     H NIVN L +  +G    V+ EY   G L                   
Sbjct: 74  MSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133

Query: 78  TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                E  +D   + +   +V + + FL S   IHRD+ + NILL      K+ 
Sbjct: 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC 187

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 16/110 (14%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD---------------VV 81
           ++E+ +M    +H NIVN L +   G  + V+ EY   G L +                +
Sbjct: 97  MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156

Query: 82  TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +      +     +V Q + FL S   IHRD+ + N+LL      K+ 
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 61.8 bits (149), Expect = 2e-10
 Identities = 71/455 (15%), Positives = 123/455 (27%), Gaps = 141/455 (30%)

Query: 5   VTIDRFSSD-DRRFFSKILSNPIT------LAQQPKKELIINEILVMRENKHPNIVNYLD 57
           V  D F  + D +    +  + ++      +            +     +K   +V    
Sbjct: 24  VFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV---- 79

Query: 58  SYLVGEEL-----WVVMEY---LPGGSLTDVVTETCMD----EGQIAA---VCREVL--- 99
              V E L     +++          S+   +     D    + Q+ A   V R      
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139

Query: 100 --QALEFLHSNQ--VIH---------------RDIKSDNILLGLDGSV---KLSKWNR-- 135
             QAL  L   +  +I                   K   +   +D  +    L   N   
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK---VQCKMDFKIFWLNLKNCNSPE 196

Query: 136 ---FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKH 192
               +  KL  +I        +WT+ +  +    +   +     + L       ++   +
Sbjct: 197 TVLEMLQKLLYQIDP------NWTSRSDHSSNIKLRIHSIQAELRRL-------LKSKPY 243

Query: 193 PNIVNYLDSYLVGEELWN--IVNYLD---SYLVGEELWYTKPIEEPSNTTDEKTSTSSAS 247
            N        LV   + N    N  +     L+               TT  K  T   S
Sbjct: 244 EN------CLLVLLNVQNAKAWNAFNLSCKILL---------------TTRFKQVTDFLS 282

Query: 248 PLSTPPLSLIQPPPPSTPPRST------LNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL 301
             +T  +SL       TP          L+     LP  V+       T P      SI+
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL------TTNP---RRLSII 333

Query: 302 -EFL--GPHKWSFQPHFLIPYL--FILSCRQALYLIATNKKPEIKEK-EKLSQIFQD--- 352
            E +  G   W    H     L   I S    L      +  E ++  ++LS +F     
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVL------EPAEYRKMFDRLS-VFPPSAH 386

Query: 353 ------------FLDQCLEEEVETRASASLLLKHP 375
                        +   +   V      SL+ K P
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 19/106 (17%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEE------LWVVMEYLPGGSLTDV--------VTETC 85
           E+ +MR+  H NIV     +    E      L +V++Y+P      V          +  
Sbjct: 97  ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQT 152

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKL 130
           +    +     ++ ++L ++HS  + HRDIK  N+LL  D   +KL
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 198

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 30  QQPKKELIINEILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTETC 85
               K+ ++ E  VM++  +P IV      ++G    E   +VME    G L   + +  
Sbjct: 58  DPALKDELLAEANVMQQLDNPYIVR-----MIGICEAESWMLVMEMAELGPLNKYLQQNR 112

Query: 86  -MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            + +  I  +  +V   +++L  +  +HRD+ + N+LL      K+S
Sbjct: 113 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS 159

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEG 89
             E  + E  VM+  +H  +V  L + +  E ++++ E++  GSL D +     +     
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 284

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++     ++ + + F+     IHRD+++ NIL+      K++
Sbjct: 285 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA 326

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 17/117 (14%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL------------- 77
             +++    E  ++   +H +IV +      G  L +V EY+  G L             
Sbjct: 85  SARQDFQ-REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143

Query: 78  ---TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               + V    +  GQ+ AV  +V   + +L     +HRD+ + N L+G    VK+ 
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG 200

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 60.7 bits (147), Expect = 3e-10
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQI 91
            E ++ E  +M +  +P IV  L      E L +VME   GG L   +      +    +
Sbjct: 380 TEEMMREAQIMHQLDNPYIVR-LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV 438

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           A +  +V   +++L     +HR++ + N+LL      K+S
Sbjct: 439 AELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS 478

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE-LWVVMEYLPGGSLTDVV--TETCMDEGQIAAV 94
           + E ++M++  HPN+++ L   L  E    VV+ Y+  G L + +           +   
Sbjct: 74  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 133

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +V + +++L S + +HRD+ + N +L    +VK++
Sbjct: 134 GLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 170

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 19/106 (17%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEE------LWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           E+ +MR  KHPN+V+    +    +      L +V+EY+P      V   +       Q 
Sbjct: 82  ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQT 137

Query: 92  --AAVCR----EVLQALEFLHSNQVIHRDIKSDNILL-GLDGSVKL 130
               + +    ++L++L ++HS  + HRDIK  N+LL    G +KL
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKL 183

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 59.1 bits (144), Expect = 5e-10
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 17/111 (15%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-----------------TDV 80
            +E ++    +HPN+V  L      + L ++  Y   G L                  D 
Sbjct: 60  RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119

Query: 81  VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             ++ ++      +  ++   +E+L S+ V+H+D+ + N+L+    +VK+S
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 18/112 (16%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD----------------- 79
             E+ V+ +   HPNI+N L +      L++ +EY P G+L D                 
Sbjct: 73  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132

Query: 80  VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             T + +   Q+     +V + +++L   Q IHRD+ + NIL+G +   K++
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 59.3 bits (144), Expect = 6e-10
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
           + E  +M +  HPNI+         + + +V EY+  GSL   +   +      Q+  + 
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           R +   +++L     +HRD+ + NIL+  +   K+S
Sbjct: 154 RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 59.3 bits (144), Expect = 6e-10
 Identities = 23/97 (23%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 40  EILVMRENKHPNIVNYLD------SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+ +++  KH N++  LD      S     ++++V   + G  L ++V    + +  +  
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  ++L+ L+++HS  +IHRD+K  N+ +  D  +K+
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE-LWVVMEYLPGGSLTDVV--TETCMDEGQIAAV 94
           + E L+MR   HPN++  +   L  E    V++ Y+  G L   +   +       + + 
Sbjct: 70  LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +V + +E+L   + +HRD+ + N +L    +VK++
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVA 166

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 58.9 bits (143), Expect = 7e-10
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL--------TDVVTETCMDEG 89
           + E L++ +  H NIV  +   L     ++++E + GG L              + +   
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLS 131
            +  V R++    ++L  N  IHRDI + N LL   G     K+ 
Sbjct: 182 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 226

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 58.4 bits (142), Expect = 7e-10
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 18/118 (15%)

Query: 31  QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL------------- 77
             +K+    E  ++   +H +IV +      G+ L +V EY+  G L             
Sbjct: 59  AARKDFQ-REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117

Query: 78  ----TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                    +  +   Q+  +  ++   + +L S   +HRD+ + N L+G +  VK+ 
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG 175

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 20  KILSNPITLAQQPKKELIINEILVMR--ENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
           K++ N     +Q  +E+ I E L  +  +N   N+++ L+++     + +  E L   +L
Sbjct: 128 KMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM-NVIHMLENFTFRNHICMTFELL-SMNL 185

Query: 78  TDVVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            +++ +          +      +LQ L+ LH N++IH D+K +NILL
Sbjct: 186 YELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 58.5 bits (142), Expect = 9e-10
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 11/105 (10%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL--------TDVVTETCMDEG 89
           + E L++ +  H NIV  +   L     +++ME + GG L              + +   
Sbjct: 81  LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLS 131
            +  V R++    ++L  N  IHRDI + N LL   G     K+ 
Sbjct: 141 DLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 58.1 bits (141), Expect = 9e-10
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQIAAVC 95
                +M +  H ++V      + G+E  +V E++  GSL   +   + C++      V 
Sbjct: 60  FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119

Query: 96  REVLQALEFLHSNQVIHRDIKSDNILL--------GLDGSVKLS 131
           +++  A+ FL  N +IH ++ + NILL        G    +KLS
Sbjct: 120 KQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 24/99 (24%), Positives = 57/99 (57%), Gaps = 12/99 (12%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           E+++M+   H NI++ L+ +         +++++VME +      ++  V +  +D  ++
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQMELDHERM 166

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           + +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 19/113 (16%)

Query: 38  INEILVMRE-NKHPNIVNYLD-SYLVGEELWVVMEYLPGGSL-----------------T 78
           ++E+ ++     H N+VN L      G  L V++E+   G+L                  
Sbjct: 78  MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137

Query: 79  DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + + +  +    +     +V + +EFL S + IHRD+ + NILL     VK+ 
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 40  EILVMRENKHPNIVNYLD------SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+ +++  +H N++  LD      +     + ++VM ++ G  L  ++    + E +I  
Sbjct: 74  ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQF 132

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  ++L+ L ++H+  +IHRD+K  N+ +  D  +K+
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI 169

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEE-LWVVMEYLPGGSLTDVV--TETCMDEGQIAAV 94
           + E ++M++  HPN+++ L   L  E    VV+ Y+  G L + +           +   
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             +V + ++FL S + +HRD+ + N +L    +VK++
Sbjct: 198 GLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 234

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 23/105 (21%)

Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLP---------GGSLTDVVTETC 85
           EI ++   K   I+   D       L  +EL++V+E               LT+   +T 
Sbjct: 75  EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTI 134

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +    +       L    F+H + +IHRD+K  N LL  D SVK+
Sbjct: 135 L--YNL-------LLGENFIHESGIIHRDLKPANCLLNQDCSVKV 170

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 25/119 (21%)

Query: 38  INEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSL------------------- 77
           ++E+ +M +   H NIVN L +  +   ++++ EY   G L                   
Sbjct: 96  MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155

Query: 78  -----TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                 +      +    +     +V + +EFL     +HRD+ + N+L+     VK+ 
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC 214

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 26/97 (26%), Positives = 55/97 (56%), Gaps = 8/97 (8%)

Query: 40  EILVMRENKHPNIVNYLD------SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAA 93
           E+++M+   H NI+  L+      S    +++++VME +   +L  V+      E +++ 
Sbjct: 74  ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHE-RMSY 131

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           +  ++L  ++ LHS  +IHRD+K  NI++  D ++K+
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 20/119 (16%)

Query: 68  VMEYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL 124
           V+  L G SL   +  +    + E  +  V   +L ALEFLH N+ +H ++ ++NI +  
Sbjct: 136 VLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDP 194

Query: 125 DGSVK-------LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTV-YTAIESSTGMEP 175
           +   +        +   R+  +  ++       Y     +   G + + +++   G  P
Sbjct: 195 EDQSQVTLAGYGFAF--RYCPSGKHVA------YVEGSRSPHEGDLEFISMDLHKGCGP 245

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG----EELWVVMEYLPGGSLTDVVTETC--MDEGQIAA 93
           E  +M +  +P IV      L+G    E L +VME   GG L   +      +    +A 
Sbjct: 60  EAQIMHQLDNPYIVR-----LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 114

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           +  +V   +++L     +HRD+ + N+LL      K+S
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS 152

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 12/99 (12%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPGGSLTDV--VTETCMDEGQI 91
           E+L+++  +H N++  LD +          + ++VM ++     TD+  +      E +I
Sbjct: 73  ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGLKFSEEKI 128

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             +  ++L+ L+++HS  V+HRD+K  N+ +  D  +K+
Sbjct: 129 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI 167

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 25/119 (21%)

Query: 38  INEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL-------------------- 77
             E  +M E  +PNIV  L    VG+ + ++ EY+  G L                    
Sbjct: 98  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157

Query: 78  -----TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
                        +   +   + R+V   + +L   + +HRD+ + N L+G +  VK++
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA 216

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 12/99 (12%)

Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLPGGSLTD---VVTETCMDEGQI 91
           EI +++  KH NI+   +     S+    E++++ E +     TD   V++   + +  I
Sbjct: 59  EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHI 114

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                + L+A++ LH + VIHRD+K  N+L+  +  +K+
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKV 153

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 55.8 bits (135), Expect = 8e-09
 Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 40  EILVMRENKHPNIVNYLD-----SYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAV 94
           EI ++   +H NI+   D     +    +++++V + +    L  ++    +    I   
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYF 133

Query: 95  CREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             ++L+ L+++HS  V+HRD+K  N+LL     +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 8/136 (5%)

Query: 20  KILSNPITLAQQPKKELIINEILVMR--ENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
           KI+ N     +  + E+ + + +  +  ENK    V   D +     + +  E L G + 
Sbjct: 51  KIIRNVGKYREAARLEINVLKKIKEKDKENKF-LCVLMSDWFNFHGHMCIAFELL-GKNT 108

Query: 78  TDVVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            + + E          +  +  ++  AL FLH NQ+ H D+K +NIL        L   +
Sbjct: 109 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 168

Query: 135 RFIATKLYIEIS-KVI 149
           +    K     S +V 
Sbjct: 169 KSCEEKSVKNTSIRVA 184

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 12/114 (10%)

Query: 68  VMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
           VME L G  L  +  +     +  +  +   +L  LE++H N+ +H DIK+ N+LLG   
Sbjct: 130 VMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN 188

Query: 127 SVKLSKWNRFIA----TKLYIEISKVIIYCWDWTAVASGTV-YTAIESSTGMEP 175
             ++     ++A    +  Y        Y  +     +GT+ +T++++  G+  
Sbjct: 189 PDQV-----YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVAL 237

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 8/98 (8%)

Query: 40  EILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPGGSLTDVV--TETCMDEGQIA 92
           EI ++    HPNI+   D ++        +L++V E +    L  V+      +    I 
Sbjct: 79  EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
                +L  L  LH   V+HRD+   NILL  +  + +
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 8/136 (5%)

Query: 20  KILSNPITLAQQPKKELIINEILVMR--ENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
           KI+ N     +  + E+ + E L      +     V  L+ +     + +V E L G S 
Sbjct: 46  KIVKNVDRYCEAARSEIQVLEHLNTTDPNSTF-RCVQMLEWFEHHGHICIVFELL-GLST 103

Query: 78  TDVVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            D + E          I  +  ++ +++ FLHSN++ H D+K +NIL       +     
Sbjct: 104 YDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK 163

Query: 135 RFIATKLYIEIS-KVI 149
                +  I    KV+
Sbjct: 164 IKRDERTLINPDIKVV 179

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K++ N     +  K E  I + +   +  + NIV Y   ++  + + ++ E L G SL +
Sbjct: 66  KVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYE 124

Query: 80  VVTETC---MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           ++T           I   C E+L+AL +L    + H D+K +NILL
Sbjct: 125 IITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 10/97 (10%)

Query: 40  EILVMRE-NKHPNIVNYLDSYLV--GEELWVVMEYLPGGSLTD---VVTETCMDEGQIAA 93
           EI+++ E + H NIVN L+        ++++V +Y+     TD   V+    ++      
Sbjct: 58  EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME----TDLHAVIRANILEPVHKQY 113

Query: 94  VCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           V  ++++ +++LHS  ++HRD+K  NILL  +  VK+
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKV 150

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 28/129 (21%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE-------LWVVMEYL 72
           K++ +P        +   +  +  +    HPNIV     +    E       L VVMEY+
Sbjct: 55  KVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108

Query: 73  PGGSLTDV--VTETCMDEGQI--AAVCR----EVLQALEFLH--SNQVIHRDIKSDNILL 122
           P      +                 + +    ++++++  LH  S  V HRDIK  N+L+
Sbjct: 109 P----DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164

Query: 123 -GLDGSVKL 130
              DG++KL
Sbjct: 165 NEADGTLKL 173

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.8 bits (129), Expect = 5e-08
 Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPN---IVNYLDSYLV----GEELWVVMEYL 72
           K++ +     +    E+ + + +   +   PN   +V  LD + +    G  + +V E L
Sbjct: 68  KVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL 127

Query: 73  PGGSLTDVVT---ETCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSV 128
            G  L   +       +    +  + ++VLQ L++LH+  ++IH DIK +NILL ++   
Sbjct: 128 -GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQY 186

Query: 129 KLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELI 180
                      +                A A   +   +E     + K ++ 
Sbjct: 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIA 238

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.8 bits (127), Expect = 8e-08
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 27/122 (22%)

Query: 68  VMEYLPGGSLTDVVTE---------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSD 118
           +M+   G  L  +                   ++     +L  LE++H ++ +H DIK+ 
Sbjct: 130 IMDRF-GSDLQKIYEANAKRFSRKTVLQ----LS---LRILDILEYIHEHEYVHGDIKAS 181

Query: 119 NILLGLDGSVKLSKWNRFIA----TKLYIEISKVIIYCWDWTAVASGTV-YTAIESSTGM 173
           N+LL      ++     ++        Y        Y  D      GT+ +T+I++  G+
Sbjct: 182 NLLLNYKNPDQV-----YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV 236

Query: 174 EP 175
            P
Sbjct: 237 AP 238

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCR---EVLQALEFLHSNQVIHRDIKSDNILLGL 124
           V++ L G SL D++ + C  +  +  V     ++L  ++ +H   +++RDIK DN L+G 
Sbjct: 84  VIDLL-GPSLEDLL-DLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR 141

Query: 125 DGSVKLSK 132
             S   + 
Sbjct: 142 PNSKNANM 149

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 20  KILSNPITLAQQPKKELIINEILVMR--ENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL 77
           KI+ N      Q + E+ + E++     E K+  IV+    ++    L +V E L   +L
Sbjct: 85  KIIKNKKAFLNQAQIEVRLLELMNKHDTEMKY-YIVHLKRHFMFRNHLCLVFEML-SYNL 142

Query: 78  TDVVTETC---MDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNILL 122
            D++  T    +         +++  AL FL +    +IH D+K +NILL
Sbjct: 143 YDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCR---EVLQALEFLHSNQVIHRDIKSDNILLGL 124
           V+E L G SL D+  + C     +  V     +++  +E++HS  +I+RD+K +N L+G 
Sbjct: 83  VLELL-GPSLEDLF-DLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGR 140

Query: 125 DGSVKLSK 132
            G+     
Sbjct: 141 PGNKTQQV 148

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCR---EVLQALEFLHSNQVIHRDIKSDNILLGL 124
           VME L G SL D+    C  +  +  V     +++  +E++HS   IHRD+K DN L+GL
Sbjct: 83  VMELL-GPSLEDLF-NFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL 140

Query: 125 DGSVKLSKWNRFIATKLYI 143
                L     F   K Y 
Sbjct: 141 GKKGNLVYIIDFGLAKKYR 159

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 21/100 (21%)

Query: 40  EILVMRENKHPNIVNYLD--------------SYLVGEELWVVMEYLPGGSLTD---VVT 82
           EI ++R   H NIV   +              S      +++V EY+     TD   V+ 
Sbjct: 58  EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME----TDLANVLE 113

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           +  + E        ++L+ L+++HS  V+HRD+K  N+ +
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI 153

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 49.6 bits (118), Expect = 9e-07
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCR---EVLQALEFLHSNQVIHRDIKSDNILLGL 124
           VM+ L G SL D+    C  +  +  V     +++  +EF+HS   +HRDIK DN L+GL
Sbjct: 81  VMDLL-GPSLEDLF-NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 138

Query: 125 DGSVKLSKWNRFIATKLYI 143
                      F   K Y 
Sbjct: 139 GRRANQVYIIDFGLAKKYR 157

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 25/103 (24%)

Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VTETCMD--- 87
           KK+ I  EI ++      PNI+   D         +V       S T   V E   +   
Sbjct: 73  KKKKIKREIKILENLRGGPNIITLAD---------IVK---DPVSRTPALVFEHVNNTDF 120

Query: 88  --------EGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
                   +  I     E+L+AL++ HS  ++HRD+K  N+++
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDE 88
            Q  + +    E+ ++    H N++      +   E  +V  Y+  GS+   + E    +
Sbjct: 67  TQGGELQFQ-TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125

Query: 89  GQI-----AAVCREVLQALEFLH--SN-QVIHRDIKSDNILLGLDGSVKLS 131
             +       +     + L +LH   + ++IHRD+K+ NILL  +    + 
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHP------NIVNYLDSY----LVGEELWVVM 69
           KI+       +  + E+ + + +   +N         +I+  LD +      G  + +V 
Sbjct: 50  KIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF 109

Query: 70  EYLPGGSLTDVVTETC---MDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILL 122
           E L G +L  ++ +     +    +  + +++L  L+++H    +IH DIK +N+L+
Sbjct: 110 EVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 337 KPEIKEKEKLS----QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 388
           +  + EK K S    +   DFL   L+ +   RA A  L+ HP+LK    +  +  
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 51/138 (36%)

Query: 40  EILVMRENKHPNIVNYLDSYLVGEE----------------------------------- 64
           E+ +M+   H NI+  +D +    +                                   
Sbjct: 50  ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQ 109

Query: 65  ---LWVVMEYLPGGSLTDV--VTETCMDEGQI--AAVCR----EVLQALEFLHSNQVIHR 113
              L V+MEY+P      +  V ++ +  G+     +      ++ +A+ F+HS  + HR
Sbjct: 110 NKYLNVIMEYVP----DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR 165

Query: 114 DIKSDNILL-GLDGSVKL 130
           DIK  N+L+   D ++KL
Sbjct: 166 DIKPQNLLVNSKDNTLKL 183

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	400
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.98
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.98
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.83
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.75
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.6
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.37
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.91
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.62
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.51
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.9
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.87
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.73
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.67
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.13
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.05
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.03
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.01
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	96.99
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	96.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	96.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	96.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	96.91
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.84
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	96.82
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.81
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.78
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	96.66
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.6
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.45
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	96.41
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	95.89
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	95.84
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	95.7
4aoj_A	329	High affinity nerve growth factor receptor; transf	95.68
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	95.63
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	95.62
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.23
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.18
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	95.14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	94.76
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	94.63
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	94.61
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	94.58
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	94.58
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	94.54
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	94.47
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	94.45
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	94.45
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	94.45
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	94.44
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	94.42
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	94.39
3niz_A	311	Rhodanese family protein; structural genomics, str	94.37
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	94.29
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.29
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	94.27
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	94.27
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	94.21
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	94.14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	94.13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	94.11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	94.08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	94.07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	94.02
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	93.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	93.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	93.87
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.84
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	93.83
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	93.82
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	93.82
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	93.79
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	93.77
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	93.74
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	93.72
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	93.72
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	93.71
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	93.68
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	93.67
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	93.66
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	93.65
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	93.59
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	93.58
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	93.57
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	93.56
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	93.51
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	93.5
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	93.49
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.41
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	93.33
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	93.29
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	93.26
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	93.24
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	93.24
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	93.21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	93.21
3soc_A	322	Activin receptor type-2A; structural genomics cons	93.16
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	93.14
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	93.13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	92.92
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	92.92
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	92.88
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	92.87
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	92.85
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	92.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	92.78
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	92.76
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	92.74
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	92.73
3ork_A	311	Serine/threonine protein kinase; structural genomi	92.69
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	92.67
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	92.65
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	92.63
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	92.62
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	92.6
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	92.58
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	92.55
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	92.53
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	92.43
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	92.42
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	92.41
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	92.4
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	92.37
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	92.36
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	92.33
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	92.32
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	92.3
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	92.29
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	92.26
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	92.2
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	92.19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	92.09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	92.08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	92.02
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	91.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	91.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	91.93
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	91.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	91.88
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	91.86
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	91.8
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	91.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	91.75
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	91.73
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	91.72
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	91.68
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	91.64
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	91.61
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	91.59
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	91.48
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	91.47
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	91.44
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	91.41
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	91.35
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	91.32
3q4u_A	301	Activin receptor type-1; structural genomics conso	91.28
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	91.27
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	91.27
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	91.25
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	91.2
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	91.15
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	91.14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	91.1
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	91.07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	91.07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	91.04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	90.98
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	90.98
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	90.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	90.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	90.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	90.91
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	90.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	90.88
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	90.85
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	90.85
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	90.83
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	90.82
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	90.82
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	90.78
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	90.77
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	90.68
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	90.66
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	90.61
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	90.56
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	90.32
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	90.27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	90.26
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	90.24
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	90.24
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	90.24
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	90.15
3fme_A	290	Dual specificity mitogen-activated protein kinase;	90.15
3bhy_A	283	Death-associated protein kinase 3; death associate	90.09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	90.05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	90.04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	89.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	89.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	89.91
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	89.89
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	89.84
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	89.81
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	89.77
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	89.7
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	89.66
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	89.63
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	89.61
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	89.52
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	89.47
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	89.31
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	89.25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	89.24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	89.24
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	89.21
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	89.14
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	89.08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	89.05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	89.03
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	88.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	88.9
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	88.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	88.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	88.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	88.71
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	88.53
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	88.49
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	88.27
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	88.19
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	88.02
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	87.98
2a19_B	284	Interferon-induced, double-stranded RNA-activated	87.75
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	87.65
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	87.62
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	87.47
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	87.46
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	87.45
3aln_A	327	Dual specificity mitogen-activated protein kinase;	87.44
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	87.26
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	87.24
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	87.19
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	87.12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	87.08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	86.98
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	86.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	86.81
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	86.8
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	86.76
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	86.74
2dyl_A	318	Dual specificity mitogen-activated protein kinase	86.59
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	86.59

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.5e-56  Score=429.22  Aligned_cols=263  Identities=40%  Similarity=0.592  Sum_probs=238.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|++........+.+.+|+.+|++++|+|||+++++|.+++.+|+|||||+||+|.++
T Consensus        82 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~  161 (346)
T 4fih_A           82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  161 (346)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHH
T ss_pred             eecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            69999999999999999999999998766655667789999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +.++.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.+||+|||  ++..+...                
T Consensus       162 l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG--la~~~~~~----------------  223 (346)
T 4fih_A          162 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG--FCAQVSKE----------------  223 (346)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECCSS----------------
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCc--CceecCCC----------------
Confidence            998899999999999999999999999999999999999999999999999999  44311110                


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       224 --------------------------------------------------------------------------------  223 (346)
T 4fih_A          224 --------------------------------------------------------------------------------  223 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                             .....+.+||+.|||||++.+..|+...|+||+||++|||++|..         ||.
T Consensus       224 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~---------PF~  271 (346)
T 4fih_A          224 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP---------PYF  271 (346)
T ss_dssp             -----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC---------TTT
T ss_pred             -----------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC---------CCC
Confidence                                   011345689999999999999999999999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhH
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAK  394 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~  394 (400)
                      . .+..+.+..|..+.++.++.+..+|+.+.|||.+||++||++|||++|+|+||||++..++++++||++..+
T Consensus       272 ~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p~~l~pl~~~~r  344 (346)
T 4fih_A          272 N-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR  344 (346)
T ss_dssp             T-SCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGGGSTTTC
T ss_pred             C-cCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCCcccCccccccC
Confidence            7 788888888888887788778889999999999999999999999999999999999999999999998653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.5e-55  Score=432.40  Aligned_cols=263  Identities=40%  Similarity=0.592  Sum_probs=239.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|++........+.+.+|+.+|++++|+|||+++++|.+++.+|+|||||+||+|.++
T Consensus       159 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~  238 (423)
T 4fie_A          159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  238 (423)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             eccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            69999999999999999999999999877666677899999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +..+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||  ++..+...                
T Consensus       239 i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFG--la~~~~~~----------------  300 (423)
T 4fie_A          239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG--FCAQVSKE----------------  300 (423)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCT--TCEECCSS----------------
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCc--cceECCCC----------------
Confidence            998899999999999999999999999999999999999999999999999999  44311110                


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       301 --------------------------------------------------------------------------------  300 (423)
T 4fie_A          301 --------------------------------------------------------------------------------  300 (423)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                             .....+.+||+.|||||++.+..|+...|+||+||++|||++|..         ||.
T Consensus       301 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~---------PF~  348 (423)
T 4fie_A          301 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP---------PYF  348 (423)
T ss_dssp             -----------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC---------TTT
T ss_pred             -----------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC---------CCC
Confidence                                   011345689999999999999999999999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhH
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAK  394 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~  394 (400)
                      . .+..+.+..|..+.++.++.+..+|+.+.+||.+||+.||++|||++|+|+||||++..++++++||++..+
T Consensus       349 ~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~p~~l~pl~~~~r  421 (423)
T 4fie_A          349 N-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR  421 (423)
T ss_dssp             T-SCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGTGGGSGGGC
T ss_pred             C-cCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCCCccccchhhhcC
Confidence            7 788888899988887777777889999999999999999999999999999999999999999999998754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.5e-52  Score=399.65  Aligned_cols=246  Identities=24%  Similarity=0.338  Sum_probs=210.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|++||++.+..++..||+|.+....  ....+++.+|+.++++++|+|||+++++|.+++.+|+|||||+||+|.
T Consensus        32 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~  111 (350)
T 4b9d_A           32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF  111 (350)
T ss_dssp             C------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            799999999999998888899999886543  334678999999999999999999999999999999999999999999


Q ss_pred             HHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +++...   .+++..++.++.||+.||.|||+++|+||||||+||+++.+|.+||+|||  +++........        
T Consensus       112 ~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG--la~~~~~~~~~--------  181 (350)
T 4b9d_A          112 KRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFG--IARVLNSTVEL--------  181 (350)
T ss_dssp             HHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTT--EESCCCHHHHH--------
T ss_pred             HHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccc--cceeecCCccc--------
Confidence            999642   57999999999999999999999999999999999999999999999999  55422111100        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (350)
T 4b9d_A          182 --------------------------------------------------------------------------------  181 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                     .++.+||+.|||||++.+..|+..+|+||+||++|||++|..       
T Consensus       182 -------------------------------~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~-------  223 (350)
T 4b9d_A          182 -------------------------------ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH-------  223 (350)
T ss_dssp             -------------------------------HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC-------
T ss_pred             -------------------------------ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCC-------
Confidence                                           123479999999999999999999999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                        ||.. .+..+.+.+|.++..+.+  +..+|+.+.+||.+||++||++|||++|+|+||||+.
T Consensus       224 --PF~~-~~~~~~~~~i~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          224 --AFEA-GSMKNLVLKIISGSFPPV--SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             --SCCC-SSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             --CCCC-cCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence              8877 788888889988876655  3458999999999999999999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=8.9e-52  Score=391.98  Aligned_cols=248  Identities=20%  Similarity=0.272  Sum_probs=215.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|++|+++.+..+...||+|.+...   .....+.+.+|+.++++++|+||++++++|.+++.+|+|||||+||+|
T Consensus        40 lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L  119 (311)
T 4aw0_A           40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL  119 (311)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             EecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCH
Confidence            69999999999998888888999987633   223457799999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.+ +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.+||+|||  ++..+..+..          
T Consensus       120 ~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFG--la~~~~~~~~----------  187 (311)
T 4aw0_A          120 LKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESK----------  187 (311)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT--TCEECCTTTT----------
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcC--CceecCCCCC----------
Confidence            999975 489999999999999999999999999999999999999999999999999  4442211100          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (311)
T 4aw0_A          188 --------------------------------------------------------------------------------  187 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .....+.+||+.|||||++.+..|+..+|.||+||++|||++|..        
T Consensus       188 ---------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~--------  232 (311)
T 4aw0_A          188 ---------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP--------  232 (311)
T ss_dssp             ---------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ---------------------------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       112456799999999999999999999999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHH------HhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASL------LLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~------~l~hp~~~~~  380 (400)
                       ||.. .+..+.+.+|.++... +  +..+|+.++|||++||++||++|||++|      +++||||+..
T Consensus       233 -PF~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          233 -PFRA-GNEGLIFAKIIKLEYD-F--PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             -SSCC-SSHHHHHHHHHHTCCC-C--CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             -CCCC-CCHHHHHHHHHcCCCC-C--CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence             8877 7778888888887543 3  4468999999999999999999999998      5899999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.1e-50  Score=380.21  Aligned_cols=245  Identities=22%  Similarity=0.356  Sum_probs=205.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+..+...||+|.+....  ....++|.+|+.++++++|||||+++++|.+    +..+|+|||||+|
T Consensus        34 iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~g  113 (290)
T 3fpq_A           34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             EecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCC
Confidence            699999999999998888999999886442  2345779999999999999999999999875    3468999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      |+|.+++.+ +.+++..++.++.||+.||.|||+++  |+||||||+||+++. +|.+||+|||  ++....     .  
T Consensus       114 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFG--la~~~~-----~--  184 (290)
T 3fpq_A          114 GTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG--LATLKR-----A--  184 (290)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTT--GGGGCC-----T--
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCc--CCEeCC-----C--
Confidence            999999975 47999999999999999999999998  999999999999974 7999999999  443100     0  


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (290)
T 3fpq_A          185 --------------------------------------------------------------------------------  184 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                        ....+.+||+.|||||++.+ +++..+|+||+||++|||++|..  
T Consensus       185 ----------------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~--  227 (290)
T 3fpq_A          185 ----------------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY--  227 (290)
T ss_dssp             ----------------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC--
T ss_pred             ----------------------------------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCC--
Confidence                                              01234589999999998875 57889999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                             ||....+.......+..+..+ ...+...++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       228 -------Pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          228 -------PYSECQNAAQIYRRVTSGVKP-ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -------TTTTCSSHHHHHHHHTTTCCC-GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -------CCCCCCcHHHHHHHHHcCCCC-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                   998755555555555555433 2334457889999999999999999999999999999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.3e-50  Score=376.83  Aligned_cols=244  Identities=19%  Similarity=0.216  Sum_probs=200.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+..++..||+|.+....   ....+++.+|+.++++++||||++++++|.+++.+|+||||| +|+|
T Consensus        21 lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L   99 (275)
T 3hyh_A           21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNEL   99 (275)
T ss_dssp             EEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEH
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCH
Confidence            699999999999998888899999876432   234577999999999999999999999999999999999999 6799


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||  ++......            
T Consensus       100 ~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFG--la~~~~~~------------  165 (275)
T 3hyh_A          100 FDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFG--LSNIMTDG------------  165 (275)
T ss_dssp             HHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSS--CC------------------
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecC--CCeecCCC------------
Confidence            988865 479999999999999999999999999999999999999999999999999  44311100            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (275)
T 3hyh_A          166 --------------------------------------------------------------------------------  165 (275)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ....+.+||+.|||||++.+..+. ..+|+||+||++|+|++|..       
T Consensus       166 ----------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~-------  210 (275)
T 3hyh_A          166 ----------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL-------  210 (275)
T ss_dssp             -------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCC-------
Confidence                                        012345899999999999988775 68999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                        ||.. .+..+.+..+.++..+ +  +..+|+.+.+||++||+.||++|||++|+|+||||+..
T Consensus       211 --PF~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          211 --PFDD-ESIPVLFKNISNGVYT-L--PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             --SSCC-SSHHHHHHHHHHTCCC-C--CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             --CCCC-CCHHHHHHHHHcCCCC-C--CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence              8876 6667777777776433 3  34589999999999999999999999999999999854

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-50  Score=388.82  Aligned_cols=254  Identities=23%  Similarity=0.277  Sum_probs=213.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|++.....     ..+|+.+++.++|+|||+++++|.+++.+|+|||||+||+|.++
T Consensus        66 lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~  140 (336)
T 4g3f_A           66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL  140 (336)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHH
Confidence            6899999999999999999999999875433     24799999999999999999999999999999999999999999


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +.+ +.+++..++.++.||+.||.|||+++|+||||||+||+++.+| .+||+|||  ++..+..+....          
T Consensus       141 l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFG--la~~~~~~~~~~----------  208 (336)
T 4g3f_A          141 IKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPDGLGK----------  208 (336)
T ss_dssp             HHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCT--TCEEC-----------------
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCC--CCeEccCCCccc----------
Confidence            975 4799999999999999999999999999999999999999987 59999999  554221111000          


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (336)
T 4g3f_A          209 --------------------------------------------------------------------------------  208 (336)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                              +.....+.+||+.|||||++.+.+++..+|+||+||++|||++|..         |
T Consensus       209 ------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~---------P  255 (336)
T 4g3f_A          209 ------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH---------P  255 (336)
T ss_dssp             -----------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC---------S
T ss_pred             ------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcC---------C
Confidence                                    0011345689999999999999999999999999999999999987         8


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH-------------hcCccccccCCCCC
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL-------------LKHPFLKIARPLAS  385 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~-------------l~hp~~~~~~~~~~  385 (400)
                      |.. .+....+..|....++....+..+++.+.+||.+||++||++|||++|+             |+|||+...+.+++
T Consensus       256 f~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~Pr~  334 (336)
T 4g3f_A          256 WTQ-YFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPRG  334 (336)
T ss_dssp             STT-TCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCCCC
T ss_pred             CCC-CCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCCCC
Confidence            876 5666667777777665444456789999999999999999999999997             68999998655543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.1e-50  Score=381.05  Aligned_cols=246  Identities=20%  Similarity=0.266  Sum_probs=202.8

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++++   ..+...||+|.+....  .....++.+|+.++++++|+|||+++++|.+++.+|+|||||+||
T Consensus        32 lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg  111 (304)
T 3ubd_A           32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG  111 (304)
T ss_dssp             EECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTC
T ss_pred             EecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCC
Confidence            68999999998853   3445566777664332  123346789999999999999999999999999999999999999


Q ss_pred             ChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          76 SLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        76 ~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +|.+++.+ +.+++..++.++.|++.||.|||+++|+||||||+||+++.+|.+||+|||  +++......         
T Consensus       112 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFG--la~~~~~~~---------  180 (304)
T 3ubd_A          112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG--LSKESIDHE---------  180 (304)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSE--EEEC--------------
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccc--cceeccCCC---------
Confidence            99999975 479999999999999999999999999999999999999999999999999  443111000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (304)
T 3ubd_A          181 --------------------------------------------------------------------------------  180 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ....+.+||+.|||||++.+..++..+|.||+||++|||++|..      
T Consensus       181 ------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~------  224 (304)
T 3ubd_A          181 ------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL------  224 (304)
T ss_dssp             ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCC------
Confidence                                          11345689999999999999999999999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                         ||.. .+..+.+..|.++..+.   +..+|+.+.+||++||++||++|||     ++|+++||||+..
T Consensus       225 ---PF~~-~~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          225 ---PFQG-KDRKETMTMILKAKLGM---PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             ---SSCC-SSHHHHHHHHHHCCCCC---CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             ---CCCC-cCHHHHHHHHHcCCCCC---CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence               9877 77888888888875432   4458999999999999999999998     5899999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.9e-48  Score=366.48  Aligned_cols=260  Identities=18%  Similarity=0.249  Sum_probs=196.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCC------------EEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGE------------ELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------------~~~l   67 (400)
                      ||+|+|+.||++.+..+...||+|.+..... ...+++.+|+.++++++|||||+++++|...+            .+|+
T Consensus        13 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~i   92 (299)
T 4g31_A           13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYI   92 (299)
T ss_dssp             EEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEE
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEE
Confidence            6999999999999988888999999875443 34577999999999999999999999987543            4799


Q ss_pred             EEeccCCCChHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          68 VMEYLPGGSLTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        68 v~e~~~~~~L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      +||||++++|.+++...    ..++..++.++.||+.||.|||+++|+||||||+||+++.+|.+||+|||  ++.....
T Consensus        93 vmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG--la~~~~~  170 (299)
T 4g31_A           93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG--LVTAMDQ  170 (299)
T ss_dssp             EEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC--CC-----
T ss_pred             EEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc--cceecCC
Confidence            99999999999999754    24566789999999999999999999999999999999999999999999  5553322


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .......                                                                         
T Consensus       171 ~~~~~~~-------------------------------------------------------------------------  177 (299)
T 4g31_A          171 DEEEQTV-------------------------------------------------------------------------  177 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Ccccccc-------------------------------------------------------------------------
Confidence            2111100                                                                         


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                        ..........++.+||+.|||||++.+..++..+|+||+||++|||
T Consensus       178 ----------------------------------~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyel  223 (299)
T 4g31_A          178 ----------------------------------LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL  223 (299)
T ss_dssp             ------------------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             ----------------------------------ccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence                                              0000001124456899999999999999999999999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      ++            ||....+....+..+.....|.  .....++.+.+||++||+.||++|||++|+|+||||++..-+
T Consensus       224 l~------------Pf~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p  289 (299)
T 4g31_A          224 LY------------PFSTQMERVRTLTDVRNLKFPP--LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFP  289 (299)
T ss_dssp             HS------------CCSSHHHHHHHHHHHHTTCCCH--HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC---
T ss_pred             cc------------CCCCccHHHHHHHHHhcCCCCC--CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCC
Confidence            83            6655444555555555554332  244567788999999999999999999999999999975443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3e-47  Score=370.31  Aligned_cols=274  Identities=16%  Similarity=0.175  Sum_probs=202.1

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||+++++   ....+||+|.+....  ...++.+|+.+++.+ +|+||++++++|.+++++|+||||+++++
T Consensus        29 lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~  106 (361)
T 4f9c_A           29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHES  106 (361)
T ss_dssp             EEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCC
T ss_pred             EecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCccc
Confidence            699999999999653   456889999876443  345688999999998 69999999999999999999999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.++++  .+++..++.++.|++.||.|||++||+||||||+||+++.+ +.++|+|||  +++...........     
T Consensus       107 L~~~~~--~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFG--la~~~~~~~~~~~~-----  177 (361)
T 4f9c_A          107 FLDILN--SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFG--LAQGTHDTKIELLK-----  177 (361)
T ss_dssp             HHHHHT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT--TCEECTTCSCGGGG-----
T ss_pred             HHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCC--CCcccCCccccccc-----
Confidence            999985  48999999999999999999999999999999999999877 899999999  55422221111000     


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                              +...+.                                  ..                ..            
T Consensus       178 --------~~~~~~----------------------------------~~----------------~~------------  187 (361)
T 4f9c_A          178 --------FVQSEA----------------------------------QQ----------------ER------------  187 (361)
T ss_dssp             --------GC----------------------------------------------------------------------
T ss_pred             --------cccccc----------------------------------cc----------------cc------------
Confidence                    000000                                  00                00            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                      +................+.+||+.|+|||++.+.+ ++...|+||+||++|||++|..      
T Consensus       188 ----------------~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~------  245 (361)
T 4f9c_A          188 ----------------CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY------  245 (361)
T ss_dssp             ----------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS------
T ss_pred             ----------------cccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC------
Confidence                            00000000001112345679999999999998865 5678899999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhC---------------------------------------------------CCCCcchh
Q psy9736         315 FLIPYLFILSCRQALYLIATN---------------------------------------------------KKPEIKEK  343 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~---------------------------------------------------~~~~~~~~  343 (400)
                         ||....+..+.+..|.+-                                                   .......+
T Consensus       246 ---Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  322 (361)
T 4f9c_A          246 ---PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGW  322 (361)
T ss_dssp             ---SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------C
T ss_pred             ---CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccc
Confidence               998766666666555321                                                   00011123


Q ss_pred             hhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         344 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       344 ~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ..+|+.+.|||++||++||++|+|++|+|+||||++.
T Consensus       323 ~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          323 NEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             TTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            4578899999999999999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.7e-47  Score=362.47  Aligned_cols=246  Identities=17%  Similarity=0.269  Sum_probs=207.4

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||+++.     ......||+|.++.......++|.+|+.++++++|+|||++++++.+++.+++|||||++|
T Consensus        21 lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G  100 (299)
T 4asz_A           21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG  100 (299)
T ss_dssp             EEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             EeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCC
Confidence            69999999999853     3456789999987666666788999999999999999999999999999999999999999


Q ss_pred             ChHHHHhh--------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          76 SLTDVVTE--------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        76 ~L~~~i~~--------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +|.+++..              ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  +++..
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFG--la~~~  178 (299)
T 4asz_A          101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG--MSRDV  178 (299)
T ss_dssp             BHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCS--CHHHH
T ss_pred             cHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcc--cceec
Confidence            99999964              258999999999999999999999999999999999999999999999999  55422


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      .......                                                                         
T Consensus       179 ~~~~~~~-------------------------------------------------------------------------  185 (299)
T 4asz_A          179 YSTDYYR-------------------------------------------------------------------------  185 (299)
T ss_dssp             TGGGCEE-------------------------------------------------------------------------
T ss_pred             CCCCcee-------------------------------------------------------------------------
Confidence            1111000                                                                         


Q ss_pred             ccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhh
Q psy9736         222 EELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~  301 (400)
                                                                  ......||+.|||||++.+..++..+|+||+|+++|
T Consensus       186 --------------------------------------------~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~  221 (299)
T 4asz_A          186 --------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW  221 (299)
T ss_dssp             --------------------------------------------ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             --------------------------------------------ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence                                                        012336899999999999999999999999999999


Q ss_pred             hhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         302 EFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       302 ~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ||++ |..         ||.. .+..+.+..+.++..+..  +..+++.+.+||.+||+.||++|||++++  |+||++
T Consensus       222 Ellt~G~~---------Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~  286 (299)
T 4asz_A          222 EIFTYGKQ---------PWYQ-LSNNEVIECITQGRVLQR--PRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN  286 (299)
T ss_dssp             HHHTTTCC---------TTTT-SCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred             HHHcCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence            9998 776         8877 778888888888866554  44689999999999999999999999999  567775

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.1e-47  Score=372.27  Aligned_cols=254  Identities=19%  Similarity=0.216  Sum_probs=204.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEe------CCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV------GEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~------~~~~~lv~e~~   72 (400)
                      ||+|+|+.|+++.+..++..||+|++.....  ...+++.+|+.+|+.++|+|||++++++..      .+.+|+|||||
T Consensus        62 lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~  141 (398)
T 4b99_A           62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM  141 (398)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECC
T ss_pred             EecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCC
Confidence            6999999999999999999999999864432  345678899999999999999999998764      35799999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      + |+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||  +++.+......    
T Consensus       142 ~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFG--la~~~~~~~~~----  214 (398)
T 4b99_A          142 E-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG--MARGLCTSPAE----  214 (398)
T ss_dssp             S-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT--TCBCC----------
T ss_pred             C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecc--eeeecccCccc----
Confidence            5 689988875 479999999999999999999999999999999999999999999999999  44422111100    


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       215 --------------------------------------------------------------------------------  214 (398)
T 4b99_A          215 --------------------------------------------------------------------------------  214 (398)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                     ......+.+||+.|||||++.+.. ++...|+||+||++|||++|..  
T Consensus       215 -------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~--  261 (398)
T 4b99_A          215 -------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ--  261 (398)
T ss_dssp             --------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSC--
T ss_pred             -------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCC--
Confidence                                           011244569999999999988764 4678899999999999999986  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhC--CCCC---------------------cc-----hhhhhcHHHHHHHHHhhhhhh
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATN--KKPE---------------------IK-----EKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~--~~~~---------------------~~-----~~~~~s~~~~dli~~~L~~dP  362 (400)
                             ||.. .+..+.+..|...  .++.                     .+     ....+++.+.|||.+||++||
T Consensus       262 -------pF~g-~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP  333 (398)
T 4b99_A          262 -------LFPG-KNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP  333 (398)
T ss_dssp             -------SSCC-SSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSST
T ss_pred             -------CCCC-CCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCCh
Confidence                   8876 6666666666432  1100                     00     012357899999999999999


Q ss_pred             hhhhcHHHHhcCccccccCC
Q psy9736         363 ETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ++|||++|+|+||||+....
T Consensus       334 ~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          334 SARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             TTSCCHHHHTTSGGGTTTCC
T ss_pred             hHCcCHHHHhcCHhhCcCCC
Confidence            99999999999999997543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.5e-46  Score=359.15  Aligned_cols=243  Identities=18%  Similarity=0.258  Sum_probs=203.5

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||+++     +......||+|.+........++|.+|+.++++++|+|||++++++.+++.+++|||||++|
T Consensus        49 LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G  128 (329)
T 4aoj_A           49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG  128 (329)
T ss_dssp             EEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             EccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            6999999999985     34556789999988766666788999999999999999999999999999999999999999


Q ss_pred             ChHHHHhh----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          76 SLTDVVTE----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        76 ~L~~~i~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      +|.+++..                +.+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  +++
T Consensus       129 ~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFG--la~  206 (329)
T 4aoj_A          129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG--MSR  206 (329)
T ss_dssp             BHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             cHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccc--cce
Confidence            99999863                248999999999999999999999999999999999999999999999999  554


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ........                                                                        
T Consensus       207 ~~~~~~~~------------------------------------------------------------------------  214 (329)
T 4aoj_A          207 DIYSTDYY------------------------------------------------------------------------  214 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eccCCCcc------------------------------------------------------------------------
Confidence            22111100                                                                        


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   ......+||+.|||||++.+..++..+|+||+|++
T Consensus       215 ---------------------------------------------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvv  249 (329)
T 4aoj_A          215 ---------------------------------------------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV  249 (329)
T ss_dssp             --------------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ---------------------------------------------eecCcccccccccChhhhcCCCCCccccccchHHH
Confidence                                                         01223479999999999999999999999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|||++ |..         ||.. .+..+.+..+.++..+..  +..+++.+.+||.+||+.||++|||++|++++
T Consensus       250 l~Ellt~G~~---------Pf~~-~~~~~~~~~i~~g~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          250 LWEIFTYGKQ---------PWYQ-LSNTEAIDCITQGRELER--PRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHTTSCC---------TTCS-SCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--cccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            999998 776         8877 677788888888865554  45689999999999999999999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=9.2e-46  Score=350.77  Aligned_cols=268  Identities=60%  Similarity=0.869  Sum_probs=236.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+......||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.++
T Consensus        28 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (297)
T 3fxz_A           28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  107 (297)
T ss_dssp             EEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred             eccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHH
Confidence            58999999999998888889999998776666678899999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.......               
T Consensus       108 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~---------------  170 (297)
T 3fxz_A          108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--FCAQITPEQ---------------  170 (297)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECCSTT---------------
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCC--CceecCCcc---------------
Confidence            998889999999999999999999999999999999999999999999999999  332111000               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (297)
T 3fxz_A          171 --------------------------------------------------------------------------------  170 (297)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              .......||+.|+|||++.+..++..+|+||+|+++|+|++|..         ||.
T Consensus       171 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~---------pf~  217 (297)
T 3fxz_A          171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---------PYL  217 (297)
T ss_dssp             ------------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSC---------TTT
T ss_pred             ------------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC---------CCC
Confidence                                    01234478999999999999888899999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHhcC
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKG  399 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~~~  399 (400)
                      . .+.......+.....+.+..+..++..+.+||.+||+.||++|||++|+++||||+...+.+++.|++..++++.+.
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~~~p~~~~~~~~~~~  295 (297)
T 3fxz_A          218 N-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKN  295 (297)
T ss_dssp             T-SCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCGGGGHHHHHHHHHHC--
T ss_pred             C-CCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCcccccchHHHHHhhhhhc
Confidence            7 66667777777666666666778999999999999999999999999999999999999999999999999998763

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=6e-46  Score=381.80  Aligned_cols=252  Identities=20%  Similarity=0.256  Sum_probs=218.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.|+++.+..++..||+|.+........+.+.+|+.+|+.++|+||++++++|.++..+|++||||+||+|.++
T Consensus       165 lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~  244 (573)
T 3uto_A          165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK  244 (573)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             EeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHH
Confidence            68999999999999999999999998776666678899999999999999999999999999999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC--CceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD--GSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +..  +.+++..++.++.||+.||.|||+++|+||||||+||+++.+  +.+||+|||  ++..+....           
T Consensus       245 i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG--~a~~~~~~~-----------  311 (573)
T 3uto_A          245 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG--LTAHLDPKQ-----------  311 (573)
T ss_dssp             HTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCS--SCEECCTTS-----------
T ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeecc--ceeEccCCC-----------
Confidence            853  479999999999999999999999999999999999999864  899999999  444221100           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       312 --------------------------------------------------------------------------------  311 (573)
T 3uto_A          312 --------------------------------------------------------------------------------  311 (573)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.+||+.|||||++.+..++..+|+||+||++|||++|..        
T Consensus       312 -----------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~--------  354 (573)
T 3uto_A          312 -----------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS--------  354 (573)
T ss_dssp             -----------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC--------
T ss_pred             -----------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC--------
Confidence                                         0234489999999999999999899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                       ||.. .+..+.+..|...... ....+..+|+.++|||++||+.||++|||++|+|+||||+....+.
T Consensus       355 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          355 -PFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             -SSCC-SSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred             -CCCC-cCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence             8877 7778888888776433 2233456899999999999999999999999999999999754433

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.8e-45  Score=348.63  Aligned_cols=243  Identities=14%  Similarity=0.189  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.     +......||+|.+.... ....+.|.+|+.++++++|+|||++++++.+++.+++|||||++
T Consensus        34 lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~  113 (308)
T 4gt4_A           34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH  113 (308)
T ss_dssp             EEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSS
T ss_pred             eccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCC
Confidence            6899999999986     34456789999886543 23467899999999999999999999999998999999999999


Q ss_pred             CChHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhh
Q psy9736          75 GSLTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFI  137 (400)
Q Consensus        75 ~~L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~  137 (400)
                      |+|.+++..                 ..+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||  +
T Consensus       114 G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFG--l  191 (308)
T 4gt4_A          114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG--L  191 (308)
T ss_dssp             CBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSC--C
T ss_pred             CcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcc--c
Confidence            999999853                 248999999999999999999999999999999999999999999999999  5


Q ss_pred             hhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccc
Q psy9736         138 ATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDS  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
                      ++........                                                                      
T Consensus       192 ar~~~~~~~~----------------------------------------------------------------------  201 (308)
T 4gt4_A          192 FREVYAADYY----------------------------------------------------------------------  201 (308)
T ss_dssp             BCGGGGGGCB----------------------------------------------------------------------
T ss_pred             ceeccCCCce----------------------------------------------------------------------
Confidence            4422111100                                                                      


Q ss_pred             ccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCcc
Q psy9736         218 YLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLT  297 (400)
Q Consensus       218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g  297 (400)
                                                                     ......+||+.|||||++.+..++..+|+||+|
T Consensus       202 -----------------------------------------------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG  234 (308)
T 4gt4_A          202 -----------------------------------------------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG  234 (308)
T ss_dssp             -----------------------------------------------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             -----------------------------------------------eEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence                                                           012345799999999999999999999999999


Q ss_pred             chhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         298 GSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       298 ~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +++|||++ |..         ||.. .+..+....+..+..+..  +.++++.+.+|+.+||+.||++|||+.|++++
T Consensus       235 vvl~El~t~g~~---------Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          235 VVLWEVFSYGLQ---------PYCG-YSNQDVVEMIRNRQVLPC--PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHTTTCC---------TTTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999998 765         8776 777788888877765544  45689999999999999999999999999865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-44  Score=342.77  Aligned_cols=242  Identities=19%  Similarity=0.299  Sum_probs=190.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|++||+++...   .||+|.++...  ....+.|.+|+.++++++|+|||++++++. ++.+++|||||++|+|.
T Consensus        44 iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A           44 IGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             CCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHH
T ss_pred             EeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHH
Confidence            7999999999997654   46777765432  234578999999999999999999999875 45689999999999999


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  ++.........         
T Consensus       120 ~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFG--la~~~~~~~~~---------  188 (307)
T 3omv_A          120 KHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFG--LATVKSRWSGS---------  188 (307)
T ss_dssp             HHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCS--SCBC----------------
T ss_pred             HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeecc--CceecccCCcc---------
Confidence            99964  469999999999999999999999999999999999999999999999999  44421111000         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       189 --------------------------------------------------------------------------------  188 (307)
T 3omv_A          189 --------------------------------------------------------------------------------  188 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC---CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK---NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  ....+.+||+.|||||++...   +++..+|+||+|+++|||++|..     
T Consensus       189 ----------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~-----  235 (307)
T 3omv_A          189 ----------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL-----  235 (307)
T ss_dssp             ---------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCC-----
Confidence                                        012345899999999999753   46678999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCC-CCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKK-PEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||....+.......+.++.. |.++ .+.++++.+.+||.+||+.||++|||++|++++
T Consensus       236 ----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          236 ----PYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             ----TTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             ----CCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                99874444444444444422 2222 245688999999999999999999999987543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1e-44  Score=372.80  Aligned_cols=245  Identities=19%  Similarity=0.286  Sum_probs=201.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHH---HHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINE---ILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E---i~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|++|+++.+..++..||+|++....   ......+.+|   +.+++.++|||||+++++|++.+.+|+|||||+|
T Consensus       197 LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~G  276 (689)
T 3v5w_A          197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG  276 (689)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCC
Confidence            699999999999888888888888875321   1122334444   5666678999999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      |+|..++.+ +.+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||  ++....    ..     
T Consensus       277 GdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFG--lA~~~~----~~-----  345 (689)
T 3v5w_A          277 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG--LACDFS----KK-----  345 (689)
T ss_dssp             CBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCT--TCEECS----SC-----
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccc--eeeecC----CC-----
Confidence            999999975 479999999999999999999999999999999999999999999999999  443110    00     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       346 --------------------------------------------------------------------------------  345 (689)
T 3v5w_A          346 --------------------------------------------------------------------------------  345 (689)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ...+.+||+.|||||++.+ ..|+...|.||+||++|||++|..    
T Consensus       346 --------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~----  389 (689)
T 3v5w_A          346 --------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS----  389 (689)
T ss_dssp             --------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC----
Confidence                                            1234689999999999974 577889999999999999999987    


Q ss_pred             cccccCcchhh--cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         313 PHFLIPYLFIL--SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                           ||....  +..+....+..... .+  +..+|+.+++||.+||++||++|++     ++|+++||||+..
T Consensus       390 -----PF~~~~~~~~~~i~~~i~~~~~-~~--p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          390 -----PFRQHKTKDKHEIDRMTLTMAV-EL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             -----TTCGGGCCCHHHHHHHHHHCCC-CC--CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             -----CCCCCChHHHHHHHHhhcCCCC-CC--CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence                 997632  33444455555433 33  4568999999999999999999998     7999999999863

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.9e-43  Score=337.29  Aligned_cols=266  Identities=37%  Similarity=0.586  Sum_probs=231.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+...+..||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+++++|.++
T Consensus        53 lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~  132 (321)
T 2c30_A           53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI  132 (321)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHH
T ss_pred             eccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHH
Confidence            58999999999988877888999988766666678899999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +....+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......               
T Consensus       133 l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg--~~~~~~~~~---------------  195 (321)
T 2c30_A          133 VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG--FCAQISKDV---------------  195 (321)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECCSSS---------------
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeee--eeeecccCc---------------
Confidence            988889999999999999999999999999999999999999999999999999  332111000               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       196 --------------------------------------------------------------------------------  195 (321)
T 2c30_A          196 --------------------------------------------------------------------------------  195 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              .......||+.|+|||++.+..+...+|.||+|+++|||++|..         ||.
T Consensus       196 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~---------pf~  242 (321)
T 2c30_A          196 ------------------------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP---------PYF  242 (321)
T ss_dssp             ------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC---------TTT
T ss_pred             ------------------------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC---------CCC
Confidence                                    01223478999999999998888889999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHHh
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAA  397 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~~  397 (400)
                      . .+.......+....++.+.....+++.+.+||.+||+.||++|||++++++||||.....++.+.++++.+++..
T Consensus       243 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~~~~~  318 (321)
T 2c30_A          243 S-DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT  318 (321)
T ss_dssp             T-SCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCCCGGGGHHHHHHC----
T ss_pred             C-CCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCCCcccchHHHHHHHHhh
Confidence            6 667777777777777777667778999999999999999999999999999999999999999999999888754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.4e-43  Score=341.25  Aligned_cols=244  Identities=18%  Similarity=0.267  Sum_probs=199.3

Q ss_pred             CCcceEEEEEecCC----C-ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCC-CCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD----R-RFFSKILSNPITLAQQ-PKKELIINEILVMRENKH-PNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~----~-~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||+|+|++||++..    . .....||+|.+..... ...+.|.+|+.+|+++.| +|||+++++|... +.+++|||||
T Consensus        72 LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~  151 (353)
T 4ase_A           72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  151 (353)
T ss_dssp             EEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECC
T ss_pred             EecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcC
Confidence            69999999999853    2 2335689998865433 345679999999999965 8999999998764 5789999999


Q ss_pred             CCCChHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccch
Q psy9736          73 PGGSLTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        73 ~~~~L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~  135 (400)
                      ++|+|.++++.                 ..+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+||| 
T Consensus       152 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFG-  230 (353)
T 4ase_A          152 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG-  230 (353)
T ss_dssp             TTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCG-
T ss_pred             CCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcch-
Confidence            99999999963                 137899999999999999999999999999999999999999999999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       +++....+....                                                                   
T Consensus       231 -lar~~~~~~~~~-------------------------------------------------------------------  242 (353)
T 4ase_A          231 -LARDIYKDPDYV-------------------------------------------------------------------  242 (353)
T ss_dssp             -GGSCTTTCTTSE-------------------------------------------------------------------
T ss_pred             -hhhhcccCCCce-------------------------------------------------------------------
Confidence             554222111100                                                                   


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                        ...+.+||+.|||||++.+..++..+|+||
T Consensus       243 --------------------------------------------------~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS  272 (353)
T 4ase_A          243 --------------------------------------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWS  272 (353)
T ss_dssp             --------------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             --------------------------------------------------eeccccccccccCHHHHhcCCCCCcccEee
Confidence                                                              023447899999999999999999999999


Q ss_pred             ccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         296 LTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       296 ~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|+++|||++ |..         ||............+..+..+..  +..+++.+.+||.+||+.||++|||++++++|
T Consensus       273 ~Gv~l~El~t~G~~---------Pf~~~~~~~~~~~~i~~g~~~~~--p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          273 FGVLLWEIFSLGAS---------PYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHHHTTTSCC---------SSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHhCCCC---------CCCCCCHHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            9999999998 776         88774445555566666655544  44588999999999999999999999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=7.2e-42  Score=328.78  Aligned_cols=248  Identities=18%  Similarity=0.273  Sum_probs=210.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.|+++.+...+..||+|.+....  ....+++.+|+.+++.++|+||+++++++.+++..++||||+++++|.
T Consensus        23 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~  102 (328)
T 3fe3_A           23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF  102 (328)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHH
Confidence            589999999999988888889999876442  234567889999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.......            
T Consensus       103 ~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~~------------  168 (328)
T 3fe3_A          103 DYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG--FSNEFTVGG------------  168 (328)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTT--CCGGGSSSC------------
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeecc--CceecCCCC------------
Confidence            98864 579999999999999999999999999999999999999999999999999  333111000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (328)
T 3fe3_A          169 --------------------------------------------------------------------------------  168 (328)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .....+||+.|+|||++.+..+. ..+|+||+|+++|+|++|..        
T Consensus       169 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~--------  212 (328)
T 3fe3_A          169 ----------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL--------  212 (328)
T ss_dssp             ----------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCC--------
Confidence                                        02234789999999999988765 67999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                       ||.. .+.......+..+... +  +..+++.+.+||++||+.||++|||++|+++||||+.....
T Consensus       213 -pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~~  274 (328)
T 3fe3_A          213 -PFDG-QNLKELRERVLRGKYR-I--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE  274 (328)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCTT
T ss_pred             -CCCC-CCHHHHHHHHHhCCCC-C--CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCcc
Confidence             8876 6667777777776432 2  33478899999999999999999999999999999865443

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=6.4e-41  Score=326.27  Aligned_cols=248  Identities=19%  Similarity=0.266  Sum_probs=208.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.|+++.+...+..||+|.+.....      ...+.+.+|+.++++++|+||++++++|.++..+++||||+++
T Consensus        20 LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~g   99 (361)
T 2yab_A           20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSG   99 (361)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCC
Confidence            5899999999998777777777777654322      1357789999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++... .+++..+..++.|++.||.|||+.||+||||||+||+++.++    .++|+|||  .+.....    . 
T Consensus       100 g~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG--~a~~~~~----~-  172 (361)
T 2yab_A          100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG--LAHEIED----G-  172 (361)
T ss_dssp             CBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS--SCEECCT----T-
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC--CceEcCC----C-
Confidence            9999999754 799999999999999999999999999999999999998877    79999999  3331100    0 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (361)
T 2yab_A          173 --------------------------------------------------------------------------------  172 (361)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ......+||+.|+|||++.+..++..+|+||+|+++|+|++|.. 
T Consensus       173 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~-  216 (361)
T 2yab_A          173 -----------------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-  216 (361)
T ss_dssp             -----------------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC-
T ss_pred             -----------------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCC-
Confidence                                               01233479999999999998888899999999999999999986 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||.. .+..+.+..+........ ..+..+++.+.+||++||..||++|||++|+|+||||+..
T Consensus       217 --------Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          217 --------PFLG-DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             --------SSCC-SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             --------CCCC-CCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence                    8877 667777777776644322 2235688999999999999999999999999999999853

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=8.5e-41  Score=322.47  Aligned_cols=245  Identities=21%  Similarity=0.293  Sum_probs=207.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......||+|.+...   .....+.+.+|+.+++.++|+||+++++++.+.+..++||||+++++|
T Consensus        13 lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L   92 (337)
T 1o6l_A           13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL   92 (337)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence            68999999999988777778888877532   223456788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++.....    .        
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG--~a~~~~~----~--------  158 (337)
T 1o6l_A           93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG--LCKEGIS----D--------  158 (337)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCSCC----T--------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeecc--chhhccc----C--------
Confidence            998875 479999999999999999999999999999999999999999999999999  3321000    0        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (337)
T 1o6l_A          159 --------------------------------------------------------------------------------  158 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..        
T Consensus       159 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~--------  203 (337)
T 1o6l_A          159 ---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--------  203 (337)
T ss_dssp             ---------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             ---------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCC--------
Confidence                                       001234589999999999999888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                       ||.. .+.......+...... +  +..+++.+.+||.+||+.||++||     +++++++||||+.
T Consensus       204 -Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          204 -PFYN-QDHERLFELILMEEIR-F--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             -CCCC-CCHHHHHHHHHcCCCC-C--CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence             8876 5666666666665432 2  345889999999999999999999     9999999999975

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=4.4e-41  Score=326.47  Aligned_cols=246  Identities=20%  Similarity=0.274  Sum_probs=206.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|++|+++.+......||+|.+...   .....+.+.+|+.+++.+ +|+||+++++++.+.+..|+||||+++++
T Consensus        31 lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~  110 (353)
T 3txo_A           31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGD  110 (353)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             EeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCc
Confidence            68999999999988777777888877532   223456688999999998 79999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |..++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++.....    .       
T Consensus       111 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG--~a~~~~~----~-------  177 (353)
T 3txo_A          111 LMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG--MCKEGIC----N-------  177 (353)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCSCC------------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEcccc--ceeeccc----C-------
Confidence            9999875 479999999999999999999999999999999999999999999999999  3331000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (353)
T 3txo_A          178 --------------------------------------------------------------------------------  177 (353)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       178 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~-------  222 (353)
T 3txo_A          178 ----------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA-------  222 (353)
T ss_dssp             ------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCC-------
Confidence                                        001334589999999999999888899999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH------HHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA------SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~------~~~l~hp~~~~~  380 (400)
                        ||.. .+..+....|..+....   +..++..+.+||++||+.||++||++      +++++||||+..
T Consensus       223 --Pf~~-~~~~~~~~~i~~~~~~~---p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          223 --PFEA-ENEDDLFEAILNDEVVY---PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCCCC---CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             --CCCC-CCHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence              8877 67777888887775432   33478899999999999999999999      899999999863

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.8e-41  Score=322.36  Aligned_cols=253  Identities=16%  Similarity=0.240  Sum_probs=182.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||+++.  .+..||+|.+..... ....+..|+..+.+++|+|||++++++..++    .+|+|||||++|+
T Consensus        11 iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gs   87 (303)
T 3hmm_A           11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             EEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             EeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCc
Confidence            68999999999865  467899998864432 2222345566667889999999999998653    6899999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSN--------QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      |.+++....++++.+..++.|++.||.|||++        +|+||||||+||+++.++.+||+|||  +++.........
T Consensus        88 L~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG--la~~~~~~~~~~  165 (303)
T 3hmm_A           88 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG--LAVRHDSATDTI  165 (303)
T ss_dssp             HHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT--TCEEEETTTTEE
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC--CCccccCCCCce
Confidence            99999988999999999999999999999986        99999999999999999999999999  544221111000


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (303)
T 3hmm_A          166 --------------------------------------------------------------------------------  165 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC------CCcccCCCCccchhhh
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN------KNQTTPPTGLTGSILE  302 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~d~~s~g~~~~~  302 (400)
                                                         .......+||+.|||||++.+..      ++..+|+||+|+++||
T Consensus       166 -----------------------------------~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E  210 (303)
T 3hmm_A          166 -----------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  210 (303)
T ss_dssp             -----------------------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence                                               00123457999999999997652      3357899999999999


Q ss_pred             hcCCCC-cccccccccCcchhh---cHHHHHHHH-HhC-CCCCcchh---hhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         303 FLGPHK-WSFQPHFLIPYLFIL---SCRQALYLI-ATN-KKPEIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       303 ~~~gd~-ws~g~~~~~P~~~~~---~~~~~~~~i-~~~-~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |++|.. +........||....   .....+... ... ..|.++..   ...+..+.+|+.+||+.||++|||+.|+++
T Consensus       211 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            999843 111111133554311   122333333 222 23444332   124457899999999999999999999986

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-40  Score=319.72  Aligned_cols=247  Identities=23%  Similarity=0.284  Sum_probs=210.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+......+|+|.+.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||||+++++|.++
T Consensus        13 lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~   91 (321)
T 1tki_A           13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER   91 (321)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHH
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHH
Confidence            589999999999988888889999886543 3556789999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC--CCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL--DGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +...  .+++..+..++.|++.||.|||+.+++||||||+||+++.  ++.++|+|||  .+.......           
T Consensus        92 l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg--~a~~~~~~~-----------  158 (321)
T 1tki_A           92 INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG--QARQLKPGD-----------  158 (321)
T ss_dssp             HTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCT--TCEECCTTC-----------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECC--CCeECCCCC-----------
Confidence            9754  6999999999999999999999999999999999999987  7899999999  333111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (321)
T 1tki_A          159 --------------------------------------------------------------------------------  158 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|.||+|+++|+|++|..        
T Consensus       159 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~--------  201 (321)
T 1tki_A          159 -----------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN--------  201 (321)
T ss_dssp             -----------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCC--------
Confidence                                         0122368889999999988877789999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+..+...... .+..++..+.+||++||..||++|||+.|+|+||||+..
T Consensus       202 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          202 -PFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -TTCC-SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -CCcC-CCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence             8877 6667777777776543322 234688999999999999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.8e-40  Score=313.07  Aligned_cols=251  Identities=22%  Similarity=0.282  Sum_probs=200.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+......||+|.+.....  ...+.+.+|+.++++++|+||+++++++.+++..++||||+++ ++.
T Consensus        10 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~   88 (292)
T 3o0g_A           10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLK   88 (292)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHH
T ss_pred             ecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHH
Confidence            5899999999999888888899998864432  2347788999999999999999999999999999999999965 665


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.+..  +.+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||  .+.......           
T Consensus        89 ~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~-----------  155 (292)
T 3o0g_A           89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFG--LARAFGIPV-----------  155 (292)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCSCC-----------
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc--cceecCCcc-----------
Confidence            55543  479999999999999999999999999999999999999999999999999  333110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (292)
T 3o0g_A          156 --------------------------------------------------------------------------------  155 (292)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......||+.|+|||++.+.. ++..+|+||+|+++|+|++|..       
T Consensus       156 ----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~-------  200 (292)
T 3o0g_A          156 ----------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR-------  200 (292)
T ss_dssp             ----------------------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSC-------
T ss_pred             ----------------------------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCC-------
Confidence                                        0122346889999999998765 6788999999999999999876       


Q ss_pred             ccCcchhhcHHHHHHHHHhCC--CC--C----------------------cchhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         316 LIPYLFILSCRQALYLIATNK--KP--E----------------------IKEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~--~~--~----------------------~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                        ||....+..+.+..+.+..  +.  .                      ......++..+.+||++||+.||++|||++
T Consensus       201 --p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  278 (292)
T 3o0g_A          201 --PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE  278 (292)
T ss_dssp             --CSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             --CCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHH
Confidence              7766566666666554320  00  0                      001123678999999999999999999999


Q ss_pred             HHhcCccccccCC
Q psy9736         370 LLLKHPFLKIARP  382 (400)
Q Consensus       370 ~~l~hp~~~~~~~  382 (400)
                      |+|+||||+...+
T Consensus       279 e~l~hp~f~~~~p  291 (292)
T 3o0g_A          279 EALQHPYFSDFCP  291 (292)
T ss_dssp             HHHTSGGGTTC--
T ss_pred             HHhcCcccccCCC
Confidence            9999999997544

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-40  Score=316.28  Aligned_cols=249  Identities=19%  Similarity=0.268  Sum_probs=207.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.|+++.+......||+|.+.....      ...+.+.+|+.+++.++|+||+++++++..+...++||||+++
T Consensus        19 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   98 (326)
T 2y0a_A           19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG   98 (326)
T ss_dssp             EECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCC
Confidence            5899999999998877777788877654322      2467799999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++... .+++..+..++.|++.||.|||+.+++||||||+||+++.++    .++|+|||  .+......     
T Consensus        99 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg--~a~~~~~~-----  171 (326)
T 2y0a_A           99 GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG--LAHKIDFG-----  171 (326)
T ss_dssp             CBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCT--TCEECCTT-----
T ss_pred             CCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECC--CCeECCCC-----
Confidence            9999999754 799999999999999999999999999999999999999887    79999999  33311000     


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (326)
T 2y0a_A          172 --------------------------------------------------------------------------------  171 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         .......||+.|+|||++....+...+|.||+|+++|+|++|.. 
T Consensus       172 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~-  215 (326)
T 2y0a_A          172 -----------------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-  215 (326)
T ss_dssp             -----------------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC-
T ss_pred             -----------------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcC-
Confidence                                               00223468999999999998888889999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                              ||.. .+..+.+..+........ ..+..++..+.+||++||+.||++|||++++|+||||+...
T Consensus       216 --------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          216 --------PFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             --------SSCC-SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             --------CCCC-CCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence                    8876 556666666665543222 22356788999999999999999999999999999998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.1e-40  Score=321.14  Aligned_cols=261  Identities=30%  Similarity=0.499  Sum_probs=220.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+.....   ...+.+.+|+.++++++|+||+++++++..++..++||||+. |++
T Consensus        62 lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l  140 (348)
T 1u5q_A           62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA  140 (348)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred             EccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCH
Confidence            5899999999999888888999998865432   234668899999999999999999999999999999999996 588


Q ss_pred             HHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++.  ...+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+....             
T Consensus       141 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG--~a~~~~-------------  205 (348)
T 1u5q_A          141 SDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG--SASIMA-------------  205 (348)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCT--TCBSSS-------------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeecc--CceecC-------------
Confidence            87775  3479999999999999999999999999999999999999999999999999  332110             


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (348)
T 1u5q_A          206 --------------------------------------------------------------------------------  205 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                    +.....||+.|+|||++.   ...+...+|+||+|+++|||++|..    
T Consensus       206 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~----  251 (348)
T 1u5q_A          206 ------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP----  251 (348)
T ss_dssp             ------------------------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSC----
T ss_pred             ------------------------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCC----
Confidence                                          012236888999999885   3455678999999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMA  392 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~  392 (400)
                           ||.. .+....+..+..+..+... ...++..+.+||.+||+.||++|||++++++||||...+++....+++..
T Consensus       252 -----p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~  324 (348)
T 1u5q_A          252 -----PLFN-MNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQR  324 (348)
T ss_dssp             -----TTTT-SCHHHHHHHHHHSCCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHHHHHH
T ss_pred             -----CCCC-CChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCCcchhhHHHHH
Confidence                 8776 6667777777777655443 34578899999999999999999999999999999999999999999998


Q ss_pred             hHHHhc
Q psy9736         393 AKEAAK  398 (400)
Q Consensus       393 ~~~~~~  398 (400)
                      .+++.+
T Consensus       325 ~~~~~~  330 (348)
T 1u5q_A          325 TKDAVR  330 (348)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888765

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4.5e-41  Score=332.49  Aligned_cols=250  Identities=21%  Similarity=0.260  Sum_probs=207.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++........||+|.+....   ....+.+.+|+.+++.++|+||++++++|.++..+|+||||+++++|
T Consensus        77 LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L  156 (410)
T 3v8s_A           77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL  156 (410)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             EEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            689999999999887777778888764311   11224478999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+++....+++..++.++.|++.||.|||+++|+||||||+||+++.+|.++|+|||  ++........           
T Consensus       157 ~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG--~a~~~~~~~~-----------  223 (410)
T 3v8s_A          157 VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGM-----------  223 (410)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCTTSE-----------
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccc--eeEeeccCCc-----------
Confidence            999988889999999999999999999999999999999999999999999999999  4331111000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       224 --------------------------------------------------------------------------------  223 (410)
T 3v8s_A          224 --------------------------------------------------------------------------------  223 (410)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC----CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN----KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                 ....+.+||+.|+|||++.+..    ++..+|.||+|+++|||++|..     
T Consensus       224 ---------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~-----  271 (410)
T 3v8s_A          224 ---------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT-----  271 (410)
T ss_dssp             ---------------------------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ---------------------------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCC-----
Confidence                                       0123458999999999998765    5578999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                          ||.. .+.......|.... ...++....++..+.+||++||+.+|.+  |++++|+++||||+..
T Consensus       272 ----Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          272 ----PFYA-DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             ----TTCC-SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             ----CCCC-CChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence                8877 67777777776542 1223334458899999999999988988  9999999999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-40  Score=317.57  Aligned_cols=242  Identities=21%  Similarity=0.291  Sum_probs=206.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+...+..||+|.+....   ....+.+.+|+.+++.++|+||+++++++.+....++||||+++++|
T Consensus        14 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L   93 (318)
T 1fot_A           14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL   93 (318)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCH
Confidence            589999999999877777778888765321   22456788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+++|+||||||+||+++.+|.++|+|||  ++...    ..         
T Consensus        94 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg--~a~~~----~~---------  158 (318)
T 1fot_A           94 FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG--FAKYV----PD---------  158 (318)
T ss_dssp             HHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCS--SCEEC----SS---------
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecC--cceec----CC---------
Confidence            999975 479999999999999999999999999999999999999999999999999  33210    00         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (318)
T 1fot_A          159 --------------------------------------------------------------------------------  158 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.+||+.|+|||++.+..++..+|.||+|+++|||++|..        
T Consensus       159 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~--------  201 (318)
T 1fot_A          159 -----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT--------  201 (318)
T ss_dssp             -----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCC--------
Confidence                                         0123479999999999999888899999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                       ||.. .+.......+...... +  +..+++.+.+||.+||+.||++|+     +++++++||||+.
T Consensus       202 -pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          202 -PFYD-SNTMKTYEKILNAELR-F--PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             -TTCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             -CCCC-CCHHHHHHHHHhCCCC-C--CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence             8877 6677777777776432 2  345788999999999999999999     9999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.2e-40  Score=329.77  Aligned_cols=248  Identities=19%  Similarity=0.219  Sum_probs=206.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.|+++.+...+..+|+|.+.....  ...+.+.+|+.+++.++|+||+++++++.+++..++||||+.+++|.
T Consensus        19 LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~   98 (444)
T 3soa_A           19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF   98 (444)
T ss_dssp             EEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHH
T ss_pred             eccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHH
Confidence            6899999999998877778888887764432  23567899999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec---CCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG---LDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.. +.+++..+..++.|++.||.|||+++|+||||||+||+++   .++.++|+|||  ++.......         
T Consensus        99 ~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG--~a~~~~~~~---------  167 (444)
T 3soa_A           99 EDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG--LAIEVEGEQ---------  167 (444)
T ss_dssp             HHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCS--SCBCCCTTC---------
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCc--eeEEecCCC---------
Confidence            98875 4799999999999999999999999999999999999998   45789999999  332111000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (444)
T 3soa_A          168 --------------------------------------------------------------------------------  167 (444)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..++..+|+||+|+++|+|++|..      
T Consensus       168 ------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~------  211 (444)
T 3soa_A          168 ------------------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP------  211 (444)
T ss_dssp             ------------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCC------
Confidence                                          01223479999999999999888899999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||.. .+..+....+..+.... .+.+..+++.+.+||++||+.||++|||++|+|+||||+.
T Consensus       212 ---Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          212 ---PFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             ---SCCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             ---CCCC-ccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence               8877 66777777777764332 2234568899999999999999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.8e-40  Score=312.63  Aligned_cols=266  Identities=30%  Similarity=0.490  Sum_probs=221.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||.+.+......|++|.+........+.+.+|+.+++.++|+||+++++++..++..++|+||+++++|.++
T Consensus        27 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~  106 (302)
T 2j7t_A           27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI  106 (302)
T ss_dssp             EECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHH
T ss_pred             eccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHH
Confidence            58899999999998888888999988766656678899999999999999999999999999999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........           
T Consensus       107 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~-----------  173 (302)
T 2j7t_A          107 MLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG--VSAKNLKTLQK-----------  173 (302)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCH--HHHHHHHHHHC-----------
T ss_pred             HHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECC--CCccccccccc-----------
Confidence            864  469999999999999999999999999999999999999999999999999  33311110000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (302)
T 2j7t_A          174 --------------------------------------------------------------------------------  173 (302)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  .....||+.|+|||++.     ...+...+|.|++|+++|+|++|..     
T Consensus       174 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~-----  220 (302)
T 2j7t_A          174 ----------------------------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP-----  220 (302)
T ss_dssp             ---------------------------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCC-----
Confidence                                        11235788889999873     4556678999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          ||.. .+.......+.....+....+..++..+.+||.+||+.||++|||++++++||||+.......+.+++...
T Consensus       221 ----p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~~  295 (302)
T 2j7t_A          221 ----PHHE-LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEA  295 (302)
T ss_dssp             ----TTTT-SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCHHHHHHHHHH
T ss_pred             ----CCcc-CCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccchhHHHHHHHH
Confidence                7766 66677777777777666666677899999999999999999999999999999999988888888888877


Q ss_pred             HHHh
Q psy9736         394 KEAA  397 (400)
Q Consensus       394 ~~~~  397 (400)
                      +.-.
T Consensus       296 ~~~~  299 (302)
T 2j7t_A          296 KAEV  299 (302)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            6644

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=2e-40  Score=321.58  Aligned_cols=248  Identities=22%  Similarity=0.267  Sum_probs=203.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-----cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.+......||+|.+....     ....+.+.+|+.+++.++|+||+++++++..++..++||||++++
T Consensus        32 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~  111 (351)
T 3c0i_A           32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA  111 (351)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSC
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCC
Confidence            589999999999888888888888875321     124577899999999999999999999999999999999999999


Q ss_pred             ChHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc---eEEeccchhhhhhhccccch
Q psy9736          76 SLTDVVTET-----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        76 ~L~~~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~  147 (400)
                      +|.+.+...     .+++..++.++.|++.||.|||+++|+||||||+||+++.++.   ++|+|||  .+.......  
T Consensus       112 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg--~a~~~~~~~--  187 (351)
T 3c0i_A          112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG--VAIQLGESG--  187 (351)
T ss_dssp             BHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT--TCEECCTTS--
T ss_pred             CHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc--ceeEecCCC--
Confidence            998877532     4899999999999999999999999999999999999987654   9999999  333111000  


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (351)
T 3c0i_A          188 --------------------------------------------------------------------------------  187 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                           ......+||+.|+|||++.+..+...+|+||+|+++|+|++|.
T Consensus       188 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  230 (351)
T 3c0i_A          188 -------------------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC  230 (351)
T ss_dssp             -------------------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             -------------------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCC
Confidence                                                 0022347999999999999888888999999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      .         ||...  .......+.++..... ..+..++..+.+||++||+.||++|||+.++|+||||+..
T Consensus       231 ~---------pf~~~--~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          231 L---------PFYGT--KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             C---------SSCSS--HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             C---------CCCCc--HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            7         88763  3345555555543322 2335678999999999999999999999999999999863

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.4e-40  Score=319.01  Aligned_cols=252  Identities=18%  Similarity=0.222  Sum_probs=203.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+..... ...+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.+
T Consensus        15 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~   94 (323)
T 3tki_A           15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD   94 (323)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGG
T ss_pred             EecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHH
Confidence            6899999999998888888889998764432 234668899999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      ++... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  ++.........           
T Consensus        95 ~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg--~a~~~~~~~~~-----------  161 (323)
T 3tki_A           95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG--LATVFRYNNRE-----------  161 (323)
T ss_dssp             GSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECEETTEE-----------
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEee--ccceeccCCcc-----------
Confidence            98765 69999999999999999999999999999999999999999999999999  44311111000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (323)
T 3tki_A          162 --------------------------------------------------------------------------------  161 (323)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                ......+||+.|+|||++.+..+ ...+|+|++|+++|+|++|..         
T Consensus       162 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~---------  206 (323)
T 3tki_A          162 --------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL---------  206 (323)
T ss_dssp             --------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC---------
T ss_pred             --------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCC---------
Confidence                                      01233478999999999987765 357999999999999999987         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ||................ ......+..++..+.+||++||+.||++|||++|+++||||+...
T Consensus       207 pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          207 PWDQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             SCSSSCTTSHHHHHHHTT-CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             CCCCCchHHHHHHHHhcc-cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            887633332333333332 333444566899999999999999999999999999999998643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3.1e-40  Score=322.94  Aligned_cols=252  Identities=22%  Similarity=0.252  Sum_probs=207.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+...+..||+|.+........+.+.+|+.++++++|+||+++++++...+..++||||+++++|.++
T Consensus        97 lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~  176 (373)
T 2x4f_A           97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR  176 (373)
T ss_dssp             CC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHH
T ss_pred             EecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            69999999999988888889999998766655678899999999999999999999999999999999999999999988


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe--cCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL--GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +...  .+++..+..++.|++.||.|||+.+|+||||||+||++  +.++.++|+|||  ++......            
T Consensus       177 l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG--~a~~~~~~------------  242 (373)
T 2x4f_A          177 IIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG--LARRYKPR------------  242 (373)
T ss_dssp             HHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCS--SCEECCTT------------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCC--CceecCCc------------
Confidence            8643  69999999999999999999999999999999999999  566889999999  33311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       243 --------------------------------------------------------------------------------  242 (373)
T 2x4f_A          243 --------------------------------------------------------------------------------  242 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++....+...+|+|++|+++|||++|..        
T Consensus       243 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~--------  286 (373)
T 2x4f_A          243 ----------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS--------  286 (373)
T ss_dssp             ----------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCC--------
Confidence                                        00123368999999999988877789999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                       ||.. .+..+.+..+....... ......+++.+.+||.+||+.||++|||++|+|+||||+..+..+
T Consensus       287 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~~~  353 (373)
T 2x4f_A          287 -PFLG-DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHS  353 (373)
T ss_dssp             -TTCC-SSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCchhh
Confidence             8877 56667777777664322 223356889999999999999999999999999999999765433

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=7.4e-40  Score=318.95  Aligned_cols=247  Identities=18%  Similarity=0.245  Sum_probs=207.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+......||+|.+....  ....+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus        37 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~  116 (362)
T 2bdw_A           37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF  116 (362)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHH
Confidence            589999999999888778888888876543  234467889999999999999999999999999999999999999999


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+... .+++..+..++.|++.||.|||+++|+||||||+||+++.+   +.++|+|||  ++....    ..      
T Consensus       117 ~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG--~a~~~~----~~------  184 (362)
T 2bdw_A          117 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG--LAIEVN----DS------  184 (362)
T ss_dssp             HHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCT--TCBCCT----TC------
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecC--cceEec----CC------
Confidence            888654 68999999999999999999999999999999999999865   459999999  332110    00      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (362)
T 2bdw_A          185 --------------------------------------------------------------------------------  184 (362)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..+...+|+||+|+++|+|++|..      
T Consensus       185 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~------  228 (362)
T 2bdw_A          185 ------------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP------  228 (362)
T ss_dssp             ------------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCC------
Confidence                                          01223478999999999999888899999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||.. .+..+....+..+... ..+.+..+++.+.+||.+||+.||++|||++++|+||||..
T Consensus       229 ---Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          229 ---PFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             ---SSCC-SSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             ---CCCC-CCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence               8877 5666677777666432 22334568999999999999999999999999999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2e-40  Score=320.81  Aligned_cols=246  Identities=21%  Similarity=0.305  Sum_probs=208.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.|+++........||+|.+....   ....+.+.+|..+++.+ +|+||+++++++.+....|+||||+++++
T Consensus        25 lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~  104 (345)
T 1xjd_A           25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGD  104 (345)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCc
Confidence            589999999999888888888888875431   22446678899999886 99999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. +.+++..++.++.|++.||.|||++||+||||||+||+++.+|.++|+|||  ++.....    .       
T Consensus       105 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG--~a~~~~~----~-------  171 (345)
T 1xjd_A          105 LMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG--MCKENML----G-------  171 (345)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCCCC----T-------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeECh--hhhhccc----C-------
Confidence            9999975 579999999999999999999999999999999999999999999999999  3321000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (345)
T 1xjd_A          172 --------------------------------------------------------------------------------  171 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       172 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~-------  216 (345)
T 1xjd_A          172 ----------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS-------  216 (345)
T ss_dssp             ----------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCC-------
Confidence                                        001334589999999999999888899999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH-HHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS-LLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~-~~l~hp~~~~~  380 (400)
                        ||.. .+..+....+..+.. .+  +..++..+.+||.+||+.||++||++. ++++||||+..
T Consensus       217 --Pf~~-~~~~~~~~~i~~~~~-~~--p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          217 --PFHG-QDEEELFHSIRMDNP-FY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCC-CC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             --CCCC-CCHHHHHHHHHhCCC-CC--CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence              8876 666777777776643 23  334889999999999999999999998 99999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=312.36  Aligned_cols=246  Identities=18%  Similarity=0.297  Sum_probs=197.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------------------------chHHHHHHHHHHHHhCCCCCccc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------------------------PKKELIINEILVMRENKHPNIVN   54 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------------------------~~~~~~~~Ei~~l~~l~h~niv~   54 (400)
                      ||+|+|+.||++.+......||+|.+.....                          ...+.+.+|+.++++++|+||++
T Consensus        21 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~  100 (298)
T 2zv2_A           21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVK  100 (298)
T ss_dssp             EEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCC
T ss_pred             EeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCe
Confidence            5899999999998877778888888754321                          12356889999999999999999


Q ss_pred             ccceeEe--CCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEec
Q psy9736          55 YLDSYLV--GEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        55 ~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      +++++..  +...++||||+++++|.++.....+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|
T Consensus       101 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~D  180 (298)
T 2zv2_A          101 LVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIAD  180 (298)
T ss_dssp             EEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             EEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEec
Confidence            9999986  56899999999999999887777899999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceee
Q psy9736         133 WNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIV  212 (400)
Q Consensus       133 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (400)
                      ||  ++........                                                                  
T Consensus       181 fg--~~~~~~~~~~------------------------------------------------------------------  192 (298)
T 2zv2_A          181 FG--VSNEFKGSDA------------------------------------------------------------------  192 (298)
T ss_dssp             CT--TCEECSSSSC------------------------------------------------------------------
T ss_pred             CC--Cccccccccc------------------------------------------------------------------
Confidence            99  3331110000                                                                  


Q ss_pred             eecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC---Cc
Q psy9736         213 NYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK---NQ  289 (400)
Q Consensus       213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~  289 (400)
                                                                           ......||+.|+|||++.+...   ..
T Consensus       193 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~  219 (298)
T 2zv2_A          193 -----------------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGK  219 (298)
T ss_dssp             -----------------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESH
T ss_pred             -----------------------------------------------------cccCCcCCccccChhhhccCCCCCCCc
Confidence                                                                 0122368999999999987653   45


Q ss_pred             ccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         290 TTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                      .+|.||+|+++|+|++|..         ||.. .+.......+..... ..+....+++.+.+||.+||+.||++|||++
T Consensus       220 ~~Di~slG~~l~~l~~g~~---------pf~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~  288 (298)
T 2zv2_A          220 ALDVWAMGVTLYCFVFGQC---------PFMD-ERIMCLHSKIKSQAL-EFPDQPDIAEDLKDLITRMLDKNPESRIVVP  288 (298)
T ss_dssp             HHHHHHHHHHHHHHHHSSC---------SSCC-SSHHHHHHHHHHCCC-CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred             hhhhHhHHHHHHHHHHCCC---------CCCC-ccHHHHHHHHhcccC-CCCCccccCHHHHHHHHHHhhcChhhCCCHH
Confidence            6899999999999999987         8876 455555555555432 2233345788999999999999999999999


Q ss_pred             HHhcCcccc
Q psy9736         370 LLLKHPFLK  378 (400)
Q Consensus       370 ~~l~hp~~~  378 (400)
                      |+++||||+
T Consensus       289 e~l~hp~~~  297 (298)
T 2zv2_A          289 EIKLHPWVT  297 (298)
T ss_dssp             HHTTCHHHH
T ss_pred             HHhcCcccc
Confidence            999999996

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.8e-40  Score=322.92  Aligned_cols=257  Identities=25%  Similarity=0.361  Sum_probs=199.3

Q ss_pred             CCcc--eEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRG--VTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G--~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|  +++.||++.+......||+|.+....  ....+.+.+|+.+++.++|+||+++++++..++..++||||+++++
T Consensus        33 lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  112 (389)
T 3gni_B           33 IGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGS  112 (389)
T ss_dssp             EEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             ccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCC
Confidence            5888  99999999988888889999886543  2334678899999999999999999999999999999999999999


Q ss_pred             hHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          77 LTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        77 L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      |.+++..   ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+..........     
T Consensus       113 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg--~~~~~~~~~~~~-----  185 (389)
T 3gni_B          113 AKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLR--SNLSMISHGQRQ-----  185 (389)
T ss_dssp             HHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGG--GCEECEETTEEC-----
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccc--cceeeccccccc-----
Confidence            9999875   469999999999999999999999999999999999999999999999999  332111110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                          ..          
T Consensus       186 --------------------------------------------------------------------~~----------  187 (389)
T 3gni_B          186 --------------------------------------------------------------------RV----------  187 (389)
T ss_dssp             --------------------------------------------------------------------SC----------
T ss_pred             --------------------------------------------------------------------cc----------
Confidence                                                                                00          


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                   .........||+.|+|||++.+  ..++..+|+||+|+++|||++|..   
T Consensus       188 -----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~---  235 (389)
T 3gni_B          188 -----------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV---  235 (389)
T ss_dssp             -----------------------------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSC---
T ss_pred             -----------------------------cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCC---
Confidence                                         0001223478999999999987  567788999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCC-------------------------------------------CCcchhhhhcH
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKK-------------------------------------------PEIKEKEKLSQ  348 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~-------------------------------------------~~~~~~~~~s~  348 (400)
                            ||.. .+.......+..+..                                           +..+.+..+++
T Consensus       236 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  308 (389)
T 3gni_B          236 ------PFKD-MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSP  308 (389)
T ss_dssp             ------TTTT-CCSTTHHHHC--------------------------------------------------------CCH
T ss_pred             ------CCCC-CCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCH
Confidence                  7765 222222222221111                                           01112344778


Q ss_pred             HHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         349 IFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       349 ~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      .+.+||++||+.||++|||++|+|+||||+...
T Consensus       309 ~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          309 HFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            899999999999999999999999999999744

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.1e-39  Score=309.18  Aligned_cols=264  Identities=32%  Similarity=0.478  Sum_probs=224.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||++.+......|++|.+.... ....+.+.+|+.+++.++|+||+++++++..+...++||||+++++|.+
T Consensus        30 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  109 (303)
T 3a7i_A           30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD  109 (303)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHH
T ss_pred             hcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHH
Confidence            588999999999877777888888876543 2346788999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccccc
Q psy9736          80 VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVA  159 (400)
Q Consensus        80 ~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
                      ++..+.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......              
T Consensus       110 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg--~~~~~~~~~--------------  173 (303)
T 3a7i_A          110 LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFG--VAGQLTDTQ--------------  173 (303)
T ss_dssp             HHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECBTTB--------------
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecc--cceecCccc--------------
Confidence            9998889999999999999999999999999999999999999999999999999  333111000              


Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE  239 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (303)
T 3a7i_A          174 --------------------------------------------------------------------------------  173 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCc
Q psy9736         240 KTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPY  319 (400)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~  319 (400)
                                               .......||+.|+|||++.+..+...+|.|++|+++|+|++|..         ||
T Consensus       174 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~---------p~  219 (303)
T 3a7i_A          174 -------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---------PH  219 (303)
T ss_dssp             -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC---------TT
T ss_pred             -------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCC---------CC
Confidence                                     01223468899999999988888889999999999999999986         77


Q ss_pred             chhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc-cCCCCCcchhhhhhHHHh
Q psy9736         320 LFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI-ARPLASLTPLIMAAKEAA  397 (400)
Q Consensus       320 ~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~-~~~~~~l~~~~~~~~~~~  397 (400)
                      .. .+.......+..+..+.+.  ..++..+.+||.+||+.||++|||++++++||||.. ....+.+.+++..+++..
T Consensus       220 ~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (303)
T 3a7i_A          220 SE-LHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWK  295 (303)
T ss_dssp             TT-SCHHHHHHHHHHSCCCCCC--SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCGGGGHHHHHHHHHHH
T ss_pred             CC-cCHHHHHHHhhcCCCCCCc--cccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCccHHHHHHHHHHHHhh
Confidence            66 6667777777777655543  357889999999999999999999999999999986 555778888888888764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3.3e-40  Score=324.78  Aligned_cols=248  Identities=20%  Similarity=0.304  Sum_probs=200.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|++|++++.......||+|.+....   ....+.+.+|..+++++ +|+||++++++|.++...++||||+++++
T Consensus        60 LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~  139 (396)
T 4dc2_A           60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD  139 (396)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCc
Confidence            689999999999877777777777765332   22234578899999886 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |..++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++.....    .       
T Consensus       140 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG--la~~~~~----~-------  206 (396)
T 4dc2_A          140 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGLR----P-------  206 (396)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCCCC----T-------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecc--eeeeccc----C-------
Confidence            9998875 479999999999999999999999999999999999999999999999999  3331000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       207 --------------------------------------------------------------------------------  206 (396)
T 4dc2_A          207 --------------------------------------------------------------------------------  206 (396)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       207 ----------------------------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~-------  251 (396)
T 4dc2_A          207 ----------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS-------  251 (396)
T ss_dssp             ----------------------------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCC-------
Confidence                                        011345689999999999999988899999999999999999987       


Q ss_pred             ccCcchh-------hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH------HHHhcCcccccc
Q psy9736         316 LIPYLFI-------LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA------SLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~------~~~l~hp~~~~~  380 (400)
                        ||...       ......+.+.+......+  +..++..+.+||++||+.||++|+++      +|+++||||+..
T Consensus       252 --Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          252 --PFDIVGSSDNPDQNTEDYLFQVILEKQIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             --SSTTTTC------CCHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             --CCcccccccccchhhHHHHHHHHhccccCC--CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence              88532       112233333333333333  34588999999999999999999985      899999999853

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.8e-40  Score=321.41  Aligned_cols=268  Identities=22%  Similarity=0.272  Sum_probs=194.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCC-CCCcccccceeEeCC--EEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENK-HPNIVNYLDSYLVGE--ELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~--~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.+......||+|++...  .....+++.+|+.+++.+. |+||+++++++..++  .+|+||||++ +
T Consensus        17 lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~   95 (388)
T 3oz6_A           17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-T   95 (388)
T ss_dssp             -------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-E
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-c
Confidence            69999999999988888888999987533  2334567889999999997 999999999997543  7999999996 5


Q ss_pred             ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          76 SLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        76 ~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +|..++..+.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||  ++..........       
T Consensus        96 ~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~~~~~-------  166 (388)
T 3oz6_A           96 DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFG--LSRSFVNIRRVT-------  166 (388)
T ss_dssp             EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEESSSCCCCC-------
T ss_pred             CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCc--cccccccccccc-------
Confidence            99999988889999999999999999999999999999999999999999999999999  444221110000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                          ...    |-.                                  ..                .             
T Consensus       167 ----~~~----~~~----------------------------------~~----------------~-------------  175 (388)
T 3oz6_A          167 ----NNI----PLS----------------------------------IN----------------E-------------  175 (388)
T ss_dssp             ----CCG----GGC----------------------------------CC------------------------------
T ss_pred             ----ccc----ccc----------------------------------cc----------------c-------------
Confidence                000    000                                  00                0             


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                          ...............+||+.|+|||++.+ ..++..+|+||+||++|||++|..      
T Consensus       176 --------------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~------  229 (388)
T 3oz6_A          176 --------------------NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP------  229 (388)
T ss_dssp             ----------------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             --------------------cccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCC------
Confidence                                00000011122445689999999999987 566788999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC-CCc---------------------------------c----------hhhhhcHHH
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK-PEI---------------------------------K----------EKEKLSQIF  350 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~-~~~---------------------------------~----------~~~~~s~~~  350 (400)
                         ||.. .+....+..+..... |..                                 +          .+...++.+
T Consensus       230 ---pf~~-~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (388)
T 3oz6_A          230 ---IFPG-SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA  305 (388)
T ss_dssp             ---SCCC-SSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHH
T ss_pred             ---CCCC-CCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHH
Confidence               7766 555555555542210 000                                 0          011457789


Q ss_pred             HHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         351 QDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       351 ~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      .+||++||+.||++|||++|+|+||||+.
T Consensus       306 ~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          306 LDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             HHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            99999999999999999999999999875

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=8.2e-40  Score=317.51  Aligned_cols=245  Identities=17%  Similarity=0.223  Sum_probs=209.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.|+++.+......||+|.+...   .....+.+.+|..+++.+ +|+||+++++++.+.+..|+||||++|++
T Consensus        28 lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~  107 (353)
T 2i0e_A           28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD  107 (353)
T ss_dssp             EEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCc
Confidence            68999999999999888888999987643   123456788999999987 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. +.+++..++.++.|++.||.|||+.||+||||||+||+++.+|.++|+|||  ++.....    .       
T Consensus       108 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG--~a~~~~~----~-------  174 (353)
T 2i0e_A          108 LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG--MCKENIW----D-------  174 (353)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCCCC----T-------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCC--ccccccc----C-------
Confidence            9999875 579999999999999999999999999999999999999999999999999  3321000    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (353)
T 2i0e_A          175 --------------------------------------------------------------------------------  174 (353)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       175 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~-------  219 (353)
T 2i0e_A          175 ----------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA-------  219 (353)
T ss_dssp             ----------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCC-------
Confidence                                        011334589999999999999888899999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                        ||.. .+..+....|...... +  +..++..+.+||++||+.||++||     +++++++||||+.
T Consensus       220 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          220 --PFEG-EDEDELFQSIMEHNVA-Y--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             --CCCC-CCHHHHHHHHHhCCCC-C--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence              8876 6777777777776433 2  345889999999999999999999     5799999999975

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.5e-40  Score=319.08  Aligned_cols=242  Identities=20%  Similarity=0.287  Sum_probs=207.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+......||+|.+....   ....+.+.+|+.+++.++|+||+++++++.++...|+||||+++++|
T Consensus        49 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L  128 (350)
T 1rdq_E           49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM  128 (350)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             eecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcH
Confidence            589999999999887777788888775331   22456788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+++|+||||||+||+++.+|.++|+|||  .+...    ..         
T Consensus       129 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg--~a~~~----~~---------  193 (350)
T 1rdq_E          129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG--FAKRV----KG---------  193 (350)
T ss_dssp             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEEC----SS---------
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccc--cceec----cC---------
Confidence            999975 579999999999999999999999999999999999999999999999999  33311    00         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (350)
T 1rdq_E          194 --------------------------------------------------------------------------------  193 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.+||+.|+|||++.+..+...+|.||+|+++|||++|..        
T Consensus       194 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~--------  236 (350)
T 1rdq_E          194 -----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP--------  236 (350)
T ss_dssp             -----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCC--------
Confidence                                         0123478999999999998888899999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~  379 (400)
                       ||.. .+..+....+..+... +  +..++..+.+||++||+.||++||+     ++++++||||+.
T Consensus       237 -Pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          237 -PFFA-DQPIQIYEKIVSGKVR-F--PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCC-C--CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             -CCCC-CCHHHHHHHHHcCCCC-C--CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence             8876 6777777778777432 2  3458899999999999999999999     999999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-39  Score=320.23  Aligned_cols=249  Identities=21%  Similarity=0.249  Sum_probs=209.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+......||+|.+..........+.+|+.+++.++|+||+++++++..+...++||||+++++|.++
T Consensus        59 LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~  138 (387)
T 1kob_A           59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR  138 (387)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             EecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHH
Confidence            58999999999988888888899988765555567789999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC--CCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL--DGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +...  .+++..+..++.|++.||.|||+.+|+||||||+||+++.  .+.++|+|||  ++.......           
T Consensus       139 l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG--~a~~~~~~~-----------  205 (387)
T 1kob_A          139 IAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG--LATKLNPDE-----------  205 (387)
T ss_dssp             TTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCT--TCEECCTTS-----------
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecc--cceecCCCc-----------
Confidence            8753  6899999999999999999999999999999999999974  4779999999  433111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (387)
T 1kob_A          206 --------------------------------------------------------------------------------  205 (387)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..++..+|+||+|+++|||++|..        
T Consensus       206 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~--------  248 (387)
T 1kob_A          206 -----------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS--------  248 (387)
T ss_dssp             -----------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC--------
T ss_pred             -----------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCC--------
Confidence                                         0122368999999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                       ||.. .+..+.+..+....... ......+++.+.+||++||+.||++|||++++|+||||+...
T Consensus       249 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          249 -PFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             -CCCC-CCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence             8877 66667777776654322 122345888999999999999999999999999999999643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=308.03  Aligned_cols=262  Identities=31%  Similarity=0.510  Sum_probs=219.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||.|+++.||.+.+...+..|++|.+....  ..+.+.+|+.+++.++|+||+++++++..++..+++|||+++++|.++
T Consensus        37 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  114 (314)
T 3com_A           37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI  114 (314)
T ss_dssp             CC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHH
Confidence            689999999999888888889999886543  346688999999999999999999999999999999999999999999


Q ss_pred             Hh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +.  ...+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......             
T Consensus       115 ~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg--~~~~~~~~~-------------  179 (314)
T 3com_A          115 IRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG--VAGQLTDTM-------------  179 (314)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECBTTB-------------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecc--cchhhhhhc-------------
Confidence            86  3479999999999999999999999999999999999999999999999999  332111000             


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (314)
T 3com_A          180 --------------------------------------------------------------------------------  179 (314)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                .......||+.|+|||++.+..+...+|.|++|+++|+|++|..         |
T Consensus       180 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~---------p  224 (314)
T 3com_A          180 --------------------------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKP---------P  224 (314)
T ss_dssp             --------------------------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSC---------T
T ss_pred             --------------------------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCC---------C
Confidence                                      01223468899999999998888889999999999999999987         8


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHH
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKE  395 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~  395 (400)
                      |.. .+.......+.....+.+..+..++..+.+||.+||..||++|||+.++++||||+.....+.+.+++.....
T Consensus       225 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~~~  300 (314)
T 3com_A          225 YAD-IHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEAMD  300 (314)
T ss_dssp             TTT-SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCGGGGHHHHHHHC-
T ss_pred             CCC-CChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcchHHHHHhhhhhh
Confidence            876 5666666677777666666677789999999999999999999999999999999998888888877765543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=315.00  Aligned_cols=251  Identities=19%  Similarity=0.258  Sum_probs=198.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+......||+|.+....  ..+.+.+|+.++++++|+||+++++++..+...++||||+++++|.++
T Consensus        61 lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~  138 (349)
T 2w4o_A           61 LGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR  138 (349)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             EeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHH
Confidence            589999999999988888889999876432  346688999999999999999999999999999999999999999998


Q ss_pred             Hhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +... .+++..+..++.|++.||.|||+.+++||||||+||+++.   ++.++|+|||  .+.......           
T Consensus       139 l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg--~a~~~~~~~-----------  205 (349)
T 2w4o_A          139 IVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFG--LSKIVEHQV-----------  205 (349)
T ss_dssp             HTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------------
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCc--cccccCccc-----------
Confidence            8754 6899999999999999999999999999999999999976   7899999999  433110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (349)
T 2w4o_A          206 --------------------------------------------------------------------------------  205 (349)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|+||+|+++|||++|..        
T Consensus       206 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~--------  248 (349)
T 2w4o_A          206 -----------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE--------  248 (349)
T ss_dssp             ------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCC--------
Confidence                                         0123468999999999998888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                       ||............+......... .+..++..+.+||++||+.||++|||++++|+||||+......
T Consensus       249 -pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~  316 (349)
T 2w4o_A          249 -PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANF  316 (349)
T ss_dssp             -TTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCC
T ss_pred             -CCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccch
Confidence             887755555566666655433222 2345788999999999999999999999999999999765543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-39  Score=315.33  Aligned_cols=246  Identities=20%  Similarity=0.300  Sum_probs=201.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.|++++.......||+|.+...   .....+.+.+|+.+++++ +|+||+++++++.++...++||||+++++
T Consensus        17 lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~   96 (345)
T 3a8x_A           17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD   96 (345)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCc
Confidence            68999999999988777777888877543   223346688999999997 89999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. +.+++..++.++.|++.||.|||+++|+||||||+||+++.+|.++|+|||  ++....    ..       
T Consensus        97 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG--~a~~~~----~~-------  163 (345)
T 3a8x_A           97 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG--MCKEGL----RP-------  163 (345)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGG--GCBCSC----CT-------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecc--cccccc----CC-------
Confidence            9998875 479999999999999999999999999999999999999999999999999  332100    00       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (345)
T 3a8x_A          164 --------------------------------------------------------------------------------  163 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       164 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~-------  208 (345)
T 3a8x_A          164 ----------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS-------  208 (345)
T ss_dssp             ----------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCC-------
Confidence                                        001234589999999999999888889999999999999999986       


Q ss_pred             ccCcchh--------hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH------HHHhcCccccc
Q psy9736         316 LIPYLFI--------LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA------SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~--------~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~------~~~l~hp~~~~  379 (400)
                        ||...        .........+.... ..+  +..++..+.+||.+||+.||++||++      +++++||||+.
T Consensus       209 --pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          209 --PFDIVGSSDNPDQNTEDYLFQVILEKQ-IRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             --TTTTTTC-------CHHHHHHHHHHCC-CCC--CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             --CcCCcccccccccccHHHHHHHHHcCC-CCC--CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence              87541        11223333444443 333  34588999999999999999999995      89999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.4e-39  Score=310.08  Aligned_cols=259  Identities=20%  Similarity=0.293  Sum_probs=200.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+........+.+.+|+.+++++ +|+||+++++++..++..++||||+++++|.+
T Consensus        21 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  100 (316)
T 2ac3_A           21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS  100 (316)
T ss_dssp             CCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHH
T ss_pred             ecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHH
Confidence            69999999999998888889999998766555677899999999995 79999999999999999999999999999999


Q ss_pred             HHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc---eEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++.. ..+++..++.++.|++.||.|||+++++||||||+||+++.++.   ++|+|||  .+..........       
T Consensus       101 ~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg--~~~~~~~~~~~~-------  171 (316)
T 2ac3_A          101 HIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFD--LGSGIKLNGDCS-------  171 (316)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTT--CCC----------------
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEcc--CccccccCCccc-------
Confidence            9875 47999999999999999999999999999999999999988766   9999999  333111100000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (316)
T 2ac3_A          172 --------------------------------------------------------------------------------  171 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----CCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----KNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                               ..........+||+.|+|||++..     ..+...+|+||+|+++|+|++|..  
T Consensus       172 -------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~--  224 (316)
T 2ac3_A          172 -------------------------PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP--  224 (316)
T ss_dssp             -----------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSC--
T ss_pred             -------------------------cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCC--
Confidence                                     000011223468999999999875     345578999999999999999976  


Q ss_pred             cccccccCcchhhc--------------HHHHHHHHHhCCCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         311 FQPHFLIPYLFILS--------------CRQALYLIATNKKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       311 ~g~~~~~P~~~~~~--------------~~~~~~~i~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                             ||.....              .......+..+.. .++.  ...++..+.+||++||+.||++|||++|+|+|
T Consensus       225 -------pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          225 -------PFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             -------SCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -------CCcccccccccccccccchhHHHHHHHHHhccCc-ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                   7755211              1223344444432 2222  24578899999999999999999999999999


Q ss_pred             ccccccCCC
Q psy9736         375 PFLKIARPL  383 (400)
Q Consensus       375 p~~~~~~~~  383 (400)
                      |||+...+.
T Consensus       297 p~~~~~~~~  305 (316)
T 2ac3_A          297 PWVQGCAPE  305 (316)
T ss_dssp             TTCC-----
T ss_pred             hhhcCCCCc
Confidence            999975543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.4e-39  Score=312.32  Aligned_cols=249  Identities=18%  Similarity=0.211  Sum_probs=189.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+...   ....+.+|+.+++.+. |+||+++++++.++...++||||+++++|.+
T Consensus        19 lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           19 LGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             cccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            68999999999998888888999987533   3466789999999996 9999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC---ceEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG---SVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++... .+++..++.++.|++.||.|||+++|+||||||+||+++..+   .++|+|||  .+.......          
T Consensus        96 ~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg--~a~~~~~~~----------  163 (325)
T 3kn6_A           96 RIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG--FARLKPPDN----------  163 (325)
T ss_dssp             HHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCT--TCEECCC------------
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccc--cceecCCCC----------
Confidence            99764 699999999999999999999999999999999999998765   89999999  333110000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (325)
T 3kn6_A          164 --------------------------------------------------------------------------------  163 (325)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......+||+.|+|||++.+..+...+|.||+|+++|+|++|..       
T Consensus       164 -----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~-------  207 (325)
T 3kn6_A          164 -----------------------------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQV-------  207 (325)
T ss_dssp             -------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSC-------
T ss_pred             -----------------------------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCC-------
Confidence                                         01223468999999999999888899999999999999999987       


Q ss_pred             ccCcchhh------cHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         316 LIPYLFIL------SCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       316 ~~P~~~~~------~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                        ||....      ...+....+..+.... ...+..+++.+.+||++||+.||++|||++++++||||+....
T Consensus       208 --pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          208 --PFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             --TTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             --CCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence              886532      2345555665554332 2233568999999999999999999999999999999997544

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.8e-39  Score=303.53  Aligned_cols=246  Identities=19%  Similarity=0.245  Sum_probs=207.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+......|++|.+........+.+.+|+.++++++|+||+++++++..+...++||||+++++|.++
T Consensus        17 lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (277)
T 3f3z_A           17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFER   96 (277)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             EeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHH
Confidence            58999999999988888888888888765555677899999999999999999999999999999999999999999988


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.. ..+++..+..++.|++.||.|||+++++|+||||+||++   +.++.++|+|||  .+......            
T Consensus        97 ~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg--~~~~~~~~------------  162 (277)
T 3f3z_A           97 VVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFG--LAARFKPG------------  162 (277)
T ss_dssp             HHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT--TCEECCTT------------
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecc--cceeccCc------------
Confidence            865 468999999999999999999999999999999999999   788999999999  33211000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (277)
T 3f3z_A          163 --------------------------------------------------------------------------------  162 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+. +...+|.|++|+++|+|++|..        
T Consensus       163 ----------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~--------  205 (277)
T 3f3z_A          163 ----------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYP--------  205 (277)
T ss_dssp             ----------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCC--------
Confidence                                        012233688999999988764 6688999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                       ||.. .+..+....+..+...... ....+++.+.+||++||+.||++|||+.++|+||||++
T Consensus       206 -p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          206 -PFSA-PTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence             8876 5666666666666443222 22357889999999999999999999999999999986

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.1e-39  Score=310.88  Aligned_cols=250  Identities=22%  Similarity=0.297  Sum_probs=193.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+.. +..||+|.+.....  ...+.+.+|+.++++++|+||+++++++..+...++||||+++ +|.
T Consensus        29 lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~  106 (311)
T 3niz_A           29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLK  106 (311)
T ss_dssp             EEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHH
T ss_pred             ccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHH
Confidence            5889999999998754 66788888764432  2346788999999999999999999999999999999999965 888


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.+...  .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+.......           
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~a~~~~~~~-----------  173 (311)
T 3niz_A          107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFG--LARAFGIPV-----------  173 (311)
T ss_dssp             HHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEETTSCC-----------
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCc--CceecCCCc-----------
Confidence            777643  59999999999999999999999999999999999999999999999999  333111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (311)
T 3niz_A          174 --------------------------------------------------------------------------------  173 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......||+.|+|||++.+ ..+...+|+||+|+++|+|++|..       
T Consensus       174 ----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~-------  218 (311)
T 3niz_A          174 ----------------------------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP-------  218 (311)
T ss_dssp             ----------------------------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCC-------
Confidence                                        01223368899999999876 446688999999999999999986       


Q ss_pred             ccCcchhh--cHHHHHHHHHhCCCCC-cc-----------------------hhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         316 LIPYLFIL--SCRQALYLIATNKKPE-IK-----------------------EKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       316 ~~P~~~~~--~~~~~~~~i~~~~~~~-~~-----------------------~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                        ||....  ........+.....+. .+                       ....+++.+.+||++||+.||++|||++
T Consensus       219 --pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  296 (311)
T 3niz_A          219 --LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR  296 (311)
T ss_dssp             --SCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             --CCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHH
Confidence              776522  2222332222221110 00                       0123567899999999999999999999


Q ss_pred             HHhcCccccccCC
Q psy9736         370 LLLKHPFLKIARP  382 (400)
Q Consensus       370 ~~l~hp~~~~~~~  382 (400)
                      |+|+||||++..+
T Consensus       297 ell~hp~f~~~~~  309 (311)
T 3niz_A          297 DAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHTSGGGTTSCT
T ss_pred             HHhcCcccccCCc
Confidence            9999999997554

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=317.25  Aligned_cols=247  Identities=19%  Similarity=0.277  Sum_probs=195.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||+|+|+.|+++.+...+..||+|++....  ....+++.+|+.+++.++|+||+++++++..+.      .+|+||||+
T Consensus        33 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~  112 (367)
T 1cm8_A           33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM  112 (367)
T ss_dssp             C------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             eeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC
Confidence            699999999999998888999999885432  234567889999999999999999999997653      469999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+++....+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||  ++....    .     
T Consensus       113 -~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg--~a~~~~----~-----  180 (367)
T 1cm8_A          113 -GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG--LARQAD----S-----  180 (367)
T ss_dssp             -SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEECC----S-----
T ss_pred             -CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeee--cccccc----c-----
Confidence             8899999988889999999999999999999999999999999999999999999999999  333110    0     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (367)
T 1cm8_A          181 --------------------------------------------------------------------------------  180 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ......||+.|+|||++.+ ..+...+|+||+||++|||++|..   
T Consensus       181 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~---  224 (367)
T 1cm8_A          181 ---------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT---  224 (367)
T ss_dssp             ---------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC---
T ss_pred             ---------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCC---
Confidence                                             0123368899999999887 667788999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhC--CCC-------------------------Ccc-hhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATN--KKP-------------------------EIK-EKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~--~~~-------------------------~~~-~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+.+.  .++                         .+. ...+.++.+.+||++||+.||+
T Consensus       225 ------pf~~-~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~  297 (367)
T 1cm8_A          225 ------LFKG-SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE  297 (367)
T ss_dssp             ------SSCC-SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTT
T ss_pred             ------CCCC-CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChh
Confidence                  7766 4555555544321  110                         000 1124578899999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++++|+||||+....
T Consensus       298 ~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          298 QRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             TSCCHHHHHHSGGGTTTC-
T ss_pred             HCCCHHHHhcChHHHhhcC
Confidence            9999999999999997544

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2e-39  Score=309.95  Aligned_cols=251  Identities=22%  Similarity=0.284  Sum_probs=195.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+..... ...+.+.+|+.++++++|+||+++++++..++..++||||++ ++|.+
T Consensus        13 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~   91 (317)
T 2pmi_A           13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKK   91 (317)
T ss_dssp             ------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHH
T ss_pred             ECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHH
Confidence            6999999999999988888999998865432 234678899999999999999999999999999999999997 59988


Q ss_pred             HHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTET-------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~~-------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++...       .+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||  .+.......       
T Consensus        92 ~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~~~-------  162 (317)
T 2pmi_A           92 YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--LARAFGIPV-------  162 (317)
T ss_dssp             HHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCS--SCEETTSCC-------
T ss_pred             HHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCc--cceecCCCc-------
Confidence            88642       48999999999999999999999999999999999999999999999999  333110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (317)
T 2pmi_A          163 --------------------------------------------------------------------------------  162 (317)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                      .......||+.|+|||++.+. .+...+|+||+|+++|||++|..   
T Consensus       163 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~---  207 (317)
T 2pmi_A          163 --------------------------------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP---  207 (317)
T ss_dssp             --------------------------------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC---
T ss_pred             --------------------------------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCC---
Confidence                                            011233689999999998764 46688999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhC---CCCC----------------------c------chhhhhcHHHHHHHHHhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATN---KKPE----------------------I------KEKEKLSQIFQDFLDQCLEE  360 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~---~~~~----------------------~------~~~~~~s~~~~dli~~~L~~  360 (400)
                            ||.. .+..+.+..+...   ....                      +      .....++..+.+||++||+.
T Consensus       208 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  280 (317)
T 2pmi_A          208 ------LFPG-TNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQL  280 (317)
T ss_dssp             ------SCCC-SSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCS
T ss_pred             ------CCCC-CChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCC
Confidence                  8766 4444444444321   1000                      0      00124678899999999999


Q ss_pred             hhhhhhcHHHHhcCccccccCCC
Q psy9736         361 EVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       361 dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      ||++|||++|+|+||||++....
T Consensus       281 dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          281 NPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             SGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             CcccCCCHHHHhCChhhhcccch
Confidence            99999999999999999975443

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.2e-40  Score=327.38  Aligned_cols=250  Identities=18%  Similarity=0.233  Sum_probs=204.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|++|+++........||+|.+....   ....+.+.+|+.+++.++|+||++++++|.+++..|+||||+++++|
T Consensus        82 LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L  161 (437)
T 4aw2_A           82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDL  161 (437)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             EEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcH
Confidence            689999999999888777888888775321   11223478999999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  +.+++..++.++.|++.||.|||+.+|+||||||+||+++.+|.++|+|||  ++........         
T Consensus       162 ~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFG--la~~~~~~~~---------  230 (437)
T 4aw2_A          162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG--SCLKLMEDGT---------  230 (437)
T ss_dssp             HHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCTTSC---------
T ss_pred             HHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchh--hhhhcccCCC---------
Confidence            999975  479999999999999999999999999999999999999999999999999  4431111000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       231 --------------------------------------------------------------------------------  230 (437)
T 4aw2_A          231 --------------------------------------------------------------------------------  230 (437)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                   ......+||+.|+|||++.     ...++..+|.||+|+++|||++|..  
T Consensus       231 -----------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~--  279 (437)
T 4aw2_A          231 -----------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET--  279 (437)
T ss_dssp             -----------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSC--
T ss_pred             -----------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCC--
Confidence                                         0023357999999999987     4456688999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCC-CCCcc-hhhhhcHHHHHHHHHhhhhhhhh--hhcHHHHhcCcccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNK-KPEIK-EKEKLSQIFQDFLDQCLEEEVET--RASASLLLKHPFLKIA  380 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~-~~~~~-~~~~~s~~~~dli~~~L~~dP~~--R~s~~~~l~hp~~~~~  380 (400)
                             ||.. .+..+....|.... ...++ ...++++.+.+||++||..+|++  |++++|+++||||+..
T Consensus       280 -------Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          280 -------PFYA-ESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             -------TTCC-SSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             -------CCCC-CChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence                   8877 66777777775431 11111 12347889999999999999988  9999999999999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2.4e-39  Score=304.55  Aligned_cols=247  Identities=23%  Similarity=0.315  Sum_probs=199.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......|++|.+.... ....+.+.+|+.++++++|+||+++++++......++||||+++++|.+
T Consensus        30 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  109 (285)
T 3is5_A           30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLE  109 (285)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHH
T ss_pred             eccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHH
Confidence            589999999999888888888888876543 3346788999999999999999999999999999999999999999998


Q ss_pred             HHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          80 VVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        80 ~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+..     ..+++..++.++.|++.||.|||+.+++||||||+||++   +.++.++|+|||  .+.......      
T Consensus       110 ~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg--~a~~~~~~~------  181 (285)
T 3is5_A          110 RIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG--LAELFKSDE------  181 (285)
T ss_dssp             HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCC--CCCC-----------
T ss_pred             HHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeee--cceecCCcc------
Confidence            8853     469999999999999999999999999999999999999   456889999999  333111000      


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (285)
T 3is5_A          182 --------------------------------------------------------------------------------  181 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        ......||+.|+|||++.+ .+...+|.|++|+++|+|++|..   
T Consensus       182 ----------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~---  223 (285)
T 3is5_A          182 ----------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCL---  223 (285)
T ss_dssp             ---------------------------------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSC---
T ss_pred             ----------------------------------cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCC---
Confidence                                              0123368889999998764 46688999999999999999987   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                            ||.. .+..+....+....+........+++.+.+||++||+.||++|||++|+|+||||+++
T Consensus       224 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~a  285 (285)
T 3is5_A          224 ------PFTG-TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA  285 (285)
T ss_dssp             ------SSCC-SSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC-
T ss_pred             ------CCCC-CCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhcC
Confidence                  8876 5555555555554443333334478899999999999999999999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-39  Score=317.42  Aligned_cols=247  Identities=19%  Similarity=0.251  Sum_probs=197.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.|+++.+......||+|.+..... ..+.+.+|+.+++.++|+||+++++++.+....++||||+++++|.++
T Consensus        28 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (361)
T 3uc3_A           28 IGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER  106 (361)
T ss_dssp             ESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             eccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHH
Confidence            6899999999999988888999998865433 346688999999999999999999999999999999999999999998


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc--eEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS--VKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +.. +.+++..++.++.|++.||.|||++||+||||||+||+++.++.  ++|+|||  .+......             
T Consensus       107 l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg--~a~~~~~~-------------  171 (361)
T 3uc3_A          107 ICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG--YSKSSVLH-------------  171 (361)
T ss_dssp             HHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCC--CC-------------------
T ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecC--cccccccc-------------
Confidence            864 57999999999999999999999999999999999999987765  9999999  33210000             


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (361)
T 3uc3_A          172 --------------------------------------------------------------------------------  171 (361)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcc-cCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQT-TPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......||+.|+|||++.+..+... +|.||+|+++|+|++|..        
T Consensus       172 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~--------  216 (361)
T 3uc3_A          172 ---------------------------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAY--------  216 (361)
T ss_dssp             ------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ---------------------------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCC--------
Confidence                                       00123368999999999988877654 899999999999999987        


Q ss_pred             cCcchhhc---HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILS---CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~---~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.....   .......+... ...++....+++.+.+||++||+.||++|||++|+++||||...
T Consensus       217 -Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          217 -PFEDPEEPRDYRKTIQRILSV-KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             -SCC----CCCHHHHHHHHHTT-CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             -CCCCCccHHHHHHHHHHHhcC-CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence             8876322   23444444443 33344444578899999999999999999999999999999653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.8e-39  Score=308.20  Aligned_cols=245  Identities=22%  Similarity=0.324  Sum_probs=194.9

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEecccccc----CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLA----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||++...   .....||+|.+...    .....+.+.+|+.+++.++|+||+++++++..++..|+||||++
T Consensus        25 lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  104 (327)
T 3a62_A           25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLS  104 (327)
T ss_dssp             EEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCT
T ss_pred             EEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCC
Confidence            588989988876542   44556666665432    22334567899999999999999999999999999999999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+++.. +.+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+.......       
T Consensus       105 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg--~~~~~~~~~-------  175 (327)
T 3a62_A          105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG--LCKESIHDG-------  175 (327)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCS--CC--------------
T ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCC--cccccccCC-------
Confidence            9999999875 478999999999999999999999999999999999999999999999999  332110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       176 --------------------------------------------------------------------------------  175 (327)
T 3a62_A          176 --------------------------------------------------------------------------------  175 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......+||+.|+|||++.+..+...+|.|++|+++|+|++|..    
T Consensus       176 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~----  219 (327)
T 3a62_A          176 --------------------------------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP----  219 (327)
T ss_dssp             -----------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCC----
Confidence                                            01223478999999999998888889999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                           ||.. .+.......+.+.... +  +..++..+.+||.+||+.||++||     +++++++||||+.
T Consensus       220 -----pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          220 -----PFTG-ENRKKTIDKILKCKLN-L--PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             -----SCCC-SSHHHHHHHHHHTCCC-C--CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             -----CCCC-CCHHHHHHHHHhCCCC-C--CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence                 8876 5666667777766432 2  334788999999999999999999     8999999999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=3e-39  Score=307.04  Aligned_cols=260  Identities=22%  Similarity=0.271  Sum_probs=197.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+...+..||+|.+......  ..+.+.+|+.++++++|+||+++++++..++..++||||+++++|.
T Consensus        11 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   90 (311)
T 4agu_A           11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLH   90 (311)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred             EeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHH
Confidence            58999999999998888888999987544332  2466889999999999999999999999999999999999998998


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +++.. ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||  .+........           
T Consensus        91 ~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~-----------  157 (311)
T 4agu_A           91 ELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFG--FARLLTGPSD-----------  157 (311)
T ss_dssp             HHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECC---------------
T ss_pred             HHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCC--CchhccCccc-----------
Confidence            88874 469999999999999999999999999999999999999999999999999  3331110000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (311)
T 4agu_A          158 --------------------------------------------------------------------------------  157 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......||+.|+|||++.+ ..++..+|.||+|+++|+|++|..        
T Consensus       158 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~--------  201 (311)
T 4agu_A          158 ----------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP--------  201 (311)
T ss_dssp             ------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCC--------
Confidence                                        0123367889999999876 556688999999999999999976        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCC------------------Ccc----------hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         317 IPYLFILSCRQALYLIATNKKP------------------EIK----------EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~------------------~~~----------~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                       ||.. .+..+....+.+....                  .++          ...+++..+.+||++||+.||++|||+
T Consensus       202 -p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  279 (311)
T 4agu_A          202 -LWPG-KSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTC  279 (311)
T ss_dssp             -SCCC-SSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCH
T ss_pred             -CCCC-CCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCH
Confidence             7766 4444443333221000                  000          013467789999999999999999999


Q ss_pred             HHHhcCccccccCCCCCcchhhh
Q psy9736         369 SLLLKHPFLKIARPLASLTPLIM  391 (400)
Q Consensus       369 ~~~l~hp~~~~~~~~~~l~~~~~  391 (400)
                      +|+|+||||++.+....+...++
T Consensus       280 ~ell~hp~f~~~~~~~~~~~~~~  302 (311)
T 4agu_A          280 EQLLHHPYFENIREIEDLAKEHD  302 (311)
T ss_dssp             HHHHTSGGGTTCC----------
T ss_pred             HHHhcChHHHhccCHHHHHHhhc
Confidence            99999999998776555544433

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.5e-39  Score=313.52  Aligned_cols=255  Identities=21%  Similarity=0.255  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc-----CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA-----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.+......||+|.+...     .....+.+.+|+.++++++|+||+++++++..++..++||||++++
T Consensus        34 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg  113 (345)
T 3hko_A           34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGG  113 (345)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCC
Confidence            58999999999988888888888876532     2335578999999999999999999999999999999999999999


Q ss_pred             ChHHHHhh-----------------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Q psy9736          76 SLTDVVTE-----------------------------------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRD  114 (400)
Q Consensus        76 ~L~~~i~~-----------------------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~d  114 (400)
                      +|.+++..                                         ..+++..++.++.|++.||.|||+.+++|||
T Consensus       114 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D  193 (345)
T 3hko_A          114 HLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRD  193 (345)
T ss_dssp             BHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             cHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            99998851                                         1235778899999999999999999999999


Q ss_pred             CCCCceEecCCC--ceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCC
Q psy9736         115 IKSDNILLGLDG--SVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKH  192 (400)
Q Consensus       115 ikp~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~  192 (400)
                      |||+||+++.++  .++|+|||  .+..........                                            
T Consensus       194 lkp~NIll~~~~~~~~kl~Dfg--~a~~~~~~~~~~--------------------------------------------  227 (345)
T 3hko_A          194 IKPENFLFSTNKSFEIKLVDFG--LSKEFYKLNNGE--------------------------------------------  227 (345)
T ss_dssp             CCGGGEEESCSSSCCEEECCCT--TCEEGGGTTCC---------------------------------------------
T ss_pred             CChhhEEEecCCCceEEEeecc--ccccccccCccc--------------------------------------------
Confidence            999999998776  89999999  443221111000                                            


Q ss_pred             CchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCC
Q psy9736         193 PNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNG  272 (400)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  272 (400)
                                                                                             ........|
T Consensus       228 -----------------------------------------------------------------------~~~~~~~~g  236 (345)
T 3hko_A          228 -----------------------------------------------------------------------YYGMTTKAG  236 (345)
T ss_dssp             ------------------------------------------------------------------------------CC
T ss_pred             -----------------------------------------------------------------------cccccccCC
Confidence                                                                                   001223468


Q ss_pred             CCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHH
Q psy9736         273 ALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQI  349 (400)
Q Consensus       273 t~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~  349 (400)
                      |+.|+|||++.+  ..++..+|+||+|+++|||++|..         ||.. .+..+....+...... ..+....+++.
T Consensus       237 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~---------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (345)
T 3hko_A          237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV---------PFPG-VNDADTISQVLNKKLCFENPNYNVLSPL  306 (345)
T ss_dssp             CGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSC---------SSCC-SSHHHHHHHHHHCCCCTTSGGGGGSCHH
T ss_pred             CccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCC---------CCCC-CChHHHHHHHHhcccccCCcccccCCHH
Confidence            999999999875  556688999999999999999987         8877 5556666666665432 33334458899


Q ss_pred             HHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         350 FQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       350 ~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +.+||.+||+.||++|||+.++|+||||+....
T Consensus       307 ~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          307 ARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            999999999999999999999999999997543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.1e-39  Score=326.26  Aligned_cols=246  Identities=20%  Similarity=0.298  Sum_probs=199.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+...+..||+|.+...   .....+.+.+|+.+++.++|+||+++++++...+.+++||||+++++|
T Consensus       156 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L  235 (446)
T 4ejn_A          156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL  235 (446)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBH
T ss_pred             EeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcH
Confidence            68999999999988888888888887532   222345678899999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++.. +.+++..++.++.|++.||.|||+ .||+||||||+||+++.++.++|+|||  ++......           
T Consensus       236 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~-----------  302 (446)
T 4ejn_A          236 FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG--LCKEGIKD-----------  302 (446)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCC--CCCTTCC------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCC--CceeccCC-----------
Confidence            998875 479999999999999999999998 899999999999999999999999999  33311000           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       303 --------------------------------------------------------------------------------  302 (446)
T 4ejn_A          303 --------------------------------------------------------------------------------  302 (446)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..++..+|+||+|+++|||++|..       
T Consensus       303 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~-------  347 (446)
T 4ejn_A          303 ----------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL-------  347 (446)
T ss_dssp             --------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCC-------
Confidence                                        001234589999999999999888899999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+...... +  +..+++.+.+||.+||+.||++||     |++|+++||||+..
T Consensus       348 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          348 --PFYN-QDHEKLFELILMEEIR-F--PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             --CCCC-CCHHHHHHHHHhCCCC-C--CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence              8877 5666666666665432 2  345788999999999999999999     99999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=6.5e-39  Score=310.33  Aligned_cols=265  Identities=18%  Similarity=0.265  Sum_probs=206.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEe--------CCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV--------GEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--------~~~~~lv~e   70 (400)
                      ||+|+++.||++.+...+..||+|.+.....  .....+.+|+.+++.++|+||+++++++..        ++..++|||
T Consensus        25 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e  104 (351)
T 3mi9_A           25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD  104 (351)
T ss_dssp             CSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEE
T ss_pred             EecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEe
Confidence            6999999999999888888899998754432  224567899999999999999999999887        447899999


Q ss_pred             ccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          71 YLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        71 ~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      |+++ ++.+.+..  ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||  .+......... 
T Consensus       105 ~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~a~~~~~~~~~-  180 (351)
T 3mi9_A          105 FCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNS-  180 (351)
T ss_dssp             CCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCCCSSS-
T ss_pred             ccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccch--hcccccccccc-
Confidence            9965 77777764  369999999999999999999999999999999999999999999999999  44311111000 


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (351)
T 3mi9_A          181 --------------------------------------------------------------------------------  180 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                        .........||+.|+|||++.+. .+...+|+||+|+++|+|++|.
T Consensus       181 ----------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  226 (351)
T 3mi9_A          181 ----------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS  226 (351)
T ss_dssp             ----------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCC
Confidence                                              00113345789999999998764 4568899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhC---CCCCc-chh-------------------------hhhcHHHHHHHHHhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATN---KKPEI-KEK-------------------------EKLSQIFQDFLDQCL  358 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~---~~~~~-~~~-------------------------~~~s~~~~dli~~~L  358 (400)
                      .         ||.. .+....+..+...   .++.. +..                         ...++.+.+||.+||
T Consensus       227 ~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  296 (351)
T 3mi9_A          227 P---------IMQG-NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL  296 (351)
T ss_dssp             C---------SCCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHS
T ss_pred             C---------CCCC-CChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHh
Confidence            6         7765 4444444444321   11111 100                         012667999999999


Q ss_pred             hhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         359 EEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       359 ~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                      +.||++|||++|+|+||||+....++.+..+++..
T Consensus       297 ~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~  331 (351)
T 3mi9_A          297 VLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTH  331 (351)
T ss_dssp             CSSGGGSCCHHHHHTSGGGGSSSCCCCSHHHHHSS
T ss_pred             cCChhhCCCHHHHhCCCCcCCCCCccccccccCcc
Confidence            99999999999999999999988888877777643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=3.3e-39  Score=303.91  Aligned_cols=246  Identities=20%  Similarity=0.275  Sum_probs=193.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+ ..+..||+|.+......  ..+.+.+|+.++++++|+||+++++++..++..++||||+++ +|.
T Consensus        10 lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~   87 (288)
T 1ob3_A           10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLK   87 (288)
T ss_dssp             EEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHH
T ss_pred             cccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHH
Confidence            58999999999987 45667888887644322  236788999999999999999999999999999999999965 898


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..  +.+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+........          
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~----------  155 (288)
T 1ob3_A           88 KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG--LARAFGIPVR----------  155 (288)
T ss_dssp             HHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTT--HHHHHCC-------------
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECc--cccccCcccc----------
Confidence            88874  479999999999999999999999999999999999999999999999999  4432211100          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (288)
T 1ob3_A          156 --------------------------------------------------------------------------------  155 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......||+.|+|||++.+. .+...+|+||+|+++|+|++|..       
T Consensus       156 -----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~-------  199 (288)
T 1ob3_A          156 -----------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP-------  199 (288)
T ss_dssp             -----------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             -----------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCC-------
Confidence                                         01223678999999998764 46688999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhC--CC-----CCc-------------------chhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         316 LIPYLFILSCRQALYLIATN--KK-----PEI-------------------KEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~--~~-----~~~-------------------~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                        ||.. .+..+.+..+.+.  .+     +..                   .....+++.+.+||++||+.||++|||++
T Consensus       200 --pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  276 (288)
T 1ob3_A          200 --LFPG-VSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK  276 (288)
T ss_dssp             --SCCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             --CCCC-CCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence              7766 4444444444321  00     000                   00123678899999999999999999999


Q ss_pred             HHhcCccccc
Q psy9736         370 LLLKHPFLKI  379 (400)
Q Consensus       370 ~~l~hp~~~~  379 (400)
                      |+|+||||++
T Consensus       277 e~l~hp~f~~  286 (288)
T 1ob3_A          277 QALEHAYFKE  286 (288)
T ss_dssp             HHHTSGGGGC
T ss_pred             HHhcCcchhh
Confidence            9999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.8e-39  Score=324.90  Aligned_cols=245  Identities=17%  Similarity=0.226  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||+|+|+.|+++.+......||+|++...  .....+++.+|+.+++.++|+||+++++++...      ..+|+||||+
T Consensus        70 lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~  149 (464)
T 3ttj_A           70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM  149 (464)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECC
T ss_pred             eecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCC
Confidence            58999999999988888888999988643  333457788999999999999999999998654      4689999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++ ++.+.+.. .+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||  ++......        
T Consensus       150 ~~-~l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~--------  217 (464)
T 3ttj_A          150 DA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTS--------  217 (464)
T ss_dssp             SE-EHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCC--CC-----C--------
T ss_pred             CC-CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEE--eeeecCCC--------
Confidence            65 57666654 48999999999999999999999999999999999999999999999999  44311000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       218 --------------------------------------------------------------------------------  217 (464)
T 3ttj_A          218 --------------------------------------------------------------------------------  217 (464)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ......+||+.|+|||++.+..+....|+||+||++|||++|..    
T Consensus       218 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~----  261 (464)
T 3ttj_A          218 --------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----  261 (464)
T ss_dssp             --------------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCC----
Confidence                                            01233578999999999999988899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCC------------------------Ccchh---------------hhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKP------------------------EIKEK---------------EKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~------------------------~~~~~---------------~~~s~~~~dl  353 (400)
                           ||.. .+..+.+..|.+....                        ....+               ...++.+.+|
T Consensus       262 -----pF~g-~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  335 (464)
T 3ttj_A          262 -----LFPG-RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL  335 (464)
T ss_dssp             -----SSCC-SSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             -----CCCC-CCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHH
Confidence                 7766 5555555555432100                        00000               1125679999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |++||+.||++|||++|+|+||||+.
T Consensus       336 l~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          336 LSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHHcCCChhhCCCHHHHhcChhhhh
Confidence            99999999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.6e-39  Score=306.26  Aligned_cols=256  Identities=19%  Similarity=0.266  Sum_probs=196.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC----------------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE----------------   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----------------   63 (400)
                      ||+|+|+.||++.+...+..||+|.+.... ....+.+.+|+.++++++|+||++++++|....                
T Consensus        14 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (332)
T 3qd2_B           14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDE   93 (332)
T ss_dssp             EECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccc
Confidence            689999999999988888889999886543 335678999999999999999999999886532                


Q ss_pred             -----------------------------------------EEEEEEeccCCCChHHHHhhc----CCCHHHHHHHHHHH
Q psy9736          64 -----------------------------------------ELWVVMEYLPGGSLTDVVTET----CMDEGQIAAVCREV   98 (400)
Q Consensus        64 -----------------------------------------~~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~i~~qi   98 (400)
                                                               ..+++|||+++++|.+++...    ..++..++.++.|+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi  173 (332)
T 3qd2_B           94 STDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQI  173 (332)
T ss_dssp             --------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHH
T ss_pred             cccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHH
Confidence                                                     389999999999999999764    35667789999999


Q ss_pred             HHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchH
Q psy9736          99 LQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKE  178 (400)
Q Consensus        99 ~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~  178 (400)
                      +.||.|||+++++||||||+||+++.++.++|+|||  .+............                            
T Consensus       174 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG--~a~~~~~~~~~~~~----------------------------  223 (332)
T 3qd2_B          174 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG--LVTAMDQDEEEQTV----------------------------  223 (332)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEECSCC----------------------------------
T ss_pred             HHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC--cccccccchhhccc----------------------------
Confidence            999999999999999999999999999999999999  44422221111100                            


Q ss_pred             HHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCC
Q psy9736         179 LIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQ  258 (400)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (400)
                                                                                                     .
T Consensus       224 -------------------------------------------------------------------------------~  224 (332)
T 3qd2_B          224 -------------------------------------------------------------------------------L  224 (332)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             CCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCC
Q psy9736         259 PPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP  338 (400)
Q Consensus       259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~  338 (400)
                      .............||+.|+|||++.+..+...+|.||+|+++|||++|-.         |+..   .......+.....+
T Consensus       225 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~---------~~~~---~~~~~~~~~~~~~~  292 (332)
T 3qd2_B          225 TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS---------TQME---RVRIITDVRNLKFP  292 (332)
T ss_dssp             -------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCC---------CHHH---HHHHHHHHHTTCCC
T ss_pred             ccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCC---------ChhH---HHHHHHHhhccCCC
Confidence            00000112344579999999999999888899999999999999999853         4322   23333333333322


Q ss_pred             CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         339 EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       339 ~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      .  .....++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       293 ~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          293 L--LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             H--HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             c--ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            2  23456788999999999999999999999999999985

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.3e-40  Score=317.35  Aligned_cols=244  Identities=18%  Similarity=0.214  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+.....+||+|.+....   ....+.+.+|+.+++.++|+||+++++++.+....++||||+ +++|
T Consensus        17 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l   95 (336)
T 3h4j_B           17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGEL   95 (336)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcH
Confidence            589999999999988888889999875321   122356889999999999999999999999999999999999 6788


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||  ++......            
T Consensus        96 ~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG--~s~~~~~~------------  161 (336)
T 3h4j_B           96 FDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFG--LSNIMTDG------------  161 (336)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSS--CTBTTTTS------------
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEec--cceeccCC------------
Confidence            887754 579999999999999999999999999999999999999999999999999  33311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (336)
T 3h4j_B          162 --------------------------------------------------------------------------------  161 (336)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ......+||+.|+|||++.+..+ +..+|.||+|+++|+|++|..       
T Consensus       162 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~-------  206 (336)
T 3h4j_B          162 ----------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRL-------  206 (336)
T ss_dssp             ----------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCC-------
Confidence                                        01233479999999999998766 468999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                        ||... ........+..+   ....+..+++.+.+||++||+.||++|||++|+++||||+..
T Consensus       207 --Pf~~~-~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          207 --PFDDE-FIPNLFKKVNSC---VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             --SSBCS-SSTTCBCCCCSS---CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             --CCCCc-cHHHHHHHHHcC---CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence              88652 211111111111   112234578899999999999999999999999999999863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.3e-39  Score=324.56  Aligned_cols=247  Identities=20%  Similarity=0.299  Sum_probs=209.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+.+|+.++++++|+||+++++++...+..++|+||+.+++|
T Consensus        34 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L  113 (484)
T 3nyv_A           34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL  113 (484)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCH
Confidence            589999999999888888888888875332   33567899999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      .+.+.. +.+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||  ++.......        
T Consensus       114 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg--~a~~~~~~~--------  183 (484)
T 3nyv_A          114 FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG--LSTHFEASK--------  183 (484)
T ss_dssp             HHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTT--HHHHBCCCC--------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeee--eeEEccccc--------
Confidence            988865 479999999999999999999999999999999999999   467899999999  444221110        


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (484)
T 3nyv_A          184 --------------------------------------------------------------------------------  183 (484)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                      ......||+.|+|||++.+ .+...+|+||+|+++|+|++|..     
T Consensus       184 --------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~-----  225 (484)
T 3nyv_A          184 --------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCP-----  225 (484)
T ss_dssp             --------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             --------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCC-----
Confidence                                            0122368999999999876 57788999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                          ||.. .+..+.+..+.++.. ...+.+..+++.+.+||++||+.||++|||++++|+||||+..
T Consensus       226 ----pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          226 ----PFNG-ANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             ----SSCC-SSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence                8877 677777777777643 3445566789999999999999999999999999999999863

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=318.52  Aligned_cols=245  Identities=22%  Similarity=0.318  Sum_probs=201.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+....   ....+.+.+|+.+++.++|+||++++++|.+....++||||+.+++|
T Consensus        23 LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L  102 (384)
T 4fr4_A           23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL  102 (384)
T ss_dssp             EECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcH
Confidence            689999999999887777778888765321   22456788999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++... .+++..++.++.|++.||.|||+.||+||||||+||+++.+|.++|+|||  ++......            
T Consensus       103 ~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG--~a~~~~~~------------  168 (384)
T 4fr4_A          103 RYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFN--IAAMLPRE------------  168 (384)
T ss_dssp             HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCTT------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccc--eeeeccCC------------
Confidence            9999865 79999999999999999999999999999999999999999999999999  33311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (384)
T 4fr4_A          169 --------------------------------------------------------------------------------  168 (384)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  ....+.+||+.|+|||++..   ..++..+|.||+|+++|||++|..     
T Consensus       169 ----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~-----  215 (384)
T 4fr4_A          169 ----------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR-----  215 (384)
T ss_dssp             ----------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCC-----
Confidence                                        01234579999999999974   345678999999999999999987     


Q ss_pred             ccccCcchh--hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-HHHHhcCccccc
Q psy9736         314 HFLIPYLFI--LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-ASLLLKHPFLKI  379 (400)
Q Consensus       314 ~~~~P~~~~--~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-~~~~l~hp~~~~  379 (400)
                          ||...  .........+.... ...  +..++..+.+||.+||+.||++||+ ++++++||||+.
T Consensus       216 ----Pf~~~~~~~~~~~~~~~~~~~-~~~--p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          216 ----PYHIRSSTSSKEIVHTFETTV-VTY--PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             ----SSCCCTTSCHHHHHHHHHHCC-CCC--CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             ----CCCCCCCccHHHHHHHHhhcc-cCC--CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence                88642  23344444444432 222  3458899999999999999999998 999999999975

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=7.7e-39  Score=310.74  Aligned_cols=242  Identities=22%  Similarity=0.265  Sum_probs=195.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-----CCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-----HPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.+......||+|.+... ....+.+..|+.+++.+.     |+||+++++++...+..++||||+ ++
T Consensus        43 lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~  120 (360)
T 3llt_A           43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GP  120 (360)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CC
T ss_pred             EcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CC
Confidence            68999999999998888888999987632 234566788999999986     999999999999999999999999 88


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-------------------------CCc
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-------------------------DGS  127 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-------------------------~~~  127 (400)
                      +|.+++...   .+++..++.++.|++.||.|||+++|+||||||+||+++.                         ++.
T Consensus       121 ~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (360)
T 3llt_A          121 SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG  200 (360)
T ss_dssp             BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCC
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCC
Confidence            999999764   4899999999999999999999999999999999999975                         677


Q ss_pred             eEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccc
Q psy9736         128 VKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEE  207 (400)
Q Consensus       128 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (400)
                      ++|+|||  ++...    .                                                             
T Consensus       201 ~kl~DFG--~a~~~----~-------------------------------------------------------------  213 (360)
T 3llt_A          201 IKLIDFG--CATFK----S-------------------------------------------------------------  213 (360)
T ss_dssp             EEECCCT--TCEET----T-------------------------------------------------------------
T ss_pred             EEEEecc--Cceec----C-------------------------------------------------------------
Confidence            8888888  33210    0                                                             


Q ss_pred             cceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC
Q psy9736         208 LWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK  287 (400)
Q Consensus       208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  287 (400)
                                                                               .......||+.|+|||++.+..+
T Consensus       214 ---------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~  236 (360)
T 3llt_A          214 ---------------------------------------------------------DYHGSIINTRQYRAPEVILNLGW  236 (360)
T ss_dssp             ---------------------------------------------------------SCCCSCCSCGGGCCHHHHTTCCC
T ss_pred             ---------------------------------------------------------CCCcCccCcccccCcHHHcCCCC
Confidence                                                                     01223468999999999999888


Q ss_pred             CcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-------------------------
Q psy9736         288 NQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-------------------------  342 (400)
Q Consensus       288 ~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-------------------------  342 (400)
                      +..+|+||+|+++|+|++|..         ||.. .+..+.+..+.....+....                         
T Consensus       237 ~~~~DiwslG~il~ell~g~~---------pf~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~  306 (360)
T 3llt_A          237 DVSSDMWSFGCVLAELYTGSL---------LFRT-HEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE  306 (360)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSC---------SCCC-SSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTT
T ss_pred             CCccchHHHHHHHHHHHHCCC---------CCCC-CcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcc
Confidence            899999999999999999987         8866 44444444433221111000                         


Q ss_pred             ------------------hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         343 ------------------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       343 ------------------~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                                        ....++.+.+||++||+.||++|||++|+|+||||+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          307 NASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                              001236788999999999999999999999999996

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=321.66  Aligned_cols=249  Identities=20%  Similarity=0.206  Sum_probs=201.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++........||+|.+....   ....+.+.+|+.++..++|+||++++++|.+++..|+||||+++++|
T Consensus        69 lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L  148 (412)
T 2vd5_A           69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL  148 (412)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcH
Confidence            689999999999888777888888875321   11234478999999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.||.|||+.+|+||||||+||+++.+|.++|+|||  ++........         
T Consensus       149 ~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFG--la~~~~~~~~---------  217 (412)
T 2vd5_A          149 LTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGT---------  217 (412)
T ss_dssp             HHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECCTTSC---------
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeech--hheeccCCCc---------
Confidence            999975  369999999999999999999999999999999999999999999999999  4331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       218 --------------------------------------------------------------------------------  217 (412)
T 2vd5_A          218 --------------------------------------------------------------------------------  217 (412)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-------CCCCcccCCCCccchhhhhcCCCC
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-------KNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                   ......+||+.|+|||++..       ..++..+|.||+|+++|||++|..
T Consensus       218 -----------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~  268 (412)
T 2vd5_A          218 -----------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQT  268 (412)
T ss_dssp             -----------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence                                         00234579999999999873       456688999999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCC-CCCcc-hhhhhcHHHHHHHHHhhhhhhhhh---hcHHHHhcCcccccc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNK-KPEIK-EKEKLSQIFQDFLDQCLEEEVETR---ASASLLLKHPFLKIA  380 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~-~~~~~-~~~~~s~~~~dli~~~L~~dP~~R---~s~~~~l~hp~~~~~  380 (400)
                               ||.. .+..+....|.... ...++ .+..+++.+.+||++||. +|++|   ++++|+++||||+..
T Consensus       269 ---------Pf~~-~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          269 ---------PFYA-DSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             ---------TTCC-SSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ---------CCCC-CCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence                     8877 66666666666431 11111 134588999999999999 99998   599999999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=9.3e-39  Score=305.61  Aligned_cols=249  Identities=18%  Similarity=0.255  Sum_probs=206.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.|+++.+......||+|.+.....      ...+.+.+|+.++++++|+||+++++++..+...++||||+++
T Consensus        20 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   99 (321)
T 2a2a_A           20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSG   99 (321)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCC
Confidence            5899999999998877777788887754322      1367799999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++    .++|+|||  .+.....    . 
T Consensus       100 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg--~~~~~~~----~-  172 (321)
T 2a2a_A          100 GELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG--LAHEIED----G-  172 (321)
T ss_dssp             CBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCT--TCEECCT----T-
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCc--cceecCc----c-
Confidence            9999999754 689999999999999999999999999999999999999887    79999999  3321100    0 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (321)
T 2a2a_A          173 --------------------------------------------------------------------------------  172 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         .......||+.|+|||++.+..+...+|.||+|+++|+|++|.. 
T Consensus       173 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-  216 (321)
T 2a2a_A          173 -----------------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-  216 (321)
T ss_dssp             -----------------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC-
T ss_pred             -----------------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCC-
Confidence                                               00123368999999999998888889999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                              ||.. .+..+.+..+......... .+..++..+.+||++||+.||++|||++++++||||+...
T Consensus       217 --------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          217 --------PFLG-DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             --------SSCC-SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             --------CCCC-CCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence                    8876 5666666666655432221 1245788999999999999999999999999999998654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1e-38  Score=322.71  Aligned_cols=249  Identities=19%  Similarity=0.308  Sum_probs=208.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+......||+|.+...  .....+.+.+|+.++++++|+||+++++++.....+++|+||+.+++|.
T Consensus        30 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~  109 (486)
T 3mwu_A           30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF  109 (486)
T ss_dssp             EECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHH
Confidence            68999999999988877788888887532  2234577899999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec---CCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG---LDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.. ..+++..+..++.|++.||.|||+++|+||||||+||+++   .++.++|+|||  ++......          
T Consensus       110 ~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg--~a~~~~~~----------  177 (486)
T 3mwu_A          110 DEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG--LSTCFQQN----------  177 (486)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCS--CTTTBCCC----------
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECC--cCeECCCC----------
Confidence            88764 5799999999999999999999999999999999999995   45679999999  43311100          


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (486)
T 3mwu_A          178 --------------------------------------------------------------------------------  177 (486)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+. +...+|+||+|+++|+|++|..      
T Consensus       178 ------------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~------  220 (486)
T 3mwu_A          178 ------------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTP------  220 (486)
T ss_dssp             ----------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------CccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCC------
Confidence                                          012234789999999998764 7788999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                         ||.. .+..+.+..+..+.. ...+.+..+|+.+.+||++||+.||++|||+.++|+||||+....
T Consensus       221 ---pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          221 ---PFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             ---SSCC-SSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             ---CCCC-CCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence               8877 677777777777643 344556678999999999999999999999999999999997544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=7.8e-39  Score=300.08  Aligned_cols=251  Identities=18%  Similarity=0.235  Sum_probs=206.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||.+.+......|++|.+....  ....+.+.+|+.++++++|+||+++++++..++..+++|||+++++|.
T Consensus        14 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   93 (284)
T 3kk8_A           14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF   93 (284)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             hcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHH
Confidence            589999999999887777888888876443  223467889999999999999999999999999999999999999998


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc---eEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.   ++|+|||  .+.....    .      
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg--~~~~~~~----~------  161 (284)
T 3kk8_A           94 EDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG--LAIEVND----S------  161 (284)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCT--TCEECCS----S------
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeece--eeEEccc----C------
Confidence            87764 46999999999999999999999999999999999999987655   9999999  3321100    0      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (284)
T 3kk8_A          162 --------------------------------------------------------------------------------  161 (284)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    .......||+.|+|||++.+..+...+|.|++|+++|+|++|..      
T Consensus       162 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~------  205 (284)
T 3kk8_A          162 ------------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP------  205 (284)
T ss_dssp             ------------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCC------
Confidence                                          00123468899999999998888889999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                         ||.. .+.......+..+... ..+....+++.+.+||++||+.||++|||++|+|+||||++....
T Consensus       206 ---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          206 ---PFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             ---SSCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             ---CCCC-CchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence               8877 5566666666555332 222334678899999999999999999999999999999975543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.7e-39  Score=308.96  Aligned_cols=248  Identities=20%  Similarity=0.232  Sum_probs=192.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc--hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP--KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+......||+|.+......  ..+.+.+|+.++++++|+||+++++++..+...++||||++ ++|.
T Consensus        42 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~  120 (329)
T 3gbz_A           42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLK  120 (329)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred             EEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHH
Confidence            58999999999988888889999988654322  24567899999999999999999999999999999999996 4999


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec-----CCCceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-----LDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++... .+++..++.++.|++.||.|||+.+|+||||||+||+++     ..+.++|+|||  .+........      
T Consensus       121 ~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg--~a~~~~~~~~------  192 (329)
T 3gbz_A          121 KYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG--LARAFGIPIR------  192 (329)
T ss_dssp             HHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTT--HHHHHC----------
T ss_pred             HHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCC--CccccCCccc------
Confidence            988754 799999999999999999999999999999999999994     45569999999  4442211110      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (329)
T 3gbz_A          193 --------------------------------------------------------------------------------  192 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ......||+.|+|||++.+.. +...+|+||+|+++|||++|..   
T Consensus       193 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~---  236 (329)
T 3gbz_A          193 ---------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP---  236 (329)
T ss_dssp             ----------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC---
T ss_pred             ---------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCC---
Confidence                                             012236788999999998744 6688999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhC--CCCC--cc-----------------------hhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATN--KKPE--IK-----------------------EKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~--~~~~--~~-----------------------~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                            ||.. .+..+.+..+...  .++.  .+                       .+..+++.+.+||++||+.||++
T Consensus       237 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  309 (329)
T 3gbz_A          237 ------LFPG-DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVK  309 (329)
T ss_dssp             ------SSCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGG
T ss_pred             ------CcCC-CCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhh
Confidence                  7766 5555555555432  1000  00                       01126788999999999999999


Q ss_pred             hhcHHHHhcCcccccc
Q psy9736         365 RASASLLLKHPFLKIA  380 (400)
Q Consensus       365 R~s~~~~l~hp~~~~~  380 (400)
                      |||++|+|+||||+..
T Consensus       310 R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          310 RISAKNALEHPYFSHN  325 (329)
T ss_dssp             SCCHHHHHTSGGGSSS
T ss_pred             CCCHHHHhCCcccCCC
Confidence            9999999999999964

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=6.2e-39  Score=299.34  Aligned_cols=255  Identities=18%  Similarity=0.215  Sum_probs=204.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|.++.||.+.+......|++|.+.... ....+.+.+|+.+++.++|+||+++++++..++..++++||+++++|.+
T Consensus        15 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   94 (276)
T 2yex_A           15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD   94 (276)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGG
T ss_pred             eecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHH
Confidence            588999999999887777888888876443 2345778999999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      ++... .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+.........           
T Consensus        95 ~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg--~~~~~~~~~~~-----------  161 (276)
T 2yex_A           95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG--LATVFRYNNRE-----------  161 (276)
T ss_dssp             GSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECEETTEE-----------
T ss_pred             HHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCC--CccccCCCcch-----------
Confidence            98754 69999999999999999999999999999999999999999999999999  33311110000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (276)
T 2yex_A          162 --------------------------------------------------------------------------------  161 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                .......||+.|+|||++.+..+ ...+|.|++|+++|+|++|..         
T Consensus       162 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~---------  206 (276)
T 2yex_A          162 --------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL---------  206 (276)
T ss_dssp             --------------------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSC---------
T ss_pred             --------------------------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCC---------
Confidence                                      00223468899999999987665 367999999999999999987         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                      ||............+... ......+..++..+.+||.+||+.||++|||++|+++||||+.....+
T Consensus       207 p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~  272 (276)
T 2yex_A          207 PWDQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG  272 (276)
T ss_dssp             CCSCSCTTSHHHHHHHTT-CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC--
T ss_pred             CCCCCchHHHHHHHhhhc-ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhhcc
Confidence            886633332333333332 333344556889999999999999999999999999999999765443

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.9e-39  Score=314.97  Aligned_cols=245  Identities=21%  Similarity=0.307  Sum_probs=197.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHH-HHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILV-MRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.|+++++......||+|.+....   ....+.+.+|..+ ++.++|+||++++++|.+.+..|+||||+++++
T Consensus        46 lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~  125 (373)
T 2r5t_A           46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGE  125 (373)
T ss_dssp             EECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             EeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCc
Confidence            689999999999877777777777765332   2233456677776 466899999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++......           
T Consensus       126 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG--~a~~~~~~-----------  192 (373)
T 2r5t_A          126 LFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG--LCKENIEH-----------  192 (373)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCC--BCGGGBCC-----------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCc--cccccccC-----------
Confidence            9998875 479999999999999999999999999999999999999999999999999  33311000           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (373)
T 2r5t_A          193 --------------------------------------------------------------------------------  192 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..+...+|.||+|+++|||++|..       
T Consensus       193 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~-------  237 (373)
T 2r5t_A          193 ----------------------------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP-------  237 (373)
T ss_dssp             ----------------------------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCC-------
Confidence                                        001345589999999999999888899999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~hp~~~~  379 (400)
                        ||.. .+..+....|...... +  +..++..+.+||++||+.||++|+++    +++++||||+.
T Consensus       238 --Pf~~-~~~~~~~~~i~~~~~~-~--~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          238 --PFYS-RNTAEMYDNILNKPLQ-L--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             --TTCC-SBHHHHHHHHHHSCCC-C--CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             --CCCC-CCHHHHHHHHHhcccC-C--CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence              8877 6777777777776432 2  33578899999999999999999997    69999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=9.8e-39  Score=303.43  Aligned_cols=248  Identities=20%  Similarity=0.245  Sum_probs=195.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-----chHHHHHHHHHHHHhC---CCCCcccccceeEeCC-----EEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-----PKKELIINEILVMREN---KHPNIVNYLDSYLVGE-----ELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-----~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~~~-----~~~l   67 (400)
                      ||+|+|+.||++.+......||+|.+.....     .....+.+|+.+++.+   +|+||+++++++....     ..++
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~l   96 (308)
T 3g33_A           17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTL   96 (308)
T ss_dssp             ECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEE
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEE
Confidence            6899999999999888888899998764321     1234567888888776   4999999999998754     6899


Q ss_pred             EEeccCCCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          68 VMEYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        68 v~e~~~~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      ++||+. ++|.+++...   .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+......
T Consensus        97 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg--~a~~~~~~  173 (308)
T 3g33_A           97 VFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG--LARIYSYQ  173 (308)
T ss_dssp             EEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCS--CTTTSTTC
T ss_pred             Eehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCc--cccccCCC
Confidence            999996 5999988754   38999999999999999999999999999999999999999999999999  33311000


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (308)
T 3g33_A          174 --------------------------------------------------------------------------------  173 (308)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhc
Q psy9736         225 WYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                              .......||+.|+|||++.+..+...+|+||+|+++|+|+
T Consensus       174 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  213 (308)
T 3g33_A          174 ----------------------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF  213 (308)
T ss_dssp             ----------------------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT
T ss_pred             ----------------------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH
Confidence                                                    0123347899999999999988889999999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhC--CCCC--c--------------------chhhhhcHHHHHHHHHhhhh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATN--KKPE--I--------------------KEKEKLSQIFQDFLDQCLEE  360 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~--~~~~--~--------------------~~~~~~s~~~~dli~~~L~~  360 (400)
                      +|..         ||.. .+....+..+...  .++.  .                    .....+++.+.+||.+||+.
T Consensus       214 ~g~~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  283 (308)
T 3g33_A          214 RRKP---------LFCG-NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTF  283 (308)
T ss_dssp             TSSC---------SCCC-SSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCS
T ss_pred             hCCC---------CCCC-CCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcC
Confidence            9986         7766 5555555555432  0000  0                    00124678899999999999


Q ss_pred             hhhhhhcHHHHhcCccccccC
Q psy9736         361 EVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       361 dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ||++|||++|+|+||||+...
T Consensus       284 dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          284 NPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             STTTSCCHHHHHTSTTC----
T ss_pred             CCccCCCHHHHhcCccccCCC
Confidence            999999999999999999743

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=7.4e-39  Score=312.45  Aligned_cols=247  Identities=18%  Similarity=0.265  Sum_probs=186.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+...+..||+|++....  ....+++.+|+.+++.++|+||+++++++...      ...++++||+
T Consensus        37 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~  116 (367)
T 2fst_X           37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  116 (367)
T ss_dssp             CC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred             EeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc
Confidence            699999999999988888999999986432  23456788999999999999999999998653      4689999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +++|.+++..+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||  ++......        
T Consensus       117 -~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG--~a~~~~~~--------  185 (367)
T 2fst_X          117 -GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHTADE--------  185 (367)
T ss_dssp             -CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------------------
T ss_pred             -CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecc--cccccccc--------
Confidence             7899999988889999999999999999999999999999999999999999999999999  44311000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (367)
T 2fst_X          186 --------------------------------------------------------------------------------  185 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        .....||+.|+|||++.+ ..+...+|+||+||++|||++|..   
T Consensus       186 ----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~---  228 (367)
T 2fst_X          186 ----------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT---  228 (367)
T ss_dssp             ---------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSC---
T ss_pred             ----------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCC---
Confidence                                              122368889999999887 566688999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhC--CC-----------------------CCcch---hhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATN--KK-----------------------PEIKE---KEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~--~~-----------------------~~~~~---~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+.+.  .+                       +....   ....++.+.+||++||+.||+
T Consensus       229 ------pf~~-~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~  301 (367)
T 2fst_X          229 ------LFPG-TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD  301 (367)
T ss_dssp             ------SCCC-SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGG
T ss_pred             ------CCCC-CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcc
Confidence                  7766 4555554444331  00                       00000   123567899999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++++|+||||+....
T Consensus       302 ~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          302 KRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             GSCCHHHHHTSGGGTTTCC
T ss_pred             cCcCHHHHhcChhhhhccC
Confidence            9999999999999997433

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.4e-38  Score=301.75  Aligned_cols=249  Identities=22%  Similarity=0.275  Sum_probs=206.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|.++.||.+.+...+..|++|.+........+.+.+|+.+++.++|+||+++++++..++..+++|||+++++|.++
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (304)
T 2jam_A           17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR   96 (304)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             ccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHH
Confidence            58999999999998888888999988755444556788999999999999999999999999999999999999999998


Q ss_pred             Hhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +.. +.+++..+..++.|++.||.|||+.+++|+||||+||++   +.++.++|+|||  .+......            
T Consensus        97 l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg--~~~~~~~~------------  162 (304)
T 2jam_A           97 ILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG--LSKMEQNG------------  162 (304)
T ss_dssp             HHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCS--TTCCCCCB------------
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCC--cceecCCC------------
Confidence            864 478999999999999999999999999999999999999   778999999999  33210000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (304)
T 2jam_A          163 --------------------------------------------------------------------------------  162 (304)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       163 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  205 (304)
T 2jam_A          163 -----------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP--------  205 (304)
T ss_dssp             -----------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCC--------
Confidence                                         0122358889999999998888889999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                       ||.. .+.......+..+.... .+.+..++..+.+||.+||+.||++|||++++++||||+...+
T Consensus       206 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          206 -PFYE-ETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             -TTTT-SCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence             8876 55566666666654322 1223457889999999999999999999999999999997554

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.3e-38  Score=297.02  Aligned_cols=245  Identities=22%  Similarity=0.357  Sum_probs=201.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.+......|++|.+....  ....+.+.+|+.++++++|+||+++++++..    +...++||||+++
T Consensus        34 lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  113 (290)
T 1t4h_A           34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCS
T ss_pred             ccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCC
Confidence            589999999999888888888888876432  2345778999999999999999999998875    3568999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEec-CCCceEEeccchhhhhhhccccchhhc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      ++|.+++.. ..+++..++.++.|++.||.|||+.+  ++|+||||+||+++ .++.++|+|||  .+......      
T Consensus       114 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg--~~~~~~~~------  185 (290)
T 1t4h_A          114 GTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG--LATLKRAS------  185 (290)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTT--GGGGCCTT------
T ss_pred             CCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCC--Cccccccc------
Confidence            999999986 57999999999999999999999998  99999999999997 78999999999  33210000      


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (290)
T 1t4h_A          186 --------------------------------------------------------------------------------  185 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                         ......||+.|+|||++.+ .+...+|.||+|+++|+|++|..  
T Consensus       186 -----------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~--  227 (290)
T 1t4h_A          186 -----------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY--  227 (290)
T ss_dssp             -----------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC--
T ss_pred             -----------------------------------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCC--
Confidence                                               0122368899999998875 46788999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                             ||....+.......+..+..+ ...+...++.+.+||.+||+.||++|||++++++||||++
T Consensus       228 -------pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          228 -------PYSECQNAAQIYRRVTSGVKP-ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -------TTTTCSSHHHHHHHHTTTCCC-GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -------CCCCcCcHHHHHHHHhccCCc-cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                   888755556665555555333 2334456788999999999999999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.6e-39  Score=324.53  Aligned_cols=245  Identities=18%  Similarity=0.219  Sum_probs=205.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+..++.+||+|.+....   ....+.+.+|+.+++.++|+||+++++++.+.+..++||||+++++|
T Consensus        24 LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L  103 (476)
T 2y94_A           24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL  103 (476)
T ss_dssp             EECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence            589999999999888888888999875332   12346789999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+.....    .        
T Consensus       104 ~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG--~a~~~~~----~--------  169 (476)
T 2y94_A          104 FDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG--LSNMMSD----G--------  169 (476)
T ss_dssp             HHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCS--SCEECCT----T--------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEecc--chhhccc----c--------
Confidence            9999754 79999999999999999999999999999999999999999999999999  3321100    0        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (476)
T 2y94_A          170 --------------------------------------------------------------------------------  169 (476)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ....+.+||+.|+|||++.+..+ +..+|.||+|+++|+|++|..       
T Consensus       170 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~-------  214 (476)
T 2y94_A          170 ----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL-------  214 (476)
T ss_dssp             ----------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCC-------
Confidence                                        01233479999999999988765 468999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                        ||.. .+.......+..+...   .+..+++.+.+||++||+.||++|||++++++||||+..
T Consensus       215 --Pf~~-~~~~~~~~~i~~~~~~---~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          215 --PFDD-DHVPTLFKKICDGIFY---TPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             --SSCC-SSSHHHHHHHHTTCCC---CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             --CCCC-CCHHHHHHHHhcCCcC---CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence              8876 5555566666665332   234578899999999999999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.2e-38  Score=322.95  Aligned_cols=246  Identities=20%  Similarity=0.313  Sum_probs=202.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+......||+|.+....  ....+.+.+|+.+++.++|+||+++++++.....+++||||+++++|.
T Consensus        45 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~  124 (494)
T 3lij_A           45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF  124 (494)
T ss_dssp             EECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             EecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHH
Confidence            689999999999888888888888876432  223567899999999999999999999999999999999999999999


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.. ..+++..+..++.|++.||.|||+++|+||||||+||+++..   +.++|+|||  ++.....    .      
T Consensus       125 ~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG--~a~~~~~----~------  192 (494)
T 3lij_A          125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFG--LSAVFEN----Q------  192 (494)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT--TCEECBT----T------
T ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECC--CCeECCC----C------
Confidence            88764 479999999999999999999999999999999999999764   559999999  3331110    0      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       193 --------------------------------------------------------------------------------  192 (494)
T 3lij_A          193 --------------------------------------------------------------------------------  192 (494)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......+||+.|+|||++.+ .+...+|+||+|+++|+|++|..      
T Consensus       193 ------------------------------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~------  235 (494)
T 3lij_A          193 ------------------------------KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYP------  235 (494)
T ss_dssp             ------------------------------BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCC------
Confidence                                          01223478999999998864 57788999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||.. .+..+.+..+..+... ..+.+..+++.+.+||++||+.||++|||++++|+||||+.
T Consensus       236 ---pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          236 ---PFGG-QTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             ---SSCC-SSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence               8876 6677777777776443 23334568999999999999999999999999999999986

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-38  Score=320.11  Aligned_cols=287  Identities=18%  Similarity=0.177  Sum_probs=185.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~   73 (400)
                      ||+|+|+.|+++.+......||+|++...  .....+++.+|+.+++.++|+||+++++++...     ..+|+||||+ 
T Consensus        61 lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-  139 (458)
T 3rp9_A           61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-  139 (458)
T ss_dssp             -------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-
T ss_pred             eeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-
Confidence            69999999999988888888999987543  233457789999999999999999999998533     5799999999 


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+++... .+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||  ++..........    
T Consensus       140 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFG--la~~~~~~~~~~----  213 (458)
T 3rp9_A          140 DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFG--LARTVDYPENGN----  213 (458)
T ss_dssp             SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT--TCBCTTSCTTCC----
T ss_pred             ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccc--cchhccCccccc----
Confidence            56899888764 69999999999999999999999999999999999999999999999999  554222111110    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                              ......|.                                    ..                          
T Consensus       214 --------~~~~~~~~------------------------------------~~--------------------------  223 (458)
T 3rp9_A          214 --------SQLPISPR------------------------------------ED--------------------------  223 (458)
T ss_dssp             --------CCCC--------------------------------------------------------------------
T ss_pred             --------cccccCcc------------------------------------cc--------------------------
Confidence                    00000000                                    00                          


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-cCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-DKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                     .....+++..   ..........+||+.|+|||++. ...++..+|+||+||++|||++|-.-.+
T Consensus       224 ---------------~~~~~~~~~~---~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          224 ---------------DMNLVTFPHT---KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             ---------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             ---------------cccccccccc---ccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence                           0000000000   00011244568999999999874 5557788999999999999998522111


Q ss_pred             cccc--ccCcchhh-------------------cHHHHHHHH---HhCCC------------------------CC-cch
Q psy9736         312 QPHF--LIPYLFIL-------------------SCRQALYLI---ATNKK------------------------PE-IKE  342 (400)
Q Consensus       312 g~~~--~~P~~~~~-------------------~~~~~~~~i---~~~~~------------------------~~-~~~  342 (400)
                      ....  .++|.+..                   .....+..|   +....                        .. ...
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER  365 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence            1110  11222210                   112222222   11110                        00 001


Q ss_pred             hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         343 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       343 ~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ....++.+.+||++||+.||++|||++|+|+||||+..+.
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence            1235789999999999999999999999999999997543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=8.4e-39  Score=299.45  Aligned_cols=246  Identities=21%  Similarity=0.353  Sum_probs=203.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+......|++|.+....   ....+.+.+|+.+++.++|+||+++++++...+..+++|||+++++|
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   96 (279)
T 3fdn_A           17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV   96 (279)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             EecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcH
Confidence            589999999999888888888888774322   12346688999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+.+.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+...    ...        
T Consensus        97 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg--~~~~~----~~~--------  162 (279)
T 3fdn_A           97 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHA----PSS--------  162 (279)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCC--EESCC---------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEecc--ccccC----Ccc--------
Confidence            998875 479999999999999999999999999999999999999999999999999  32200    000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       163 --------------------------------------------------------------------------------  162 (279)
T 3fdn_A          163 --------------------------------------------------------------------------------  162 (279)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       163 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  205 (279)
T 3fdn_A          163 -----------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--------  205 (279)
T ss_dssp             ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCC--------
Confidence                                         0122368889999999988888889999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                       ||.. .+..+....+...... +  +..++..+.+||.+||+.||++|||++|+++||||+....
T Consensus       206 -p~~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          206 -PFEA-NTYQETYKRISRVEFT-F--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             -TTCC-SSHHHHHHHHHHTCCC-C--CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             -CCCC-CcHHHHHHHHHhCCCC-C--CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence             8766 5555566666554332 2  3347889999999999999999999999999999997544

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=2.2e-38  Score=315.63  Aligned_cols=282  Identities=20%  Similarity=0.244  Sum_probs=197.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+......||+|++...  .....+++.+|+.+++.++|+||+++++++...     ...|+||||+.
T Consensus        34 lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~  113 (432)
T 3n9x_A           34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD  113 (432)
T ss_dssp             EEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS
T ss_pred             EeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC
Confidence            68999999999999888899999988643  233457789999999999999999999998766     57999999995


Q ss_pred             CCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       ++|.+++... .+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||  ++............. 
T Consensus       114 -~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFG--la~~~~~~~~~~~~~-  189 (432)
T 3n9x_A          114 -SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFG--LARTINSEKDTNIVN-  189 (432)
T ss_dssp             -EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEEC-----------
T ss_pred             -cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCC--Ccccccccccccccc-
Confidence             5999998865 69999999999999999999999999999999999999999999999999  544222111110000 


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                   ..+.  +..                                               ..         
T Consensus       190 -------------~~~~--~~~-----------------------------------------------~~---------  198 (432)
T 3n9x_A          190 -------------DLEE--NEE-----------------------------------------------PG---------  198 (432)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -------------cccc--ccc-----------------------------------------------cc---------
Confidence                         0000  000                                               00         


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce-ecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV-LDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                               .............+||+.|+|||++ ....++..+|+||+||++|||++|...-.
T Consensus       199 -------------------------~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          199 -------------------------PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             -------------------------ccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                                     0000001124566899999999986 45557788999999999999998743111


Q ss_pred             cc-ccccCcchhhc-----------------HHHHHHHHHh--CCC---------------------CC--cc---hhhh
Q psy9736         312 QP-HFLIPYLFILS-----------------CRQALYLIAT--NKK---------------------PE--IK---EKEK  345 (400)
Q Consensus       312 g~-~~~~P~~~~~~-----------------~~~~~~~i~~--~~~---------------------~~--~~---~~~~  345 (400)
                      +. .-..|++.+.+                 ....+..|..  +.+                     ..  .+   ....
T Consensus       254 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (432)
T 3n9x_A          254 NDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS  333 (432)
T ss_dssp             SSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTT
T ss_pred             cccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCC
Confidence            11 11223322111                 1222222211  100                     00  00   0134


Q ss_pred             hcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         346 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       346 ~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +++.+.+||++||+.||++|||++|+|+||||+..+.
T Consensus       334 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence            7889999999999999999999999999999997544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.1e-38  Score=314.75  Aligned_cols=245  Identities=18%  Similarity=0.231  Sum_probs=193.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh-CCCCCcccccceeEe----CCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLV----GEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++.+..+...||+|.+..     ...+.+|+.++.+ .+|+||++++++|..    +..+|+||||++++
T Consensus        70 LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg  144 (400)
T 1nxk_A           70 LGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  144 (400)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence            5899999999999988889999998742     2446789998755 589999999999876    56789999999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhh
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      +|.+++...   .+++..++.++.|++.||.|||+.+|+||||||+||+++.   ++.++|+|||  ++.....    . 
T Consensus       145 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG--~a~~~~~----~-  217 (400)
T 1nxk_A          145 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG--FAKETTS----H-  217 (400)
T ss_dssp             EHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT--TCEECC-------
T ss_pred             cHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc--cccccCC----C-
Confidence            999999753   5999999999999999999999999999999999999998   7899999999  3331100    0 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       218 --------------------------------------------------------------------------------  217 (400)
T 1nxk_A          218 --------------------------------------------------------------------------------  217 (400)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ....+.+||+.|+|||++.+..+...+|+||+|+++|||++|.. 
T Consensus       218 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~-  261 (400)
T 1nxk_A          218 -----------------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP-  261 (400)
T ss_dssp             --------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSC-
T ss_pred             -----------------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCC-
Confidence                                               01233478999999999998888899999999999999999987 


Q ss_pred             ccccccccCcchhhcH---HHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         310 SFQPHFLIPYLFILSC---RQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~---~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                              ||......   ......+..+... ..+.+..++..+.+||++||+.||++|||++++++||||....
T Consensus       262 --------pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          262 --------PFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             --------SCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             --------CCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence                    88653211   1123333333221 2223356889999999999999999999999999999998643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6.3e-39  Score=310.03  Aligned_cols=245  Identities=22%  Similarity=0.270  Sum_probs=201.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.|+++.+......||+|.+......    ..+|++++.++ +|+||+++++++.++...|+||||+++++|.+
T Consensus        30 lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~  105 (342)
T 2qr7_A           30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLD  105 (342)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHH
Confidence            58999999999998888888999988654332    35788888887 89999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC----CceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD----GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+... .+++..+..++.|++.||.|||++||+||||||+||++...    +.++|+|||  .+.......         
T Consensus       106 ~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg--~a~~~~~~~---------  174 (342)
T 2qr7_A          106 KILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG--FAKQLRAEN---------  174 (342)
T ss_dssp             HHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCT--TCEECBCTT---------
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECC--CcccCcCCC---------
Confidence            88754 69999999999999999999999999999999999998443    359999999  333110000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (342)
T 2qr7_A          175 --------------------------------------------------------------------------------  174 (342)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ....+.+||+.|+|||++.+..+...+|.||+|+++|||++|..      
T Consensus       175 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~------  218 (342)
T 2qr7_A          175 ------------------------------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT------  218 (342)
T ss_dssp             ------------------------------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCC------
Confidence                                          01223478999999999988767788999999999999999987      


Q ss_pred             cccCcchh--hcHHHHHHHHHhCCCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         315 FLIPYLFI--LSCRQALYLIATNKKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~--~~~~~~~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                         ||...  .+..+.+..+..+...... .+..++..+.+||++||+.||++|||++++++||||..
T Consensus       219 ---Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          219 ---PFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             ---SSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             ---CCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence               88652  4556667777666443221 23568899999999999999999999999999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.7e-38  Score=303.43  Aligned_cols=249  Identities=19%  Similarity=0.290  Sum_probs=204.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+....  ....+.+.+|+.+++.+ +|+||+++++++..++..++||||+++++|
T Consensus        37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L  116 (327)
T 3lm5_A           37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI  116 (327)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred             eCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcH
Confidence            589999999999887777788888776432  23467789999999998 569999999999999999999999999999


Q ss_pred             HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhhcc
Q psy9736          78 TDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        78 ~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+++..   ..+++..++.++.|++.||.|||+++++||||||+||+++.   ++.++|+|||  .+.......      
T Consensus       117 ~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg--~a~~~~~~~------  188 (327)
T 3lm5_A          117 FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG--MSRKIGHAC------  188 (327)
T ss_dssp             GGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGG--GCEEC----------
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCc--cccccCCcc------
Confidence            998854   46899999999999999999999999999999999999988   7899999999  433111000      


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       189 --------------------------------------------------------------------------------  188 (327)
T 3lm5_A          189 --------------------------------------------------------------------------------  188 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                        ......||+.|+|||++.+..+...+|.|++|+++|+|++|..   
T Consensus       189 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~---  231 (327)
T 3lm5_A          189 ----------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS---  231 (327)
T ss_dssp             ---------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC---
T ss_pred             ----------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCC---
Confidence                                              0122368999999999998888889999999999999999987   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                            ||.. .+..+....+...... .......++..+.+||++||+.||++|||++++|+||||+...
T Consensus       232 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          232 ------PFVG-EDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             ------SSCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             ------CCCC-CCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence                  8877 5555555555544322 2222345888999999999999999999999999999998643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.2e-38  Score=321.67  Aligned_cols=249  Identities=19%  Similarity=0.284  Sum_probs=205.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-------------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-------------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-------------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   67 (400)
                      ||+|+|+.||++.+......||+|.+.....             ...+.+.+|+.++++++|+||+++++++..+...++
T Consensus        44 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  123 (504)
T 3q5i_A           44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYL  123 (504)
T ss_dssp             EEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            6899999999998887777888887754321             235678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC---ceEEeccchhhhhhhcc
Q psy9736          68 VMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG---SVKLSKWNRFIATKLYI  143 (400)
Q Consensus        68 v~e~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~---~~~l~dfg~~~~~~~~~  143 (400)
                      ||||+++++|.+.+.. +.+++..+..++.|++.||.|||+.+|+||||||+||+++.++   .++|+|||  ++.....
T Consensus       124 v~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg--~a~~~~~  201 (504)
T 3q5i_A          124 VTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG--LSSFFSK  201 (504)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT--TCEECCT
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC--CCEEcCC
Confidence            9999999999988864 5799999999999999999999999999999999999998876   69999999  3331110


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .                                                                               
T Consensus       202 ~-------------------------------------------------------------------------------  202 (504)
T 3q5i_A          202 D-------------------------------------------------------------------------------  202 (504)
T ss_dssp             T-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                               .......||+.|+|||++.+ .+...+|+||+|+++|+|
T Consensus       203 -----------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l  240 (504)
T 3q5i_A          203 -----------------------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYIL  240 (504)
T ss_dssp             -----------------------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHH
T ss_pred             -----------------------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHH
Confidence                                                     01223468999999999875 567889999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ++|..         ||.. .+..+.+..+..+... ..+.+..+++.+.+||++||+.||++|||++|+|+||||+....
T Consensus       241 l~g~~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          241 LCGYP---------PFGG-QNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             HHSSC---------SSCC-SSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             HhCCC---------CCCC-CCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            99976         8877 6777777777776543 33344668999999999999999999999999999999997544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.3e-39  Score=320.41  Aligned_cols=258  Identities=22%  Similarity=0.285  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--------cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--------QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+......||+|.+....        ......+.+|+.++++++|+||+++++++. ....++||||+
T Consensus       143 LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~  221 (419)
T 3i6u_A          143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELM  221 (419)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECC
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcC
Confidence            589999999999887777788888765331        112234789999999999999999999875 55689999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC---ceEEeccchhhhhhhccccchh
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG---SVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      ++++|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||+++..+   .++|+|||  .+......    
T Consensus       222 ~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG--~a~~~~~~----  295 (419)
T 3i6u_A          222 EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGET----  295 (419)
T ss_dssp             TTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS--TTTSCC------
T ss_pred             CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc--cceecCCC----
Confidence            99999998865 4799999999999999999999999999999999999997654   59999999  44311100    


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       296 --------------------------------------------------------------------------------  295 (419)
T 3i6u_A          296 --------------------------------------------------------------------------------  295 (419)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                          ....+.+||+.|+|||++..   ..+...+|.||+|+++|+|++
T Consensus       296 ------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt  339 (419)
T 3i6u_A          296 ------------------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  339 (419)
T ss_dssp             ---------------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH
Confidence                                                00223478999999999864   444568899999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                      |..         ||............+..+.....+. +..+++.+.+||.+||+.||++|||++++|+||||+......
T Consensus       340 g~~---------pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~  410 (419)
T 3i6u_A          340 GYP---------PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR  410 (419)
T ss_dssp             SSC---------SSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHH
T ss_pred             CCC---------CCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHH
Confidence            987         8876444444444455554333322 345788999999999999999999999999999999765555


Q ss_pred             Ccchhh
Q psy9736         385 SLTPLI  390 (400)
Q Consensus       385 ~l~~~~  390 (400)
                      ...+|+
T Consensus       411 ~~~~ll  416 (419)
T 3i6u_A          411 KFQDLL  416 (419)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            555554

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.3e-39  Score=308.55  Aligned_cols=250  Identities=21%  Similarity=0.273  Sum_probs=193.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+....... ...+.+|+.+++.++|+||+++++++..++..++||||++ ++|.+
T Consensus        10 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~   88 (324)
T 3mtl_A           10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQ   88 (324)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHH
T ss_pred             EcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHH
Confidence            689999999999988888889999876443211 1235579999999999999999999999999999999996 58888


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++...  .+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||  .+.......            
T Consensus        89 ~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~a~~~~~~~------------  154 (324)
T 3mtl_A           89 YLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFG--LARAKSIPT------------  154 (324)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSS--EEECC----------------
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCc--ccccccCCc------------
Confidence            88753  58999999999999999999999999999999999999999999999999  332111000            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (324)
T 3mtl_A          155 --------------------------------------------------------------------------------  154 (324)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .......||+.|+|||++.+ ..+...+|+||+|+++|+|++|..        
T Consensus       155 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~--------  199 (324)
T 3mtl_A          155 ---------------------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRP--------  199 (324)
T ss_dssp             -----------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ---------------------------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCC--------
Confidence                                       00122367889999999876 456688999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhC---CCC-Cc-----------------------chhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         317 IPYLFILSCRQALYLIATN---KKP-EI-----------------------KEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~---~~~-~~-----------------------~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                       ||.. .+..+.+..+.+.   ..+ ..                       .....+++.+.+||.+||+.||++|||++
T Consensus       200 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  277 (324)
T 3mtl_A          200 -LFPG-STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE  277 (324)
T ss_dssp             -SCCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             -CCCC-CCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHH
Confidence             8766 4555555444331   110 00                       11124677899999999999999999999


Q ss_pred             HHhcCccccccCC
Q psy9736         370 LLLKHPFLKIARP  382 (400)
Q Consensus       370 ~~l~hp~~~~~~~  382 (400)
                      |+|+||||.....
T Consensus       278 e~l~hp~f~~~~~  290 (324)
T 3mtl_A          278 DAMKHPFFLSLGE  290 (324)
T ss_dssp             HHTTSGGGGGGCS
T ss_pred             HHhcChhhhhccc
Confidence            9999999997543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=313.15  Aligned_cols=252  Identities=18%  Similarity=0.256  Sum_probs=182.9

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.  +......||+|.+....  ..+.+.+|+.++++++|+||+++++++..  +..+++||||+. ++
T Consensus        29 lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~  105 (405)
T 3rgf_A           29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HD  105 (405)
T ss_dssp             CC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EE
T ss_pred             eeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CC
Confidence            6999999999998  44567788999886443  23568899999999999999999999965  678999999995 58


Q ss_pred             hHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe----cCCCceEEeccchhhhhhhc
Q psy9736          77 LTDVVTET----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL----GLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        77 L~~~i~~~----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~----~~~~~~~l~dfg~~~~~~~~  142 (400)
                      |.+++...          .+++..++.++.||+.||.|||+.+|+||||||+||++    +.++.++|+|||  ++....
T Consensus       106 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg--~a~~~~  183 (405)
T 3rgf_A          106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG--FARLFN  183 (405)
T ss_dssp             HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT--CCC---
T ss_pred             HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC--CceecC
Confidence            88777521          38999999999999999999999999999999999999    677999999999  443221


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      .....                                                                           
T Consensus       184 ~~~~~---------------------------------------------------------------------------  188 (405)
T 3rgf_A          184 SPLKP---------------------------------------------------------------------------  188 (405)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCcc---------------------------------------------------------------------------
Confidence            11000                                                                           


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSIL  301 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~  301 (400)
                                                               .......+||+.|+|||++.+.. +...+|+||+||++|
T Consensus       189 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  227 (405)
T 3rgf_A          189 -----------------------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  227 (405)
T ss_dssp             -------------------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred             -----------------------------------------cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence                                                     00123457899999999998754 668899999999999


Q ss_pred             hhcCCCCcccccccccCcchhhc--------HHHHHHHHHhC--CCCCcchhh---------------------------
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFILS--------CRQALYLIATN--KKPEIKEKE---------------------------  344 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~~~--------~~~~~~~i~~~--~~~~~~~~~---------------------------  344 (400)
                      ||++|..         ||.....        ..+.+..+...  .++. ..+.                           
T Consensus       228 ell~g~~---------pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (405)
T 3rgf_A          228 ELLTSEP---------IFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD-KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK  297 (405)
T ss_dssp             HHHHSSC---------TTCCCC------CCCCHHHHHHHHHHHCCCCT-TTCGGGGGSTTHHHHHHHCCGGGGTTCCHHH
T ss_pred             HHHhCCC---------CCCCccccccccccchHHHHHHHHHhhCCCCh-hhcchhhcCcchhhhhhhccccCCCcchhhh
Confidence            9999976         6643211        12233333211  1100 0000                           


Q ss_pred             -------hhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         345 -------KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       345 -------~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                             ..+..+.+||++||+.||++|||++|+|+||||+..+.+
T Consensus       298 ~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             HHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred             hHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCC
Confidence                   015678999999999999999999999999999975543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.3e-38  Score=325.59  Aligned_cols=245  Identities=19%  Similarity=0.239  Sum_probs=202.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++....++..||+|.+...   .....+.+.+|+.+++.++|+||+++++++.+++..|+||||++|++|
T Consensus       192 LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L  271 (576)
T 2acx_A          192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL  271 (576)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence            68999999999988777778888877532   122346688999999999999999999999999999999999999999


Q ss_pred             HHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          78 TDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        78 ~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+++...   .+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++......          
T Consensus       272 ~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFG--la~~~~~~----------  339 (576)
T 2acx_A          272 KFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLG--LAVHVPEG----------  339 (576)
T ss_dssp             HHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT--TCEECCTT----------
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecc--cceecccC----------
Confidence            9988753   49999999999999999999999999999999999999999999999999  33311000          


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       340 --------------------------------------------------------------------------------  339 (576)
T 2acx_A          340 --------------------------------------------------------------------------------  339 (576)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......+||+.|+|||++.+..+...+|.||+|+++|||++|..      
T Consensus       340 ------------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~------  383 (576)
T 2acx_A          340 ------------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS------  383 (576)
T ss_dssp             ------------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCC------
Confidence                                          00123479999999999998888889999999999999999987      


Q ss_pred             cccCcchhh---cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         315 FLIPYLFIL---SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~---~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                         ||....   ........+... +..+  +..+++.+.+||++||+.||++||     +++|+++||||+.
T Consensus       384 ---PF~~~~~~~~~~~i~~~i~~~-~~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          384 ---PFQQRKKKIKREEVERLVKEV-PEEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             ---SSSCSSSCCCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             ---CCcccccchhHHHHHHHhhcc-cccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence               887632   233344444433 3333  345889999999999999999999     8999999999986

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.5e-38  Score=299.73  Aligned_cols=241  Identities=21%  Similarity=0.208  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+.....  ....+...|+..+..+ +|+||+++++++..++..++||||+ +++|
T Consensus        65 LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L  143 (311)
T 3p1a_A           65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL  143 (311)
T ss_dssp             EEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred             eccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCH
Confidence            6899999999998888888899997654322  2334455666666554 9999999999999999999999999 6688


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+.+..  ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.....    .       
T Consensus       144 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG--~a~~~~~----~-------  210 (311)
T 3p1a_A          144 QQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFG--LLVELGT----A-------  210 (311)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCT--TCEECC-------------
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccce--eeeeccc----C-------
Confidence            888764  369999999999999999999999999999999999999999999999999  3321100    0       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (311)
T 3p1a_A          211 --------------------------------------------------------------------------------  210 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   .......||+.|+|||++.+ .++..+|+||+|+++|||++|.-       
T Consensus       211 -----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~-------  253 (311)
T 3p1a_A          211 -----------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNME-------  253 (311)
T ss_dssp             ---------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCC-------
T ss_pred             -----------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCC-------
Confidence                                         00223368999999999887 57788999999999999999954       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                        ||....    ....+..+.. ....+..+++.+.+||.+||+.||++|||++++|+||||++
T Consensus       254 --~~~~~~----~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          254 --LPHGGE----GWQQLRQGYL-PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             --CCSSHH----HHHHHTTTCC-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             --CCCCcc----HHHHHhccCC-CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence              444421    2222333322 22224557889999999999999999999999999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.1e-38  Score=303.98  Aligned_cols=250  Identities=20%  Similarity=0.291  Sum_probs=206.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||.+.+......+++|.+...   .....+.+.+|+.+++.++|+||+++++++..++..+++|||+.+++|
T Consensus        49 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  128 (335)
T 2owb_A           49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL  128 (335)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCH
Confidence            58899999999988777777777776533   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. ..+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+.......           
T Consensus       129 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~~~-----------  195 (335)
T 2owb_A          129 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVEYDG-----------  195 (335)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT--TCEECCSTT-----------
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeecc--CceecccCc-----------
Confidence            998875 479999999999999999999999999999999999999999999999999  332110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       196 --------------------------------------------------------------------------------  195 (335)
T 2owb_A          196 --------------------------------------------------------------------------------  195 (335)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       196 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  239 (335)
T 2owb_A          196 ----------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP--------  239 (335)
T ss_dssp             ----------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcC--------
Confidence                                        01223468899999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                       ||.. .+..+....+..+.. .+  +..++..+.+||++||+.||++|||++++++||||.....+.
T Consensus       240 -pf~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~  302 (335)
T 2owb_A          240 -PFET-SCLKETYLRIKKNEY-SI--PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  302 (335)
T ss_dssp             -TTCC-SSHHHHHHHHHHTCC-CC--CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             -CCCC-CCHHHHHHHHhcCCC-CC--CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence             8766 445555555555532 22  335788999999999999999999999999999999765544

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=4.1e-38  Score=294.83  Aligned_cols=241  Identities=21%  Similarity=0.266  Sum_probs=190.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+......||+|.+...  .......+.+|+..+..+ +|+||+++++++..++..++||||+++++|
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   98 (289)
T 1x8b_A           19 IGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL   98 (289)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             hcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcH
Confidence            58999999999988878888888887643  233456788999999998 999999999999999999999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-------------------ceEEecc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-------------------SVKLSKW  133 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-------------------~~~l~df  133 (400)
                      .+++..     ..+++..++.++.|++.||.|||+++++||||||+||+++.++                   .++|+||
T Consensus        99 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  178 (289)
T 1x8b_A           99 ADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL  178 (289)
T ss_dssp             HHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCC
T ss_pred             HHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccc
Confidence            999874     4589999999999999999999999999999999999998554                   6788888


Q ss_pred             chhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeee
Q psy9736         134 NRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVN  213 (400)
Q Consensus       134 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (400)
                      |  .+....                                                                       
T Consensus       179 g--~~~~~~-----------------------------------------------------------------------  185 (289)
T 1x8b_A          179 G--HVTRIS-----------------------------------------------------------------------  185 (289)
T ss_dssp             T--TCEETT-----------------------------------------------------------------------
T ss_pred             c--cccccC-----------------------------------------------------------------------
Confidence            7  222100                                                                       


Q ss_pred             ecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccC
Q psy9736         214 YLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTP  292 (400)
Q Consensus       214 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d  292 (400)
                                                                          ......||+.|+|||++.+. .+...+|
T Consensus       186 ----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D  213 (289)
T 1x8b_A          186 ----------------------------------------------------SPQVEEGDSRFLANEVLQENYTHLPKAD  213 (289)
T ss_dssp             ----------------------------------------------------CSCCCCCCGGGCCHHHHTTCCTTHHHHH
T ss_pred             ----------------------------------------------------CccccCCCccccChhHhcCCCCCCchhh
Confidence                                                                01122488899999998775 3336899


Q ss_pred             CCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         293 PTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       293 ~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      +||+|+++|+|++|.-         |+.. .   .....+..+..+.+  +..++..+.+||.+||+.||++|||+.+++
T Consensus       214 i~slG~il~~l~~~~~---------~~~~-~---~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll  278 (289)
T 1x8b_A          214 IFALALTVVCAAGAEP---------LPRN-G---DQWHEIRQGRLPRI--PQVLSQEFTELLKVMIHPDPERRPSAMALV  278 (289)
T ss_dssp             HHHHHHHHHHHTTCCC---------CCSS-S---HHHHHHHTTCCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHhcCCC---------CCcc-h---hHHHHHHcCCCCCC--CcccCHHHHHHHHHHhCCCcccCCCHHHHh
Confidence            9999999999999974         3333 2   22334455544444  335788999999999999999999999999


Q ss_pred             cCccccccC
Q psy9736         373 KHPFLKIAR  381 (400)
Q Consensus       373 ~hp~~~~~~  381 (400)
                      +||||+...
T Consensus       279 ~h~~~~~~~  287 (289)
T 1x8b_A          279 KHSVLLSAS  287 (289)
T ss_dssp             TCTTC----
T ss_pred             hChHhhhhc
Confidence            999999753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.5e-38  Score=308.88  Aligned_cols=249  Identities=23%  Similarity=0.356  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||++.+......||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.+
T Consensus        41 lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  120 (360)
T 3eqc_A           41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ  120 (360)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHH
T ss_pred             ecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHH
Confidence            589999999999888888889999886553 2345778999999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++... .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||  .+.......            
T Consensus       121 ~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~------------  186 (360)
T 3eqc_A          121 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLIDSM------------  186 (360)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCC--CCHHHHHHC------------
T ss_pred             HHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECC--CCccccccc------------
Confidence            99754 799999999999999999999996 99999999999999999999999999  433121100            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (360)
T 3eqc_A          187 --------------------------------------------------------------------------------  186 (360)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                   .....||+.|+|||++.+..+...+|+|++|+++|+|++|..         
T Consensus       187 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~---------  228 (360)
T 3eqc_A          187 -----------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY---------  228 (360)
T ss_dssp             ---------------------------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSC---------
T ss_pred             -----------------------------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCC---------
Confidence                                         112368889999999988888888999999999999999976         


Q ss_pred             Ccchhhc-----------------------------------------HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHH
Q psy9736         318 PYLFILS-----------------------------------------CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQ  356 (400)
Q Consensus       318 P~~~~~~-----------------------------------------~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  356 (400)
                      ||.....                                         ..+....+.....+..+ ...++..+.+||++
T Consensus       229 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~  307 (360)
T 3eqc_A          229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNK  307 (360)
T ss_dssp             CSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCC-cccccHHHHHHHHH
Confidence            6644211                                         11223333444333332 23478899999999


Q ss_pred             hhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         357 CLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       357 ~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ||+.||++|||++++|+||||+....
T Consensus       308 ~L~~dP~~Rpt~~ell~hp~~~~~~~  333 (360)
T 3eqc_A          308 CLIKNPAERADLKQLMVHAFIKRSDA  333 (360)
T ss_dssp             HHCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             HhhcChhhCCCHHHHhhChHhhcchH
Confidence            99999999999999999999997443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.5e-38  Score=307.41  Aligned_cols=247  Identities=23%  Similarity=0.357  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+++.||++.+...+..||+|.+.....        ...+.+.+|+.+++++ +|+||+++++++......++||||
T Consensus       102 lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  181 (365)
T 2y7j_A          102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL  181 (365)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECC
T ss_pred             EecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEe
Confidence            5889999999998877777888887754431        1246688999999998 899999999999999999999999


Q ss_pred             cCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          72 LPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        72 ~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++++|.+++... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||  .+......      
T Consensus       182 ~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG--~~~~~~~~------  253 (365)
T 2y7j_A          182 MRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG--FSCHLEPG------  253 (365)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECCTT------
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecC--cccccCCC------
Confidence            9999999998754 79999999999999999999999999999999999999999999999999  33211100      


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       254 --------------------------------------------------------------------------------  253 (365)
T 2y7j_A          254 --------------------------------------------------------------------------------  253 (365)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC------CCCcccCCCCccchhhhhc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK------NKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~d~~s~g~~~~~~~  304 (400)
                                                        .......||+.|+|||++.+.      .+...+|.||+|+++|+|+
T Consensus       254 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell  299 (365)
T 2y7j_A          254 ----------------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL  299 (365)
T ss_dssp             ----------------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH
T ss_pred             ----------------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH
Confidence                                              001234688889999987632      4557899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      +|..         ||.. .+.......+..+... ..+.+...+..+.+||++||+.||++|||++++|+||||+.
T Consensus       300 ~g~~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          300 AGSP---------PFWH-RRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HSSC---------SSCC-SSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HCCC---------CCCC-CCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            9987         8876 5556666666665433 22334567889999999999999999999999999999973

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.5e-38  Score=307.04  Aligned_cols=251  Identities=17%  Similarity=0.214  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+......||+|.+.... ....+.+.+|+.++++++|+||+++++++...     ...++++||+. 
T Consensus        35 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-  113 (364)
T 3qyz_A           35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-  113 (364)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-
T ss_pred             eecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-
Confidence            589999999999988888899999986443 23347789999999999999999999998754     36899999996 


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++|.+++..+.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+..........      
T Consensus       114 ~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~a~~~~~~~~~~------  185 (364)
T 3qyz_A          114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHT------  185 (364)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEECCGGGCBC------
T ss_pred             cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCc--ceEecCCCCCcc------
Confidence            599999988889999999999999999999999999999999999999999999999999  433111110000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (364)
T 3qyz_A          186 --------------------------------------------------------------------------------  185 (364)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    .......||+.|+|||++.+. .+...+|.||+|+++|+|++|..     
T Consensus       186 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~-----  230 (364)
T 3qyz_A          186 ------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP-----  230 (364)
T ss_dssp             ------------------------------CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ------------------------------ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCC-----
Confidence                                          012334789999999987654 36688999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHh---CCC----------------------CCcc---hhhhhcHHHHHHHHHhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIAT---NKK----------------------PEIK---EKEKLSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~---~~~----------------------~~~~---~~~~~s~~~~dli~~~L~~dP~~R  365 (400)
                          ||.. .+..+.+..+..   ...                      ...+   ...+++..+.+||++||+.||++|
T Consensus       231 ----pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  305 (364)
T 3qyz_A          231 ----IFPG-KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR  305 (364)
T ss_dssp             ----SSCC-SSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             ----CCCC-CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhC
Confidence                7765 333333333321   100                      0000   012367889999999999999999


Q ss_pred             hcHHHHhcCcccccc
Q psy9736         366 ASASLLLKHPFLKIA  380 (400)
Q Consensus       366 ~s~~~~l~hp~~~~~  380 (400)
                      ||++|+|+||||+..
T Consensus       306 ~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          306 IEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCHHHHHTSGGGTTT
T ss_pred             CCHHHHhcCcchhhc
Confidence            999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4.5e-38  Score=296.71  Aligned_cols=250  Identities=20%  Similarity=0.291  Sum_probs=205.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||.+.+......+++|.+...   .....+.+.+|+.+++.++|+||+++++++..++..+++|||+++++|
T Consensus        23 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  102 (294)
T 2rku_A           23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL  102 (294)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCH
Confidence            58899999999988777777777776533   223457788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......           
T Consensus       103 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg--~~~~~~~~~-----------  169 (294)
T 2rku_A          103 LELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG--LATKVEYDG-----------  169 (294)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEECCSTT-----------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEecc--CceecccCc-----------
Confidence            998875 479999999999999999999999999999999999999999999999999  332110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (294)
T 2rku_A          170 --------------------------------------------------------------------------------  169 (294)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       170 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~--------  213 (294)
T 2rku_A          170 ----------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP--------  213 (294)
T ss_dssp             ----------------------------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCC--------
Confidence                                        00123468899999999988877789999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                       ||.. ....+....+..... .+  +..++..+.+||.+||+.||++|||++++++||||+....+.
T Consensus       214 -p~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          214 -PFET-SCLKETYLRIKKNEY-SI--PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             -TTCC-SSHHHHHHHHHTTCC-CC--CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             -CCCC-CCHHHHHHHHhhccC-CC--ccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence             8766 445555555555432 22  345788999999999999999999999999999999754433

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1e-38  Score=306.66  Aligned_cols=251  Identities=20%  Similarity=0.264  Sum_probs=198.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+...+..||+|.+.....  ...+.+.+|+.++++++|+||+++++++..++..++||||+++++|.
T Consensus        33 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~  112 (331)
T 4aaa_A           33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD  112 (331)
T ss_dssp             GGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred             EeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHH
Confidence            6899999999998888888888888754433  23466789999999999999999999999999999999999998888


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........           
T Consensus       113 ~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~-----------  179 (331)
T 4aaa_A          113 DLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFG--FARTLAAPGE-----------  179 (331)
T ss_dssp             HHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCT--TC-------------------
T ss_pred             HHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCC--CceeecCCcc-----------
Confidence            87653 479999999999999999999999999999999999999999999999999  3331111000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (331)
T 4aaa_A          180 --------------------------------------------------------------------------------  179 (331)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......||+.|+|||++.+. .+...+|+|++|+++|+|++|..        
T Consensus       180 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~--------  223 (331)
T 4aaa_A          180 ----------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP--------  223 (331)
T ss_dssp             --------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCC--------
Confidence                                        01223688899999998875 56688999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCC---------------------Cc-------chhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         317 IPYLFILSCRQALYLIATNKKP---------------------EI-------KEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~---------------------~~-------~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                       ||.. .+..+.+..+......                     .+       .....+++.+.+||.+||+.||++|||+
T Consensus       224 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  301 (331)
T 4aaa_A          224 -LFPG-DSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC  301 (331)
T ss_dssp             -SCCC-SSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCG
T ss_pred             -CCCC-CCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCH
Confidence             7766 4444444444321000                     00       0112467899999999999999999999


Q ss_pred             HHHhcCccccccCC
Q psy9736         369 SLLLKHPFLKIARP  382 (400)
Q Consensus       369 ~~~l~hp~~~~~~~  382 (400)
                      +|+|+||||+....
T Consensus       302 ~ell~hp~f~~~~~  315 (331)
T 4aaa_A          302 AELLHHDFFQMDGF  315 (331)
T ss_dssp             GGGGGSHHHHGGGH
T ss_pred             HHHhcCchhccCCh
Confidence            99999999997543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.1e-38  Score=299.63  Aligned_cols=254  Identities=21%  Similarity=0.221  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeE--------------eCCEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYL--------------VGEELW   66 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~--------------~~~~~~   66 (400)
                      ||+|+++.||++.+......||+|.+........+.+.+|+.++++++|+||+++++++.              .....+
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (320)
T 2i6l_A           19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY   98 (320)
T ss_dssp             CC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEE
T ss_pred             eccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCcee
Confidence            699999999999998888999999887666556678899999999999999999998873              346889


Q ss_pred             EEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec-CCCceEEeccchhhhhhhcccc
Q psy9736          67 VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        67 lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      ++|||++ ++|.+++..+.+++..++.++.|++.||.|||+++++|+||||+||+++ .++.++|+|||  .+.......
T Consensus        99 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg--~~~~~~~~~  175 (320)
T 2i6l_A           99 IVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG--LARIMDPHY  175 (320)
T ss_dssp             EEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCT--TCBCC----
T ss_pred             EEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCc--cccccCCCc
Confidence            9999996 5999999888899999999999999999999999999999999999997 56799999999  443111100


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ...                                                                             
T Consensus       176 ~~~-----------------------------------------------------------------------------  178 (320)
T 2i6l_A          176 SHK-----------------------------------------------------------------------------  178 (320)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                             .......||+.|+|||++.. ..+...+|.||+|+++|||+
T Consensus       179 ---------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~  219 (320)
T 2i6l_A          179 ---------------------------------------GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML  219 (320)
T ss_dssp             ----------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred             ---------------------------------------cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHH
Confidence                                                   01223367889999998876 55668899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCc---------------------------chhhhhcHHHHHHHHHh
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEI---------------------------KEKEKLSQIFQDFLDQC  357 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~~s~~~~dli~~~  357 (400)
                      +|..         ||.. .+..+....+....+...                           .....++..+.+||.+|
T Consensus       220 ~g~~---------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  289 (320)
T 2i6l_A          220 TGKT---------LFAG-AHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQI  289 (320)
T ss_dssp             HSSC---------SSCC-SSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTT
T ss_pred             hCCC---------CCCC-CCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHH
Confidence            9986         8776 445555554443321110                           01124688999999999


Q ss_pred             hhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         358 LEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       358 L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      |+.||++|||++++|+||||+....+
T Consensus       290 L~~dP~~Rpt~~ell~hp~~~~~~~p  315 (320)
T 2i6l_A          290 LTFSPMDRLTAEEALSHPYMSIYSFP  315 (320)
T ss_dssp             SCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred             cCCCccccCCHHHHhCCcccccccCc
Confidence            99999999999999999999975443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.3e-38  Score=300.89  Aligned_cols=258  Identities=31%  Similarity=0.491  Sum_probs=183.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.|+.+.+......||+|.+.... ....+.+.+|+.++++++|+||+++++++..++..++||||+++++|.+
T Consensus        23 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  102 (303)
T 2vwi_A           23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD  102 (303)
T ss_dssp             CC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHH
T ss_pred             eccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHH
Confidence            689999999999988888899999886543 2234668899999999999999999999999999999999999999999


Q ss_pred             HHhh---------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          80 VVTE---------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        80 ~i~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      ++..         ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........  
T Consensus       103 ~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg--~~~~~~~~~~~~--  178 (303)
T 2vwi_A          103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFG--VSAFLATGGDIT--  178 (303)
T ss_dssp             HHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCH--HHHHCC--------
T ss_pred             HHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEecc--chheeccCCCcc--
Confidence            8863         358999999999999999999999999999999999999999999999999  443221110000  


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (303)
T 2vwi_A          179 --------------------------------------------------------------------------------  178 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                      .........||+.|+|||++.. ..+...+|.|++|+++|+|++|.. 
T Consensus       179 --------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~-  225 (303)
T 2vwi_A          179 --------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA-  225 (303)
T ss_dssp             -----------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC-
T ss_pred             --------------------------------chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC-
Confidence                                            0001233468999999999876 456688999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcch-------hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                              ||.. .+..........+..+....       ...++..+.+||.+||+.||++|||++++++||||+..+.
T Consensus       226 --------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          226 --------PYHK-YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             --------TTTT-SCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             --------CCcc-CchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence                    8876 34444444444443332221       1346788999999999999999999999999999997665


Q ss_pred             CC
Q psy9736         383 LA  384 (400)
Q Consensus       383 ~~  384 (400)
                      ..
T Consensus       297 ~~  298 (303)
T 2vwi_A          297 KE  298 (303)
T ss_dssp             --
T ss_pred             Cc
Confidence            43

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3.3e-38  Score=297.24  Aligned_cols=251  Identities=27%  Similarity=0.415  Sum_probs=200.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+......|++|.+........+.+.+|+.+++.++|+||+++++++..++..++++||+++++|.++
T Consensus        30 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (295)
T 2clq_A           30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL  109 (295)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHH
T ss_pred             EeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHH
Confidence            58899999999988888888999988766555667899999999999999999999999999999999999999999999


Q ss_pred             Hhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-CCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          81 VTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        81 i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +...    .+++..+..++.|++.||.|||+.+++|+||||+||+++. ++.++|+|||  .+.......          
T Consensus       110 l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg--~~~~~~~~~----------  177 (295)
T 2clq_A          110 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFG--TSKRLAGIN----------  177 (295)
T ss_dssp             HHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTT--TCEESCC------------
T ss_pred             HHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecc--cccccCCCC----------
Confidence            8754    4678899999999999999999999999999999999988 8999999999  333110000          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (295)
T 2clq_A          178 --------------------------------------------------------------------------------  177 (295)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCCCccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                   .......||+.|+|||++.+..  +...+|.|++|+++|+|++|..     
T Consensus       178 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~-----  223 (295)
T 2clq_A          178 -----------------------------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP-----  223 (295)
T ss_dssp             --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSC-----
T ss_pred             -----------------------------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCC-----
Confidence                                         0012336888999999987643  5578999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHH-HhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         314 HFLIPYLFILSCRQALYLI-ATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i-~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                          ||............. .....+.+  +..++..+.+||.+||+.||++|||++++|+||||+.....
T Consensus       224 ----pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  288 (295)
T 2clq_A          224 ----PFYELGEPQAAMFKVGMFKVHPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK  288 (295)
T ss_dssp             ----TTGGGSSHHHHHHHHHHHCCCCCC--CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC----
T ss_pred             ----CccCCCchhHHHHhhccccccccc--cccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcccc
Confidence                887644443333332 22333333  34578899999999999999999999999999999975543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.4e-38  Score=331.54  Aligned_cols=245  Identities=17%  Similarity=0.231  Sum_probs=209.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+......||+|.+...   .....+.+..|..++..+ +|+||++++++|.+.+.+|+||||+++++
T Consensus       349 LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~  428 (674)
T 3pfq_A          349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD  428 (674)
T ss_dssp             SSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCB
T ss_pred             EccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCc
Confidence            79999999999988877777888877532   223446678899999987 79999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |..++.. +.+++..++.++.||+.||.|||+.+|+||||||+||+++.+|.++|+|||  ++......           
T Consensus       429 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFG--la~~~~~~-----------  495 (674)
T 3pfq_A          429 LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG--MCKENIWD-----------  495 (674)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCT--TCEECCCT-----------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecc--eeeccccC-----------
Confidence            9999976 579999999999999999999999999999999999999999999999999  43310000           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       496 --------------------------------------------------------------------------------  495 (674)
T 3pfq_A          496 --------------------------------------------------------------------------------  495 (674)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .....+.+||+.|+|||++.+..++..+|.||+|+++|||++|..       
T Consensus       496 ----------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~-------  540 (674)
T 3pfq_A          496 ----------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA-------  540 (674)
T ss_dssp             ----------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCC-------
Confidence                                        011345689999999999999988899999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH-----HHHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-----SLLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~-----~~~l~hp~~~~  379 (400)
                        ||.. .+..+.+..|...... +  +..++..+.+||++||+.||++|+++     +|+++||||+.
T Consensus       541 --Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          541 --PFEG-EDEDELFQSIMEHNVA-Y--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             --SSCC-SSHHHHHHHHHSSCCC-C--CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             --CCCC-CCHHHHHHHHHhCCCC-C--CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence              8877 6777778888776433 2  34589999999999999999999997     99999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=4.8e-38  Score=306.99  Aligned_cols=245  Identities=17%  Similarity=0.236  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||+|+|+.|+++.+......||+|.+....  ....+.+.+|+.+++.++|+||+++++++...+      ..++||||+
T Consensus        33 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~  112 (371)
T 2xrw_A           33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM  112 (371)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECC
T ss_pred             eEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcC
Confidence            589999999999888888889999876432  234567889999999999999999999987654      789999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++ +|.+.+. ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+.......       
T Consensus       113 ~~-~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~a~~~~~~~-------  181 (371)
T 2xrw_A          113 DA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTSF-------  181 (371)
T ss_dssp             SE-EHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC--C---------------
T ss_pred             CC-CHHHHHh-hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEee--ccccccccc-------
Confidence            64 7888775 458999999999999999999999999999999999999999999999999  433111000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (371)
T 2xrw_A          182 --------------------------------------------------------------------------------  181 (371)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ......||+.|+|||++.+..+...+|+||+|+++|+|++|..    
T Consensus       182 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~----  224 (371)
T 2xrw_A          182 ---------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV----  224 (371)
T ss_dssp             -----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC----
T ss_pred             ---------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC----
Confidence                                             0123468999999999999888899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcc---------------------------------------hhhhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIK---------------------------------------EKEKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~---------------------------------------~~~~~s~~~~dl  353 (400)
                           ||.. .+....+..+.+......+                                       .....+..+.+|
T Consensus       225 -----pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (371)
T 2xrw_A          225 -----LFPG-TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL  298 (371)
T ss_dssp             -----SSCC-SSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             -----CCCC-CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHH
Confidence                 8776 5555555555443111000                                       011236789999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      |++||+.||++|||++|+|+||||+.
T Consensus       299 i~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          299 LSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             HHHHCcCChhhCCCHHHHhCCcchhh
Confidence            99999999999999999999999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.9e-38  Score=313.61  Aligned_cols=246  Identities=20%  Similarity=0.259  Sum_probs=196.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC------CCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN------KHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+......||+|.+.... ...+.+.+|+.+++.+      .|+||+++++++......+++|||+. 
T Consensus       105 LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-  182 (429)
T 3kvw_A          105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-  182 (429)
T ss_dssp             EEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-
T ss_pred             cccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-
Confidence            689999999999998888999999986432 3456678899998887      56799999999999999999999995 


Q ss_pred             CChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc--eEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS--VKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++...   .+++..++.++.||+.||.|||+.+|+||||||+||+++.++.  ++|+|||  ++...    ..  
T Consensus       183 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG--~a~~~----~~--  254 (429)
T 3kvw_A          183 MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYE----HQ--  254 (429)
T ss_dssp             CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT--TCEET----TC--
T ss_pred             CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc--cceec----CC--
Confidence            6999988754   4899999999999999999999999999999999999999987  9999999  33200    00  


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       255 --------------------------------------------------------------------------------  254 (429)
T 3kvw_A          255 --------------------------------------------------------------------------------  254 (429)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                          ...+..||+.|+|||++.+..++..+|+||+|+++|||++|.. 
T Consensus       255 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~-  297 (429)
T 3kvw_A          255 ------------------------------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP-  297 (429)
T ss_dssp             ------------------------------------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC-
T ss_pred             ------------------------------------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC-
Confidence                                                0223478999999999999888899999999999999999975 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhC--CCC-C-----------------------------------------------
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATN--KKP-E-----------------------------------------------  339 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~--~~~-~-----------------------------------------------  339 (400)
                              ||.. .+..+.+..+...  .++ .                                               
T Consensus       298 --------pf~~-~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (429)
T 3kvw_A          298 --------LLPG-EDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPP  368 (429)
T ss_dssp             --------SSCC-SSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECST
T ss_pred             --------CCCC-CCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCc
Confidence                    7765 4444444444321  000 0                                               


Q ss_pred             -cchh-----hhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         340 -IKEK-----EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       340 -~~~~-----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                       ...+     ...++.+.+||++||+.||++|||++|+|+||||+...+
T Consensus       369 ~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~  417 (429)
T 3kvw_A          369 ESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP  417 (429)
T ss_dssp             TCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred             cchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence             0000     112677999999999999999999999999999997543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=297.87  Aligned_cols=248  Identities=18%  Similarity=0.286  Sum_probs=179.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.++.||++.+...+..|++|.+....   ....+.+.+|+.++++++|+||+++++++..++..++++||+++++|
T Consensus        19 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (278)
T 3cok_A           19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM   98 (278)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEH
T ss_pred             ecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcH
Confidence            588999999999887777888888875332   12246789999999999999999999999999999999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........         
T Consensus        99 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg--~~~~~~~~~~---------  167 (278)
T 3cok_A           99 NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG--LATQLKMPHE---------  167 (278)
T ss_dssp             HHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCT--TCEECC-------------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeec--ceeeccCCCC---------
Confidence            999876  368999999999999999999999999999999999999999999999999  3331110000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (278)
T 3cok_A          168 --------------------------------------------------------------------------------  167 (278)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                    ......||+.|+|||++.+..+...+|.|++|+++|+|++|..       
T Consensus       168 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-------  210 (278)
T 3cok_A          168 ------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP-------  210 (278)
T ss_dssp             ------------------------------------------------------CTHHHHHHHHHHHHHHSSC-------
T ss_pred             ------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCC-------
Confidence                                          0122368889999999998888889999999999999999986       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                        ||.. .+.......+...   ....+..++..+.+||.+||+.||++|||++++++||||.....
T Consensus       211 --p~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          211 --PFDT-DTVKNTLNKVVLA---DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             --SSCC-CSCC-----CCSS---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred             --CCCC-hhHHHHHHHHhhc---ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence              7765 2222222222222   12223457889999999999999999999999999999987543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-38  Score=306.16  Aligned_cols=250  Identities=18%  Similarity=0.223  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-----HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-----KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-----~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+++.||.+.+...+..||+|.+.......     .+.+.+|+.+++.++|+||+++++++...+..++||||+++ 
T Consensus        18 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-   96 (346)
T 1ua2_A           18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-   96 (346)
T ss_dssp             EEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-
T ss_pred             EeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-
Confidence            589999999999998888889999886532211     24578999999999999999999999999999999999965 


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+.+...  .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.......        
T Consensus        97 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg--~a~~~~~~~--------  166 (346)
T 1ua2_A           97 DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFG--LAKSFGSPN--------  166 (346)
T ss_dssp             EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCG--GGSTTTSCC--------
T ss_pred             CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecc--cceeccCCc--------
Confidence            888888754  58899999999999999999999999999999999999999999999999  443111000        


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (346)
T 1ua2_A          167 --------------------------------------------------------------------------------  166 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     .......||+.|+|||++.+. .+...+|+||+|+++|||++|.-    
T Consensus       167 -------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~----  211 (346)
T 1ua2_A          167 -------------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP----  211 (346)
T ss_dssp             -------------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             -------------------------------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCC----
Confidence                                           012234689999999998764 35678999999999999999864    


Q ss_pred             cccccCcchhhcHHHHHHHHHhC--CCC--C------------------cc---hhhhhcHHHHHHHHHhhhhhhhhhhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATN--KKP--E------------------IK---EKEKLSQIFQDFLDQCLEEEVETRAS  367 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~--~~~--~------------------~~---~~~~~s~~~~dli~~~L~~dP~~R~s  367 (400)
                           ||.. .+..+.+..+...  .+.  .                  .+   ....++..+.+||++||+.||++|||
T Consensus       212 -----~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          212 -----FLPG-DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             -----SSCC-SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             -----CCCC-CCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence                 5544 5666665555432  110  0                  00   01345788999999999999999999


Q ss_pred             HHHHhcCccccccCC
Q psy9736         368 ASLLLKHPFLKIARP  382 (400)
Q Consensus       368 ~~~~l~hp~~~~~~~  382 (400)
                      ++|+|+||||++.+.
T Consensus       286 ~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          286 ATQALKMKYFSNRPG  300 (346)
T ss_dssp             HHHHHTSGGGTSSSC
T ss_pred             HHHHhcChhhhcCCC
Confidence            999999999997543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=9.9e-38  Score=294.61  Aligned_cols=249  Identities=22%  Similarity=0.324  Sum_probs=204.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---------cchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---------QPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---------~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ||+|+++.||.+.+......||+|.+....         ....+.+.+|+.+++++. |+||+++++++..++..++|||
T Consensus        25 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e  104 (298)
T 1phk_A           25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD  104 (298)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEe
Confidence            589999999999888888889999876443         123466889999999995 9999999999999999999999


Q ss_pred             ccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          71 YLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        71 ~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      |+++++|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||  .+......     
T Consensus       105 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg--~~~~~~~~-----  177 (298)
T 1phk_A          105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG--FSCQLDPG-----  177 (298)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECCTT-----
T ss_pred             ccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEeccc--chhhcCCC-----
Confidence            99999999999754 79999999999999999999999999999999999999999999999999  33211000     


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (298)
T 1phk_A          178 --------------------------------------------------------------------------------  177 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee------cCCCCcccCCCCccchhhhh
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL------DKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                         .......||+.|+|||++.      ...+...+|.|++|+++|+|
T Consensus       178 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l  222 (298)
T 1phk_A          178 -----------------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  222 (298)
T ss_dssp             -----------------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             -----------------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHH
Confidence                                               0012336788899999875      33455788999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ++|..         ||.. .+.......+..+... ..+....++..+.+||.+||+.||++|||++++++||||++..
T Consensus       223 ~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          223 LAGSP---------PFWH-RKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHSSC---------SSCC-SSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHCCC---------CCcC-ccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            99986         8866 5555566666655332 2223356889999999999999999999999999999999643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=8.9e-39  Score=308.03  Aligned_cols=240  Identities=20%  Similarity=0.265  Sum_probs=196.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+......||+|.+.....        ...+.+.+|+.++++++|+||+++++++..++..++||||+
T Consensus        32 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~  111 (335)
T 3dls_A           32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKH  111 (335)
T ss_dssp             CSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeC
Confidence            6999999999998888888888888765421        12235678999999999999999999999999999999999


Q ss_pred             CCC-ChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          73 PGG-SLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        73 ~~~-~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      .++ +|.+++... .+++..++.++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+......      
T Consensus       112 ~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg--~a~~~~~~------  183 (335)
T 3dls_A          112 GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG--SAAYLERG------  183 (335)
T ss_dssp             TTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT--TCEECCTT------
T ss_pred             CCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecc--cceECCCC------
Confidence            766 999998765 79999999999999999999999999999999999999999999999999  33311000      


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (335)
T 3dls_A          184 --------------------------------------------------------------------------------  183 (335)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                        .......||+.|+|||++.+..+ ...+|+||+|+++|+|++|.. 
T Consensus       184 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~-  228 (335)
T 3dls_A          184 ----------------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN-  228 (335)
T ss_dssp             ----------------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC-
T ss_pred             ----------------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCC-
Confidence                                              01223468999999999988776 467899999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                              ||.....       ..   ......+..+++.+.+||.+||+.||++|||++++++||||+...
T Consensus       229 --------pf~~~~~-------~~---~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          229 --------PFCELEE-------TV---EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             --------SCSSGGG-------GT---TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             --------chhhHHH-------HH---hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence                    8865211       11   112222444788999999999999999999999999999998643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=5.5e-38  Score=294.67  Aligned_cols=245  Identities=22%  Similarity=0.337  Sum_probs=204.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||.+.+......|++|.+....   ....+.+.+|+.+++.++|+||+++++++..++..+++|||+++++|
T Consensus        22 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  101 (284)
T 2vgo_A           22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL  101 (284)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcH
Confidence            589999999999888777888888875331   22346789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+...    ...        
T Consensus       102 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg--~~~~~----~~~--------  167 (284)
T 2vgo_A          102 YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--WSVHA----PSL--------  167 (284)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCT--TCEEC----SSS--------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEeccc--ccccC----ccc--------
Confidence            998875 479999999999999999999999999999999999999999999999999  32200    000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (284)
T 2vgo_A          168 --------------------------------------------------------------------------------  167 (284)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       168 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  210 (284)
T 2vgo_A          168 -----------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP--------  210 (284)
T ss_dssp             -----------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCC--------
Confidence                                         0123368889999999998888889999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                       ||.. .+.......+...... +  +..++..+.+||.+||+.||++|||++++++||||+...
T Consensus       211 -pf~~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          211 -PFDS-PSHTETHRRIVNVDLK-F--PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             -TTCC-SSHHHHHHHHHTTCCC-C--CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             -CCCC-CCHhHHHHHHhccccC-C--CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence             8766 4555555555554322 2  334788999999999999999999999999999999644

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-38  Score=299.94  Aligned_cols=249  Identities=29%  Similarity=0.492  Sum_probs=201.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEe------CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLV------GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~------~~~~~lv~e~~~   73 (400)
                      ||+|.++.||++.+......|++|.+..... ..+.+.+|+.+++++ +|+||+++++++..      +...++||||++
T Consensus        32 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~  110 (326)
T 2x7f_A           32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG  110 (326)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCT
T ss_pred             eccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCC
Confidence            5889999999998877788899998765433 456789999999998 89999999999987      468999999999


Q ss_pred             CCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhc
Q psy9736          74 GGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        74 ~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      +++|.+++..   ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........    
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~~~~----  184 (326)
T 2x7f_A          111 AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG--VSAQLDRTVG----  184 (326)
T ss_dssp             TEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCT--TTC-----------
T ss_pred             CCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCc--CceecCcCcc----
Confidence            9999999975   369999999999999999999999999999999999999999999999999  3331110000    


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (326)
T 2x7f_A          185 --------------------------------------------------------------------------------  184 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcC
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                         ......||+.|+|||++.     ...+...+|+|++|+++|+|++
T Consensus       185 -----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  229 (326)
T 2x7f_A          185 -----------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  229 (326)
T ss_dssp             -----------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence                                               012235788888888886     4455678999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      |..         ||.. .+.......+.....+... ...++..+.+||.+||..||++|||++++++||||+....
T Consensus       230 g~~---------p~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          230 GAP---------PLCD-MHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             SSC---------TTTT-SCHHHHHHHHHHSCCCCCS-CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             CCC---------CCCC-CcHHHHHHHhhcCccccCC-ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            986         8866 6666677777776554433 3347889999999999999999999999999999997655

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5.1e-38  Score=320.17  Aligned_cols=246  Identities=18%  Similarity=0.263  Sum_probs=203.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++....++..||+|.+....   ....+.+.+|+.++++++|+||++++++|......|+||||++|++|
T Consensus       193 LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L  272 (543)
T 3c4z_A          193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI  272 (543)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCH
Confidence            589999999999877777778888775332   12346788999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTET-----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ..++...     .+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++......        
T Consensus       273 ~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFG--la~~~~~~--------  342 (543)
T 3c4z_A          273 RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG--LAVELKAG--------  342 (543)
T ss_dssp             HHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT--TCEECCTT--------
T ss_pred             HHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecc--eeeeccCC--------
Confidence            9988642     59999999999999999999999999999999999999999999999999  33311000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       343 --------------------------------------------------------------------------------  342 (543)
T 3c4z_A          343 --------------------------------------------------------------------------------  342 (543)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     .......+||+.|+|||++.+..++..+|.||+|+++|||++|..    
T Consensus       343 -------------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~----  387 (543)
T 3c4z_A          343 -------------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG----  387 (543)
T ss_dssp             -------------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC----
T ss_pred             -------------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCC----
Confidence                                           001233489999999999999888899999999999999999987    


Q ss_pred             cccccCcchhh---cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCccccc
Q psy9736         313 PHFLIPYLFIL---SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKI  379 (400)
Q Consensus       313 ~~~~~P~~~~~---~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~  379 (400)
                           ||....   ...+....+..... .+  +..++..+.+||++||+.||++||+     ++++++||||+.
T Consensus       388 -----PF~~~~~~~~~~~~~~~i~~~~~-~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          388 -----PFRARGEKVENKELKQRVLEQAV-TY--PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             -----SSCCTTCCCCHHHHHHHHHHCCC-CC--CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             -----CCCCCccchhHHHHHHHHhhccc-CC--CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence                 887632   34555555655533 22  3458899999999999999999995     589999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=7.2e-38  Score=293.35  Aligned_cols=248  Identities=20%  Similarity=0.276  Sum_probs=202.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|.++.||.+.+......|++|.+.....      ...+.+.+|+.++++++|+||+++++++..+...+++|||+++
T Consensus        13 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   92 (283)
T 3bhy_A           13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG   92 (283)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             hcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCC
Confidence            5889999999997776667777777654321      2367899999999999999999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      ++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++    .++|+|||  .+.......    
T Consensus        93 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg--~~~~~~~~~----  166 (283)
T 3bhy_A           93 GELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG--IAHKIEAGN----  166 (283)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCT--TCEECC-------
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecc--cceeccCCC----
Confidence            999999875 4799999999999999999999999999999999999998877    89999999  332110000    


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (283)
T 3bhy_A          167 --------------------------------------------------------------------------------  166 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                          ......||+.|+|||++....+...+|.|++|+++|+|++|.. 
T Consensus       167 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-  209 (283)
T 3bhy_A          167 ------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-  209 (283)
T ss_dssp             -----------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC-
T ss_pred             ------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCC-
Confidence                                                0122358889999999988888889999999999999999986 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||.. .+..+....+........ ......+..+.+||.+||..||++|||++++++||||+..
T Consensus       210 --------p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          210 --------PFLG-ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             --------TTCC-SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             --------CCCC-cchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence                    8876 555566666655433221 2234578899999999999999999999999999999964

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1e-37  Score=298.87  Aligned_cols=245  Identities=19%  Similarity=0.259  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEe--CCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLV--GEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+......||+|.+...   ..+.+.+|+.++++++ |+||+++++++..  ....+++|||+.+++|
T Consensus        44 lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l  120 (330)
T 3nsz_A           44 LGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF  120 (330)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCH
T ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhH
Confidence            68999999999988888889999988633   3467899999999996 9999999999987  5678999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++..  +++..++.++.|++.||.|||+++++||||||+||+++.++ .++|+|||  .+......            
T Consensus       121 ~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg--~a~~~~~~------------  184 (330)
T 3nsz_A          121 KQLYQT--LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG--LAEFYHPG------------  184 (330)
T ss_dssp             HHHGGG--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCT--TCEECCTT------------
T ss_pred             HHHHHh--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCC--CceEcCCC------------
Confidence            998865  89999999999999999999999999999999999999776 89999999  33311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (330)
T 3nsz_A          185 --------------------------------------------------------------------------------  184 (330)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......||+.|+|||++.+ ..+...+|+||+|+++|+|++|..       
T Consensus       185 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~-------  229 (330)
T 3nsz_A          185 ----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-------  229 (330)
T ss_dssp             ----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS-------
T ss_pred             ----------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCC-------
Confidence                                        01223468889999999877 556688999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhC-------------CCCC---------------------cchhhhhcHHHHHHHHHhhhhh
Q psy9736         316 LIPYLFILSCRQALYLIATN-------------KKPE---------------------IKEKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~-------------~~~~---------------------~~~~~~~s~~~~dli~~~L~~d  361 (400)
                        ||....+..+.+..+...             ....                     ...+..+++.+.+||++||+.|
T Consensus       230 --p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  307 (330)
T 3nsz_A          230 --PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD  307 (330)
T ss_dssp             --SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSS
T ss_pred             --CcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCC
Confidence              886544444444333221             0000                     0011226889999999999999


Q ss_pred             hhhhhcHHHHhcCccccccC
Q psy9736         362 VETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~  381 (400)
                      |++|||++|+|+||||+...
T Consensus       308 P~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          308 HQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             GGGSCCHHHHHTSGGGTTCC
T ss_pred             cccCCCHHHHhcCccHhhhc
Confidence            99999999999999999753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=8.2e-38  Score=291.91  Aligned_cols=247  Identities=19%  Similarity=0.227  Sum_probs=197.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.++.||.+.+......|++|.+....   ....+.+.+|+.+++.++|+||+++++++...+..++++||+++++|
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   98 (276)
T 2h6d_A           19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL   98 (276)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             ecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcH
Confidence            588999999999887777888888875432   22346789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.......           
T Consensus        99 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg--~~~~~~~~~-----------  165 (276)
T 2h6d_A           99 FDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG--LSNMMSDGE-----------  165 (276)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCC--GGGCCCC-------------
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecc--cccccCCCc-----------
Confidence            999875 478999999999999999999999999999999999999999999999999  333111000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (276)
T 2h6d_A          166 --------------------------------------------------------------------------------  165 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ......||+.|+|||++.+..+. ..+|.|++|+++|+|++|..       
T Consensus       166 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~-------  209 (276)
T 2h6d_A          166 -----------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL-------  209 (276)
T ss_dssp             ----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSC-------
T ss_pred             -----------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCC-------
Confidence                                         01123578899999999887654 68999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                        ||.. .+.......+..+.. .+  +..++..+.+||.+||+.||++|||++++++||||+...+
T Consensus       210 --p~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          210 --PFDD-EHVPTLFKKIRGGVF-YI--PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCC-CC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             --CCCC-CcHHHHHHHhhcCcc-cC--chhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence              8866 455555555555432 22  3347889999999999999999999999999999987543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=3.3e-38  Score=296.48  Aligned_cols=249  Identities=23%  Similarity=0.352  Sum_probs=194.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-h-HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-K-KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~-~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+......||+|.+...... . .+.+.++...++.++|+||+++++++..++..++||||++ ++|.
T Consensus        15 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~   93 (290)
T 3fme_A           15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLD   93 (290)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHH
T ss_pred             cCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchH
Confidence            58999999999998888889999988654322 2 2334445555777899999999999999999999999996 4887


Q ss_pred             HHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVTE-----TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++..     ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.++|+|||  .+.......       
T Consensus        94 ~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~-------  164 (290)
T 3fme_A           94 KFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG--ISGYLVDDV-------  164 (290)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-------------------
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC--Ccccccccc-------
Confidence            77653     3799999999999999999999998 99999999999999999999999999  443111110       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (290)
T 3fme_A          165 --------------------------------------------------------------------------------  164 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce----ecCCCCcccCCCCccchhhhhcCCCC
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV----LDKNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                       ......||+.|+|||++    .+..++..+|.||+|+++|+|++|..
T Consensus       165 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  211 (290)
T 3fme_A          165 ---------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF  211 (290)
T ss_dssp             --------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSC
T ss_pred             ---------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCC
Confidence                                             01222578889999986    44556678999999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                               ||..................+... ...+++.+.+||.+||+.||++|||++++++||||+....
T Consensus       212 ---------p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          212 ---------PYDSWGTPFQQLKQVVEEPSPQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             ---------SSCCCSCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             ---------CccccCchHHHHHHHhccCCCCcc-cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence                     887655666666666666555443 3458889999999999999999999999999999996443

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.2e-38  Score=302.40  Aligned_cols=248  Identities=20%  Similarity=0.312  Sum_probs=194.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCC--CCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKH--PNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+.. ...||+|.+.....  ...+.+.+|+.++++++|  +||+++++++..+...++|||+. +++
T Consensus        17 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~   94 (343)
T 3dbq_A           17 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NID   94 (343)
T ss_dssp             ESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred             EecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC-CCC
Confidence            6999999999997743 56788888764432  234678999999999976  99999999999999999999955 789


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.|++.||.|||+.+|+||||||+||+++ ++.++|+|||  ++.........        
T Consensus        95 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG--~a~~~~~~~~~--------  163 (343)
T 3dbq_A           95 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFG--IANQMQPDTTS--------  163 (343)
T ss_dssp             HHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCS--SSCCC--------------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecc--cccccCccccc--------
Confidence            99998764 799999999999999999999999999999999999996 6889999999  44322111100        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (343)
T 3dbq_A          164 --------------------------------------------------------------------------------  163 (343)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----------CCCCcccCCCCccchhhhhc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----------KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                   .......||+.|+|||++.+           ..+...+|+||+|+++|||+
T Consensus       164 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell  214 (343)
T 3dbq_A          164 -----------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  214 (343)
T ss_dssp             -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence                                         00223468888999998864           45567899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      +|..         ||....+....+..+..... ....+...+..+.+||.+||+.||++|||++++|+||||+..
T Consensus       215 ~g~~---------pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          215 YGKT---------PFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HSSC---------TTTTCCSHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             hCCC---------cchhhhhHHHHHHHHhcCCc-ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            9987         88775565566655554322 222233456789999999999999999999999999999853

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=8.7e-38  Score=295.41  Aligned_cols=249  Identities=16%  Similarity=0.258  Sum_probs=201.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+......||+|.+....   ....+++.+|+.++++++|+||+++++++..++..++||||+++++|
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L   98 (294)
T 4eqm_A           19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL   98 (294)
T ss_dssp             EEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             EccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCH
Confidence            589999999999888888888999875432   23346789999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++... .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+........          
T Consensus        99 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~----------  166 (294)
T 4eqm_A           99 SEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFG--IAKALSETSL----------  166 (294)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCS--SSTTC---------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCC--Cccccccccc----------
Confidence            9999754 69999999999999999999999999999999999999999999999999  4431111000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (294)
T 4eqm_A          167 --------------------------------------------------------------------------------  166 (294)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+..+...+|.||+|+++|+|++|..        
T Consensus       167 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~--------  210 (294)
T 4eqm_A          167 ----------------------------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP--------  210 (294)
T ss_dssp             ------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCC--------
Confidence                                        01223468999999999999888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                       ||.. .+.............+....  +.++++.+.++|.+||+.||++||+..+.+.+.|..-
T Consensus       211 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          211 -PFNG-ETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             -SSCS-SCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             -CCCC-CChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence             8877 55555555565554444322  2457889999999999999999997777777676553

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.8e-39  Score=304.78  Aligned_cols=251  Identities=21%  Similarity=0.233  Sum_probs=202.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~   73 (400)
                      ||+|+++.||++.+......||+|.+.....   ...+.+.+|+.++++++|+||+++++++....    ..|+||||++
T Consensus        20 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~   99 (311)
T 3ork_A           20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD   99 (311)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             EccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCC
Confidence            5899999999999888888999998865432   23457889999999999999999999987643    4599999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++|.+++.. +.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+..........    
T Consensus       100 g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~a~~~~~~~~~~----  173 (311)
T 3ork_A          100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG--IARAIADSGNSV----  173 (311)
T ss_dssp             EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCS--CC--------------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeecc--Cccccccccccc----
Confidence            9999999975 479999999999999999999999999999999999999999999999999  443221111000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (311)
T 3ork_A          174 --------------------------------------------------------------------------------  173 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.|++|+++|+|++|..    
T Consensus       174 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~----  217 (311)
T 3ork_A          174 --------------------------------TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP----  217 (311)
T ss_dssp             ----------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC----
Confidence                                            01223478999999999999888889999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                           ||.. .+.......+........ .....++..+.+||.+||+.||++||++.+++.|+|++.
T Consensus       218 -----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          218 -----PFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             -----SCCC-SSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             -----CCCC-CChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                 8877 566666666665543222 223458889999999999999999999999999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=9.8e-38  Score=306.95  Aligned_cols=249  Identities=20%  Similarity=0.316  Sum_probs=196.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCC--CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENK--HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+.. ...||+|.+....  ....+.+.+|+.++++++  |+||+++++++..++.+++|||+ .+++
T Consensus        64 LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~-~~~~  141 (390)
T 2zmd_A           64 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNID  141 (390)
T ss_dssp             EECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC-CSEE
T ss_pred             EccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEec-CCCC
Confidence            6899999999998765 6778888876543  234577899999999996  59999999999999999999995 5789


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.||+.||.|||+.+|+||||||+||+++ ++.++|+|||  ++.........        
T Consensus       142 L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG--~a~~~~~~~~~--------  210 (390)
T 2zmd_A          142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFG--IANQMQPDTTS--------  210 (390)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCS--SSCCC--------------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecC--ccccccCCCcc--------
Confidence            99998754 789999999999999999999999999999999999995 6899999999  44322111100        


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (390)
T 2zmd_A          211 --------------------------------------------------------------------------------  210 (390)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----------CCCCcccCCCCccchhhhhc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----------KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                   ......+||+.|+|||++.+           ..+...+|+||+|+++|||+
T Consensus       211 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell  261 (390)
T 2zmd_A          211 -----------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  261 (390)
T ss_dssp             --------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence                                         00223468889999998865           34567899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      +|..         ||....+....+..+..... ....+...+..+.+||++||+.||++|||+.|+|+||||+...
T Consensus       262 ~G~~---------Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          262 YGKT---------PFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             HSSC---------TTTTCCCHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             HCCC---------cchhhhHHHHHHHHHhCccc-cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            9987         88775555566666655422 1222333577899999999999999999999999999998643

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1e-37  Score=304.64  Aligned_cols=246  Identities=22%  Similarity=0.300  Sum_probs=196.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEE------EEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEEL------WVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~------~lv~e~~   72 (400)
                      ||+|+|+.||++.+...+..||+|.+.....  ...+.+.+|+.+++.++|+||+++++++...+..      +++|||+
T Consensus        50 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~  129 (371)
T 4exu_A           50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM  129 (371)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccc
Confidence            5899999999999888888999998865432  2357788999999999999999999999876543      9999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      . ++|.+.+.. .+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+.....         
T Consensus       130 ~-~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg--~a~~~~~---------  196 (371)
T 4exu_A          130 Q-TDLQKIMGM-EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG--LARHADA---------  196 (371)
T ss_dssp             C-EEHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTT--CC--------------
T ss_pred             c-ccHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecC--ccccccc---------
Confidence            6 588877754 48999999999999999999999999999999999999999999999999  3331100         


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       197 --------------------------------------------------------------------------------  196 (371)
T 4exu_A          197 --------------------------------------------------------------------------------  196 (371)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ......||+.|+|||++.+ ..+...+|.||+|+++|+|++|..   
T Consensus       197 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~---  240 (371)
T 4exu_A          197 ---------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT---  240 (371)
T ss_dssp             ------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSC---
T ss_pred             ---------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCC---
Confidence                                             0122367889999999887 666788999999999999999987   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCC-C--------------------------Cc-chhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKK-P--------------------------EI-KEKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~-~--------------------------~~-~~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+..+.+..+.+... +                          .+ ....++++.+.+||++||+.||+
T Consensus       241 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  313 (371)
T 4exu_A          241 ------LFKG-KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVD  313 (371)
T ss_dssp             ------SCCC-SSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTT
T ss_pred             ------CCCC-CChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChh
Confidence                  8866 444444444432100 0                          00 01124578999999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++|+|+||||+..+.
T Consensus       314 ~Rpt~~ell~hp~f~~~~~  332 (371)
T 4exu_A          314 KRLTAAQALTHPFFEPFRD  332 (371)
T ss_dssp             TSCCHHHHHTSGGGTTTCC
T ss_pred             hcCCHHHHhcCcccccCCC
Confidence            9999999999999986443

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=7.3e-38  Score=292.72  Aligned_cols=250  Identities=24%  Similarity=0.324  Sum_probs=205.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+......|++|.+....  ....+.+.+|+.++++++|+||+++++++..  +...++||||+++++
T Consensus        14 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~   93 (279)
T 2w5a_A           14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD   93 (279)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEE
T ss_pred             ccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCC
Confidence            588999999999888777888888876543  2345678999999999999999999998754  568999999999999


Q ss_pred             hHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          77 LTDVVTET-----CMDEGQIAAVCREVLQALEFLHSNQ-----VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        77 L~~~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |.+++...     .+++..++.++.|++.||.|||+.+     ++|+||||+||+++.++.++|+|||  .+........
T Consensus        94 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg--~~~~~~~~~~  171 (279)
T 2w5a_A           94 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG--LARILNHDTS  171 (279)
T ss_dssp             HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC--HHHHC---CH
T ss_pred             HHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc--hheeeccccc
Confidence            99998743     3999999999999999999999998     9999999999999999999999999  4442211110


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .                                                                               
T Consensus       172 ~-------------------------------------------------------------------------------  172 (279)
T 2w5a_A          172 F-------------------------------------------------------------------------------  172 (279)
T ss_dssp             H-------------------------------------------------------------------------------
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                              .....||+.|+|||++.+..+...+|.|++|+++|+|++|
T Consensus       173 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  212 (279)
T 2w5a_A          173 ----------------------------------------AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  212 (279)
T ss_dssp             ----------------------------------------HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHS
T ss_pred             ----------------------------------------ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence                                                    0112578899999999988888899999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                      ..         ||.. .+..+....+..+..+.+  +..++..+.+||.+||+.||++|||++++++|+|+....++
T Consensus       213 ~~---------p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  277 (279)
T 2w5a_A          213 MP---------PFTA-FSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH  277 (279)
T ss_dssp             SC---------SSCC-SSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGSC
T ss_pred             CC---------CCcc-cCHHHHHHHHhhcccccC--CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhccc
Confidence            76         7776 566666677777765544  33578899999999999999999999999999999976654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.7e-37  Score=300.23  Aligned_cols=260  Identities=18%  Similarity=0.223  Sum_probs=198.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.+...+..||+|.+..... .....+.+|+.++++++|+||+++++++..+     ...++++||+. 
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-   97 (353)
T 2b9h_A           19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-   97 (353)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-
T ss_pred             EcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-
Confidence            5899999999999888888999998864332 2356788999999999999999999887654     67899999996 


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++|.+++..+.+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+..........      
T Consensus        98 ~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg--~a~~~~~~~~~~------  169 (353)
T 2b9h_A           98 TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG--LARIIDESAADN------  169 (353)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT--TCEECC------------
T ss_pred             ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecc--cccccccccccc------
Confidence            599999988889999999999999999999999999999999999999999999999999  443221111100      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                         .            
T Consensus       170 -------------------------------------------------------------------~------------  170 (353)
T 2b9h_A          170 -------------------------------------------------------------------S------------  170 (353)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -------------------------------------------------------------------c------------
Confidence                                                                               0            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                              .............||+.|+|||++.. ..+...+|.||+|+++|+|++|..     
T Consensus       171 ------------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~-----  221 (353)
T 2b9h_A          171 ------------------------EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP-----  221 (353)
T ss_dssp             ---------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ------------------------CccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCC-----
Confidence                                    00000011234578999999998765 556688999999999999999986     


Q ss_pred             ccccCcchhhcHHHHHHHHHh--CCCC--------------------------Ccc-hhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIAT--NKKP--------------------------EIK-EKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~--~~~~--------------------------~~~-~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                          ||.. .+....+..+..  +.+.                          .+. ....+++.+.+||++||+.||++
T Consensus       222 ----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  296 (353)
T 2b9h_A          222 ----IFPG-RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK  296 (353)
T ss_dssp             ----SCCC-SSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGG
T ss_pred             ----CCCC-CCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCccc
Confidence                7766 333333333221  1000                          000 01347889999999999999999


Q ss_pred             hhcHHHHhcCccccccCC
Q psy9736         365 RASASLLLKHPFLKIARP  382 (400)
Q Consensus       365 R~s~~~~l~hp~~~~~~~  382 (400)
                      |||++++|+||||+....
T Consensus       297 Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          297 RITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             SCCHHHHHTSGGGTTTCC
T ss_pred             CCCHHHHhcCccccccCC
Confidence            999999999999997543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3.1e-38  Score=301.96  Aligned_cols=257  Identities=22%  Similarity=0.274  Sum_probs=199.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+......||+|.+.....        .....+.+|+.++++++|+||+++++++..+. .++||||+
T Consensus        18 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~   96 (322)
T 2ycf_A           18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELM   96 (322)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECC
T ss_pred             EecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecC
Confidence            5899999999998888888899998754321        12345789999999999999999999987655 89999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc---eEEeccchhhhhhhccccchh
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      ++++|.+++.. ..+++..++.++.|++.||.|||+++++||||||+||+++.++.   ++|+|||  .+........  
T Consensus        97 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg--~~~~~~~~~~--  172 (322)
T 2ycf_A           97 EGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--HSKILGETSL--  172 (322)
T ss_dssp             TTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT--TCEECCCCHH--
T ss_pred             CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc--cceecccccc--
Confidence            99999998865 47999999999999999999999999999999999999987654   9999999  4331111000  


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (322)
T 2ycf_A          173 --------------------------------------------------------------------------------  172 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                            .....||+.|+|||++.   ...+...+|.||+|+++|+|++
T Consensus       173 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~  214 (322)
T 2ycf_A          173 --------------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  214 (322)
T ss_dssp             --------------------------------------HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHH
T ss_pred             --------------------------------------cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHh
Confidence                                                  11225788899999874   3455578999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                      |..         ||............+..+.....+. +..++..+.+||.+||+.||++|||++++|+||||+......
T Consensus       215 g~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~~~  285 (322)
T 2ycf_A          215 GYP---------PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR  285 (322)
T ss_dssp             SSC---------SSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHHHH
T ss_pred             CCC---------CCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHHHH
Confidence            987         8866443333444455554333322 345788999999999999999999999999999998755443


Q ss_pred             Ccchh
Q psy9736         385 SLTPL  389 (400)
Q Consensus       385 ~l~~~  389 (400)
                      ....+
T Consensus       286 ~~~~~  290 (322)
T 2ycf_A          286 KFQDL  290 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            33333

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=303.41  Aligned_cols=248  Identities=17%  Similarity=0.262  Sum_probs=202.6

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.     +......||+|.+.... ......+.+|+.++++++|+||+++++++..+...++||||+++
T Consensus        79 LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~  158 (367)
T 3l9p_A           79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG  158 (367)
T ss_dssp             CCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCC
Confidence            6999999999988     55677889999986442 33456788999999999999999999999988899999999999


Q ss_pred             CChHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC---ceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET--------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG---SVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~--------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~---~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...        .+++..++.++.|++.||.|||+++|+||||||+||+++.++   .++|+|||  .+.....
T Consensus       159 g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG--~a~~~~~  236 (367)
T 3l9p_A          159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG--MARDIYR  236 (367)
T ss_dssp             EEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH--HHHHHHH
T ss_pred             CCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc--ccccccc
Confidence            9999999753        489999999999999999999999999999999999999655   59999999  4442211


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       237 ~~~~~---------------------------------------------------------------------------  241 (367)
T 3l9p_A          237 AGYYR---------------------------------------------------------------------------  241 (367)
T ss_dssp             HSSCT---------------------------------------------------------------------------
T ss_pred             ccccc---------------------------------------------------------------------------
Confidence            11000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......||+.|+|||++.+..+...+|+||+|+++|||
T Consensus       242 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el  279 (367)
T 3l9p_A          242 ------------------------------------------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI  279 (367)
T ss_dssp             ------------------------------------------TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------------cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                                                      12234678899999999988888999999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ++ |..         ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++|||++++++|.+.-.
T Consensus       280 lt~g~~---------pf~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          280 FSLGYM---------PYPS-KSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             HTTSCC---------SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            98 765         7766 666777777776654433  3457889999999999999999999999999987653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.4e-37  Score=304.92  Aligned_cols=243  Identities=21%  Similarity=0.250  Sum_probs=191.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC------------------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------------------   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------------------   62 (400)
                      ||+|+|+.|+++.+..++..||+|.+......    ..+|+.+++.++|+||++++++|...                  
T Consensus        15 lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   90 (383)
T 3eb0_A           15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLG   90 (383)
T ss_dssp             EECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------------------
T ss_pred             EEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccc
Confidence            68999999999998888889999987644322    34799999999999999999998543                  


Q ss_pred             --------------------CEEEEEEeccCCCChHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCC
Q psy9736          63 --------------------EELWVVMEYLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKS  117 (400)
Q Consensus        63 --------------------~~~~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp  117 (400)
                                          ...++||||++ ++|.+.+..     ..+++..++.++.|++.||.|||+.||+||||||
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp  169 (383)
T 3eb0_A           91 GKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP  169 (383)
T ss_dssp             -------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCG
T ss_pred             ccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCH
Confidence                                34889999996 587776653     4699999999999999999999999999999999


Q ss_pred             CceEec-CCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchh
Q psy9736         118 DNILLG-LDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIV  196 (400)
Q Consensus       118 ~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
                      +||+++ .++.++|+|||  .+......                                                    
T Consensus       170 ~Nil~~~~~~~~kl~Dfg--~a~~~~~~----------------------------------------------------  195 (383)
T 3eb0_A          170 QNLLVNSKDNTLKLCDFG--SAKKLIPS----------------------------------------------------  195 (383)
T ss_dssp             GGEEEETTTTEEEECCCT--TCEECCTT----------------------------------------------------
T ss_pred             HHEEEcCCCCcEEEEECC--CCcccCCC----------------------------------------------------
Confidence            999998 67999999999  43311000                                                    


Q ss_pred             hhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCcc
Q psy9736         197 NYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTS  276 (400)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  276 (400)
                                                                                          .......||+.|
T Consensus       196 --------------------------------------------------------------------~~~~~~~~t~~y  207 (383)
T 3eb0_A          196 --------------------------------------------------------------------EPSVAYICSRFY  207 (383)
T ss_dssp             --------------------------------------------------------------------SCCCCCCCCSSC
T ss_pred             --------------------------------------------------------------------CCCcCcccCCCc
Confidence                                                                                012234678899


Q ss_pred             CCCcceecCC-CCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCC-CC----------------
Q psy9736         277 LPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNK-KP----------------  338 (400)
Q Consensus       277 ~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~-~~----------------  338 (400)
                      +|||++.+.. ++..+|+||+|+++|||++|..         ||.. .+..+.+..+.+.. .+                
T Consensus       208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~---------pf~~-~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~  277 (383)
T 3eb0_A          208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKP---------LFSG-ETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVR  277 (383)
T ss_dssp             CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC---------SSCC-SSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CC
T ss_pred             cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC---------CCCC-CChHHHHHHHHHHhCCCCHHHHHHhCccccccc
Confidence            9999988754 6788999999999999999986         7776 55555555554310 00                


Q ss_pred             --Ccc-------hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         339 --EIK-------EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       339 --~~~-------~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                        .+.       .+...+..+.+||.+||+.||++|||+.|+|+||||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          278 FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             CCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence              000       122367789999999999999999999999999999863

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=9.8e-38  Score=306.06  Aligned_cols=293  Identities=19%  Similarity=0.167  Sum_probs=195.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC--------CCCcccccceeE----eCCEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK--------HPNIVNYLDSYL----VGEELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~~~~~~~----~~~~~~lv   68 (400)
                      ||+|+|+.||++.+......||+|.+... ....+.+.+|+.+++.++        |+||+++++++.    .....++|
T Consensus        45 lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv  123 (397)
T 1wak_A           45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMV  123 (397)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEE
T ss_pred             eeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEE
Confidence            58999999999988888889999998643 334577899999999985        788999999987    44589999


Q ss_pred             EeccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          69 MEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        69 ~e~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      |||+ ++++.+.+..   ..+++..++.++.||+.||.|||++ ||+||||||+||+++.++.....+++  ........
T Consensus       124 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~--~~~~~~~~  200 (397)
T 1wak_A          124 FEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA--EATEWQRS  200 (397)
T ss_dssp             ECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH--HHC-----
T ss_pred             Eecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh--hhHHHhhc
Confidence            9999 5566665543   3599999999999999999999998 99999999999999988643333332  11100000


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      ...         ...++....+|.......                                                  
T Consensus       201 ~~~---------~~~~~~~~~~~~~~~~~~--------------------------------------------------  221 (397)
T 1wak_A          201 GAP---------PPSGSAVSTAPATAGNFL--------------------------------------------------  221 (397)
T ss_dssp             -------------------------CCTTS--------------------------------------------------
T ss_pred             CCC---------CCCCCccccCCccccccc--------------------------------------------------
Confidence            000         000011111111000000                                                  


Q ss_pred             cccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhc
Q psy9736         225 WYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~  304 (400)
                        ..+         ..........++..|||........   .....||+.|+|||++.+..+...+|+||+|+++|||+
T Consensus       222 --~~~---------~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  287 (397)
T 1wak_A          222 --VNP---------LEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELA  287 (397)
T ss_dssp             --CCT---------TSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred             --ccc---------cccccccccceEecccccccccccc---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHh
Confidence              000         0001112234566666655433222   34457899999999999998889999999999999999


Q ss_pred             CCCCcccccccccCcchhh--------cHHHHHHHHHhCCCCC------------------------------------c
Q psy9736         305 GPHKWSFQPHFLIPYLFIL--------SCRQALYLIATNKKPE------------------------------------I  340 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~--------~~~~~~~~i~~~~~~~------------------------------------~  340 (400)
                      +|..         ||....        ........+....+..                                    .
T Consensus       288 tg~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (397)
T 1wak_A          288 TGDY---------LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKY  358 (397)
T ss_dssp             HSSC---------SCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTS
T ss_pred             hCCC---------CCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhc
Confidence            9987         775421        1122222222111100                                    0


Q ss_pred             chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         341 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       341 ~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ..+...+..+.+||.+||+.||++|||++|+|+||||++
T Consensus       359 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          359 EWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            012335678999999999999999999999999999973

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=7.5e-39  Score=313.30  Aligned_cols=237  Identities=12%  Similarity=0.051  Sum_probs=182.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHH---HHhCCCCCccccc-------ceeEeCC----
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILV---MRENKHPNIVNYL-------DSYLVGE----   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~---l~~l~h~niv~~~-------~~~~~~~----   63 (400)
                      ||+|+|+.||++.+...+..||+|.+...   .....+.+.+|+.+   +++++|+||++++       +++...+    
T Consensus        81 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~  160 (377)
T 3byv_A           81 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKM  160 (377)
T ss_dssp             EEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSE
T ss_pred             eecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccc
Confidence            58999999999998888888999988632   33356788999954   4555899999998       5554432    


Q ss_pred             -------------EEEEEEeccCCCChHHHHhhc-CCCH-------HHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe
Q psy9736          64 -------------ELWVVMEYLPGGSLTDVVTET-CMDE-------GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL  122 (400)
Q Consensus        64 -------------~~~lv~e~~~~~~L~~~i~~~-~l~~-------~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~  122 (400)
                                   ..+++|||+ +|+|.+++... .+++       ..+..++.|++.||.|||+++|+||||||+||++
T Consensus       161 ~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll  239 (377)
T 3byv_A          161 IRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL  239 (377)
T ss_dssp             EEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             cccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence                         278999999 67999999752 3444       7888899999999999999999999999999999


Q ss_pred             cCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhh
Q psy9736         123 GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSY  202 (400)
Q Consensus       123 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (400)
                      +.++.++|+|||  ++.....    .                                                      
T Consensus       240 ~~~~~~kL~DFG--~a~~~~~----~------------------------------------------------------  259 (377)
T 3byv_A          240 DQRGGVFLTGFE--HLVRDGA----R------------------------------------------------------  259 (377)
T ss_dssp             CTTCCEEECCGG--GCEETTC----E------------------------------------------------------
T ss_pred             cCCCCEEEEech--hheecCC----c------------------------------------------------------
Confidence            999999999999  4331100    0                                                      


Q ss_pred             ccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce
Q psy9736         203 LVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV  282 (400)
Q Consensus       203 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  282 (400)
                                                                                      ....+| +.|+|||++
T Consensus       260 ----------------------------------------------------------------~~~~~g-~~y~aPE~~  274 (377)
T 3byv_A          260 ----------------------------------------------------------------VVSSVS-RGFEPPELE  274 (377)
T ss_dssp             ----------------------------------------------------------------EECCCC-TTCCCHHHH
T ss_pred             ----------------------------------------------------------------ccCCCC-cCccChhhh
Confidence                                                                            112356 788888888


Q ss_pred             ecC-----------CCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHH
Q psy9736         283 LDK-----------NKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQ  351 (400)
Q Consensus       283 ~~~-----------~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~  351 (400)
                      .+.           .++..+|+||+|+++|||++|..         ||.. .+.......+...       ...+++.+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~---------Pf~~-~~~~~~~~~~~~~-------~~~~~~~~~  337 (377)
T 3byv_A          275 ARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL---------PITK-DAALGGSEWIFRS-------CKNIPQPVR  337 (377)
T ss_dssp             HHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC---------CC-------CCSGGGGSS-------CCCCCHHHH
T ss_pred             cccccccccccccccCChhhhHHHHHHHHHHHHHCCC---------CCcc-cccccchhhhhhh-------ccCCCHHHH
Confidence            877           77789999999999999999987         8765 2222222212111       234778999


Q ss_pred             HHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         352 DFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       352 dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      +||.+||+.||++|||+.++++||||+..
T Consensus       338 ~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          338 ALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             HHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             HHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            99999999999999999999999999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5e-37  Score=299.82  Aligned_cols=243  Identities=15%  Similarity=0.241  Sum_probs=198.1

Q ss_pred             CCcceEEEEEecCC-------CceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDD-------RRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-------~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+|+.||++.+       ...+..||+|.+..... ...+.+.+|+.+++.+ +|+||+++++++..++..|+||||
T Consensus        89 LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~  168 (370)
T 2psq_A           89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  168 (370)
T ss_dssp             ESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEc
Confidence            68999999998853       34567899998865432 3456789999999999 899999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||
T Consensus       169 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG  248 (370)
T 2psq_A          169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG  248 (370)
T ss_dssp             CTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCS
T ss_pred             CCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEcccc
Confidence            9999999998753                 37889999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        ++........                                                                    
T Consensus       249 --~a~~~~~~~~--------------------------------------------------------------------  258 (370)
T 2psq_A          249 --LARDINNIDY--------------------------------------------------------------------  258 (370)
T ss_dssp             --SCEETTCCCT--------------------------------------------------------------------
T ss_pred             --CCcccCcccc--------------------------------------------------------------------
Confidence              4331110000                                                                    


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                       ........||+.|+|||++.+..+...+|.|
T Consensus       259 -------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw  289 (370)
T 2psq_A          259 -------------------------------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW  289 (370)
T ss_dssp             -------------------------------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred             -------------------------------------------------eecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence                                                             0011223578899999999998888999999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+|+++|||++ |..         ||.. .+..+....+..+..+..  +..++..+.+||++||+.||++|||+.|+++
T Consensus       290 slG~il~ellt~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          290 SFGVLMWEIFTLGGS---------PYPG-IPVEELFKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             HHHHHHHHHHTTSCC---------SSTT-CCGGGHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCC---------CCCC-CCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999998 765         7766 455555555666654443  3457889999999999999999999999987


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       358 ~  358 (370)
T 2psq_A          358 D  358 (370)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.2e-37  Score=285.72  Aligned_cols=240  Identities=19%  Similarity=0.225  Sum_probs=199.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.+.. ..+||+|.+..... ..+.+.+|+.++++++|+||+++++++..++..+++|||+++++|.++
T Consensus        18 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (269)
T 4hcu_A           18 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   95 (269)
T ss_dssp             EEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             ecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHH
Confidence            5889999999987653 45688888865443 457799999999999999999999999998999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........          
T Consensus        96 l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~~----------  163 (269)
T 4hcu_A           96 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG--MTRFVLDDQYTS----------  163 (269)
T ss_dssp             HHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTT--GGGGBCCHHHHS----------
T ss_pred             HHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccc--cccccccccccc----------
Confidence            9753  58999999999999999999999999999999999999999999999999  444221111000          


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (269)
T 4hcu_A          164 --------------------------------------------------------------------------------  163 (269)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                  .....+|+.|+|||++.+..+...+|.||+|+++|+|++ |..         
T Consensus       164 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~---------  206 (269)
T 4hcu_A          164 ----------------------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI---------  206 (269)
T ss_dssp             ----------------------------TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC---------
T ss_pred             ----------------------------ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCC---------
Confidence                                        112256778999999998888899999999999999999 776         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+..+....+..+.....  +...+..+.+||.+||+.||++|||+.++++|
T Consensus       207 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          207 PYEN-RSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TTTT-CCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHhcCccCCC--CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            7766 666677777776644433  34478899999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=294.46  Aligned_cols=249  Identities=20%  Similarity=0.234  Sum_probs=199.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC--EEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE--ELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+.... ....+.+.+|+.++++++|+||+++++++....  ..++||||+++++|
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L   96 (319)
T 4euu_A           17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL   96 (319)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBH
T ss_pred             ecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCH
Confidence            589999999999988888889999876433 234567889999999999999999999988654  78999999999999


Q ss_pred             HHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe----cCCCceEEeccchhhhhhhccccchhh
Q psy9736          78 TDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL----GLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        78 ~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+++...    .+++..++.++.|++.||.|||+.+|+||||||+||++    +..+.++|+|||  .+.......    
T Consensus        97 ~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg--~a~~~~~~~----  170 (319)
T 4euu_A           97 YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG--AARELEDDE----  170 (319)
T ss_dssp             HHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCT--TCEECCTTC----
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCC--CceecCCCC----
Confidence            9999753    39999999999999999999999999999999999999    777889999999  433111000    


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (319)
T 4euu_A          171 --------------------------------------------------------------------------------  170 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee--------cCCCCcccCCCCccchhh
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL--------DKNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~d~~s~g~~~~  301 (400)
                                                          ......||+.|+|||++.        ...++..+|+||+|+++|
T Consensus       171 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~  214 (319)
T 4euu_A          171 ------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY  214 (319)
T ss_dssp             ------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHH
T ss_pred             ------------------------------------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHH
Confidence                                                012336888899999876        455668899999999999


Q ss_pred             hhcCCCCcccccccccCcchh---hcHHHHHHHHHhCCCCCc----------------------chhhhhcHHHHHHHHH
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFI---LSCRQALYLIATNKKPEI----------------------KEKEKLSQIFQDFLDQ  356 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~---~~~~~~~~~i~~~~~~~~----------------------~~~~~~s~~~~dli~~  356 (400)
                      ||++|..         ||...   ....+.+..+..+.++..                      .....++..+.+||++
T Consensus       215 el~~g~~---------pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  285 (319)
T 4euu_A          215 HAATGSL---------PFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLAN  285 (319)
T ss_dssp             HHHHSSC---------SEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHH
T ss_pred             HHHhCCC---------CCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHH
Confidence            9999987         88642   334566666666543211                      1123467789999999


Q ss_pred             hhhhhhhhhhcHHHHhcCcccccc
Q psy9736         357 CLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       357 ~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ||+.||++|||++|+|+||-=..+
T Consensus       286 ~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          286 ILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             HSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             hccCChhhhccHHHhhhccHHHhh
Confidence            999999999999999999864443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.2e-37  Score=303.71  Aligned_cols=244  Identities=22%  Similarity=0.238  Sum_probs=188.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+..... |++|++......    ..+|+.+++.++|+||++++++|...+      ..++||||+++
T Consensus        48 lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~  122 (394)
T 4e7w_A           48 IGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE  122 (394)
T ss_dssp             EEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE
T ss_pred             EeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc
Confidence            5899999999998766655 777776543321    247999999999999999999986543      48899999976


Q ss_pred             CChHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec-CCCceEEeccchhhhhhhccccchh
Q psy9736          75 GSLTDVVT-----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        75 ~~L~~~i~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                       ++...+.     ...+++..++.++.|++.||.|||+++|+||||||+||+++ .++.++|+|||  .+......    
T Consensus       123 -~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG--~a~~~~~~----  195 (394)
T 4e7w_A          123 -TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG--SAKILIAG----  195 (394)
T ss_dssp             -EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT--TCEECCTT----
T ss_pred             -cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCC--CcccccCC----
Confidence             4444333     34799999999999999999999999999999999999999 78999999999  44311000    


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       196 --------------------------------------------------------------------------------  195 (394)
T 4e7w_A          196 --------------------------------------------------------------------------------  195 (394)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                          .......||+.|+|||++.+. .++..+|+||+||++|||++|.
T Consensus       196 ------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          196 ------------------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             ------------------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                                012234688999999998765 4668899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCC-CC------------------Cc-----c--hhhhhcHHHHHHHHHhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNK-KP------------------EI-----K--EKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~-~~------------------~~-----~--~~~~~s~~~~dli~~~L~~d  361 (400)
                      .         ||.. .+..+.+..+.+.. .+                  .+     .  .+..+++.+.+||.+||+.|
T Consensus       240 ~---------pf~~-~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (394)
T 4e7w_A          240 P---------LFPG-ESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT  309 (394)
T ss_dssp             C---------SSCC-SSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             C---------CCCC-CCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCC
Confidence            6         8876 55555555554320 00                  00     0  01236789999999999999


Q ss_pred             hhhhhcHHHHhcCccccccCC
Q psy9736         362 VETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~~  382 (400)
                      |++|||+.|+++||||+..+.
T Consensus       310 P~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          310 PSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             GGGSCCHHHHHTSGGGSTTTS
T ss_pred             hhhCCCHHHHhcChhhhhhcc
Confidence            999999999999999997543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=3.9e-37  Score=298.22  Aligned_cols=246  Identities=21%  Similarity=0.293  Sum_probs=195.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||+|+++.||++.+...+..||+|.+....  ....+++.+|+.+++.++|+||+++++++....      ..+++|||+
T Consensus        32 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~  111 (353)
T 3coi_A           32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM  111 (353)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccc
Confidence            589999999999988888899999886533  223567889999999999999999999998654      359999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      . ++|.+++.. .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||  .+.....         
T Consensus       112 ~-~~l~~~~~~-~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~---------  178 (353)
T 3coi_A          112 Q-TDLQKIMGL-KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG--LARHADA---------  178 (353)
T ss_dssp             S-EEGGGTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTT--CTTC------------
T ss_pred             c-CCHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecc--cccCCCC---------
Confidence            6 588877754 48999999999999999999999999999999999999999999999999  3331100         


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (353)
T 3coi_A          179 --------------------------------------------------------------------------------  178 (353)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ......||+.|+|||++.+ ..+...+|.||+|+++|+|++|..   
T Consensus       179 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~---  222 (353)
T 3coi_A          179 ---------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT---  222 (353)
T ss_dssp             --------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSC---
T ss_pred             ---------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCC---
Confidence                                             0112367889999998876 566688999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCC---------------------------CCCc-chhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNK---------------------------KPEI-KEKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~---------------------------~~~~-~~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+..+.+..+.+..                           .+.+ .....++..+.+||.+||+.||+
T Consensus       223 ------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~  295 (353)
T 3coi_A          223 ------LFKG-KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVD  295 (353)
T ss_dssp             ------SSBS-SCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTT
T ss_pred             ------CCCC-CCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcc
Confidence                  8766 44444444443210                           0000 11134688999999999999999


Q ss_pred             hhhcHHHHhcCccccccCC
Q psy9736         364 TRASASLLLKHPFLKIARP  382 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|||++++|+||||+..+.
T Consensus       296 ~Rpt~~e~l~hp~f~~~~~  314 (353)
T 3coi_A          296 KRLTAAQALTHPFFEPFRD  314 (353)
T ss_dssp             TSCCHHHHHTSGGGTTTCC
T ss_pred             cCCCHHHHhcCcchhhccC
Confidence            9999999999999986543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.2e-37  Score=298.73  Aligned_cols=253  Identities=19%  Similarity=0.242  Sum_probs=192.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-----------chHHHHHHHHHHHHhCCCCCcccccceeEe-----CCE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-----------PKKELIINEILVMRENKHPNIVNYLDSYLV-----GEE   64 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-----------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~~   64 (400)
                      ||+|+++.||++.+.. +..||+|.+.....           ...+.+.+|+.++++++|+||+++++++..     ...
T Consensus        30 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  108 (362)
T 3pg1_A           30 ISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHK  108 (362)
T ss_dssp             EEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCE
T ss_pred             eccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcce
Confidence            5899999999997765 67788887754321           123778999999999999999999999854     347


Q ss_pred             EEEEEeccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          65 LWVVMEYLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        65 ~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      .++||||+. ++|.+.+...  .+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+....
T Consensus       109 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~~~~~~  185 (362)
T 3pg1_A          109 LYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN--LAREDT  185 (362)
T ss_dssp             EEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTT--C-----
T ss_pred             EEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecC--cccccc
Confidence            899999996 5888877644  69999999999999999999999999999999999999999999999999  333110


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ...                                                                             
T Consensus       186 ~~~-----------------------------------------------------------------------------  188 (362)
T 3pg1_A          186 ADA-----------------------------------------------------------------------------  188 (362)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~  301 (400)
                                                                 ......||+.|+|||++.+ ..+...+|.||+|+++|
T Consensus       189 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  225 (362)
T 3pg1_A          189 -------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA  225 (362)
T ss_dssp             --------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             -------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHH
Confidence                                                       0123367888999998877 55668899999999999


Q ss_pred             hhcCCCCcccccccccCcchhhcHHHHHHHHHhC-CCCCcc----------------------------hhhhhcHHHHH
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFILSCRQALYLIATN-KKPEIK----------------------------EKEKLSQIFQD  352 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~----------------------------~~~~~s~~~~d  352 (400)
                      +|++|..         ||.. .+..+.+..+... ..+...                            .....++.+.+
T Consensus       226 ~l~~g~~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (362)
T 3pg1_A          226 EMFNRKA---------LFRG-STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALD  295 (362)
T ss_dssp             HHHHSSC---------SCCC-SSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHH
T ss_pred             HHHhCCC---------CCCC-CCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHH
Confidence            9999986         7766 4444444444321 001000                            11235678999


Q ss_pred             HHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcc
Q psy9736         353 FLDQCLEEEVETRASASLLLKHPFLKIARPLASLT  387 (400)
Q Consensus       353 li~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~  387 (400)
                      ||.+||+.||++|||++++|+||||+....+..+.
T Consensus       296 li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~  330 (362)
T 3pg1_A          296 LIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLT  330 (362)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGT
T ss_pred             HHHHHhcCChhhCCCHHHHHcCchhhhccCccccc
Confidence            99999999999999999999999999866554444

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=4.2e-37  Score=293.99  Aligned_cols=249  Identities=15%  Similarity=0.201  Sum_probs=187.4

Q ss_pred             CCcceEEEEEecCCCceeE---EEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEE------EEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFS---KILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEEL------WVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~---~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~------~lv~   69 (400)
                      ||+|+++.||++.+.....   +||+|.+...  .....+.+.+|+.++++++|+||+++++++......      ++++
T Consensus        31 lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~  110 (323)
T 3qup_A           31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL  110 (323)
T ss_dssp             EEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEE
T ss_pred             ecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEE
Confidence            5899999999998766653   7899988654  334567899999999999999999999999876544      9999


Q ss_pred             eccCCCChHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          70 EYLPGGSLTDVVTET-------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        70 e~~~~~~L~~~i~~~-------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      ||+.+++|.+++...       .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+....
T Consensus       111 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg--~a~~~~  188 (323)
T 3qup_A          111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG--LSRKIY  188 (323)
T ss_dssp             ECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC--C-----
T ss_pred             EeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecc--cccccc
Confidence            999999999988632       48999999999999999999999999999999999999999999999999  443221


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ......                                                                          
T Consensus       189 ~~~~~~--------------------------------------------------------------------------  194 (323)
T 3qup_A          189 SGDYYR--------------------------------------------------------------------------  194 (323)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccc--------------------------------------------------------------------------
Confidence            111000                                                                          


Q ss_pred             cccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhh
Q psy9736         223 ELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~  302 (400)
                                                                 ......+|+.|+|||++.+..++..+|+||+|+++|+
T Consensus       195 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  231 (323)
T 3qup_A          195 -------------------------------------------QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE  231 (323)
T ss_dssp             -------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             -------------------------------------------ccccccCcccccCchhhcCCCCCCccchhhHHHHHHH
Confidence                                                       0112246788999999999888899999999999999


Q ss_pred             hcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-------HHHHhcC
Q psy9736         303 FLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-------ASLLLKH  374 (400)
Q Consensus       303 ~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-------~~~~l~h  374 (400)
                      |++ |..         ||.. .+..+....+..+.....  +..+++.+.+||.+||+.||++|||       .+++++|
T Consensus       232 ll~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          232 IMTRGQT---------PYAG-IENAEIYNYLIGGNRLKQ--PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHTTSCC---------TTTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHhCCCC---------Cccc-cChHHHHHHHhcCCCCCC--CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            999 765         7766 555556666666544333  3457889999999999999999999       7788999


Q ss_pred             cccccc
Q psy9736         375 PFLKIA  380 (400)
Q Consensus       375 p~~~~~  380 (400)
                      ||+...
T Consensus       300 ~~~~~~  305 (323)
T 3qup_A          300 LSVLST  305 (323)
T ss_dssp             ------
T ss_pred             hhhcCC
Confidence            999863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.7e-37  Score=299.04  Aligned_cols=248  Identities=20%  Similarity=0.289  Sum_probs=195.0

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC----cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ----QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++..   ......||+|.+....    ....+.+.+|+.+++.+ +|+||+++++++..+...++||||+
T Consensus        62 lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~  141 (355)
T 1vzo_A           62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI  141 (355)
T ss_dssp             EEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             eccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecC
Confidence            58899999988754   2455677777765321    22345577899999999 7999999999999999999999999


Q ss_pred             CCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++++|.+++.. ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..........   
T Consensus       142 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG--~a~~~~~~~~~~---  216 (355)
T 1vzo_A          142 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG--LSKEFVADETER---  216 (355)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSS--EEEECCGGGGGG---
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCC--CCeecccCCCCc---
Confidence            99999999875 479999999999999999999999999999999999999999999999999  443221111100   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       217 --------------------------------------------------------------------------------  216 (355)
T 1vzo_A          217 --------------------------------------------------------------------------------  216 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--CCCCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--KNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ....+||+.|+|||++.+  ..+...+|+|++|+++|||++|.. 
T Consensus       217 -----------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~-  260 (355)
T 1vzo_A          217 -----------------------------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS-  260 (355)
T ss_dssp             -----------------------------------GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC-
T ss_pred             -----------------------------------ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCC-
Confidence                                               123468899999999885  334578899999999999999987 


Q ss_pred             ccccccccCcchh---hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFI---LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~---~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                              ||...   .........+....++ +  +..++..+.+||.+||..||++||     |++++++||||+..
T Consensus       261 --------pf~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          261 --------PFTVDGEKNSQAEISRRILKSEPP-Y--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             --------TTSCTTSCCCHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             --------CCccCCccchHHHHHHHHhccCCC-C--CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence                    88642   2234444444444332 2  345788999999999999999999     99999999999853

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6e-37  Score=288.14  Aligned_cols=248  Identities=19%  Similarity=0.300  Sum_probs=203.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+......|++|.+....  ....+.+.+|+.++++++|+||+++++++...+..++++||+++++|.
T Consensus        30 lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  109 (287)
T 2wei_A           30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF  109 (287)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHH
Confidence            588999999999887777788888875432  234677899999999999999999999999999999999999999998


Q ss_pred             HHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhccccchhhccccc
Q psy9736          79 DVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        79 ~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+.. ..+++..++.++.|++.||.|||+.+++|+||||+||+++.+   +.++|+|||  .+.......         
T Consensus       110 ~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg--~~~~~~~~~---------  178 (287)
T 2wei_A          110 DEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG--LSTCFQQNT---------  178 (287)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTT--GGGTBCCCS---------
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccC--cceeecCCC---------
Confidence            88764 579999999999999999999999999999999999999764   469999999  433111000         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (287)
T 2wei_A          179 --------------------------------------------------------------------------------  178 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                     ......||+.|+|||++.+. +...+|.|++|+++|+|++|..      
T Consensus       179 -------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~------  220 (287)
T 2wei_A          179 -------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTP------  220 (287)
T ss_dssp             -------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             -------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCC------
Confidence                                           01223577889999988764 6688999999999999999986      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCC-CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         315 FLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                         ||.. .+..+....+..+.. ...+....++..+.+||++||+.||++|||++++|+||||+...
T Consensus       221 ---p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          221 ---PFYG-KNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             ---SSCC-SSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence               8876 566666666666643 23344456889999999999999999999999999999998643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.7e-36  Score=284.23  Aligned_cols=240  Identities=19%  Similarity=0.250  Sum_probs=196.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||.+... ....||+|.+..... ..+.+.+|+.++++++|+||+++++++..++..++||||+++++|.++
T Consensus        32 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (283)
T 3gen_A           32 LGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY  109 (283)
T ss_dssp             CC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHH
T ss_pred             cCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHH
Confidence            699999999998765 345688888865443 457789999999999999999999999998999999999999999999


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+..........          
T Consensus       110 l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg--~~~~~~~~~~~~----------  177 (283)
T 3gen_A          110 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG--LSRYVLDDEYTS----------  177 (283)
T ss_dssp             HHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTT--GGGGBCCHHHHS----------
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccc--cccccccccccc----------
Confidence            975  479999999999999999999999999999999999999999999999999  443221111000          


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       178 --------------------------------------------------------------------------------  177 (283)
T 3gen_A          178 --------------------------------------------------------------------------------  177 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                  .....+|+.|+|||++....+...+|.|++|+++|+|++ |..         
T Consensus       178 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~---------  220 (283)
T 3gen_A          178 ----------------------------SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------  220 (283)
T ss_dssp             ----------------------------TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCC---------
T ss_pred             ----------------------------ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC---------
Confidence                                        112246788999999998888889999999999999998 876         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+.......+..+.....  +...++.+.+||++||+.||++|||++++++|
T Consensus       221 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          221 PYER-FTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             TTTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             Cccc-cChhHHHHHHhcccCCCC--CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            7776 566666666766644333  34468899999999999999999999999986

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-36  Score=290.09  Aligned_cols=248  Identities=21%  Similarity=0.328  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||+++..  ...||+|.+.....  ...+.+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus        45 lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  122 (309)
T 3p86_A           45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY  122 (309)
T ss_dssp             EEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHH
T ss_pred             eecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHH
Confidence            589999999998653  45677777654432  23467889999999999999999999999999999999999999999


Q ss_pred             HHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          79 DVVTET----CMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        79 ~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++...    .+++..+..++.|++.||.|||+.+  ++||||||+||+++.++.++|+|||  ++.......       
T Consensus       123 ~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg--~a~~~~~~~-------  193 (309)
T 3p86_A          123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG--LSRLKASTF-------  193 (309)
T ss_dssp             HHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------------------
T ss_pred             HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCC--CCccccccc-------
Confidence            999754    3899999999999999999999999  9999999999999999999999999  433110000       


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (309)
T 3p86_A          194 --------------------------------------------------------------------------------  193 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|.||+|+++|+|++|..    
T Consensus       194 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~----  237 (309)
T 3p86_A          194 --------------------------------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ----  237 (309)
T ss_dssp             ----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCC----
T ss_pred             --------------------------------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCC----
Confidence                                            00223468999999999999888899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc--CccccccCCC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK--HPFLKIARPL  383 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~--hp~~~~~~~~  383 (400)
                           ||.. .+..+....+... ....+  +..+++.+.+||++||+.||++|||++++++  +++++...++
T Consensus       238 -----Pf~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          238 -----PWGN-LNPAQVVAAVGFKCKRLEI--PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             -----TTTT-SCHHHHHHHHHHSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             -----CCCC-CCHHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence                 8876 5555555555433 22222  4558899999999999999999999999987  6777765443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=292.45  Aligned_cols=249  Identities=19%  Similarity=0.256  Sum_probs=197.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC----cchHHHHHHHHHHHHhCCCCCcccccceeE--eCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ----QPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||.+.+......|++|.+....    ....+.+.+|+.++++++|+||+++++++.  .....++||||+++
T Consensus        13 lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   92 (305)
T 2wtk_C           13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC   92 (305)
T ss_dssp             EEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSE
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccC
Confidence            588999999999888888888888876432    234577899999999999999999999984  44578999999976


Q ss_pred             CChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          75 GSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        75 ~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      + +.+++..   ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+.........    
T Consensus        93 ~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg--~~~~~~~~~~~----  165 (305)
T 2wtk_C           93 G-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALG--VAEALHPFAAD----  165 (305)
T ss_dssp             E-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECCTTCSS----
T ss_pred             C-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccc--cccccCccccc----
Confidence            5 6666653   469999999999999999999999999999999999999999999999999  33311100000    


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (305)
T 2wtk_C          166 --------------------------------------------------------------------------------  165 (305)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC--CcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK--NQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                       .......||+.|+|||++.+...  ...+|.|++|+++|+|++|.. 
T Consensus       166 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~-  211 (305)
T 2wtk_C          166 ---------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY-  211 (305)
T ss_dssp             ---------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSC-
T ss_pred             ---------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCC-
Confidence                                             00123358889999998876433  357899999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                              ||.. .+..+....+.++... +  +..++..+.+||.+||+.||++|||++++++||||+...+
T Consensus       212 --------p~~~-~~~~~~~~~i~~~~~~-~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          212 --------PFEG-DNIYKLFENIGKGSYA-I--PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             --------SCCC-SSHHHHHHHHHHCCCC-C--CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             --------CCCC-chHHHHHHHHhcCCCC-C--CCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence                    8876 5566666666665432 2  3357889999999999999999999999999999997554

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=5.3e-37  Score=304.62  Aligned_cols=244  Identities=18%  Similarity=0.193  Sum_probs=190.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+......||+|++.....    ...+|+.+++.++|+||++++++|...      ...++||||+++
T Consensus        62 lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~  137 (420)
T 1j1b_A           62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE  137 (420)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE
T ss_pred             EeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc
Confidence            6899999999999888888899998754332    234799999999999999999988542      246799999965


Q ss_pred             CChHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchh
Q psy9736          75 GSLTDVVT-----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        75 ~~L~~~i~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                       ++.+.+.     ...+++..++.++.||+.||.|||+.+|+||||||+||+++.+ +.++|+|||  ++......    
T Consensus       138 -~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG--~a~~~~~~----  210 (420)
T 1j1b_A          138 -TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRG----  210 (420)
T ss_dssp             -EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCT--TCEECCTT----
T ss_pred             -cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccch--hhhhcccC----
Confidence             6666554     2469999999999999999999999999999999999999965 668999999  44311000    


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (420)
T 1j1b_A          211 --------------------------------------------------------------------------------  210 (420)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCC
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                          .......||+.|+|||++.+. .+...+|+||+||++|||++|.
T Consensus       211 ------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~  254 (420)
T 1j1b_A          211 ------------------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  254 (420)
T ss_dssp             ------------------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence                                                012234689999999998764 5678899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhC--CC-----------------CCcc-------hhhhhcHHHHHHHHHhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATN--KK-----------------PEIK-------EKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~--~~-----------------~~~~-------~~~~~s~~~~dli~~~L~~d  361 (400)
                      .         ||.. .+..+.+..+.+.  .+                 +.+.       .+...+..+.+||++||++|
T Consensus       255 ~---------pf~~-~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~d  324 (420)
T 1j1b_A          255 P---------IFPG-DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT  324 (420)
T ss_dssp             C---------SSCC-SSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSS
T ss_pred             C---------CCCC-CCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCC
Confidence            6         8876 5555555555431  00                 0000       01235788999999999999


Q ss_pred             hhhhhcHHHHhcCccccccC
Q psy9736         362 VETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~  381 (400)
                      |++|||+.|+++||||+..+
T Consensus       325 P~~R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          325 PTARLTPLEACAHSFFDELR  344 (420)
T ss_dssp             GGGSCCHHHHHTSGGGGGGG
T ss_pred             hhHCCCHHHHhCCHhhcccc
Confidence            99999999999999998643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.1e-37  Score=289.55  Aligned_cols=260  Identities=18%  Similarity=0.283  Sum_probs=190.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe-------------CCEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV-------------GEELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------------~~~~~l   67 (400)
                      ||+|+++.||.+.+......|++|.+... ....+.+.+|+.++++++|+||+++++++..             ....++
T Consensus        14 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (303)
T 1zy4_A           14 LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFI   92 (303)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEE
T ss_pred             eccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEE
Confidence            58999999999988888888999987543 2345778999999999999999999998764             357899


Q ss_pred             EEeccCCCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          68 VMEYLPGGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        68 v~e~~~~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      ||||+++++|.+++...  .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+.......
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg--~~~~~~~~~  170 (303)
T 1zy4_A           93 QMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG--LAKNVHRSL  170 (303)
T ss_dssp             EEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC--CCSCTTC--
T ss_pred             EEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc--chhhccccc
Confidence            99999999999999753  57889999999999999999999999999999999999999999999999  443221111


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ....                 .                                    ..                .   
T Consensus       171 ~~~~-----------------~------------------------------------~~----------------~---  178 (303)
T 1zy4_A          171 DILK-----------------L------------------------------------DS----------------Q---  178 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             chhc-----------------c------------------------------------cc----------------c---
Confidence            0000                 0                                    00                0   


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~  304 (400)
                                                       .............||+.|+|||++.+. .+...+|.|++|+++|+|+
T Consensus       179 ---------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  225 (303)
T 1zy4_A          179 ---------------------------------NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI  225 (303)
T ss_dssp             ------------------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHH
T ss_pred             ---------------------------------cccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHH
Confidence                                             000001113345789999999999864 5668899999999999998


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcc--hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIK--EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ++            |....+.......+..... .++  .....+..+.+||++||+.||++|||++++++||||+...
T Consensus       226 ~p------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          226 YP------------FSTGMERVNILKKLRSVSI-EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             SC------------CSSHHHHHHHHHHHHSTTC-CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             hc------------cCCchhHHHHHHhcccccc-ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence            63            3222333344444433321 111  1234667899999999999999999999999999998643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.6e-37  Score=297.21  Aligned_cols=244  Identities=18%  Similarity=0.258  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCC-EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGE-ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~   72 (400)
                      ||+|+|+.||++.     +......||+|.+..... ...+.+.+|+.+++++ +|+||+++++++...+ ..+++|||+
T Consensus        30 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~  109 (359)
T 3vhe_A           30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  109 (359)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECC
T ss_pred             ecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEec
Confidence            5899999999997     677778999999875433 2346789999999999 8899999999988754 589999999


Q ss_pred             CCCChHHHHhhcC-------------------------------------------------------------------
Q psy9736          73 PGGSLTDVVTETC-------------------------------------------------------------------   85 (400)
Q Consensus        73 ~~~~L~~~i~~~~-------------------------------------------------------------------   85 (400)
                      ++++|.+++....                                                                   
T Consensus       110 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (359)
T 3vhe_A          110 KFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDF  189 (359)
T ss_dssp             TTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTC
T ss_pred             CCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccc
Confidence            9999999987431                                                                   


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceee
Q psy9736          86 MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYT  165 (400)
Q Consensus        86 l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  165 (400)
                      +++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+.........                  
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg--~a~~~~~~~~~------------------  249 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG--LARDIYKDPDY------------------  249 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCG--GGSCTTSCTTC------------------
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEecc--ceeeecccccc------------------
Confidence            8899999999999999999999999999999999999999999999999  44311111000                  


Q ss_pred             ehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCC
Q psy9736         166 AIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSS  245 (400)
Q Consensus       166 ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (400)
                                                                                                      
T Consensus       250 --------------------------------------------------------------------------------  249 (359)
T 3vhe_A          250 --------------------------------------------------------------------------------  249 (359)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccccCcchhhc
Q psy9736         246 ASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILS  324 (400)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~  324 (400)
                                         .......||+.|+|||++.+..+...+|+||+|+++|||++ |..         ||.....
T Consensus       250 -------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~---------p~~~~~~  301 (359)
T 3vhe_A          250 -------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS---------PYPGVKI  301 (359)
T ss_dssp             -------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC---------SSTTCCC
T ss_pred             -------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCC---------CCCccch
Confidence                               00123367889999999998888899999999999999998 876         8877444


Q ss_pred             HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         325 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       325 ~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      .......+..+.....  +..+++.+.+||.+||+.||++|||++++++|
T Consensus       302 ~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          302 DEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             SHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            4555555555544433  34578899999999999999999999999986

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=296.60  Aligned_cols=254  Identities=18%  Similarity=0.271  Sum_probs=196.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+......|++|.+........+.+.+|+.++++++|+||+++++++..++..++||||+++++|.++
T Consensus        18 lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (310)
T 3s95_A           18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI   97 (310)
T ss_dssp             EECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred             ecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHH
Confidence            68999999999998888889999988666666678899999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........          
T Consensus        98 l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~~----------  165 (310)
T 3s95_A           98 IKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFG--LARLMVDEKTQP----------  165 (310)
T ss_dssp             HHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCT--TCEECC----------------
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecc--cceecccccccc----------
Confidence            986  479999999999999999999999999999999999999999999999999  443221111110          


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                               +.                                                    ..               
T Consensus       166 ---------~~----------------------------------------------------~~---------------  169 (310)
T 3s95_A          166 ---------EG----------------------------------------------------LR---------------  169 (310)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---------cc----------------------------------------------------cc---------------
Confidence                     00                                                    00               


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                         ..............||+.|+|||++.+..+...+|+||+|+++|||++|..         |
T Consensus       170 -------------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~---------~  221 (310)
T 3s95_A          170 -------------------SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN---------A  221 (310)
T ss_dssp             -----------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCC---------S
T ss_pred             -------------------cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCC---------C
Confidence                               000000112345689999999999999888899999999999999999865         4


Q ss_pred             cchhhcH-----HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         319 YLFILSC-----RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       319 ~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                      +......     ...........      +.++++.+.+||.+||+.||++|||++++++  ||+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~  278 (310)
T 3s95_A          222 DPDYLPRTMDFGLNVRGFLDRYC------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLE  278 (310)
T ss_dssp             STTTSCBCTTSSBCHHHHHHHTC------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHH
T ss_pred             CcchhhhHHHHhhhhhccccccC------CCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHH
Confidence            4331100     00000111111      2235668999999999999999999999987  554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=3.6e-38  Score=307.70  Aligned_cols=246  Identities=12%  Similarity=0.088  Sum_probs=176.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhC--CCCCccccc-------ceeEeC------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMREN--KHPNIVNYL-------DSYLVG------   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l--~h~niv~~~-------~~~~~~------   62 (400)
                      ||+|+|+.||++.+......||+|.+.....   ...+.+.+|+.+++.+  +|+||++++       +++...      
T Consensus        70 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~  149 (371)
T 3q60_A           70 LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFA  149 (371)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSS
T ss_pred             ccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCee
Confidence            5899999999999888888999998876543   2356677885555544  699988755       344332      


Q ss_pred             -----------CEEEEEEeccCCCChHHHHhhc--CCCHHHH------HHHHHHHHHHHHHHHhCCeecCCCCCCceEec
Q psy9736          63 -----------EELWVVMEYLPGGSLTDVVTET--CMDEGQI------AAVCREVLQALEFLHSNQVIHRDIKSDNILLG  123 (400)
Q Consensus        63 -----------~~~~lv~e~~~~~~L~~~i~~~--~l~~~~~------~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~  123 (400)
                                 ..+|+||||++ ++|.+++...  .+++...      ..++.|++.||.|||+++|+||||||+||+++
T Consensus       150 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~  228 (371)
T 3q60_A          150 QLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM  228 (371)
T ss_dssp             BCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEC
T ss_pred             eccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEEC
Confidence                       34899999997 7999999753  4555555      67779999999999999999999999999999


Q ss_pred             CCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhc
Q psy9736         124 LDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYL  203 (400)
Q Consensus       124 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (400)
                      .++.++|+|||  ++.......                                                          
T Consensus       229 ~~~~~kL~DFG--~a~~~~~~~----------------------------------------------------------  248 (371)
T 3q60_A          229 PDGRLMLGDVS--ALWKVGTRG----------------------------------------------------------  248 (371)
T ss_dssp             TTSCEEECCGG--GEEETTCEE----------------------------------------------------------
T ss_pred             CCCCEEEEecc--eeeecCCCc----------------------------------------------------------
Confidence            99999999999  443111100                                                          


Q ss_pred             cccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee
Q psy9736         204 VGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL  283 (400)
Q Consensus       204 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  283 (400)
                                                                                      ....||+.|+|||++.
T Consensus       249 ----------------------------------------------------------------~~~~~t~~y~aPE~~~  264 (371)
T 3q60_A          249 ----------------------------------------------------------------PASSVPVTYAPREFLN  264 (371)
T ss_dssp             ----------------------------------------------------------------EGGGSCGGGCCHHHHT
T ss_pred             ----------------------------------------------------------------cCccCCcCCcChhhcc
Confidence                                                                            0124568899999887


Q ss_pred             c--CCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHH-----HHhCCCCCcchhhhhcHHHHHHHHH
Q psy9736         284 D--KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYL-----IATNKKPEIKEKEKLSQIFQDFLDQ  356 (400)
Q Consensus       284 ~--~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~s~~~~dli~~  356 (400)
                      +  ..++..+|+||+|+++|||++|..         ||............     .........+...++++.+.+||.+
T Consensus       265 ~~~~~~~~~~DiwSlG~il~elltg~~---------Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  335 (371)
T 3q60_A          265 ASTATFTHALNAWQLGLSIYRVWCLFL---------PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGR  335 (371)
T ss_dssp             CSEEECCHHHHHHHHHHHHHHHHHSSC---------STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHH
T ss_pred             CCCCCcCccccHHHHHHHHHHHHhCCC---------CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHH
Confidence            6  667788999999999999999987         87663211100000     0001112222334678899999999


Q ss_pred             hhhhhhhhhhcHHHHhcCcccccc
Q psy9736         357 CLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       357 ~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ||+.||++|||++++|+||||++.
T Consensus       336 ~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          336 FLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             HTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             HcCCChhhCCCHHHHhcCHHHHHH
Confidence            999999999999999999999864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=3e-37  Score=297.82  Aligned_cols=246  Identities=18%  Similarity=0.232  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-----------------HHHHHHHHHHHHhCCCCCcccccceeEeCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-----------------KELIINEILVMRENKHPNIVNYLDSYLVGE   63 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-----------------~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~   63 (400)
                      ||+|+++.||.+.+  .+..||+|.+.......                 .+.+.+|+.++++++|+||+++++++..++
T Consensus        39 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  116 (348)
T 2pml_X           39 LNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYD  116 (348)
T ss_dssp             EECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSS
T ss_pred             EcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCC
Confidence            58898889988876  56677777765332111                 177899999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHH------Hhh---cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEecc
Q psy9736          64 ELWVVMEYLPGGSLTDV------VTE---TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKW  133 (400)
Q Consensus        64 ~~~lv~e~~~~~~L~~~------i~~---~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~df  133 (400)
                      ..++||||+++++|.++      +..   ..+++..++.++.|++.||.|||+ .|++|+||||+||+++.++.++|+||
T Consensus       117 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~df  196 (348)
T 2pml_X          117 EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF  196 (348)
T ss_dssp             EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCC
T ss_pred             eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEecc
Confidence            99999999999999998      553   469999999999999999999999 99999999999999999999999999


Q ss_pred             chhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeee
Q psy9736         134 NRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVN  213 (400)
Q Consensus       134 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (400)
                      |  .+......                                                                     
T Consensus       197 g--~~~~~~~~---------------------------------------------------------------------  205 (348)
T 2pml_X          197 G--ESEYMVDK---------------------------------------------------------------------  205 (348)
T ss_dssp             T--TCEECBTT---------------------------------------------------------------------
T ss_pred             c--cccccccc---------------------------------------------------------------------
Confidence            9  33311000                                                                     


Q ss_pred             ecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCc-cc
Q psy9736         214 YLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQ-TT  291 (400)
Q Consensus       214 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~  291 (400)
                                                                          ......||+.|+|||++.+. .+.. .+
T Consensus       206 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~  233 (348)
T 2pml_X          206 ----------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKV  233 (348)
T ss_dssp             ----------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHH
T ss_pred             ----------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchh
Confidence                                                                01223678899999998876 4444 89


Q ss_pred             CCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-----------------hhhhcHHHHHHH
Q psy9736         292 PPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-----------------KEKLSQIFQDFL  354 (400)
Q Consensus       292 d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-----------------~~~~s~~~~dli  354 (400)
                      |+|++|+++|+|++|..         ||.......+....+..+... .+.                 ...++..+.+||
T Consensus       234 Di~slG~il~~l~~g~~---------pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  303 (348)
T 2pml_X          234 DIWSLGICLYVMFYNVV---------PFSLKISLVELFNNIRTKNIE-YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFL  303 (348)
T ss_dssp             HHHHHHHHHHHHHHSSC---------SSCCSSCSHHHHHHHTSCCCC-CCCSSSSSTTTTCC--------CCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCC---------CCCCCCcHHHHHHHHhccCcC-CccchhhhhccccccccccchhhcCHHHHHHH
Confidence            99999999999999987         887744435666666555322 211                 145788999999


Q ss_pred             HHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         355 DQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       355 ~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      .+||+.||++|||++++++||||+...
T Consensus       304 ~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          304 KLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHccCChhhCCCHHHHhcCccccCCC
Confidence            999999999999999999999999754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=6.3e-37  Score=293.52  Aligned_cols=245  Identities=20%  Similarity=0.242  Sum_probs=191.6

Q ss_pred             CCcceEEEEEecCC-CceeEEEEeccccccCcchHHHHHHHHHHHHhCCCC------CcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDD-RRFFSKILSNPITLAQQPKKELIINEILVMRENKHP------NIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~------niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+++.||++.+ ......||+|.+... ....+.+.+|+.+++.++|+      +++++++++..++..++||||+ 
T Consensus        22 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-   99 (339)
T 1z57_A           22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-   99 (339)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-
T ss_pred             EecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-
Confidence            58999999999876 445678899987543 23457788999999988654      5999999999999999999999 


Q ss_pred             CCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-------------------CCceEEe
Q psy9736          74 GGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-------------------DGSVKLS  131 (400)
Q Consensus        74 ~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-------------------~~~~~l~  131 (400)
                      +++|.+++...   .+++..+..++.|++.||.|||+++++||||||+||+++.                   ++.++|+
T Consensus       100 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  179 (339)
T 1z57_A          100 GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV  179 (339)
T ss_dssp             CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEEC
T ss_pred             CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEe
Confidence            88999988754   5889999999999999999999999999999999999987                   5678899


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+...    .                                                                 
T Consensus       180 Dfg--~~~~~----~-----------------------------------------------------------------  188 (339)
T 1z57_A          180 DFG--SATYD----D-----------------------------------------------------------------  188 (339)
T ss_dssp             CCS--SCEET----T-----------------------------------------------------------------
T ss_pred             eCc--ccccC----c-----------------------------------------------------------------
Confidence            998  33210    0                                                                 


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                           .......||+.|+|||++.+..+...+
T Consensus       189 -----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~  215 (339)
T 1z57_A          189 -----------------------------------------------------EHHSTLVSTRHYRAPEVILALGWSQPC  215 (339)
T ss_dssp             -----------------------------------------------------SCCCSSCSCGGGCCHHHHTTSCCCTHH
T ss_pred             -----------------------------------------------------cccccccCCccccChHHhhCCCCCcch
Confidence                                                                 002234689999999999988888999


Q ss_pred             CCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHH---HhCCCCC-----------------------------
Q psy9736         292 PPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLI---ATNKKPE-----------------------------  339 (400)
Q Consensus       292 d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i---~~~~~~~-----------------------------  339 (400)
                      |.||+|+++|||++|..         ||.. .+..+....+   ....+..                             
T Consensus       216 Di~slG~il~el~~g~~---------pf~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
T 1z57_A          216 DVWSIGCILIEYYLGFT---------VFPT-HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS  285 (339)
T ss_dssp             HHHHHHHHHHHHHHSSC---------SCCC-SCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHH
T ss_pred             hhHHHHHHHHHHHhCCC---------CCCC-CChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhh
Confidence            99999999999999976         7765 3333322222   1111100                             


Q ss_pred             ---------cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         340 ---------IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       340 ---------~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                               .......++.+.+||++||+.||++|||++|+++||||+..+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          286 RACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             hcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence                     000112356789999999999999999999999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.1e-36  Score=295.17  Aligned_cols=248  Identities=19%  Similarity=0.177  Sum_probs=183.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-------EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-------ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-------~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+...+..||+|.+..... ..+...+|+..++.++|+||+++++++...+       ..++||||++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~  109 (360)
T 3e3p_A           31 AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP  109 (360)
T ss_dssp             --------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCS
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccc
Confidence            6999999999999888888899998754332 2344677888889999999999999987533       3889999997


Q ss_pred             CCChHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHH--hCCeecCCCCCCceEecC-CCceEEeccchhhhhhhcccc
Q psy9736          74 GGSLTDVVT-----ETCMDEGQIAAVCREVLQALEFLH--SNQVIHRDIKSDNILLGL-DGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        74 ~~~L~~~i~-----~~~l~~~~~~~i~~qi~~~l~~lH--~~~ivH~dikp~nil~~~-~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      + ++...+.     ...+++..+..++.|++.|+.|||  +.+|+||||||+||+++. ++.++|+|||  .+...... 
T Consensus       110 ~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg--~a~~~~~~-  185 (360)
T 3e3p_A          110 D-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG--SAKKLSPS-  185 (360)
T ss_dssp             C-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT--TCBCCCTT-
T ss_pred             c-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC--CceecCCC-
Confidence            6 5544333     236899999999999999999999  999999999999999997 8999999999  33311100 


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (360)
T 3e3p_A          186 --------------------------------------------------------------------------------  185 (360)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhc
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~  304 (400)
                                                             .......||+.|+|||++.+.. +...+|+||+|+++|+|+
T Consensus       186 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell  226 (360)
T 3e3p_A          186 ---------------------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM  226 (360)
T ss_dssp             ---------------------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             ---------------------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence                                                   0122346889999999986644 668899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCC----------------------cc-------hhhhhcHHHHHHHH
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPE----------------------IK-------EKEKLSQIFQDFLD  355 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~----------------------~~-------~~~~~s~~~~dli~  355 (400)
                      +|..         ||.. .+....+..+.+.....                      .+       .....+..+.+||.
T Consensus       227 ~g~~---------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  296 (360)
T 3e3p_A          227 LGEP---------IFRG-DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLS  296 (360)
T ss_dssp             HSSC---------SSCC-SSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHH
T ss_pred             hCCC---------CcCC-CChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHH
Confidence            9986         8876 55555555554320000                      00       00114678999999


Q ss_pred             HhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         356 QCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       356 ~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +||+.||++|||+.|+|+||||+....
T Consensus       297 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          297 ALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             HHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             HHhccCccccCCHHHHhcCccccccCC
Confidence            999999999999999999999997543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.7e-37  Score=293.18  Aligned_cols=243  Identities=15%  Similarity=0.206  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||.+...   .....||+|.+.... ....+.+.+|+.++++++|+||+++++++..++..++||||+++++
T Consensus        57 lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  136 (325)
T 3kul_A           57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS  136 (325)
T ss_dssp             EEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCB
T ss_pred             EEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCc
Confidence            588999999888664   344568888886542 3345778999999999999999999999998889999999999999


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++..  ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  .+..........      
T Consensus       137 L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg--~a~~~~~~~~~~------  208 (325)
T 3kul_A          137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG--LSRVLEDDPDAA------  208 (325)
T ss_dssp             HHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS--SCEECC----CC------
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC--cccccccCccce------
Confidence            9999964  379999999999999999999999999999999999999999999999999  443221111000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (325)
T 3kul_A          209 --------------------------------------------------------------------------------  208 (325)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    .......+|+.|+|||++.+..+...+|+||+|+++|||++ |..     
T Consensus       209 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~-----  253 (325)
T 3kul_A          209 ------------------------------YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER-----  253 (325)
T ss_dssp             ------------------------------EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred             ------------------------------eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC-----
Confidence                                          00112246788999999998888889999999999999998 876     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++|||+.++++
T Consensus       254 ----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          254 ----PYWN-MTNRDVISSVEEGYRLPA--PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ----TTTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----Cccc-CCHHHHHHHHHcCCCCCC--CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                8876 666667777766644333  4458889999999999999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=7.9e-37  Score=299.48  Aligned_cols=244  Identities=18%  Similarity=0.151  Sum_probs=192.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CC-----CcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HP-----NIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+......||+|.+.... ...+.+.+|+.+++.+. |+     +|+++++++...+..++||||+. 
T Consensus        62 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-  139 (382)
T 2vx3_A           62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-  139 (382)
T ss_dssp             EEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-
T ss_pred             EeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-
Confidence            689999999999888888889999986432 24566788999998874 55     48999999999999999999995 


Q ss_pred             CChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH--hCCeecCCCCCCceEec--CCCceEEeccchhhhhhhccccch
Q psy9736          75 GSLTDVVTET---CMDEGQIAAVCREVLQALEFLH--SNQVIHRDIKSDNILLG--LDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        75 ~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH--~~~ivH~dikp~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      ++|.+++...   .+++..++.++.|++.||.|||  +.+|+||||||+||+++  .++.++|+|||  ++.....    
T Consensus       140 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG--~a~~~~~----  213 (382)
T 2vx3_A          140 YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQ----  213 (382)
T ss_dssp             CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT--TCEETTC----
T ss_pred             CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc--Cceeccc----
Confidence            5999988753   5899999999999999999999  46999999999999995  47889999999  3331100    


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       214 --------------------------------------------------------------------------------  213 (382)
T 2vx3_A          214 --------------------------------------------------------------------------------  213 (382)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                            ......||+.|+|||++.+..++..+|+||+|+++|||++|.
T Consensus       214 --------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  255 (382)
T 2vx3_A          214 --------------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE  255 (382)
T ss_dssp             --------------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                                  012346889999999999988889999999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCCCCcch----------------------------------h----------
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE----------------------------------K----------  343 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~----------------------------------~----------  343 (400)
                      .         ||.. .+..+.+..+..........                                  +          
T Consensus       256 ~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  325 (382)
T 2vx3_A          256 P---------LFSG-ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILG  325 (382)
T ss_dssp             C---------SSCC-SSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHT
T ss_pred             C---------CCCC-CCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhh
Confidence            6         7776 55555555554321000000                                  0          


Q ss_pred             -----------------hhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         344 -----------------EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       344 -----------------~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                                       ...++.+.+||++||+.||++|||++|+|+||||+..
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          326 VETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             ccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                             0012478999999999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-36  Score=292.30  Aligned_cols=242  Identities=16%  Similarity=0.280  Sum_probs=200.1

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+.     .....||+|.+..... ...+.+.+|+.++++++|+||+++++++..++..++||||+++
T Consensus        55 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  134 (343)
T 1luf_A           55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY  134 (343)
T ss_dssp             EEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCC
Confidence            588999999998765     4457899998875432 3357789999999999999999999999998999999999999


Q ss_pred             CChHHHHhh-------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          75 GSLTDVVTE-------------------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        75 ~~L~~~i~~-------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      ++|.+++..                         ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++
T Consensus       135 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~k  214 (343)
T 1luf_A          135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVK  214 (343)
T ss_dssp             CBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             CcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEE
Confidence            999999875                         4689999999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  .+..........                                                             
T Consensus       215 l~Dfg--~~~~~~~~~~~~-------------------------------------------------------------  231 (343)
T 1luf_A          215 IADFG--LSRNIYSADYYK-------------------------------------------------------------  231 (343)
T ss_dssp             ECCCS--CHHHHTGGGCBC-------------------------------------------------------------
T ss_pred             EeecC--CCcccccCcccc-------------------------------------------------------------
Confidence            99999  443221110000                                                             


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                              ......||+.|+|||++.+..+..
T Consensus       232 --------------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~  255 (343)
T 1luf_A          232 --------------------------------------------------------ADGNDAIPIRWMPPESIFYNRYTT  255 (343)
T ss_dssp             ------------------------------------------------------------CCBCGGGCCHHHHHHCCCCH
T ss_pred             --------------------------------------------------------ccCCCcccceecChhhhccCCcCc
Confidence                                                                    012235788999999999888889


Q ss_pred             ccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         290 TTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      .+|.||+|+++|||++ |..         ||.. .+..+....+..+..+..  +..++..+.+||++||+.||++|||+
T Consensus       256 ~~Di~slG~il~el~t~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~  323 (343)
T 1luf_A          256 ESDVWAYGVVLWEIFSYGLQ---------PYYG-MAHEEVIYYVRDGNILAC--PENCPLELYNLMRLCWSKLPADRPSF  323 (343)
T ss_dssp             HHHHHHHHHHHHHHHTTTCC---------TTTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             ccccHHHHHHHHHHHhcCCC---------cCCC-CChHHHHHHHhCCCcCCC--CCCCCHHHHHHHHHHcccCcccCCCH
Confidence            9999999999999998 765         7776 666677777777655444  34578899999999999999999999


Q ss_pred             HHHhc
Q psy9736         369 SLLLK  373 (400)
Q Consensus       369 ~~~l~  373 (400)
                      .++++
T Consensus       324 ~~~~~  328 (343)
T 1luf_A          324 CSIHR  328 (343)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.5e-36  Score=282.39  Aligned_cols=240  Identities=17%  Similarity=0.225  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||++.... ...||+|.+..... ..+.+.+|+.++++++|+||+++++++..+...++||||+++++|.++
T Consensus        16 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (268)
T 3sxs_A           16 LGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY   93 (268)
T ss_dssp             EEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             eccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHH
Confidence            5889999999986653 45688888865443 456789999999999999999999999988999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........           
T Consensus        94 l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg--~~~~~~~~~~~-----------  160 (268)
T 3sxs_A           94 LRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG--MTRYVLDDQYV-----------  160 (268)
T ss_dssp             HHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTT--CEEECCTTCEE-----------
T ss_pred             HHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCc--cceecchhhhh-----------
Confidence            8753  59999999999999999999999999999999999999999999999999  33311110000           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (268)
T 3sxs_A          161 --------------------------------------------------------------------------------  160 (268)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                 ......+|+.|+|||++.+..+...+|.||+|+++|+|++ |..         
T Consensus       161 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~---------  204 (268)
T 3sxs_A          161 ---------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM---------  204 (268)
T ss_dssp             ---------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCC---------
T ss_pred             ---------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCC---------
Confidence                                       0112246778999999988777789999999999999998 876         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+.......+..+.....  +...++.+.+||++||+.||++|||+.++++|
T Consensus       205 p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          205 PYDL-YTNSEVVLKVSQGHRLYR--PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TTTT-SCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             Cccc-cChHHHHHHHHcCCCCCC--CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7766 566666666666654433  33478899999999999999999999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=287.77  Aligned_cols=249  Identities=21%  Similarity=0.340  Sum_probs=192.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc-h-HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP-K-KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~-~-~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++.+......||+|.+...... . .+.+..+..+++.++|+||+++++++..++..++||||+ ++.+.
T Consensus        33 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~  111 (318)
T 2dyl_A           33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAE  111 (318)
T ss_dssp             C------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHH
T ss_pred             eeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHH
Confidence            68999999999988878888999988654332 2 233444455677789999999999999999999999999 55666


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+...  ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||  .+.......          
T Consensus       112 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg--~~~~~~~~~----------  179 (318)
T 2dyl_A          112 KLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG--ISGRLVDDK----------  179 (318)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCT--TC-----------------
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECC--CchhccCCc----------
Confidence            55543  4799999999999999999999995 99999999999999999999999999  333111100          


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (318)
T 2dyl_A          180 --------------------------------------------------------------------------------  179 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                    ......||+.|+|||++.     ...+...+|+|++|+++|+|++|..  
T Consensus       180 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~--  227 (318)
T 2dyl_A          180 ------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF--  227 (318)
T ss_dssp             -------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSC--
T ss_pred             ------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCC--
Confidence                                          011225788899999884     4445578999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                             ||.......+.+..+..+..+.++....++..+.+||.+||+.||++|||++++++||||+...
T Consensus       228 -------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          228 -------PYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             -------TTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             -------CCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence                   8887667777888888887777766666889999999999999999999999999999998643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-36  Score=294.51  Aligned_cols=243  Identities=16%  Similarity=0.262  Sum_probs=199.1

Q ss_pred             CCcceEEEEEecCC-------CceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDD-------RRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-------~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+|+.||++.+       .....+||+|.+..... ...+++.+|+.+++++ +|+||+++++++..++..++||||
T Consensus        77 LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~  156 (382)
T 3tt0_A           77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  156 (382)
T ss_dssp             EEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             EecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEe
Confidence            58999999999863       24456788888765432 3347789999999999 999999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||
T Consensus       157 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG  236 (382)
T 3tt0_A          157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG  236 (382)
T ss_dssp             CTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCS
T ss_pred             cCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccC
Confidence            9999999999753                 38999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        ++........                                                                    
T Consensus       237 --~a~~~~~~~~--------------------------------------------------------------------  246 (382)
T 3tt0_A          237 --LARDIHHIDY--------------------------------------------------------------------  246 (382)
T ss_dssp             --CCCCSSCCCT--------------------------------------------------------------------
T ss_pred             --cccccccccc--------------------------------------------------------------------
Confidence              3331110000                                                                    


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                       ........||+.|+|||++.+..+...+|+|
T Consensus       247 -------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Diw  277 (382)
T 3tt0_A          247 -------------------------------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  277 (382)
T ss_dssp             -------------------------------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHH
T ss_pred             -------------------------------------------------cccccCCCCCcceeCHHHhcCCCCCchhHHH
Confidence                                                             0012223578899999999998888999999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+|+++|+|++ |..         ||.. .+..+....+..+.....  +..++..+.+||++||+.||++|||++++++
T Consensus       278 slG~il~ellt~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  345 (382)
T 3tt0_A          278 SFGVLLWEIFTLGGS---------PYPG-VPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  345 (382)
T ss_dssp             HHHHHHHHHHTTSCC---------SSTT-CCHHHHHHHHHTTCCCCC--CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999 765         7766 566666666666654443  3457889999999999999999999999987


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       346 ~  346 (382)
T 3tt0_A          346 D  346 (382)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2e-36  Score=294.71  Aligned_cols=247  Identities=18%  Similarity=0.187  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-----------CCCcccccceeEeCC----EE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-----------HPNIVNYLDSYLVGE----EL   65 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~~~~~~~~~~----~~   65 (400)
                      ||+|+++.||++.+......||+|.+... ....+.+.+|+.+++++.           |+||+++++++...+    ..
T Consensus        27 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  105 (373)
T 1q8y_A           27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV  105 (373)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred             eeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceE
Confidence            58999999999998888889999998643 234567889999999875           789999999988654    78


Q ss_pred             EEEEeccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecC------CCceEEeccch
Q psy9736          66 WVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGL------DGSVKLSKWNR  135 (400)
Q Consensus        66 ~lv~e~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~------~~~~~l~dfg~  135 (400)
                      ++++||+ +++|.+++..   ..+++..+..++.|++.||.|||++ +|+||||||+||+++.      .+.++|+||| 
T Consensus       106 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg-  183 (373)
T 1q8y_A          106 VMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG-  183 (373)
T ss_dssp             EEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCT-
T ss_pred             EEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccc-
Confidence            9999999 8899999875   3599999999999999999999998 9999999999999953      4479999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       .+.....                                                                        
T Consensus       184 -~a~~~~~------------------------------------------------------------------------  190 (373)
T 1q8y_A          184 -NACWYDE------------------------------------------------------------------------  190 (373)
T ss_dssp             -TCEETTB------------------------------------------------------------------------
T ss_pred             -cccccCC------------------------------------------------------------------------
Confidence             3331100                                                                        


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                        ......||+.|+|||++.+..++..+|+||
T Consensus       191 --------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~s  220 (373)
T 1q8y_A          191 --------------------------------------------------HYTNSIQTREYRSPEVLLGAPWGCGADIWS  220 (373)
T ss_dssp             --------------------------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHH
T ss_pred             --------------------------------------------------CCCCCCCCccccCcHHHhCCCCCchHhHHH
Confidence                                                              012236889999999999988888999999


Q ss_pred             ccchhhhhcCCCCcccccccccCcchhhc-----HHHHHHHHH---hCCCC-----------------------------
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFILS-----CRQALYLIA---TNKKP-----------------------------  338 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~~~-----~~~~~~~i~---~~~~~-----------------------------  338 (400)
                      +|+++|||++|..         ||.....     ....+..+.   ...+.                             
T Consensus       221 lG~il~el~~g~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (373)
T 1q8y_A          221 TACLIFELITGDF---------LFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP  291 (373)
T ss_dssp             HHHHHHHHHHSSC---------CC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC
T ss_pred             HHHHHHHHHhCCC---------CCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccc
Confidence            9999999999987         7764221     112222221   11110                             


Q ss_pred             -------CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         339 -------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       339 -------~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                             ....+...+..+.+||.+||+.||++|||++|+|+||||+....
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          292 LEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                   00112346778999999999999999999999999999998544

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.1e-36  Score=284.28  Aligned_cols=236  Identities=20%  Similarity=0.315  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCCcee-------EEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFF-------SKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~-------~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+....       ..|++|.+........+.+.+|+.++++++|+||+++++++..++..++||||++
T Consensus        16 lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   95 (289)
T 4fvq_A           16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVK   95 (289)
T ss_dssp             EEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCT
T ss_pred             eccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCC
Confidence            588999999999776654       5789998876666667889999999999999999999999999999999999999


Q ss_pred             CCChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc--------eEEeccchhhhhhhcc
Q psy9736          74 GGSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS--------VKLSKWNRFIATKLYI  143 (400)
Q Consensus        74 ~~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~--------~~l~dfg~~~~~~~~~  143 (400)
                      +++|.+++...  .+++..+..++.|++.||.|||+++++||||||+||+++.++.        ++|+|||  .+.....
T Consensus        96 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg--~~~~~~~  173 (289)
T 4fvq_A           96 FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG--ISITVLP  173 (289)
T ss_dssp             TCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC--SCTTTSC
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc--ccccccC
Confidence            99999999764  3999999999999999999999999999999999999998887        9999999  3321100


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (289)
T 4fvq_A          174 --------------------------------------------------------------------------------  173 (289)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~  302 (400)
                                                                 .....||+.|+|||++.+ ..+...+|.||+|+++||
T Consensus       174 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (289)
T 4fvq_A          174 -------------------------------------------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE  210 (289)
T ss_dssp             -------------------------------------------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred             -------------------------------------------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHH
Confidence                                                       011245677889998887 556688999999999999


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |++|..         |+....+............  .+  +...+..+.+||.+||+.||++|||++++++|
T Consensus       211 l~~g~~---------~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          211 ICSGGD---------KPLSALDSQRKLQFYEDRH--QL--PAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHTTTC---------CTTTTSCHHHHHHHHHTTC--CC--CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHcCCC---------CCccccchHHHHHHhhccC--CC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999754         5555344444333332221  11  12246679999999999999999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=9.4e-37  Score=292.17  Aligned_cols=248  Identities=22%  Similarity=0.367  Sum_probs=180.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHH-HHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEIL-VMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.+......||+|.+..... ...+++..|+. +++.++|+||+++++++..++..++||||+++ +|.
T Consensus        30 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~  108 (327)
T 3aln_A           30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFD  108 (327)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHH
T ss_pred             eccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChH
Confidence            5899999999999888888999998865432 23445666666 66678999999999999999999999999965 887


Q ss_pred             HHHh------hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          79 DVVT------ETCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        79 ~~i~------~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +++.      ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||  .+.......      
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg--~~~~~~~~~------  180 (327)
T 3aln_A          109 KFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG--ISGQLVDSI------  180 (327)
T ss_dssp             HHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCS--SSCC-----------
T ss_pred             HHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCC--Cceeccccc------
Confidence            7775      34689999999999999999999998 99999999999999999999999999  333111000      


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       181 --------------------------------------------------------------------------------  180 (327)
T 3aln_A          181 --------------------------------------------------------------------------------  180 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce----ecCCCCcccCCCCccchhhhhcCCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV----LDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                        ......||+.|+|||++    .+..+...+|.|++|+++|+|++|.
T Consensus       181 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~  226 (327)
T 3aln_A          181 ----------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR  226 (327)
T ss_dssp             -----------------------------------------------------------CCSHHHHHHHHHHHHHHHHSC
T ss_pred             ----------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCC
Confidence                                              01122578899999998    4555668899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      .         ||.......+.+..+..+..+.+..  ...++..+.+||.+||+.||++|||++++++||||...
T Consensus       227 ~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          227 F---------PYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             C---------CSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             C---------CCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            7         8876433344444444444443332  23478899999999999999999999999999999863

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.6e-36  Score=291.26  Aligned_cols=245  Identities=20%  Similarity=0.234  Sum_probs=189.9

Q ss_pred             CCcceEEEEEecCCCcee-EEEEeccccccCcchHHHHHHHHHHHHhCCCCC------cccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFF-SKILSNPITLAQQPKKELIINEILVMRENKHPN------IVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~-~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+++.||++.+.... ..||+|.+... ....+.+.+|+.+++.++|++      ++.+++++...+..++||||+ 
T Consensus        27 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  104 (355)
T 2eu9_A           27 LGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-  104 (355)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-
T ss_pred             eeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-
Confidence            589999999999776655 67888887543 234577889999999986655      888999999999999999999 


Q ss_pred             CCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe-------------------cCCCceEEe
Q psy9736          74 GGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL-------------------GLDGSVKLS  131 (400)
Q Consensus        74 ~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~-------------------~~~~~~~l~  131 (400)
                      ++++.+.+...   .+++..++.++.|++.||.|||+++|+||||||+||++                   +.++.++|+
T Consensus       105 ~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~  184 (355)
T 2eu9_A          105 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA  184 (355)
T ss_dssp             CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEEC
T ss_pred             CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEe
Confidence            55777766543   58999999999999999999999999999999999999                   567888999


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+...    .                                                                 
T Consensus       185 Dfg--~~~~~----~-----------------------------------------------------------------  193 (355)
T 2eu9_A          185 DFG--SATFD----H-----------------------------------------------------------------  193 (355)
T ss_dssp             CCT--TCEET----T-----------------------------------------------------------------
T ss_pred             ecC--ccccc----c-----------------------------------------------------------------
Confidence            999  33210    0                                                                 


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                           .......||+.|+|||++.+..+...+
T Consensus       194 -----------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~  220 (355)
T 2eu9_A          194 -----------------------------------------------------EHHTTIVATRHYRPPEVILELGWAQPC  220 (355)
T ss_dssp             -----------------------------------------------------SCCCSSCSCGGGCCHHHHTTCCCCTHH
T ss_pred             -----------------------------------------------------ccccCCcCCCcccCCeeeecCCCCCcc
Confidence                                                                 002234689999999999988888999


Q ss_pred             CCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHh--CCCCC-c----------------------------
Q psy9736         292 PPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIAT--NKKPE-I----------------------------  340 (400)
Q Consensus       292 d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~--~~~~~-~----------------------------  340 (400)
                      |.||+|+++|||++|..         ||.. .+..+.+..+.+  +..+. .                            
T Consensus       221 Di~slG~il~el~~g~~---------pf~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (355)
T 2eu9_A          221 DVWSIGCILFEYYRGFT---------LFQT-HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVK  290 (355)
T ss_dssp             HHHHHHHHHHHHHHSSC---------SCCC-SSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHH
T ss_pred             chHHHHHHHHHHHhCCC---------CCCC-CCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhcccc
Confidence            99999999999999976         8766 333222222211  11110 0                            


Q ss_pred             ----------chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         341 ----------KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       341 ----------~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                                ......+..+.+||++||+.||++|||++|+|+||||+...
T Consensus       291 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          291 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             ccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                      00111345789999999999999999999999999999754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=7.7e-36  Score=286.26  Aligned_cols=242  Identities=14%  Similarity=0.228  Sum_probs=190.1

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    +..++.+|++|.+.... ....+.+.+|+.++++++|+||+++++++..+. .+++++|+.++
T Consensus        23 lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g  101 (327)
T 3poz_A           23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFG  101 (327)
T ss_dssp             EEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTC
T ss_pred             EeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCC
Confidence            5889999999875    45566788999875433 234577999999999999999999999998654 77899999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++..........     
T Consensus       102 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg--~a~~~~~~~~~~-----  174 (327)
T 3poz_A          102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG--LAKLLGAEEKEY-----  174 (327)
T ss_dssp             BHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTT--HHHHHTTTCC-------
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCc--ceeEccCCcccc-----
Confidence            99999875  369999999999999999999999999999999999999999999999999  554221111100     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (327)
T 3poz_A          175 --------------------------------------------------------------------------------  174 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......||+.|+|||++.+..++..+|.||+|+++|||++ |..    
T Consensus       175 --------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~----  218 (327)
T 3poz_A          175 --------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----  218 (327)
T ss_dssp             -------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             --------------------------------cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCC----
Confidence                                            0112356789999999999888899999999999999999 876    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. .+.......+..+.....  +..++..+.+|+.+||+.||++|||+.+++++
T Consensus       219 -----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          219 -----PYDG-IPASEISSILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             -----TTTT-CCGGGHHHHHHTTCCCCC--CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             -----CccC-CCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                 7765 444444444555433322  34578899999999999999999999999865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.7e-36  Score=286.67  Aligned_cols=243  Identities=17%  Similarity=0.278  Sum_probs=196.1

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+     ......||+|.+..... ...+.+.+|+.++++++|+||+++++++..++..+++|||+++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  110 (314)
T 2ivs_A           31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKY  110 (314)
T ss_dssp             EEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             ecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCC
Confidence            58899999998865     34457889998865432 3457789999999999999999999999998999999999999


Q ss_pred             CChHHHHhhc-------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          75 GSLTDVVTET-------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        75 ~~L~~~i~~~-------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      ++|.+++...                         .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++
T Consensus       111 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~k  190 (314)
T 2ivs_A          111 GSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMK  190 (314)
T ss_dssp             CBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEE
T ss_pred             CCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEE
Confidence            9999998753                         278999999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  .+.........                                                              
T Consensus       191 l~Dfg--~~~~~~~~~~~--------------------------------------------------------------  206 (314)
T 2ivs_A          191 ISDFG--LSRDVYEEDSY--------------------------------------------------------------  206 (314)
T ss_dssp             ECCCT--TCEECTTTSCE--------------------------------------------------------------
T ss_pred             Ecccc--ccccccccccc--------------------------------------------------------------
Confidence            99999  33311110000                                                              


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                             .......+|+.|+|||++.+..+..
T Consensus       207 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~  231 (314)
T 2ivs_A          207 -------------------------------------------------------VKRSQGRIPVKWMAIESLFDHIYTT  231 (314)
T ss_dssp             -------------------------------------------------------ECSSCCCSCGGGCCHHHHHHCEECH
T ss_pred             -------------------------------------------------------eeccCCCCcccccChhhhcCCCcCc
Confidence                                                                   0012235678899999998887788


Q ss_pred             ccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         290 TTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      .+|.||+|+++|||++ |..         ||.. .+.......+..+..+..  +..+++.+.+||.+||+.||++|||+
T Consensus       232 ~~Di~slG~il~el~t~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~  299 (314)
T 2ivs_A          232 QSDVWSFGVLLWEIVTLGGN---------PYPG-IPPERLFNLLKTGHRMER--PDNCSEEMYRLMLQCWKQEPDKRPVF  299 (314)
T ss_dssp             HHHHHHHHHHHHHHHTTSCC---------SSTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhhHHHHHHHHHHHHhCCCC---------CCCC-CCHHHHHHHhhcCCcCCC--CccCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999999999999 875         7765 444445555555543333  34588899999999999999999999


Q ss_pred             HHHhcC
Q psy9736         369 SLLLKH  374 (400)
Q Consensus       369 ~~~l~h  374 (400)
                      ++++++
T Consensus       300 ~~l~~~  305 (314)
T 2ivs_A          300 ADISKD  305 (314)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=5.6e-36  Score=284.38  Aligned_cols=244  Identities=17%  Similarity=0.235  Sum_probs=196.6

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||.+.     +......|++|.+..... ...+.+.+|+.+++++ +|+||+++++++..++..+++|||++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~  110 (313)
T 1t46_A           31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC  110 (313)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             hCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCC
Confidence            5899999999986     556778899998875543 3457789999999999 99999999999999999999999999


Q ss_pred             CCChHHHHhhc-------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          74 GGSLTDVVTET-------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        74 ~~~L~~~i~~~-------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++|.+++...                   .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  190 (313)
T 1t46_A          111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG  190 (313)
T ss_dssp             TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCG
T ss_pred             CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccc
Confidence            99999998753                   38999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+..........                                                                  
T Consensus       191 --~~~~~~~~~~~~------------------------------------------------------------------  202 (313)
T 1t46_A          191 --LARDIKNDSNYV------------------------------------------------------------------  202 (313)
T ss_dssp             --GGSCTTSCTTSE------------------------------------------------------------------
T ss_pred             --ccccccccccce------------------------------------------------------------------
Confidence              443111110000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......||+.|+|||++.+..+...+|.|
T Consensus       203 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  231 (313)
T 1t46_A          203 ---------------------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVW  231 (313)
T ss_dssp             ---------------------------------------------------ECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ---------------------------------------------------eccCCCCcceeeChHHhcCCCCChHHHHH
Confidence                                                               01223567889999999988888999999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+|+++|+|++ |..         ||............+..+.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       232 slG~il~ellt~g~~---------p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          232 SYGIFLWELFSLGSS---------PYPGMPVDSKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             HHHHHHHHHHTTTCC---------SSTTCCSSHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCC---------CCCcccchhHHHHHhccCCCCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            99999999998 776         77663333333333333333222  3457889999999999999999999999987


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       301 ~  301 (313)
T 1t46_A          301 L  301 (313)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=4.6e-36  Score=293.33  Aligned_cols=243  Identities=14%  Similarity=0.209  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++...   .....||+|.+.... ....+.+.+|+.++++++|+||+++++++..++..++||||+++++
T Consensus        53 lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~s  132 (373)
T 2qol_A           53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS  132 (373)
T ss_dssp             EEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             EeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCc
Confidence            589999999998765   456778999886543 3345679999999999999999999999998889999999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++..........      
T Consensus       133 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg--~a~~~~~~~~~~------  204 (373)
T 2qol_A          133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG--LGRVLEDDPEAA------  204 (373)
T ss_dssp             HHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCc--cccccccCCccc------
Confidence            99999754  68999999999999999999999999999999999999999999999999  444221111000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       205 --------------------------------------------------------------------------------  204 (373)
T 2qol_A          205 --------------------------------------------------------------------------------  204 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                    .......+|+.|+|||++.+..+...+|+||+|+++||+++ |..     
T Consensus       205 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~-----  249 (373)
T 2qol_A          205 ------------------------------YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER-----  249 (373)
T ss_dssp             ---------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-C-----
T ss_pred             ------------------------------eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCC-----
Confidence                                          00111235778999999998888899999999999999997 876     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+..+....  .+..++..+.+||.+||+.||++|||++++++
T Consensus       250 ----P~~~-~~~~~~~~~i~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          250 ----PYWE-MSNQDVIKAVDEGYRLP--PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             ----TTTT-CCHHHHHHHHHTTEECC--CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCC--CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                8876 55666666665553222  23457889999999999999999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-36  Score=289.63  Aligned_cols=248  Identities=16%  Similarity=0.212  Sum_probs=195.4

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||.+.+     ......||+|.+.... ....+.+.+|+.+++++ +|+||+++++++..++..++||||++
T Consensus        53 lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~  132 (344)
T 1rjb_A           53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCC  132 (344)
T ss_dssp             EEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             ecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCC
Confidence            58999999999874     3456788999886442 22346789999999999 89999999999999899999999999


Q ss_pred             CCChHHHHhhc------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          74 GGSLTDVVTET------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        74 ~~~L~~~i~~~------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      +++|.+++...                        .+++..++.++.|++.||.|||+++++||||||+||+++.++.++
T Consensus       133 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~k  212 (344)
T 1rjb_A          133 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVK  212 (344)
T ss_dssp             TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEE
T ss_pred             CCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEE
Confidence            99999999753                        278999999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  .+..........                                                             
T Consensus       213 L~Dfg--~~~~~~~~~~~~-------------------------------------------------------------  229 (344)
T 1rjb_A          213 ICDFG--LARDIMSDSNYV-------------------------------------------------------------  229 (344)
T ss_dssp             ECCCG--GGSCGGGCTTSE-------------------------------------------------------------
T ss_pred             eCCCc--cCcccccCccce-------------------------------------------------------------
Confidence            99999  443221111000                                                             


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                              ......||+.|+|||++.+..+..
T Consensus       230 --------------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~  253 (344)
T 1rjb_A          230 --------------------------------------------------------VRGNARLPVKWMAPESLFEGIYTI  253 (344)
T ss_dssp             --------------------------------------------------------EETTEEECGGGCCHHHHHHCCCCH
T ss_pred             --------------------------------------------------------eccCccCccCccCHHHhccCCCCh
Confidence                                                                    012235678899999998888889


Q ss_pred             ccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         290 TTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      .+|+||+|+++|+|++ |..         ||............+..+..+..  +..+++.+.+||.+||+.||++|||+
T Consensus       254 ~~Di~slG~il~el~t~g~~---------p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~  322 (344)
T 1rjb_A          254 KSDVWSYGILLWEIFSLGVN---------PYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSF  322 (344)
T ss_dssp             HHHHHHHHHHHHHHTTTSCC---------SSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hHhHHHHHHHHHHHHcCCCC---------CcccCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            9999999999999998 876         88764333333333333333322  34578899999999999999999999


Q ss_pred             HHHhcCcccc
Q psy9736         369 SLLLKHPFLK  378 (400)
Q Consensus       369 ~~~l~hp~~~  378 (400)
                      .++++|..-.
T Consensus       323 ~~l~~~l~~~  332 (344)
T 1rjb_A          323 PNLTSFLGCQ  332 (344)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999875433

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=6e-36  Score=286.70  Aligned_cols=248  Identities=17%  Similarity=0.257  Sum_probs=197.2

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.     +......||+|.+.... .....++.+|+.++++++|+||+++++++..+...++||||+++
T Consensus        38 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  117 (327)
T 2yfx_A           38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG  117 (327)
T ss_dssp             CC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCC
Confidence            6899999999987     55667789999886432 33456789999999999999999999999988899999999999


Q ss_pred             CChHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC---CceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET--------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD---GSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~--------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~---~~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++...        .+++..++.++.|++.||.|||+.+++||||||+||+++.+   ..++|+|||  .+.....
T Consensus       118 ~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg--~~~~~~~  195 (327)
T 2yfx_A          118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG--MARDIYR  195 (327)
T ss_dssp             EEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH--HHHHHHC
T ss_pred             CcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc--ccccccc
Confidence            9999999753        38899999999999999999999999999999999999844   469999999  4432211


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       196 ~~~~~---------------------------------------------------------------------------  200 (327)
T 2yfx_A          196 ASYYR---------------------------------------------------------------------------  200 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccc---------------------------------------------------------------------------
Confidence            11000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......||+.|+|||++.+..+...+|.|++|+++|+|
T Consensus       201 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  238 (327)
T 2yfx_A          201 ------------------------------------------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI  238 (327)
T ss_dssp             -------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------------cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence                                                      01233578899999999888888999999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ++ |..         ||.. .+..+....+..+..+..  +..++..+.+||.+||+.||++|||++++++|.|.-.
T Consensus       239 lt~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          239 FSLGYM---------PYPS-KSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             HTTSCC---------SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCCC---------CCCC-cCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            98 765         7766 555666666666644433  3457889999999999999999999999999988653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4.7e-36  Score=283.04  Aligned_cols=244  Identities=16%  Similarity=0.215  Sum_probs=192.6

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.    +......||+|.+........+.+.+|+.++++++|+||+++++++...  ..+++||||+++
T Consensus        18 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   97 (295)
T 3ugc_A           18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY   97 (295)
T ss_dssp             EEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTT
T ss_pred             eeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCC
Confidence            5899999999887    7778889999998766665667899999999999999999999988643  468999999999


Q ss_pred             CChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++...  .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........    
T Consensus        98 ~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~~----  171 (295)
T 3ugc_A           98 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG--LTKVLPQDKEFF----  171 (295)
T ss_dssp             CBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCC--SCC-------------
T ss_pred             CCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCc--ccccccCCccee----
Confidence            9999999754  49999999999999999999999999999999999999999999999999  443221111000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (295)
T 3ugc_A          172 --------------------------------------------------------------------------------  171 (295)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|+||+|+++|||++|..    
T Consensus       172 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~----  215 (295)
T 3ugc_A          172 --------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE----  215 (295)
T ss_dssp             ------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTC----
T ss_pred             --------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccc----
Confidence                                            00122356778999999999888899999999999999999865    


Q ss_pred             cccccCcchh---------------hcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFI---------------LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~---------------~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           |+...               .........+..+....  .+..+++.+.+||.+||+.||++|||++++++
T Consensus       216 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          216 -----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             -----TTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----ccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCC--CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                 43321               11112233333333322  24458889999999999999999999999986

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.2e-36  Score=276.81  Aligned_cols=240  Identities=19%  Similarity=0.217  Sum_probs=197.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||.+.+. ...+|++|.+..... ..+.+.+|+.++++++|+||+++++++..++..+++|||+++++|.++
T Consensus        16 lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (267)
T 3t9t_A           16 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY   93 (267)
T ss_dssp             EEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHH
T ss_pred             ecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHH
Confidence            588999999998764 345788888865543 457789999999999999999999999988899999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........          
T Consensus        94 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg--~~~~~~~~~~~~----------  161 (267)
T 3t9t_A           94 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG--MTRFVLDDQYTS----------  161 (267)
T ss_dssp             HHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTT--GGGGBCCHHHHS----------
T ss_pred             HhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccc--cccccccccccc----------
Confidence            9753  58999999999999999999999999999999999999999999999999  443221110000          


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       162 --------------------------------------------------------------------------------  161 (267)
T 3t9t_A          162 --------------------------------------------------------------------------------  161 (267)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                  .....||+.|+|||++....+...+|.|++|+++|+|++ |..         
T Consensus       162 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~---------  204 (267)
T 3t9t_A          162 ----------------------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI---------  204 (267)
T ss_dssp             ----------------------------TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC---------
T ss_pred             ----------------------------cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCC---------
Confidence                                        112256778999999988888889999999999999999 776         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+..+....+..+.....  +...+..+.+||.+||+.||++|||+.+++++
T Consensus       205 p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          205 PYEN-RSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTTT-CCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHhcCCcCCC--CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7766 566666666766644333  33478899999999999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=5.5e-36  Score=286.22  Aligned_cols=249  Identities=22%  Similarity=0.271  Sum_probs=193.4

Q ss_pred             CCcceEEEEEecCCC-ceeEEEEeccccccCc--chHHHHHHHHHHHHhC---CCCCcccccceeE-----eCCEEEEEE
Q psy9736           1 MKRGVTIDRFSSDDR-RFFSKILSNPITLAQQ--PKKELIINEILVMREN---KHPNIVNYLDSYL-----VGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~-----~~~~~~lv~   69 (400)
                      ||+|+++.||++.+. ..+..||+|.+.....  .....+.+|+.+++.+   +|+||+++++++.     .....++++
T Consensus        19 lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   98 (326)
T 1blx_A           19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF   98 (326)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEE
T ss_pred             ecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEE
Confidence            588999999999764 4456778887653321  1123466788877766   8999999999987     456789999


Q ss_pred             eccCCCChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          70 EYLPGGSLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        70 e~~~~~~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ||+. ++|.+++...   .+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||  .+....... 
T Consensus        99 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg--~~~~~~~~~-  174 (326)
T 1blx_A           99 EHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQM-  174 (326)
T ss_dssp             ECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC--SCCCCCGGG-
T ss_pred             ecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCc--ccccccCCC-
Confidence            9996 5999988753   48999999999999999999999999999999999999999999999999  333111000 


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (326)
T 1blx_A          175 --------------------------------------------------------------------------------  174 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                             ......||+.|+|||++.+..+...+|.|++|+++|+|++|
T Consensus       175 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  215 (326)
T 1blx_A          175 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR  215 (326)
T ss_dssp             ---------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcC
Confidence                                                   01223688899999999988888899999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhC--CCC---------------------Cc-chhhhhcHHHHHHHHHhhhhhh
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATN--KKP---------------------EI-KEKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~--~~~---------------------~~-~~~~~~s~~~~dli~~~L~~dP  362 (400)
                      ..         ||.. .+....+..+...  .++                     .+ .....++..+.+||.+||+.||
T Consensus       216 ~~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  285 (326)
T 1blx_A          216 KP---------LFRG-SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  285 (326)
T ss_dssp             SC---------SCCC-SSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSST
T ss_pred             CC---------CCCC-CCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCc
Confidence            86         7766 4445555555431  000                     00 0113477889999999999999


Q ss_pred             hhhhcHHHHhcCccccccCC
Q psy9736         363 ETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ++|||++++++||||+....
T Consensus       286 ~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          286 AKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             TTSCCHHHHHTSGGGTTCCC
T ss_pred             ccCCCHHHHhcCccccccch
Confidence            99999999999999997543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.8e-36  Score=296.58  Aligned_cols=242  Identities=17%  Similarity=0.227  Sum_probs=197.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||.+........||+|.+..... ...+.+.+|+.++++++|+||+++++++..++..++||||+++++|.+
T Consensus       122 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~  201 (377)
T 3cbl_A          122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT  201 (377)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             eccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHH
Confidence            5899999999998887778899998764432 234568899999999999999999999998889999999999999999


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++...  .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++..........         
T Consensus       202 ~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG--~s~~~~~~~~~~---------  270 (377)
T 3cbl_A          202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG--MSREEADGVYAA---------  270 (377)
T ss_dssp             HHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGG--GCEECTTSEEEC---------
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCC--CceecCCCceee---------
Confidence            98753  58999999999999999999999999999999999999999999999999  433111100000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       271 --------------------------------------------------------------------------------  270 (377)
T 3cbl_A          271 --------------------------------------------------------------------------------  270 (377)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......+++.|+|||++....++..+|+||+|+++|||++ |..        
T Consensus       271 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~--------  314 (377)
T 3cbl_A          271 ----------------------------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS--------  314 (377)
T ss_dssp             ----------------------------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC--------
T ss_pred             ----------------------------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCC--------
Confidence                                        0111235678999999988777788999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       315 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          315 -PYPN-LSNQQTREFVEKGGRLPC--PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             -SSTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence             7766 555566666666544333  4457889999999999999999999999975

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=4e-36  Score=281.65  Aligned_cols=241  Identities=17%  Similarity=0.225  Sum_probs=187.1

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+.   .....|++|...... ....+.+.+|+.++++++|+||+++++++. ++..++||||+++++
T Consensus        23 lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~  101 (281)
T 1mp8_A           23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGE  101 (281)
T ss_dssp             EEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEE
T ss_pred             eeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCC
Confidence            578888888887653   344678888876543 234577899999999999999999999884 567899999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+.........       
T Consensus       102 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~-------  172 (281)
T 1mp8_A          102 LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDSTYY-------  172 (281)
T ss_dssp             HHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------------
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccc--cccccCccccc-------
Confidence            99999754  58999999999999999999999999999999999999999999999999  44322110000       


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (281)
T 1mp8_A          173 --------------------------------------------------------------------------------  172 (281)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                     ......+|+.|+|||++....+...+|.||+|+++|||++ |..     
T Consensus       173 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~-----  216 (281)
T 1mp8_A          173 -------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-----  216 (281)
T ss_dssp             -------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred             -------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC-----
Confidence                                           0112246778999999988888889999999999999996 765     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||.. .+..+....+..+....+  +..+++.+.+||.+||+.||++|||+.+++++
T Consensus       217 ----pf~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          217 ----PFQG-VKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             ----TTTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCc-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                7765 445555566666544433  34588899999999999999999999999863

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.5e-36  Score=281.81  Aligned_cols=240  Identities=17%  Similarity=0.243  Sum_probs=198.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||.+.+......|++|.+.... ...+.+.+|+.++++++|+||+++++++..++..++||||+++++|.++
T Consensus        21 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   99 (288)
T 3kfa_A           21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY   99 (288)
T ss_dssp             SGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHH
T ss_pred             cCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence            689999999999999888999999986543 3567899999999999999999999999999999999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........          
T Consensus       100 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg--~~~~~~~~~~~----------  167 (288)
T 3kfa_A          100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG--LSRLMTGDTYT----------  167 (288)
T ss_dssp             HHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCC--GGGTSCSSSSE----------
T ss_pred             HHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCc--cceeccCCccc----------
Confidence            975   358999999999999999999999999999999999999999999999999  44322111100          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (288)
T 3kfa_A          168 --------------------------------------------------------------------------------  167 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......+|+.|+|||++.+..+...+|.|++|+++|+|++ |..        
T Consensus       168 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~--------  211 (288)
T 3kfa_A          168 ----------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------  211 (288)
T ss_dssp             ----------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC--------
T ss_pred             ----------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCC--------
Confidence                                        0112246778999999998888889999999999999999 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+.......+........  +..+++.+.+||++||..||++|||++++++
T Consensus       212 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          212 -PYPG-IDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             -SSTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence             6655 444444444444433322  3457889999999999999999999999976

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-36  Score=280.54  Aligned_cols=244  Identities=18%  Similarity=0.221  Sum_probs=196.9

Q ss_pred             CCcceEEEEEecCC--CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDD--RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~--~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++..  ......|++|.+.... ....+.+.+|+.++++++|+||+++++++ ..+..++||||+++++|
T Consensus        18 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L   96 (287)
T 1u59_A           18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL   96 (287)
T ss_dssp             EECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEH
T ss_pred             ccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCH
Confidence            58999999999853  3445678888887543 23457789999999999999999999999 45678999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........       
T Consensus        97 ~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg--~~~~~~~~~~~~-------  167 (287)
T 1u59_A           97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG--LSKALGADDSYY-------  167 (287)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT--TCEECTTCSCEE-------
T ss_pred             HHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccc--ceeeeccCccee-------
Confidence            999864  369999999999999999999999999999999999999999999999999  333111110000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (287)
T 1u59_A          168 --------------------------------------------------------------------------------  167 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......||+.|+|||++.+..+...+|.||+|+++|+|++ |..      
T Consensus       168 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~------  212 (287)
T 1u59_A          168 -----------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK------  212 (287)
T ss_dssp             -----------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC------
T ss_pred             -----------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCC------
Confidence                                         00122356889999999988777789999999999999998 876      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP  375 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp  375 (400)
                         ||.. .+..+....+..+..+..  +..+++.+.+||.+||+.||++|||+.++++|.
T Consensus       213 ---p~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          213 ---PYKK-MKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             ---TTTT-CCTHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             ---Cccc-CCHHHHHHHHhcCCcCCC--CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence               8766 555566666666654444  345888999999999999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.7e-36  Score=300.49  Aligned_cols=245  Identities=18%  Similarity=0.245  Sum_probs=177.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.|+. .+......||+|.+.....   ..+.+|+.+++.+ +|+||+++++++..+...|+||||+. ++|.+
T Consensus        32 LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~  106 (432)
T 3p23_A           32 LGHGAEGTIVY-RGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQE  106 (432)
T ss_dssp             EEECGGGCEEE-EEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred             eecCcCEEEEE-EEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHH
Confidence            57787776543 2333456678887754332   2246899999999 89999999999999999999999995 59999


Q ss_pred             HHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---C--CceEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---D--GSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~--~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++...  .+.+..+..++.|++.||.|||+.+|+||||||+||+++.   +  ..++|+|||  ++.........     
T Consensus       107 ~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG--~a~~~~~~~~~-----  179 (432)
T 3p23_A          107 YVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG--LCKKLAVGRHS-----  179 (432)
T ss_dssp             HHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTT--EEECC-----------
T ss_pred             HHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccc--ceeeccCCCcc-----
Confidence            98754  3555567899999999999999999999999999999953   2  357799999  44322111000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (432)
T 3p23_A          180 --------------------------------------------------------------------------------  179 (432)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcC-CCC
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLG-PHK  308 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~-gd~  308 (400)
                                                     ........||+.|+|||++.+   ..++..+|+||+||++|||++ |..
T Consensus       180 -------------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~  228 (432)
T 3p23_A          180 -------------------------------FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH  228 (432)
T ss_dssp             -------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCB
T ss_pred             -------------------------------eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCC
Confidence                                           001233479999999999984   444457899999999999999 665


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                               ||... .... ...+... ...........+..+.+||.+||+.||++|||++++++||||+.
T Consensus       229 ---------pf~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          229 ---------PFGKS-LQRQ-ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             ---------TTBST-TTHH-HHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             ---------Ccchh-hHHH-HHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence                     76542 2222 2222222 22223333445677899999999999999999999999999975

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=7.5e-36  Score=277.87  Aligned_cols=238  Identities=19%  Similarity=0.276  Sum_probs=188.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc----chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ----PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+.  ...|++|.+.....    ...+.+.+|+.+++.++|+||+++++++..++..+++|||+++++
T Consensus        15 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (271)
T 3dtc_A           15 IGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP   92 (271)
T ss_dssp             EEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEE
T ss_pred             eccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCC
Confidence            588999999998754  45677777654322    234678999999999999999999999999999999999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCCCceEecC--------CCceEEeccchhhhhhhcccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSNQ---VIHRDIKSDNILLGL--------DGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~nil~~~--------~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      |.+++..+.+++..+..++.|++.||.|||+++   ++|+||||+||+++.        ++.++|+|||  .+.......
T Consensus        93 L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg--~~~~~~~~~  170 (271)
T 3dtc_A           93 LNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG--LAREWHRTT  170 (271)
T ss_dssp             HHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC--C--------
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC--ccccccccc
Confidence            999998888999999999999999999999998   899999999999986        6789999999  333111000


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (271)
T 3dtc_A          171 --------------------------------------------------------------------------------  170 (271)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                                                               .....||+.|+|||++.+..+...+|.||+|+++|+|++
T Consensus       171 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  209 (271)
T 3dtc_A          171 -----------------------------------------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT  209 (271)
T ss_dssp             ----------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence                                                     112358889999999998888889999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      |..         ||.. .+.......+...... .+.+..+++.+.+||.+||+.||++|||+.++++|
T Consensus       210 g~~---------p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          210 GEV---------PFRG-IDGLAVAYGVAMNKLA-LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCC---------TTTT-SCHHHHHHHHHTSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC---------CCCC-CCHHHHHHhhhcCCCC-CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            987         8877 5555555555544322 22244578899999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-35  Score=278.43  Aligned_cols=245  Identities=15%  Similarity=0.196  Sum_probs=198.6

Q ss_pred             CCcceEEEEEecC---CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEE-EEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEEL-WVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.   +......+++|.+..... ...+.+.+|+.+++.++|+||+++++++...+.. ++++||+.++
T Consensus        29 lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~  108 (298)
T 3pls_A           29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHG  108 (298)
T ss_dssp             EEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTC
T ss_pred             eccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCC
Confidence            5889999999886   555566788888764433 3457789999999999999999999999866544 8999999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........     
T Consensus       109 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg--~~~~~~~~~~~~-----  181 (298)
T 3pls_A          109 DLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFG--LARDILDREYYS-----  181 (298)
T ss_dssp             BHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTT--SSCTTTTGGGGC-----
T ss_pred             CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCC--CcccccCCcccc-----
Confidence            99999975  468999999999999999999999999999999999999999999999999  443221110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (298)
T 3pls_A          182 --------------------------------------------------------------------------------  181 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ........+|+.|+|||.+.+..+...+|.||+|+++|+|++|..     
T Consensus       182 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-----  226 (298)
T 3pls_A          182 ------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGA-----  226 (298)
T ss_dssp             ------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSC-----
T ss_pred             ------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCC-----
Confidence                                          011233467889999999999888889999999999999999765     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          |+....+.......+..+.....  +..++..+.+||.+||+.||++|||+.++++
T Consensus       227 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          227 ----PPYRHIDPFDLTHFLAQGRRLPQ--PEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ----CTTTTSCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCccCCHHHHHHHhhcCCCCCC--CccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                66665666666666666654333  4457889999999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.8e-35  Score=281.33  Aligned_cols=243  Identities=18%  Similarity=0.178  Sum_probs=189.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|.++.||.+.+......|++|.+.....   ...+.+.+|+.++++++|+||+++++++..++..++++||+++++|
T Consensus        42 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  121 (309)
T 2h34_A           42 VGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDL  121 (309)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEH
T ss_pred             EcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCH
Confidence            5889999999998887788899998764432   2247788999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........          
T Consensus       122 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg--~~~~~~~~~~----------  189 (309)
T 2h34_A          122 AAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFG--IASATTDEKL----------  189 (309)
T ss_dssp             HHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCC--C-------------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCc--cCcccccccc----------
Confidence            999875 469999999999999999999999999999999999999999999999999  3331111000          


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (309)
T 2h34_A          190 --------------------------------------------------------------------------------  189 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  .......||+.|+|||++.+..+...+|.|++|+++|+|++|..        
T Consensus       190 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~--------  233 (309)
T 2h34_A          190 ----------------------------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP--------  233 (309)
T ss_dssp             -----------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCC--------
Confidence                                        00123368899999999998888889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-cHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-SASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-s~~~~l~  373 (400)
                       ||.. .+.......+....+.....+.+++..+.+||.+||+.||++|| |++++++
T Consensus       234 -pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          234 -PYQG-DQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             -SSCS-CHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             -CCCC-chHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence             8876 33333333333332222223455788999999999999999999 7777764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.2e-35  Score=284.53  Aligned_cols=245  Identities=17%  Similarity=0.216  Sum_probs=196.3

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeE--eCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~--~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.    +......|++|.+........+.+.+|+.++++++|+||+++++++.  .....++||||+++
T Consensus        31 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~  110 (327)
T 3lxl_A           31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS  110 (327)
T ss_dssp             EEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTT
T ss_pred             ccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCC
Confidence            5899999999987    77888999999987766656678999999999999999999999886  45679999999999


Q ss_pred             CChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++..  ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........    
T Consensus       111 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~~~~~~~~~~~~----  184 (327)
T 3lxl_A          111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG--LAKLLPLDKDYY----  184 (327)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGG--GCEECCTTCSEE----
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccc--cceecccCCccc----
Confidence            999999975  369999999999999999999999999999999999999999999999999  443111110000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (327)
T 3lxl_A          185 --------------------------------------------------------------------------------  184 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+..+...+|+|++|+++|+|++|..    
T Consensus       185 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~----  228 (327)
T 3lxl_A          185 --------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD----  228 (327)
T ss_dssp             --------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC----
T ss_pred             --------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC----
Confidence                                            00223367888999999988877789999999999999999976    


Q ss_pred             cccccCcchhhcH--------------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSC--------------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~--------------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||......              ......+..+.....  +..+++.+.+||++||+.||++|||+++++++
T Consensus       229 -----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          229 -----KSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA--PPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             -----GGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCccccchhhhhcccccccccHHHHHHHhhcccCCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 66542211              122223333332222  44578899999999999999999999999654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.3e-36  Score=290.08  Aligned_cols=243  Identities=21%  Similarity=0.246  Sum_probs=170.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHH-HHHhCCCCCcccccceeEe----CCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEIL-VMRENKHPNIVNYLDSYLV----GEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~   75 (400)
                      ||+|+++.||++.+......||+|.+....     ...+|+. .++.+.|+||+++++++..    +...++||||++++
T Consensus        37 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg  111 (336)
T 3fhr_A           37 LGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG  111 (336)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC
Confidence            589999999999988888899999875321     1233433 4566799999999999876    44689999999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhh
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      +|.+++...   .+++..++.++.|++.||.|||+.+++||||||+||+++.   ++.++|+|||  .+....    .. 
T Consensus       112 ~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg--~~~~~~----~~-  184 (336)
T 3fhr_A          112 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG--FAKETT----QN-  184 (336)
T ss_dssp             EHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT--TCEEC--------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc--cceecc----cc-
Confidence            999999754   5999999999999999999999999999999999999976   4559999999  333110    00 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       185 --------------------------------------------------------------------------------  184 (336)
T 3fhr_A          185 --------------------------------------------------------------------------------  184 (336)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                          ......||+.|+|||++....+...+|.|++|+++|+|++|.. 
T Consensus       185 ------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~-  227 (336)
T 3fhr_A          185 ------------------------------------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP-  227 (336)
T ss_dssp             -------------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSC-
T ss_pred             ------------------------------------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCC-
Confidence                                                0122367889999999988777788999999999999999987 


Q ss_pred             ccccccccCcchhhcHH---HHHHHHHhCC-CCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCR---QALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~---~~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||.......   .....+.... ....+.+..++..+.+||++||+.||++|||++++|+||||+..
T Consensus       228 --------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          228 --------PFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             --------CC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             --------CCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence                    886632211   1111111111 11112234578899999999999999999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=8.5e-36  Score=283.78  Aligned_cols=250  Identities=20%  Similarity=0.314  Sum_probs=191.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCC--CCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENK--HPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+.. ...||+|.+....  ....+.+.+|+.++++++  |+||+++++++..+...+++||+. +++
T Consensus        36 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~  113 (313)
T 3cek_A           36 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NID  113 (313)
T ss_dssp             EECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCC-SEE
T ss_pred             ecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecC-CCc
Confidence            5899999999997754 6678888876543  234577899999999996  599999999999999999999954 789


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. ..+++..+..++.|++.||.|||+.+++|+||||+||+++ ++.++|+|||  .+..........       
T Consensus       114 L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg--~~~~~~~~~~~~-------  183 (313)
T 3cek_A          114 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFG--IANQMQPDTTSV-------  183 (313)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCS--SSCC---------------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeecc--ccccccCccccc-------
Confidence            9999875 4789999999999999999999999999999999999996 4899999999  433221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (313)
T 3cek_A          184 --------------------------------------------------------------------------------  183 (313)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-----------CCCCcccCCCCccchhhhhc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-----------KNKNQTTPPTGLTGSILEFL  304 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~d~~s~g~~~~~~~  304 (400)
                                                    ......||+.|+|||++.+           ..+...+|+||+|+++|+|+
T Consensus       184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~  233 (313)
T 3cek_A          184 ------------------------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  233 (313)
T ss_dssp             ------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred             ------------------------------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence                                          0122357777888887764           34557899999999999999


Q ss_pred             CCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       305 ~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      +|..         ||............+..... ....+...+..+.+||.+||+.||++|||++++++||||+....
T Consensus       234 ~g~~---------pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          234 YGKT---------PFQQIINQISKLHAIIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             HSSC---------TTTTCCSHHHHHHHHHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred             hCCC---------chhhHHHHHHHHHHHHhccc-ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence            9987         88775555555555544322 11223335778999999999999999999999999999997544

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.1e-35  Score=279.35  Aligned_cols=236  Identities=17%  Similarity=0.253  Sum_probs=187.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-------HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-------KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-------~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+++.||++.+......||+|.+.......       .+.+.+|+.++++++|+||+++++++.+..  +++|||++
T Consensus        27 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~  104 (287)
T 4f0f_A           27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVP  104 (287)
T ss_dssp             CCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCT
T ss_pred             cccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecC
Confidence            689999999999888888889999876543211       167899999999999999999999987655  68999999


Q ss_pred             CCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecCCCc-----eEEeccchhhhhhhccc
Q psy9736          74 GGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGS-----VKLSKWNRFIATKLYIE  144 (400)
Q Consensus        74 ~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~~~~-----~~l~dfg~~~~~~~~~~  144 (400)
                      +++|.+.+..  ..+++..+..++.|++.||.|||+++  ++|+||||+||+++.++.     ++|+|||  .+..... 
T Consensus       105 ~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg--~~~~~~~-  181 (287)
T 4f0f_A          105 CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--LSQQSVH-  181 (287)
T ss_dssp             TCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT--TCBCCSS-
T ss_pred             CCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC--ccccccc-
Confidence            9999888854  36999999999999999999999999  999999999999988776     9999999  3321000 


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                                                                                                      
T Consensus       182 --------------------------------------------------------------------------------  181 (287)
T 4f0f_A          182 --------------------------------------------------------------------------------  181 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee--cCCCCcccCCCCccchhhh
Q psy9736         225 WYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL--DKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~d~~s~g~~~~~  302 (400)
                                                               ......||+.|+|||++.  ...+...+|.||+|+++|+
T Consensus       182 -----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~  220 (287)
T 4f0f_A          182 -----------------------------------------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT  220 (287)
T ss_dssp             -----------------------------------------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred             -----------------------------------------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence                                                     012236889999999984  3444578999999999999


Q ss_pred             hcCCCCcccccccccCcchhhc-HHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILS-CRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~-~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |++|..         ||..... .......+... ..+.+  +..+++.+.+||.+||+.||++|||++++++
T Consensus       221 l~~g~~---------pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          221 ILTGEG---------PFDEYSYGKIKFINMIREEGLRPTI--PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHSSC---------TTTTCCCCHHHHHHHHHHSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCC---------CCccccccHHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999987         8866332 23223333333 22333  4458889999999999999999999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.2e-35  Score=295.90  Aligned_cols=238  Identities=14%  Similarity=0.222  Sum_probs=197.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.... ..+||+|.+.... ...+.+.+|+.++++++|+||+++++++. +...++||||+++++|.++
T Consensus       196 lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~  272 (454)
T 1qcf_A          196 LGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF  272 (454)
T ss_dssp             EECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHH
T ss_pred             cccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHH
Confidence            6899999999997653 4568999887544 35678999999999999999999999886 5678999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++..........         
T Consensus       273 l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG--~a~~~~~~~~~~---------  341 (454)
T 1qcf_A          273 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG--LARVIEDNEYTA---------  341 (454)
T ss_dssp             HHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTT--GGGGBCCHHHHT---------
T ss_pred             HHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCC--CceEcCCCceec---------
Confidence            9743   68999999999999999999999999999999999999999999999999  444221111000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       342 --------------------------------------------------------------------------------  341 (454)
T 1qcf_A          342 --------------------------------------------------------------------------------  341 (454)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   .....+|+.|+|||++....+...+|+||+|+++|||++ |..        
T Consensus       342 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~--------  384 (454)
T 1qcf_A          342 -----------------------------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI--------  384 (454)
T ss_dssp             -----------------------------TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC--------
T ss_pred             -----------------------------cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCC--------
Confidence                                         112246778999999998888899999999999999999 876        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+..+.....  +..+++.+.+||.+||+.||++|||++++++
T Consensus       385 -P~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          385 -PYPG-MSNPEVIRALERGYRMPR--PENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             -SSTT-CCHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence             8876 666667777776644333  4568889999999999999999999999864

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.3e-35  Score=283.35  Aligned_cols=243  Identities=16%  Similarity=0.223  Sum_probs=197.8

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.+.     .....|++|.+..... .....+.+|+.+++.++|+||+++++++..++..++||||+++
T Consensus        33 lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  112 (322)
T 1p4o_A           33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR  112 (322)
T ss_dssp             EEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCC
Confidence            588999999988655     4567899998865433 2345688999999999999999999999988899999999999


Q ss_pred             CChHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTE-----------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~-----------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      ++|.+++..           ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.....
T Consensus       113 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg--~~~~~~~  190 (322)
T 1p4o_A          113 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYE  190 (322)
T ss_dssp             CBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT--CCCGGGG
T ss_pred             CcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCc--ccccccc
Confidence            999998864           246899999999999999999999999999999999999999999999999  4331111


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       191 ~~~~~---------------------------------------------------------------------------  195 (322)
T 1p4o_A          191 TDYYR---------------------------------------------------------------------------  195 (322)
T ss_dssp             GGCEE---------------------------------------------------------------------------
T ss_pred             ccccc---------------------------------------------------------------------------
Confidence            10000                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......||+.|+|||++.+..+...+|.||+|+++|+|
T Consensus       196 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  233 (322)
T 1p4o_A          196 ------------------------------------------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  233 (322)
T ss_dssp             ------------------------------------------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------------cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHH
Confidence                                                      01122567889999999988888899999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++ |..         ||.. .+.......+..+.....  +..++..+.+||.+||+.||++|||+.++++|
T Consensus       234 ~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          234 ATLAEQ---------PYQG-LSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHTSCC---------TTTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCC---------cccc-CCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            98 665         7765 566666666666544333  34578899999999999999999999999886

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=7.3e-36  Score=302.49  Aligned_cols=240  Identities=16%  Similarity=0.241  Sum_probs=198.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++........||+|.+..... ..+.|.+|+.++++++|+||+++++++..+...++||||+++++|.++
T Consensus       228 lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~  306 (495)
T 1opk_A          228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY  306 (495)
T ss_dssp             SGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             ecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHH
Confidence            6899999999999888888999999875543 567899999999999999999999999988899999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.........          
T Consensus       307 l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~~~~----------  374 (495)
T 1opk_A          307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG--LSRLMTGDTYT----------  374 (495)
T ss_dssp             HHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTT--CEECCTTCCEE----------
T ss_pred             HHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecc--cceeccCCcee----------
Confidence            975   358999999999999999999999999999999999999999999999999  44311110000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       375 --------------------------------------------------------------------------------  374 (495)
T 1opk_A          375 --------------------------------------------------------------------------------  374 (495)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......+|+.|+|||++....+...+|+||+|+++|||++ |..        
T Consensus       375 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~--------  418 (495)
T 1opk_A          375 ----------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------  418 (495)
T ss_dssp             ----------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC--------
T ss_pred             ----------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCC--------
Confidence                                        0112246778999999998878889999999999999998 765        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+.++.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       419 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          419 -PYPG-IDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             -SSTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence             7765 444444555555433332  4457889999999999999999999999975

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.2e-35  Score=278.62  Aligned_cols=245  Identities=14%  Similarity=0.180  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeE-eCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYL-VGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++..   ......+++|.+.... ....+.+.+|+.++++++|+||+++++++. .++..+++|||++++
T Consensus        33 lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~  112 (298)
T 3f66_A           33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG  112 (298)
T ss_dssp             EEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTC
T ss_pred             eeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCC
Confidence            58899999998863   3344567888876433 234577899999999999999999999854 456889999999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+..........     
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg--~a~~~~~~~~~~-----  185 (298)
T 3f66_A          113 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFG--LARDMYDKEYYS-----  185 (298)
T ss_dssp             BHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCG--GGCCCSCGGGCB-----
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccc--ccccccccchhc-----
Confidence            99999975  358999999999999999999999999999999999999999999999999  443221111000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (298)
T 3f66_A          186 --------------------------------------------------------------------------------  185 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ........||+.|+|||++.+..+...+|.||+|+++|+|++|..     
T Consensus       186 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~-----  230 (298)
T 3f66_A          186 ------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-----  230 (298)
T ss_dssp             ------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC-----
T ss_pred             ------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCC-----
Confidence                                          001223367889999999998888889999999999999999654     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          |+....+..+....+..+.....  +..++..+.++|.+||+.||++|||+.++++
T Consensus       231 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          231 ----PPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             ----CSSTTSCTTTHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCccCCHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                55554666666666666654433  3447889999999999999999999999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.9e-35  Score=278.65  Aligned_cols=242  Identities=19%  Similarity=0.311  Sum_probs=189.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+++.||++.+...+..||+|.+...   .....+.+.+|+.++++++|+||+++++++..++..+++|||+++++|
T Consensus        40 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  119 (310)
T 2wqm_A           40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL  119 (310)
T ss_dssp             EECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBH
T ss_pred             ecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCH
Confidence            58999999999987777788899987643   233457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          78 TDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        78 ~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+++..     ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+........      
T Consensus       120 ~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg--~~~~~~~~~~------  191 (310)
T 2wqm_A          120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG--LGRFFSSKTT------  191 (310)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------------------
T ss_pred             HHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecc--ceeeecCCCc------
Confidence            998863     358999999999999999999999999999999999999999999999999  3331110000      


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       192 --------------------------------------------------------------------------------  191 (310)
T 2wqm_A          192 --------------------------------------------------------------------------------  191 (310)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ......||+.|+|||++.+..+...+|.|++|+++|+|++|..    
T Consensus       192 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~----  234 (310)
T 2wqm_A          192 ---------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS----  234 (310)
T ss_dssp             ----------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             ---------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCC----
Confidence                                             0112367889999999998888889999999999999999987    


Q ss_pred             cccccCcchhh-cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFIL-SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.... +.......+.....+... ...++..+.+||.+||+.||++|||++++++
T Consensus       235 -----p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          235 -----PFYGDKMNLYSLCKKIEQCDYPPLP-SDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             -----TTC---CCHHHHHHHHHTTCSCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCcccchhHHHHHHHhhcccCCCCc-ccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                 886643 333444444444333332 2457889999999999999999999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.1e-35  Score=278.13  Aligned_cols=242  Identities=15%  Similarity=0.213  Sum_probs=194.9

Q ss_pred             CCcceEEEEEec--CCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSS--DDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~--~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++  ........|++|.+.....  ...+.+.+|+.+++.++|+||+++++++ ..+..++|+||+++++
T Consensus        25 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~  103 (291)
T 1xbb_A           25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGP  103 (291)
T ss_dssp             EEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred             cccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCC
Confidence            589999999999  5667778899998865432  2357789999999999999999999998 5667899999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........       
T Consensus       104 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~~-------  174 (291)
T 1xbb_A          104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG--LSKALRADENYY-------  174 (291)
T ss_dssp             HHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT--TCEECCTTCSEE-------
T ss_pred             HHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCC--cceeeccCCCcc-------
Confidence            99999865 69999999999999999999999999999999999999999999999999  333111110000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (291)
T 1xbb_A          175 --------------------------------------------------------------------------------  174 (291)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......+|+.|+|||++.+..+...+|.||+|+++|+|++ |..      
T Consensus       175 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~------  219 (291)
T 1xbb_A          175 -----------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK------  219 (291)
T ss_dssp             -----------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCC------
T ss_pred             -----------------------------cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCC------
Confidence                                         00112246788999999988777788999999999999999 876      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||.. .+..+....+..+..+..  +..++..+.++|.+||+.||++|||+.++++
T Consensus       220 ---p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          220 ---PYRG-MKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             ---SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence               8776 556666666666654444  3457889999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.3e-35  Score=276.29  Aligned_cols=241  Identities=16%  Similarity=0.266  Sum_probs=191.3

Q ss_pred             CCcceEEEEEecC---CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.   +......|++|.+.... ....+.+.+|+.+++.++|+||+++++++.. +..++++||+++++
T Consensus        20 lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~   98 (281)
T 3cc6_A           20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGE   98 (281)
T ss_dssp             EEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCB
T ss_pred             EEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCC
Confidence            5788888888875   44455678999876543 2345778999999999999999999999874 45789999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+.........       
T Consensus        99 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~-------  169 (281)
T 3cc6_A           99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG--LSRYIEDEDYY-------  169 (281)
T ss_dssp             HHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCC--GGGCC-------------
T ss_pred             HHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccC--CCccccccccc-------
Confidence            99999753  58999999999999999999999999999999999999999999999999  43311110000       


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (281)
T 3cc6_A          170 --------------------------------------------------------------------------------  169 (281)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                     ......+|+.|+|||++....+...+|.||+|+++|+|++ |..     
T Consensus       170 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~-----  213 (281)
T 3cc6_A          170 -------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ-----  213 (281)
T ss_dssp             ----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC-----
T ss_pred             -------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCC-----
Confidence                                           0112356788999999988888889999999999999998 876     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||.. .........+..+.....  +..+++.+.+||.+||+.||++|||+.+++++
T Consensus       214 ----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          214 ----PFFW-LENKDVIGVLEKGDRLPK--PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             ----TTTT-SCGGGHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----Cccc-CChHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                8765 333344445555543332  34478899999999999999999999999874

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.2e-35  Score=281.32  Aligned_cols=241  Identities=15%  Similarity=0.232  Sum_probs=192.1

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    +..++.+|++|.+.... ....+.+.+|+.++++++|+||+++++++..+. .+++++|+.++
T Consensus        23 lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g  101 (327)
T 3lzb_A           23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFG  101 (327)
T ss_dssp             EEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSC
T ss_pred             eeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCC
Confidence            5889999998874    56677888999875442 335678999999999999999999999998655 78899999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+..........     
T Consensus       102 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG--~a~~~~~~~~~~-----  174 (327)
T 3lzb_A          102 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG--LAKLLGAEEKEY-----  174 (327)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTT--C----------------
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCc--ceeEccCccccc-----
Confidence            99999875  369999999999999999999999999999999999999999999999999  443221111000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (327)
T 3lzb_A          175 --------------------------------------------------------------------------------  174 (327)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......||+.|+|||++.+..+...+|+||+|+++|||++ |..    
T Consensus       175 --------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~----  218 (327)
T 3lzb_A          175 --------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----  218 (327)
T ss_dssp             -------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             --------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCC----
Confidence                                            0112256788999999999888899999999999999999 876    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.. .+.......+..+.....  +..++..+.+||++||+.||++|||+.++++
T Consensus       219 -----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          219 -----PYDG-IPASEISSILEKGERLPQ--PPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             -----TTTT-CCGGGHHHHHHTTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCCC-CCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                 7765 444455555555543333  3457889999999999999999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.2e-35  Score=279.01  Aligned_cols=253  Identities=15%  Similarity=0.201  Sum_probs=193.5

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      ||+|+++.||++.    +......||+|.+.... ....+.+.+|+.+++.++|+||+++++++...  ..++++|||++
T Consensus        29 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~  108 (302)
T 4e5w_A           29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP  108 (302)
T ss_dssp             EEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCT
T ss_pred             cCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCC
Confidence            5899999999887    77788899999987443 23457789999999999999999999999876  56899999999


Q ss_pred             CCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          74 GGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        74 ~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      +++|.+++..  ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+..........   
T Consensus       109 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~~---  183 (302)
T 4e5w_A          109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG--LTKAIETDKEYY---  183 (302)
T ss_dssp             TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT--TCEECCTTCCEE---
T ss_pred             CCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc--ccccccCCCcce---
Confidence            9999999954  369999999999999999999999999999999999999999999999999  433111110000   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (302)
T 4e5w_A          184 --------------------------------------------------------------------------------  183 (302)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCC-cc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK-WS  310 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~-ws  310 (400)
                                                       .......||+.|+|||++.+..+...+|.||+|+++|+|++|.. |.
T Consensus       184 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          184 ---------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             ---------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             ---------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence                                             00223367888999999988877788999999999999999864 10


Q ss_pred             cccc----cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         311 FQPH----FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       311 ~g~~----~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ....    ...|+............+..+.....  +..+++.+.+||++||+.||++|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          231 SPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC--PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             SHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             chhhHHhhccCCcccccCHHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            0000    01233332333444444444443333  3458889999999999999999999999986

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.9e-35  Score=284.15  Aligned_cols=243  Identities=15%  Similarity=0.239  Sum_probs=195.6

Q ss_pred             CCcceEEEEEecCCC-------ceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDR-------RFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-------~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+|+.||++.+.       ..+..||+|.+..... ...+.+.+|+.+++++ +|+||+++++++..++..++||||
T Consensus        43 lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  122 (334)
T 2pvf_A           43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  122 (334)
T ss_dssp             EEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEEC
T ss_pred             EeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEEC
Confidence            588999999988643       4567789998865432 3456789999999999 899999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++++|.+++...                 .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||
T Consensus       123 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg  202 (334)
T 2pvf_A          123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFG  202 (334)
T ss_dssp             CTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccc
Confidence            9999999998753                 28899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+.........                                                                   
T Consensus       203 --~~~~~~~~~~~-------------------------------------------------------------------  213 (334)
T 2pvf_A          203 --LARDINNIDYY-------------------------------------------------------------------  213 (334)
T ss_dssp             --TCEECTTTSSE-------------------------------------------------------------------
T ss_pred             --ccccccccccc-------------------------------------------------------------------
Confidence              33311100000                                                                   


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                        .......+|+.|+|||++.+..+...+|.|
T Consensus       214 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  243 (334)
T 2pvf_A          214 --------------------------------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVW  243 (334)
T ss_dssp             --------------------------------------------------ECCSCCCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             --------------------------------------------------cccCCCCcccceeChHHhcCCCcChHHHHH
Confidence                                                              001223567889999999887777889999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|+++|+|++ |..         ||.. .+..+....+..+.....  +..++..+.+||++||..||++|||++++++
T Consensus       244 slG~il~ellt~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  311 (334)
T 2pvf_A          244 SFGVLMWEIFTLGGS---------PYPG-IPVEELFKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVE  311 (334)
T ss_dssp             HHHHHHHHHHTTSCC---------SSTT-CCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCC---------CcCc-CCHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999 776         7766 555566666666654433  3457889999999999999999999999987


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       312 ~  312 (334)
T 2pvf_A          312 D  312 (334)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.7e-35  Score=305.46  Aligned_cols=242  Identities=15%  Similarity=0.212  Sum_probs=198.1

Q ss_pred             CCcceEEEEEec--CCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSS--DDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~--~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++  ........||+|.+.....  ...+.+.+|+.++++++|+||+++++++. ++..++||||+++++
T Consensus       377 LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~  455 (635)
T 4fl3_A          377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGP  455 (635)
T ss_dssp             EEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEE
T ss_pred             eccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCC
Confidence            589999999998  5566778899998765432  33578999999999999999999999986 456889999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.||+.||.|||+++|+||||||+||+++.++.++|+|||  ++..........       
T Consensus       456 L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFG--la~~~~~~~~~~-------  526 (635)
T 4fl3_A          456 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG--LSKALRADENYY-------  526 (635)
T ss_dssp             HHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTT--HHHHTTC------------
T ss_pred             HHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcC--CccccccCcccc-------
Confidence            99999764 69999999999999999999999999999999999999999999999999  554222111100       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       527 --------------------------------------------------------------------------------  526 (635)
T 4fl3_A          527 --------------------------------------------------------------------------------  526 (635)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......||+.|+|||++.+..+...+|+||+|+++|||++ |..      
T Consensus       527 -----------------------------~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~------  571 (635)
T 4fl3_A          527 -----------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK------  571 (635)
T ss_dssp             -------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC------
T ss_pred             -----------------------------ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC------
Confidence                                         00122356788999999999888899999999999999998 887      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       572 ---Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          572 ---PYRG-MKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             ---SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence               8877 666777777777755444  3458899999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.9e-35  Score=294.61  Aligned_cols=233  Identities=20%  Similarity=0.300  Sum_probs=193.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC-EEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-ELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++...  ...||+|.+....  ..+.+.+|+.++++++|+||+++++++.... ..++||||+++++|.+
T Consensus       201 lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~  276 (450)
T 1k9a_A          201 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  276 (450)
T ss_dssp             EEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHH
T ss_pred             ecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHH
Confidence            589999999998764  4589999886543  4567999999999999999999999987654 7999999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++...   .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++...    ...        
T Consensus       277 ~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG--~a~~~----~~~--------  342 (450)
T 1k9a_A          277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEA----SST--------  342 (450)
T ss_dssp             HHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCT--TCEEC----C----------
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCC--Ccccc----ccc--------
Confidence            99753   37999999999999999999999999999999999999999999999999  33310    000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       343 --------------------------------------------------------------------------------  342 (450)
T 1k9a_A          343 --------------------------------------------------------------------------------  342 (450)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~  315 (400)
                                                    .....+|+.|+|||++.+..+...+|+||+|+++|||++ |..       
T Consensus       343 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~-------  385 (450)
T 1k9a_A          343 ------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV-------  385 (450)
T ss_dssp             ----------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCC-------
T ss_pred             ------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCC-------
Confidence                                          011245778999999999888899999999999999998 876       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                        ||.. .+..+....+.++.....  +..+++.+.+||.+||+.||++|||+.++++
T Consensus       386 --P~~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          386 --PYPR-IPLKDVVPRVEKGYKMDA--PDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             --SSTT-SCTTTHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCCC-CCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence              8876 455555666666644433  4458899999999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5.6e-36  Score=286.65  Aligned_cols=242  Identities=17%  Similarity=0.254  Sum_probs=184.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||+++..  ...||+|.+..... ......+|+.++++++|+||+++++++....    .+++||||+++++
T Consensus        32 lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~  108 (322)
T 3soc_A           32 KARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS  108 (322)
T ss_dssp             EECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             ecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCC
Confidence            589999999999765  47889998865432 4455677999999999999999999998743    5799999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC----------CeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHSN----------QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~----------~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |.+++..+.+++..++.++.|++.||.|||+.          +++||||||+||+++.++.++|+|||  .+........
T Consensus       109 L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg--~a~~~~~~~~  186 (322)
T 3soc_A          109 LSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG--LALKFEAGKS  186 (322)
T ss_dssp             HHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT--TCEEECTTSC
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC--cccccccccC
Confidence            99999988899999999999999999999999          99999999999999999999999999  4431111000


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (322)
T 3soc_A          187 --------------------------------------------------------------------------------  186 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-----CCCcccCCCCccchhh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-----NKNQTTPPTGLTGSIL  301 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~d~~s~g~~~~  301 (400)
                                                           ........||+.|+|||++.+.     .+...+|+||+|+++|
T Consensus       187 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~  229 (322)
T 3soc_A          187 -------------------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW  229 (322)
T ss_dssp             -------------------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHH
Confidence                                                 0012234688999999988763     2224569999999999


Q ss_pred             hhcCCCCcccccccccCcchh---------------hcHHHHHHHHHhC-CCCCcch---hhhhcHHHHHHHHHhhhhhh
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFI---------------LSCRQALYLIATN-KKPEIKE---KEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~---------------~~~~~~~~~i~~~-~~~~~~~---~~~~s~~~~dli~~~L~~dP  362 (400)
                      ||++|..         ||...               .........+... ..+.++.   ....++.+.+||++||+.||
T Consensus       230 el~tg~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP  300 (322)
T 3soc_A          230 ELASRCT---------AADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA  300 (322)
T ss_dssp             HHHTTBT---------TSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSG
T ss_pred             HHHhCCC---------CCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCCh
Confidence            9999965         44321               1122222222222 2222222   12244569999999999999


Q ss_pred             hhhhcHHHHhc
Q psy9736         363 ETRASASLLLK  373 (400)
Q Consensus       363 ~~R~s~~~~l~  373 (400)
                      ++|||++++++
T Consensus       301 ~~Rps~~ell~  311 (322)
T 3soc_A          301 EARLSAGCVGE  311 (322)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.3e-36  Score=285.82  Aligned_cols=246  Identities=20%  Similarity=0.233  Sum_probs=193.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++... ....||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+++++|.++
T Consensus        47 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  125 (321)
T 2qkw_B           47 IGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH  125 (321)
T ss_dssp             SCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGG
T ss_pred             eecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHH
Confidence            689999999999864 4678999988766666678899999999999999999999999999999999999999999998


Q ss_pred             Hhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          81 VTET-----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        81 i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      +...     .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+........         
T Consensus       126 l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~---------  194 (321)
T 2qkw_B          126 LYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFG--ISKKGTELDQ---------  194 (321)
T ss_dssp             SSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCT--TCEECSSSSC---------
T ss_pred             HhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecc--cccccccccc---------
Confidence            8643     48999999999999999999999999999999999999999999999999  3331100000         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       195 --------------------------------------------------------------------------------  194 (321)
T 2qkw_B          195 --------------------------------------------------------------------------------  194 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  ........||+.|+|||++.+..+...+|.|++|+++|||++|..       
T Consensus       195 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~-------  239 (321)
T 2qkw_B          195 ----------------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS-------  239 (321)
T ss_dssp             ----------------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCT-------
T ss_pred             ----------------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCC-------
Confidence                                        001223468999999999988888899999999999999999976       


Q ss_pred             ccCcchhhc-----HHHHHHHHH-hCC-----CCCcc--hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCc
Q psy9736         316 LIPYLFILS-----CRQALYLIA-TNK-----KPEIK--EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP  375 (400)
Q Consensus       316 ~~P~~~~~~-----~~~~~~~i~-~~~-----~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp  375 (400)
                        ||.....     ......... .+.     .+.+.  .....+..+.+++.+||+.||++|||++++++|.
T Consensus       240 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          240 --AIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             --TCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             --cccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence              6654211     111111111 111     01111  1234677899999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=5.8e-36  Score=286.77  Aligned_cols=242  Identities=15%  Similarity=0.183  Sum_probs=191.7

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    +..++.+|++|.+.... ....+.+.+|+.+++.++|+||+++++++. +...++|+||+.++
T Consensus        21 lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~   99 (325)
T 3kex_A           21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLG   99 (325)
T ss_dssp             EECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTC
T ss_pred             eeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCC
Confidence            5889888888874    45667789999875432 222345678999999999999999999886 45688999999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  +.+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||  ++.........      
T Consensus       100 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg--~a~~~~~~~~~------  171 (325)
T 3kex_A          100 SLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFG--VADLLPPDDKQ------  171 (325)
T ss_dssp             BSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCS--GGGGSCCCTTC------
T ss_pred             CHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCC--cccccCccccc------
Confidence            99999875  368999999999999999999999999999999999999999999999999  44422111100      


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       172 --------------------------------------------------------------------------------  171 (325)
T 3kex_A          172 --------------------------------------------------------------------------------  171 (325)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                     .......||+.|+|||++.+..++..+|.||+|+++|+|++ |..    
T Consensus       172 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~----  216 (325)
T 3kex_A          172 -------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE----  216 (325)
T ss_dssp             -------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             -------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCC----
Confidence                                           01223467889999999998888899999999999999999 876    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. ....+....+..+.....  +..++..+.+||.+||..||++|||+.++++|
T Consensus       217 -----p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          217 -----PYAG-LRLAEVPDLLEKGERLAQ--PQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             -----TTTT-SCTTHHHHHHHTTCBCCC--CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             -----Cccc-cCHHHHHHHHHcCCCCCC--CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 7766 444555555555543333  33467789999999999999999999999886

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.5e-35  Score=283.99  Aligned_cols=240  Identities=17%  Similarity=0.237  Sum_probs=192.7

Q ss_pred             CCcceEEEEEecCCCceeE--EEEecccccc-CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFS--KILSNPITLA-QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~--~va~K~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+.....  .|++|.+... .....+.+.+|+.+++++ +|+||+++++++..++..++||||+++++
T Consensus        33 lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  112 (327)
T 1fvr_A           33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN  112 (327)
T ss_dssp             EECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             eecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCC
Confidence            5889999999997766554  3477776533 223456688999999999 99999999999999999999999999999


Q ss_pred             hHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          77 LTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        77 L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |.+++...                 .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.
T Consensus       113 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg--~~~  190 (327)
T 1fvr_A          113 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSR  190 (327)
T ss_dssp             HHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTT--CEE
T ss_pred             HHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccC--cCc
Confidence            99998653                 58999999999999999999999999999999999999999999999999  332


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ....    .                                                                       
T Consensus       191 ~~~~----~-----------------------------------------------------------------------  195 (327)
T 1fvr_A          191 GQEV----Y-----------------------------------------------------------------------  195 (327)
T ss_dssp             SSCE----E-----------------------------------------------------------------------
T ss_pred             cccc----c-----------------------------------------------------------------------
Confidence            0000    0                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                   .......+|+.|+|||++.+..+...+|.|++|++
T Consensus       196 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  230 (327)
T 1fvr_A          196 ---------------------------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  230 (327)
T ss_dssp             ---------------------------------------------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             ---------------------------------------------ccccCCCCCccccChhhhccccCCchhcchHHHHH
Confidence                                                         00112246788999999988877789999999999


Q ss_pred             hhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         300 ILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       300 ~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|+|++ |..         ||.. .+..+....+..+.....  +..++..+.+||.+||..||++|||+++++++
T Consensus       231 l~ellt~g~~---------pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          231 LWEIVSLGGT---------PYCG-MTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHHHHTTSCC---------TTTT-CCHHHHHHHGGGTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCC---------CCCC-CcHHHHHHHhhcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999998 876         7766 555666666665543333  34578899999999999999999999999876

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.7e-35  Score=281.40  Aligned_cols=244  Identities=18%  Similarity=0.265  Sum_probs=196.2

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCC-EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGE-ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~-~~~lv~e~~   72 (400)
                      ||+|+|+.||++.     +......||+|.+..... ...+.+.+|+.+++++ +|+||+++++++...+ ..++++||+
T Consensus        35 lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~  114 (316)
T 2xir_A           35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  114 (316)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECC
T ss_pred             EcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcC
Confidence            5889999999986     456678899998865433 2346789999999999 7999999999987654 589999999


Q ss_pred             CCCChHHHHhhcC-----------------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccch
Q psy9736          73 PGGSLTDVVTETC-----------------MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        73 ~~~~L~~~i~~~~-----------------l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~  135 (400)
                      ++++|.+++....                 +++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+||| 
T Consensus       115 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg-  193 (316)
T 2xir_A          115 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG-  193 (316)
T ss_dssp             TTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCG-
T ss_pred             CCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCc-
Confidence            9999999997542                 7899999999999999999999999999999999999999999999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       .+..........                                                                   
T Consensus       194 -~~~~~~~~~~~~-------------------------------------------------------------------  205 (316)
T 2xir_A          194 -LARDIYKDPDYV-------------------------------------------------------------------  205 (316)
T ss_dssp             -GGSCTTTCTTSE-------------------------------------------------------------------
T ss_pred             -cccccccCccce-------------------------------------------------------------------
Confidence             443211110000                                                                   


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                        ......||+.|+|||++.+..+...+|.||
T Consensus       206 --------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~s  235 (316)
T 2xir_A          206 --------------------------------------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWS  235 (316)
T ss_dssp             --------------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             --------------------------------------------------eccCCCcceeecCchhhccccccchhHHHH
Confidence                                                              012235688899999999888888999999


Q ss_pred             ccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         296 LTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       296 ~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|+++|+|++ |..         ||............+..+.....  +..+++.+.++|.+||+.||++|||++++++|
T Consensus       236 lG~il~~l~t~g~~---------p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          236 FGVLLWEIFSLGAS---------PYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHHHHTTSCC---------SSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhCCCC---------CCcccchhHHHHHHhccCccCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999998 776         88664444455555555544333  33478899999999999999999999999986

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.6e-35  Score=278.18  Aligned_cols=244  Identities=17%  Similarity=0.227  Sum_probs=191.7

Q ss_pred             CCcceEEEE----EecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccC
Q psy9736           1 MKRGVTIDR----FSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v----~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~   73 (400)
                      ||+|+|+.|    +.+.+......||+|.+..... ...+.+.+|+.++++++|+||+++++++...  ..+++||||++
T Consensus        39 lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~  118 (318)
T 3lxp_A           39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP  118 (318)
T ss_dssp             EEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCT
T ss_pred             ecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEeccc
Confidence            588999999    5567777888899999875532 3457789999999999999999999999874  58899999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +++|.+++....+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........     
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg--~a~~~~~~~~~~-----  191 (318)
T 3lxp_A          119 LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG--LAKAVPEGHEYY-----  191 (318)
T ss_dssp             TCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGG--GCEECCTTCSEE-----
T ss_pred             CCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcc--cccccccccccc-----
Confidence            9999999998889999999999999999999999999999999999999999999999999  443111110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       192 --------------------------------------------------------------------------------  191 (318)
T 3lxp_A          192 --------------------------------------------------------------------------------  191 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     .......||+.|+|||++.+..+...+|.|++|+++|+|++|..     
T Consensus       192 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~-----  235 (318)
T 3lxp_A          192 -------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD-----  235 (318)
T ss_dssp             -------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC-----
T ss_pred             -------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCC-----
Confidence                                           00122357888999999998877788999999999999999975     


Q ss_pred             ccccCcchhhcH--------------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSC--------------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~--------------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||......              ......+..+....  .+..++..+.+||++||+.||++|||++++++
T Consensus       236 ----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          236 ----SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP--RPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             ----GGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----cccccchhhhhhhcccccchhHHHHHHHHhcccCCC--CCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                66542111              12222223332222  24558889999999999999999999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=8.2e-36  Score=297.28  Aligned_cols=245  Identities=19%  Similarity=0.238  Sum_probs=177.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|++|+.+ +...+..||+|.+...   ..+.+.+|+.+++++ +|+||+++++++.+++..++||||+. ++|.+
T Consensus        23 LG~G~~g~V~~~-~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~   97 (434)
T 2rio_A           23 LGYGSSGTVVFQ-GSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD   97 (434)
T ss_dssp             EEECSTTCEEEE-EESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred             EeeCCCeEEEEE-EEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence            578888877653 2334567888876533   235678999999886 89999999999999999999999995 69999


Q ss_pred             HHhhcCC--------CHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-------------CceEEeccchhhh
Q psy9736          80 VVTETCM--------DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-------------GSVKLSKWNRFIA  138 (400)
Q Consensus        80 ~i~~~~l--------~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-------------~~~~l~dfg~~~~  138 (400)
                      ++.....        .+..+..++.|++.||.|||+.+|+||||||+||+++..             +.++|+|||  ++
T Consensus        98 ~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG--~a  175 (434)
T 2rio_A           98 LVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG--LC  175 (434)
T ss_dssp             HHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT--TC
T ss_pred             HHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc--cc
Confidence            9976422        222456799999999999999999999999999999754             479999999  44


Q ss_pred             hhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccc
Q psy9736         139 TKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSY  218 (400)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (400)
                      ..........                                                                      
T Consensus       176 ~~~~~~~~~~----------------------------------------------------------------------  185 (434)
T 2rio_A          176 KKLDSGQSSF----------------------------------------------------------------------  185 (434)
T ss_dssp             EECCC---------------------------------------------------------------------------
T ss_pred             eecCCCCccc----------------------------------------------------------------------
Confidence            3221111000                                                                      


Q ss_pred             cccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-------CCCCccc
Q psy9736         219 LVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-------KNKNQTT  291 (400)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~  291 (400)
                                                                   ........||+.|+|||++.+       ..++..+
T Consensus       186 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  220 (434)
T 2rio_A          186 ---------------------------------------------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI  220 (434)
T ss_dssp             ------------------------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHH
T ss_pred             ---------------------------------------------eeeecCCCCCCCccCHHHhccccccccccCcchhh
Confidence                                                         001223478999999999876       4566889


Q ss_pred             CCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCC--CCc--chhhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         292 PPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKK--PEI--KEKEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       292 d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~--~~~--~~~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                      |+||+|+++|||++ |..         ||.......   ..+..+..  +..  .....++..+.+||.+||+.||++||
T Consensus       221 DiwSlG~il~ellt~g~~---------Pf~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  288 (434)
T 2rio_A          221 DIFSMGCVFYYILSKGKH---------PFGDKYSRE---SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP  288 (434)
T ss_dssp             HHHHHHHHHHHHHTTSCC---------TTCSTTTHH---HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSC
T ss_pred             hhHhHHHHHHHHHhCCCC---------CCCCchhhH---HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCC
Confidence            99999999999998 765         776533322   23333321  111  11234678899999999999999999


Q ss_pred             cHHHHhcCccccc
Q psy9736         367 SASLLLKHPFLKI  379 (400)
Q Consensus       367 s~~~~l~hp~~~~  379 (400)
                      |++++++||||+.
T Consensus       289 s~~eil~hp~f~~  301 (434)
T 2rio_A          289 TAMKVLRHPLFWP  301 (434)
T ss_dssp             CHHHHHTSGGGSC
T ss_pred             CHHHHHhCCccCC
Confidence            9999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.7e-35  Score=281.85  Aligned_cols=254  Identities=19%  Similarity=0.216  Sum_probs=192.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+......||+|.+........+.+.+|+.+++.++|+||+++++++..    ....++++||+++++
T Consensus        37 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~  116 (317)
T 2buj_A           37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGT  116 (317)
T ss_dssp             EEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCB
T ss_pred             ecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCc
Confidence            5899999999999888888999998866555567889999999999999999999999873    347899999999999


Q ss_pred             hHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          77 LTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        77 L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      |.+++..     ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+............ 
T Consensus       117 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg--~~~~~~~~~~~~~~-  193 (317)
T 2buj_A          117 LWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG--SMNQACIHVEGSRQ-  193 (317)
T ss_dssp             HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCS--SCEESCEEEESHHH-
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecC--cchhcccccccccc-
Confidence            9998874     469999999999999999999999999999999999999999999999999  43322111110000 


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                       .. .                 .         
T Consensus       194 -------------------------------------------------~~-~-----------------~---------  197 (317)
T 2buj_A          194 -------------------------------------------------AL-T-----------------L---------  197 (317)
T ss_dssp             -------------------------------------------------HH-H-----------------H---------
T ss_pred             -------------------------------------------------cc-c-----------------c---------
Confidence                                                             00 0                 0         


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC---CCcccCCCCccchhhhhcCCCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN---KNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                       .......||+.|+|||++....   +...+|+|++|+++|+|++|..
T Consensus       198 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  244 (317)
T 2buj_A          198 ---------------------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG  244 (317)
T ss_dssp             ---------------------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence                                             0011225788999999887543   4578999999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                               ||................. ...+....++..+.+||.+||+.||++|||+++++++-.
T Consensus       245 ---------p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~  302 (317)
T 2buj_A          245 ---------PYDMVFQKGDSVALAVQNQ-LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE  302 (317)
T ss_dssp             ---------TTHHHHHTTSCHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ---------ChhhhhcccchhhHHhhcc-CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence                     7755221111112222221 122223457889999999999999999999999998643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-35  Score=282.38  Aligned_cols=244  Identities=14%  Similarity=0.183  Sum_probs=194.2

Q ss_pred             CCcceEEEEEecCCC----ceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDR----RFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~----~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+++.||++...    ....+||+|.+..... ...+.+.+|+.++++++|+||+++++++...+..++||||++++
T Consensus        52 lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  131 (333)
T 1mqb_A           52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG  131 (333)
T ss_dssp             EEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             EecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCC
Confidence            578888888887543    3356789998865432 34567889999999999999999999999889999999999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++..  ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+..........     
T Consensus       132 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~~~~~~~~~~~~-----  204 (333)
T 1mqb_A          132 ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG--LSRVLEDDPEAT-----  204 (333)
T ss_dssp             EHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCC--C----------------
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCC--cchhhccccccc-----
Confidence            99999975  369999999999999999999999999999999999999999999999999  443221111000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       205 --------------------------------------------------------------------------------  204 (333)
T 1mqb_A          205 --------------------------------------------------------------------------------  204 (333)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                     .......+|+.|+|||++....+...+|.|++|+++|||++ |..    
T Consensus       205 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~----  249 (333)
T 1mqb_A          205 -------------------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER----  249 (333)
T ss_dssp             -------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             -------------------------------cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCC----
Confidence                                           00111246788999999998888889999999999999998 876    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++||++++++++
T Consensus       250 -----pf~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          250 -----PYWE-LSNHEVMKAINDGFRLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             -----TTTT-CCHHHHHHHHHTTCCCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             -----Cccc-CCHHHHHHHHHCCCcCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 8866 555666666666543332  34578899999999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.2e-36  Score=283.99  Aligned_cols=240  Identities=21%  Similarity=0.282  Sum_probs=189.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc------hHHHHHHHHHHHHhC----CCCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP------KKELIINEILVMREN----KHPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~------~~~~~~~Ei~~l~~l----~h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ||+|+++.||++.+......||+|.+......      ....+.+|+.+++++    +|+||+++++++..++..++++|
T Consensus        39 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e  118 (312)
T 2iwi_A           39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE  118 (312)
T ss_dssp             EEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEE
T ss_pred             EEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEE
Confidence            58999999999988888888999988654321      223456799999998    89999999999998889999999


Q ss_pred             c-cCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec-CCCceEEeccchhhhhhhccccch
Q psy9736          71 Y-LPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        71 ~-~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      + +.+++|.+++... .+++..++.++.|++.||.|||+.+++|+||||+||+++ .++.++|+|||  .+.....    
T Consensus       119 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg--~~~~~~~----  192 (312)
T 2iwi_A          119 RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHD----  192 (312)
T ss_dssp             CCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS--SCEECCS----
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc--hhhhccc----
Confidence            9 7889999998754 699999999999999999999999999999999999999 78999999999  3321100    


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .                                                                               
T Consensus       193 ~-------------------------------------------------------------------------------  193 (312)
T 2iwi_A          193 E-------------------------------------------------------------------------------  193 (312)
T ss_dssp             S-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~g  306 (400)
                                                            ......||+.|+|||++.+..+. ..+|.|++|+++|+|++|
T Consensus       194 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          194 --------------------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             --------------------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             --------------------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC
Confidence                                                  01223588899999998876665 478999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                      ..         ||....       .+..... .+  +..++..+.+||.+||+.||++|||++++++||||+....
T Consensus       236 ~~---------pf~~~~-------~~~~~~~-~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          236 DI---------PFERDQ-------EILEAEL-HF--PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             SC---------SCCSHH-------HHHHTCC-CC--CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CC---------CCCChH-------HHhhhcc-CC--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            87         876521       1222221 12  3457889999999999999999999999999999997554

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.9e-35  Score=282.42  Aligned_cols=243  Identities=18%  Similarity=0.243  Sum_probs=192.0

Q ss_pred             CCcceEEEEEecCCCce-----eEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRF-----FSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-----~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||.+.+...     ..+|++|.+..... ...+.+.+|+.+++.+ +|+||+++++++..++..++||||++
T Consensus        54 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~  133 (333)
T 2i1m_A           54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC  133 (333)
T ss_dssp             EEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCC
Confidence            58899999999875433     34788888765432 3457789999999999 89999999999999899999999999


Q ss_pred             CCChHHHHhh---------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhh
Q psy9736          74 GGSLTDVVTE---------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIA  138 (400)
Q Consensus        74 ~~~L~~~i~~---------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~  138 (400)
                      +++|.+++..               ..+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||  .+
T Consensus       134 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg--~~  211 (333)
T 2i1m_A          134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG--LA  211 (333)
T ss_dssp             TEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCG--GG
T ss_pred             CCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccc--cc
Confidence            9999998863               247899999999999999999999999999999999999999999999999  44


Q ss_pred             hhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccc
Q psy9736         139 TKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSY  218 (400)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (400)
                      ..........                                                                      
T Consensus       212 ~~~~~~~~~~----------------------------------------------------------------------  221 (333)
T 2i1m_A          212 RDIMNDSNYI----------------------------------------------------------------------  221 (333)
T ss_dssp             CCGGGCTTSE----------------------------------------------------------------------
T ss_pred             ccccccccee----------------------------------------------------------------------
Confidence            3221110000                                                                      


Q ss_pred             cccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccc
Q psy9736         219 LVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTG  298 (400)
Q Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~  298 (400)
                                                                     ......||+.|+|||++.+..+...+|+||+|+
T Consensus       222 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  254 (333)
T 2i1m_A          222 -----------------------------------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI  254 (333)
T ss_dssp             -----------------------------------------------ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             -----------------------------------------------ecCCCCCCccccCHHHhccCCCChHHHHHHHHH
Confidence                                                           012235678899999999888889999999999


Q ss_pred             hhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         299 SILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       299 ~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      ++|||++ |..         ||............+..+.....  +...+..+.+||.+||+.||++|||+.++++
T Consensus       255 il~el~t~g~~---------p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          255 LLWEIFSLGLN---------PYPGILVNSKFYKLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHTTTSCC---------SSTTCCSSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCC---------CCcccchhHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            9999998 665         77663333333333333332222  3346788999999999999999999999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=4e-36  Score=287.39  Aligned_cols=241  Identities=17%  Similarity=0.218  Sum_probs=195.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc------hHHHHHHHHHHHHhCC--CCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP------KKELIINEILVMRENK--HPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~------~~~~~~~Ei~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+......||+|.+......      ..+.+.+|+.+++++.  |+||+++++++..++..++++|++
T Consensus        51 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~  130 (320)
T 3a99_A           51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP  130 (320)
T ss_dssp             CSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcC
Confidence            69999999999987777788888887644221      2244678999999995  599999999999999999999999


Q ss_pred             CC-CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec-CCCceEEeccchhhhhhhccccchhh
Q psy9736          73 PG-GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        73 ~~-~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+ ++|.+++.. +.+++..++.++.|++.||.|||+.+++||||||+||+++ .++.++|+|||  .+.....    . 
T Consensus       131 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg--~~~~~~~----~-  203 (320)
T 3a99_A          131 EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKD----T-  203 (320)
T ss_dssp             SSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCT--TCEECCS----S-
T ss_pred             CCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCc--ccccccc----c-
Confidence            75 799998875 4799999999999999999999999999999999999999 67999999999  3331100    0 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       204 --------------------------------------------------------------------------------  203 (320)
T 3a99_A          204 --------------------------------------------------------------------------------  203 (320)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                          ......||+.|+|||++.+..+. ..+|.|++|+++|||++|..
T Consensus       204 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          204 ------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             ------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence                                                01223588999999998877653 66799999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCC
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL  383 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~  383 (400)
                               ||....       .+..+...   .+..+++.+.+||++||+.||++|||++++++||||+....+
T Consensus       248 ---------pf~~~~-------~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          248 ---------PFEHDE-------EIIRGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             ---------SCCSHH-------HHHHCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred             ---------CCCChh-------hhhccccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence                     876521       12223211   133478899999999999999999999999999999976543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.6e-35  Score=281.79  Aligned_cols=246  Identities=16%  Similarity=0.174  Sum_probs=193.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+.....  .+.+.+|+.+++++ +|+||+++++++..+...++||||+ +++|.+
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (330)
T 2izr_A           17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLED   93 (330)
T ss_dssp             CCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             eeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHH
Confidence            6899999999999888888999998764432  24578999999999 9999999999999999999999999 899999


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc-----eEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS-----VKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++..  +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.     ++|+|||  ++..........    
T Consensus        94 ~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg--~a~~~~~~~~~~----  167 (330)
T 2izr_A           94 LFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA--LAKEYIDPETKK----  167 (330)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCT--TCEESBCTTTCC----
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcc--cceeeecCCCCc----
Confidence            9984  57999999999999999999999999999999999999999887     9999999  444221111100    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                           .          
T Consensus       168 ---------------------------------------------------------------------~----------  168 (330)
T 2izr_A          168 ---------------------------------------------------------------------H----------  168 (330)
T ss_dssp             ---------------------------------------------------------------------B----------
T ss_pred             ---------------------------------------------------------------------c----------
Confidence                                                                                 0          


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                   ..........||+.|+|||++.+..+...+|.||+|+++|||++|..    
T Consensus       169 -----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~----  215 (330)
T 2izr_A          169 -----------------------------IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSL----  215 (330)
T ss_dssp             -----------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             -----------------------------ccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCC----
Confidence                                         00011345589999999999999888889999999999999999987    


Q ss_pred             cccccCcchh--hcHHHHHHHHHhCCCCCcch--hhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFI--LSCRQALYLIATNKKPEIKE--KEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~--~~~~~~~~~i~~~~~~~~~~--~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||...  ....+.+..+.....+....  ...++ .+.+||..||+.||++||+++++++
T Consensus       216 -----Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          216 -----PWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -----TTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -----CccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                 88763  23344444443322111111  11234 8999999999999999999998865

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.4e-35  Score=278.07  Aligned_cols=243  Identities=14%  Similarity=0.204  Sum_probs=186.8

Q ss_pred             CCcceEEEEEecC---CCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEe
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e   70 (400)
                      ||+|+++.||++.   +......||+|.+....  ....+.+.+|+.++++++|+||+++++++....     ..++++|
T Consensus        42 lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e  121 (313)
T 3brb_A           42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILP  121 (313)
T ss_dssp             EEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEE
T ss_pred             eeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEe
Confidence            5788888888664   44467789999887553  233467899999999999999999999988654     3599999


Q ss_pred             ccCCCChHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          71 YLPGGSLTDVVTE-------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        71 ~~~~~~L~~~i~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      |+++++|.+++..       ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||  .+.....
T Consensus       122 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg--~~~~~~~  199 (313)
T 3brb_A          122 FMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG--LSKKIYS  199 (313)
T ss_dssp             CCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCS--CC-----
T ss_pred             cccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecC--cceeccc
Confidence            9999999998842       358999999999999999999999999999999999999999999999999  4331111


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      ....                                                                            
T Consensus       200 ~~~~----------------------------------------------------------------------------  203 (313)
T 3brb_A          200 GDYY----------------------------------------------------------------------------  203 (313)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccc----------------------------------------------------------------------------
Confidence            0000                                                                            


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                               .......+++.|+|||++.+..+...+|.||+|+++|+|
T Consensus       204 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  242 (313)
T 3brb_A          204 -----------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  242 (313)
T ss_dssp             ------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHH
Confidence                                                     001223567889999999988888899999999999999


Q ss_pred             cC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         304 LG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       304 ~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ++ |..         ||.. .+.......+..+..+..  +..++..+.+||.+||..||++|||+.+++++
T Consensus       243 ~~~g~~---------p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          243 ATRGMT---------PYPG-VQNHEMYDYLLHGHRLKQ--PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HTTSCC---------SSTT-CCGGGHHHHHHTTCCCCC--BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCC---------CCcc-CCHHHHHHHHHcCCCCCC--CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99 665         6655 455555555666644443  34578899999999999999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=284.57  Aligned_cols=249  Identities=18%  Similarity=0.171  Sum_probs=185.7

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEeccccccCcc-----------hHHHHHHHHHHHHhCCCCCcccccceeEe----C
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLAQQP-----------KKELIINEILVMRENKHPNIVNYLDSYLV----G   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~~~~-----------~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~   62 (400)
                      ||+|+|+.||++.+..   ....+++|........           ..+.+.+|+.+++.++|+||+++++++..    +
T Consensus        45 lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~  124 (345)
T 2v62_A           45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGR  124 (345)
T ss_dssp             C------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSC
T ss_pred             EeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCC
Confidence            6899999999998765   6778888887654321           11336678888999999999999999987    6


Q ss_pred             CEEEEEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC--ceEEeccchhhhh
Q psy9736          63 EELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG--SVKLSKWNRFIAT  139 (400)
Q Consensus        63 ~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~--~~~l~dfg~~~~~  139 (400)
                      ...++||||+ +++|.+++... .+++..++.++.|++.||.|||+++|+||||||+||+++.++  .++|+|||  .+.
T Consensus       125 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg--~a~  201 (345)
T 2v62_A          125 SYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYG--LSY  201 (345)
T ss_dssp             EEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCT--TCE
T ss_pred             cEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCC--Cce
Confidence            7899999999 99999999754 799999999999999999999999999999999999999887  99999999  444


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      .........                                                                       
T Consensus       202 ~~~~~~~~~-----------------------------------------------------------------------  210 (345)
T 2v62_A          202 RYCPNGNHK-----------------------------------------------------------------------  210 (345)
T ss_dssp             ESSGGGCCC-----------------------------------------------------------------------
T ss_pred             ecccccccc-----------------------------------------------------------------------
Confidence            221111000                                                                       


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                               .....+.....||+.|+|||++.+..+...+|+||+|++
T Consensus       211 -----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  249 (345)
T 2v62_A          211 -----------------------------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYC  249 (345)
T ss_dssp             -----------------------------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHH
T ss_pred             -----------------------------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHH
Confidence                                                     000011234579999999999999888899999999999


Q ss_pred             hhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchh-------hhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEK-------EKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       300 ~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                      +|||++|..         ||..................+.++..       ..++..+.+||.+||+.||++|||+++++
T Consensus       250 l~ell~g~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~  320 (345)
T 2v62_A          250 MLRWLCGKL---------PWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALK  320 (345)
T ss_dssp             HHHHHHSSC---------TTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             HHHHHhCCC---------CccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            999999987         88553322222222221111111111       15788999999999999999999999987


Q ss_pred             c
Q psy9736         373 K  373 (400)
Q Consensus       373 ~  373 (400)
                      +
T Consensus       321 ~  321 (345)
T 2v62_A          321 K  321 (345)
T ss_dssp             H
T ss_pred             H
Confidence            6

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=3e-35  Score=277.82  Aligned_cols=251  Identities=16%  Similarity=0.237  Sum_probs=185.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh--CCCCCcccccceeEeC----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVG----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~~~~~~~~~----~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++..  ....||+|.+...   ..+.+.+|.+++..  ++|+||+++++++...    ...++||||+++
T Consensus        16 lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~   90 (301)
T 3q4u_A           16 VGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM   90 (301)
T ss_dssp             EEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred             eccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence            58999999999876  3567899987543   34556778887777  7999999999986542    468999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHH--------hCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLH--------SNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH--------~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ++|.++++...+++..+..++.|++.||.|||        +.+++||||||+||+++.++.++|+|||  ++........
T Consensus        91 g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg--~a~~~~~~~~  168 (301)
T 3q4u_A           91 GSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG--LAVMHSQSTN  168 (301)
T ss_dssp             CBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT--TCEEEETTTT
T ss_pred             CCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC--Ceeecccccc
Confidence            99999998888999999999999999999999        8999999999999999999999999999  4431111110


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ..                                                                              
T Consensus       169 ~~------------------------------------------------------------------------------  170 (301)
T 3q4u_A          169 QL------------------------------------------------------------------------------  170 (301)
T ss_dssp             EE------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC------CCcccCCCCccchh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN------KNQTTPPTGLTGSI  300 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~d~~s~g~~~  300 (400)
                                                           ........||+.|+|||++.+..      ++..+|+||+|+++
T Consensus       171 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il  213 (301)
T 3q4u_A          171 -------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL  213 (301)
T ss_dssp             -------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             -------------------------------------cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHH
Confidence                                                 00122347889999999988752      23578999999999


Q ss_pred             hhhcCCCC-cccccccccCcchhh---cHHHHHHHHHh--CCCCCcch---hhhhcHHHHHHHHHhhhhhhhhhhcHHHH
Q psy9736         301 LEFLGPHK-WSFQPHFLIPYLFIL---SCRQALYLIAT--NKKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLL  371 (400)
Q Consensus       301 ~~~~~gd~-ws~g~~~~~P~~~~~---~~~~~~~~i~~--~~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s~~~~  371 (400)
                      |||++|.. +..-.....||....   ...........  ...+.++.   ....+..+.+||.+||+.||++|||++++
T Consensus       214 ~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i  293 (301)
T 3q4u_A          214 WEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI  293 (301)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence            99999922 111011134775521   22233333322  22233322   23366789999999999999999999999


Q ss_pred             hc
Q psy9736         372 LK  373 (400)
Q Consensus       372 l~  373 (400)
                      ++
T Consensus       294 ~~  295 (301)
T 3q4u_A          294 KK  295 (301)
T ss_dssp             HH
T ss_pred             HH
Confidence            86

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=8.1e-35  Score=272.17  Aligned_cols=238  Identities=14%  Similarity=0.223  Sum_probs=192.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+++.||.+... ...+|++|.+..... ..+.+.+|+.++++++|+||+++++++. ++..+++|||+++++|.++
T Consensus        21 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~   97 (279)
T 1qpc_A           21 LGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDF   97 (279)
T ss_dssp             EEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHH
T ss_pred             ecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHH
Confidence            588999999998754 245688888765433 4677899999999999999999999886 4568999999999999999


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........          
T Consensus        98 l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~----------  165 (279)
T 1qpc_A           98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG--LARLIEDNEYT----------  165 (279)
T ss_dssp             TTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT--TCEECSSSCEE----------
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCc--ccccccCcccc----------
Confidence            9743   69999999999999999999999999999999999999999999999999  33311110000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (279)
T 1qpc_A          166 --------------------------------------------------------------------------------  165 (279)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......+|+.|+|||++.+..+...+|.|++|+++|||++ |..        
T Consensus       166 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~--------  209 (279)
T 1qpc_A          166 ----------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI--------  209 (279)
T ss_dssp             ----------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC--------
T ss_pred             ----------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC--------
Confidence                                        0112246778999999988777788999999999999999 776        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. .+..+....+..+.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       210 -p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          210 -PYPG-MTNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             -SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCcc-cCHHHHHHHHhcccCCCC--cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             7766 555566666666544333  3457889999999999999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6e-35  Score=292.53  Aligned_cols=244  Identities=16%  Similarity=0.253  Sum_probs=196.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++..... .+||+|.+..... ..+.+.+|+.++++++|+||+++++++.. +..++||||+++++|.++
T Consensus       192 lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~  268 (452)
T 1fmk_A          192 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF  268 (452)
T ss_dssp             EEECSSCEEEEEEETTT-EEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHH
T ss_pred             ecCCCCeEEEEEEECCC-ceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHH
Confidence            58999999999877653 4689998875443 45789999999999999999999998865 678999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++.........          
T Consensus       269 l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG--~a~~~~~~~~~----------  336 (452)
T 1fmk_A          269 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG--LARLIEDNEYT----------  336 (452)
T ss_dssp             HSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC--TTC------------------
T ss_pred             HHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCc--cceecCCCcee----------
Confidence            974   358999999999999999999999999999999999999999999999999  44322110000          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       337 --------------------------------------------------------------------------------  336 (452)
T 1fmk_A          337 --------------------------------------------------------------------------------  336 (452)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                  ......+|+.|+|||++....+...+|+||+|+++|||++ |..        
T Consensus       337 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~--------  380 (452)
T 1fmk_A          337 ----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV--------  380 (452)
T ss_dssp             ----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC--------
T ss_pred             ----------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCC--------
Confidence                                        0112246778999999998888899999999999999999 776        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC--ccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH--PFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h--p~~~~  379 (400)
                       ||.. .+..+....+..+.....  +..+++.+.+||.+||+.||++|||++++++.  .++..
T Consensus       381 -P~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          381 -PYPG-MVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             -SSTT-CCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence             8776 666677777776654333  34578899999999999999999999998762  44443

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.1e-35  Score=273.13  Aligned_cols=233  Identities=15%  Similarity=0.244  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeC--CEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVG--EELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++.+.  ...||+|.+....  ....+.+.+|+.++++++|+||+++++++...  ...+++|||+++++
T Consensus        18 lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~   95 (271)
T 3kmu_A           18 LNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS   95 (271)
T ss_dssp             EEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCB
T ss_pred             hcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCc
Confidence            588999999999875  5668888876543  23456789999999999999999999999876  78899999999999


Q ss_pred             hHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          77 LTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        77 L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      |.+++...   .+++..+..++.|++.||.|||+.+  ++|+||||+||+++.++.+++.|||  .+.    ...     
T Consensus        96 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~--~~~----~~~-----  164 (271)
T 3kmu_A           96 LYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMAD--VKF----SFQ-----  164 (271)
T ss_dssp             HHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGG--SCC----TTS-----
T ss_pred             HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecc--cee----eec-----
Confidence            99999864   4899999999999999999999999  9999999999999999999999998  211    000     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (271)
T 3kmu_A          165 --------------------------------------------------------------------------------  164 (271)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc---ccCCCCccchhhhhcCCCC
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ---TTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~d~~s~g~~~~~~~~gd~  308 (400)
                                                         .....||+.|+|||++.+..+..   .+|.||+|+++|||++|..
T Consensus       165 -----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  209 (271)
T 3kmu_A          165 -----------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV  209 (271)
T ss_dssp             -----------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSC
T ss_pred             -----------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                                               11225788899999888755444   5899999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhC-CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATN-KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                               ||.. .+.......+... ..+.+  +..+++.+.+||.+||+.||++|||++++++
T Consensus       210 ---------p~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          210 ---------PFAD-LSNMEIGMKVALEGLRPTI--PPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             ---------TTTT-SCHHHHHHHHHHSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------Cccc-cChHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                     8877 5555555555444 33333  3458889999999999999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-34  Score=278.08  Aligned_cols=252  Identities=18%  Similarity=0.298  Sum_probs=186.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC--CCCCcccccceeEeC----CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN--KHPNIVNYLDSYLVG----EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l--~h~niv~~~~~~~~~----~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++...  ...||+|.+...   ....+.+|.+++..+  +|+||+++++++...    ...++||||+++
T Consensus        45 lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~  119 (337)
T 3mdy_A           45 IGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN  119 (337)
T ss_dssp             EEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTT
T ss_pred             eecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCC
Confidence            589999999998765  678899987533   234455666666654  999999999999877    789999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC--------CeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN--------QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ++|.+++....+++..+..++.|++.||.|||+.        +++||||||+||+++.++.++|+|||  .+........
T Consensus       120 g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg--~a~~~~~~~~  197 (337)
T 3mdy_A          120 GSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG--LAVKFISDTN  197 (337)
T ss_dssp             CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT--TCEECC----
T ss_pred             CcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCC--Cceeeccccc
Confidence            9999999988899999999999999999999998        99999999999999999999999999  4432211111


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ..                                                                              
T Consensus       198 ~~------------------------------------------------------------------------------  199 (337)
T 3mdy_A          198 EV------------------------------------------------------------------------------  199 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcc------cCCCCccchh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQT------TPPTGLTGSI  300 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~d~~s~g~~~  300 (400)
                                                           ..+.....||+.|+|||++.+..+...      +|+||+|+++
T Consensus       200 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il  242 (337)
T 3mdy_A          200 -------------------------------------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL  242 (337)
T ss_dssp             ----------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH
T ss_pred             -------------------------------------cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH
Confidence                                                 001234478999999999987666554      8999999999


Q ss_pred             hhhcCCCC-cccccccccCcchh---hcHHHHHHHHHhC--CCCCcch---hhhhcHHHHHHHHHhhhhhhhhhhcHHHH
Q psy9736         301 LEFLGPHK-WSFQPHFLIPYLFI---LSCRQALYLIATN--KKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLL  371 (400)
Q Consensus       301 ~~~~~gd~-ws~g~~~~~P~~~~---~~~~~~~~~i~~~--~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s~~~~  371 (400)
                      |||++|.. +........||...   .............  ..+.++.   ...+++.+.+||.+||+.||++|||+.++
T Consensus       243 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  322 (337)
T 3mdy_A          243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV  322 (337)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence            99999932 11001112366542   1122333333222  2222222   23567789999999999999999999999


Q ss_pred             hcC
Q psy9736         372 LKH  374 (400)
Q Consensus       372 l~h  374 (400)
                      ++|
T Consensus       323 l~~  325 (337)
T 3mdy_A          323 KKT  325 (337)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-35  Score=286.81  Aligned_cols=246  Identities=15%  Similarity=0.198  Sum_probs=188.0

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeE-eCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYL-VGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++..   ......|++|.+.... ....+++.+|+.++++++|+||+++++++. .++..++||||++++
T Consensus        97 LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g  176 (373)
T 3c1x_A           97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG  176 (373)
T ss_dssp             EECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTC
T ss_pred             eeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCC
Confidence            58899999988763   3344668888876433 335678999999999999999999999865 456789999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||  ++..........     
T Consensus       177 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG--~a~~~~~~~~~~-----  249 (373)
T 3c1x_A          177 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG--LARDMYDKEFDS-----  249 (373)
T ss_dssp             BHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------------------
T ss_pred             CHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecc--cccccccccccc-----
Confidence            999999753  58899999999999999999999999999999999999999999999999  444221110000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       250 --------------------------------------------------------------------------------  249 (373)
T 3c1x_A          250 --------------------------------------------------------------------------------  249 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ........+|+.|+|||++.+..+...+|.||+|+++|||++|..     
T Consensus       250 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~-----  294 (373)
T 3c1x_A          250 ------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-----  294 (373)
T ss_dssp             --------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC-----
T ss_pred             ------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcC-----
Confidence                                          000122357789999999998888899999999999999999543     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                         .||.. .+..+....+..+.....  +..++..+.++|.+||+.||++|||+.+++++
T Consensus       295 ---~p~~~-~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          295 ---PPYPD-VNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             ---CSCTT-SCSSCHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               14443 555555555666544333  34578899999999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.2e-34  Score=272.74  Aligned_cols=241  Identities=19%  Similarity=0.324  Sum_probs=183.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||++.....   |++|.+....  ....+.+.+|+.++++++|+||++++++. .....+++|||+++++|.
T Consensus        32 lG~G~~g~Vy~~~~~~~---vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~  107 (289)
T 3og7_A           32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLY  107 (289)
T ss_dssp             EEECSSEEEEEEESSSE---EEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHH
T ss_pred             ecCCCCeEEEEEEEcCc---eEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHH
Confidence            58999999999977653   6777665443  23457789999999999999999999854 456789999999999999


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..  ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........         
T Consensus       108 ~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~~---------  176 (289)
T 3og7_A          108 HHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG--LATEKSRWSGS---------  176 (289)
T ss_dssp             HHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------------
T ss_pred             HHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccce--ecccccccccc---------
Confidence            99864  368999999999999999999999999999999999999999999999999  43311110000         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (289)
T 3og7_A          177 --------------------------------------------------------------------------------  176 (289)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee---cCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL---DKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  .......||+.|+|||++.   ...++..+|.||+|+++|+|++|..     
T Consensus       177 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~-----  223 (289)
T 3og7_A          177 ----------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL-----  223 (289)
T ss_dssp             -----------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCC-----
Confidence                                        0122346889999999987   4555568999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCC-Ccc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKP-EIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~-~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||....+.......+..+... .+. ....+++.+.+||.+||+.||++|||++++++
T Consensus       224 ----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          224 ----PYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             ----TTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                887744544444444444221 111 12457889999999999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=9.2e-35  Score=271.97  Aligned_cols=238  Identities=18%  Similarity=0.231  Sum_probs=192.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe----------------CCE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV----------------GEE   64 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----------------~~~   64 (400)
                      ||+|.++.||++.+......|++|.+....    +.+.+|+.++++++|+||+++++++..                ...
T Consensus        19 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (284)
T 2a19_B           19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKC   94 (284)
T ss_dssp             EECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEE
T ss_pred             eccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcce
Confidence            588999999999888778889999886543    346789999999999999999998864                345


Q ss_pred             EEEEEeccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          65 LWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        65 ~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      .+++|||+++++|.+++..   ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+...
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg--~~~~~  172 (284)
T 2a19_B           95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFG--LVTSL  172 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT--TCEES
T ss_pred             EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcch--hheec
Confidence            8999999999999999964   368999999999999999999999999999999999999999999999999  33211


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      ....                                                                            
T Consensus       173 ~~~~----------------------------------------------------------------------------  176 (284)
T 2a19_B          173 KNDG----------------------------------------------------------------------------  176 (284)
T ss_dssp             SCCS----------------------------------------------------------------------------
T ss_pred             cccc----------------------------------------------------------------------------
Confidence            0000                                                                            


Q ss_pred             ccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhh
Q psy9736         222 EELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~  301 (400)
                                                                  ......||+.|+|||++.+..+...+|.|++|+++|
T Consensus       177 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (284)
T 2a19_B          177 --------------------------------------------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA  212 (284)
T ss_dssp             --------------------------------------------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHH
T ss_pred             --------------------------------------------cccccCCcccccChhhhccCCCcchhhhHHHHHHHH
Confidence                                                        012236889999999999888889999999999999


Q ss_pred             hhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      +|++|..         |+....   .....+..+..     +..++..+.+||.+||+.||++|||+.++++|+|.-...
T Consensus       213 ~l~~~~~---------~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          213 ELLHVCD---------TAFETS---KFFTDLRDGII-----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHSCCS---------SHHHHH---HHHHHHHTTCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHhcCC---------cchhHH---HHHHHhhcccc-----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            9999975         665422   22222223221     233677899999999999999999999999998876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=299.54  Aligned_cols=248  Identities=17%  Similarity=0.231  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecCC--CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDD--RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~--~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++..  ......||+|.+.... ....+.+.+|+.++++++|+||+++++++.. +..++||||+++++|
T Consensus       344 LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBH
T ss_pred             EecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcH
Confidence            58999999998743  2345678999887543 2356789999999999999999999999875 568999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++..........       
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFG--la~~~~~~~~~~-------  493 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG--LSKALGADDSYY-------  493 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCS--TTTTCC-------------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeecc--CcccccCCCcee-------
Confidence            999864  369999999999999999999999999999999999999999999999999  444221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       494 --------------------------------------------------------------------------------  493 (613)
T 2ozo_A          494 --------------------------------------------------------------------------------  493 (613)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......+|+.|+|||++....+...+|+||+|+++|||++ |..      
T Consensus       494 -----------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~------  538 (613)
T 2ozo_A          494 -----------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK------  538 (613)
T ss_dssp             -------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC------
T ss_pred             -----------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC------
Confidence                                         00112245788999999998888899999999999999998 876      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH---hcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL---LKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~---l~hp~~~~  379 (400)
                         ||.. .+..+....+.++.....  +..+++.+.+||.+||+.||++|||++++   |++.|...
T Consensus       539 ---Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          539 ---PYKK-MKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             ---TTTT-CCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence               8877 566667777777755443  34588899999999999999999999997   55566554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.7e-35  Score=283.29  Aligned_cols=235  Identities=18%  Similarity=0.210  Sum_probs=175.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--------cchHHHHHHHHHHHHhCC------------------------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--------QPKKELIINEILVMRENK------------------------   48 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~Ei~~l~~l~------------------------   48 (400)
                      ||+|+|+.||++.+  ....||+|.+....        ....+.+.+|+.+++.++                        
T Consensus        28 lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~  105 (336)
T 2vuw_A           28 IGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQG  105 (336)
T ss_dssp             EEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEES
T ss_pred             ecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecC
Confidence            58999999999976  34778888876542        223477899999999886                        


Q ss_pred             --CCCcccccceeEe-------------CCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCeec
Q psy9736          49 --HPNIVNYLDSYLV-------------GEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLH-SNQVIH  112 (400)
Q Consensus        49 --h~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH-~~~ivH  112 (400)
                        |+||++++++|..             ++..|+||||+++|++.+.+..+.+++..++.++.||+.||.||| +.+|+|
T Consensus       106 ~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH  185 (336)
T 2vuw_A          106 SYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEH  185 (336)
T ss_dssp             SCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred             CCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeE
Confidence              5555666665554             678999999999987777776677999999999999999999999 899999


Q ss_pred             CCCCCCceEecCCC--------------------ceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccC
Q psy9736         113 RDIKSDNILLGLDG--------------------SVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTG  172 (400)
Q Consensus       113 ~dikp~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~  172 (400)
                      |||||+||+++.++                    .++|+|||  ++....                              
T Consensus       186 rDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG--~a~~~~------------------------------  233 (336)
T 2vuw_A          186 RDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYT--LSRLER------------------------------  233 (336)
T ss_dssp             SCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCT--TCBEEE------------------------------
T ss_pred             CCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeecc--ccEecC------------------------------
Confidence            99999999999887                    89999999  443110                              


Q ss_pred             CCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCC
Q psy9736         173 MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTP  252 (400)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (400)
                                                                                                      
T Consensus       234 --------------------------------------------------------------------------------  233 (336)
T 2vuw_A          234 --------------------------------------------------------------------------------  233 (336)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch-hhhhcCCCCcccccccccCcchhhcHHHHHHH
Q psy9736         253 PLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS-ILEFLGPHKWSFQPHFLIPYLFILSCRQALYL  331 (400)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~-~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~  331 (400)
                                    ....+||+.|+|||++.+.. ...+|+||+++. .++++.|..         ||............
T Consensus       234 --------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~---------p~~~~~~~~~~~~~  289 (336)
T 2vuw_A          234 --------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH---------PYSNVLWLHYLTDK  289 (336)
T ss_dssp             --------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC---------THHHHHHHHHHHHH
T ss_pred             --------------CCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC---------CCcchhhhhHHHHh
Confidence                          01226889999999998765 566777776555 455655544         77552111222223


Q ss_pred             HHhC----CCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHh-cCcccc
Q psy9736         332 IATN----KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLL-KHPFLK  378 (400)
Q Consensus       332 i~~~----~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l-~hp~~~  378 (400)
                      +...    ..+....+..+++.+.+||++||++|     |++|+| +||||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          290 MLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            3322    12222334568999999999999987     999999 999995

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=274.43  Aligned_cols=232  Identities=22%  Similarity=0.363  Sum_probs=186.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++...  +..|++|.+...  ...+.+.+|+.++++++|+||+++++++.+  ..++||||+++++|.++
T Consensus        16 lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~   89 (307)
T 2eva_A           16 VGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNV   89 (307)
T ss_dssp             EECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHHH
T ss_pred             eecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHHH
Confidence            588999999998764  467899987533  356779999999999999999999998873  47899999999999999


Q ss_pred             Hhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCCCceEecCCCc-eEEeccchhhhhhhccccchhhccc
Q psy9736          81 VTET----CMDEGQIAAVCREVLQALEFLHS---NQVIHRDIKSDNILLGLDGS-VKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        81 i~~~----~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +...    .++...+..++.|++.||.|||+   ++++||||||+||+++.++. ++|+|||  .+......        
T Consensus        90 l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg--~~~~~~~~--------  159 (307)
T 2eva_A           90 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG--TACDIQTH--------  159 (307)
T ss_dssp             HHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC--C---------------
T ss_pred             HhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc--cccccccc--------
Confidence            9753    47899999999999999999999   89999999999999998886 7999999  33211000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (307)
T 2eva_A          160 --------------------------------------------------------------------------------  159 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                        .....||+.|+|||++.+..+...+|+||+|+++|||++|..    
T Consensus       160 ----------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~----  201 (307)
T 2eva_A          160 ----------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK----  201 (307)
T ss_dssp             ---------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCC----
T ss_pred             ----------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCC----
Confidence                                              111258889999999998888889999999999999999987    


Q ss_pred             cccccCcchhh-cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFIL-SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||.... ........+..+..+..  ...++..+.+||.+||+.||++|||++++++
T Consensus       202 -----p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          202 -----PFDEIGGPAFRIMWAVHNGTRPPL--IKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             -----TTTTTCSSHHHHHHHHHTTCCCCC--BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CchhhCccHHHHHHHHhcCCCCCc--ccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                 886532 33444445555544443  3457889999999999999999999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=7.8e-35  Score=272.30  Aligned_cols=233  Identities=19%  Similarity=0.283  Sum_probs=186.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC-CEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-EELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||+++..  ...|++|.+....  ..+.+.+|+.++++++|+||+++++++... +..++++||+++++|.+
T Consensus        29 lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (278)
T 1byg_A           29 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  104 (278)
T ss_dssp             EEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHH
T ss_pred             EecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHH
Confidence            588999999988764  5678999876433  457789999999999999999999986544 47899999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++...   .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+......            
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg--~~~~~~~~------------  170 (278)
T 1byg_A          105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEASST------------  170 (278)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC--C-------------------
T ss_pred             HHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecc--cccccccc------------
Confidence            99754   38999999999999999999999999999999999999999999999999  33211000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (278)
T 1byg_A          171 --------------------------------------------------------------------------------  170 (278)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~  315 (400)
                                                    .....+++.|+|||++.+..+...+|.|++|+++|+|++ |..       
T Consensus       171 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~-------  213 (278)
T 1byg_A          171 ------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV-------  213 (278)
T ss_dssp             -----------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC-------
T ss_pred             ------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC-------
Confidence                                          111246778999999988888889999999999999998 876       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                        ||.. .+..+....+..+..+..  +..+++.+.++|++||+.||++|||+.++++
T Consensus       214 --p~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          214 --PYPR-IPLKDVVPRVEKGYKMDA--PDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             --SCTT-SCGGGHHHHHTTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCCC-CCHHHHHHHHhcCCCCCC--cccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence              7765 444455555555544333  3457889999999999999999999999976

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.8e-34  Score=272.08  Aligned_cols=247  Identities=15%  Similarity=0.168  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||++.+......||+|.+....  ..+.+.+|+.+++.+ +|+|++++++++..+...++++||+ +++|.+
T Consensus        18 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   94 (298)
T 1csn_A           18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLED   94 (298)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHH
Confidence            588999999999887788889999875433  234578999999999 8999999999999999999999999 889999


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc-----eEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS-----VKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++..  ..+++..+..++.|++.||.|||+++++||||||+||+++.++.     ++|+|||  .+..........    
T Consensus        95 ~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg--~~~~~~~~~~~~----  168 (298)
T 1csn_A           95 LLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG--MVKFYRDPVTKQ----  168 (298)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT--TCEESBCTTTCC----
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc--cccccccccccc----
Confidence            9985  36999999999999999999999999999999999999987766     9999999  443221111000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                           .          
T Consensus       169 ---------------------------------------------------------------------~----------  169 (298)
T 1csn_A          169 ---------------------------------------------------------------------H----------  169 (298)
T ss_dssp             ---------------------------------------------------------------------B----------
T ss_pred             ---------------------------------------------------------------------c----------
Confidence                                                                                 0          


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                   ..........||+.|+|||++.+..+...+|.||+|+++|||++|..    
T Consensus       170 -----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~----  216 (298)
T 1csn_A          170 -----------------------------IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL----  216 (298)
T ss_dssp             -----------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             -----------------------------ccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCC----
Confidence                                         00011345579999999999999888899999999999999999987    


Q ss_pred             cccccCcchh--hcHHHHHHHHHhCCC-CCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFI--LSCRQALYLIATNKK-PEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~--~~~~~~~~~i~~~~~-~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           ||...  .........+..... ... .....+++.+.+||.+||+.||++|||++++++
T Consensus       217 -----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          217 -----PWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             -----TTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -----CcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                 88662  233344444433211 111 112357889999999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.4e-35  Score=287.38  Aligned_cols=243  Identities=20%  Similarity=0.247  Sum_probs=194.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC--EEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE--ELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+.... ....+.+.+|+.++++++|+||+++++++....  ..++||||+++++|
T Consensus        17 LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L   96 (396)
T 4eut_A           17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL   96 (396)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEH
T ss_pred             EEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCH
Confidence            689999999999998888899999876433 223567889999999999999999999988654  78999999999999


Q ss_pred             HHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe----cCCCceEEeccchhhhhhhccccchhh
Q psy9736          78 TDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL----GLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        78 ~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+++...    .+++..++.++.|++.||.|||+.+|+||||||+||++    +.++.++|+|||  .+.......    
T Consensus        97 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG--~a~~~~~~~----  170 (396)
T 4eut_A           97 YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG--AARELEDDE----  170 (396)
T ss_dssp             HHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGG--GCEECCCGG----
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCC--CceEccCCC----
Confidence            9999753    39999999999999999999999999999999999999    777889999999  443111100    


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (396)
T 4eut_A          171 --------------------------------------------------------------------------------  170 (396)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec--------CCCCcccCCCCccchhh
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD--------KNKNQTTPPTGLTGSIL  301 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~d~~s~g~~~~  301 (400)
                                                          ......||+.|+|||++.+        ..++..+|+||+|+++|
T Consensus       171 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~  214 (396)
T 4eut_A          171 ------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY  214 (396)
T ss_dssp             ------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHH
Confidence                                                0122368889999998765        33446789999999999


Q ss_pred             hhcCCCCcccccccccCcchh---hcHHHHHHHHHhCCCCCc------------------c----hhhhhcHHHHHHHHH
Q psy9736         302 EFLGPHKWSFQPHFLIPYLFI---LSCRQALYLIATNKKPEI------------------K----EKEKLSQIFQDFLDQ  356 (400)
Q Consensus       302 ~~~~gd~ws~g~~~~~P~~~~---~~~~~~~~~i~~~~~~~~------------------~----~~~~~s~~~~dli~~  356 (400)
                      ||++|..         ||...   ....+.+..+..+.++..                  +    -...++..+.+||++
T Consensus       215 el~tg~~---------Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~  285 (396)
T 4eut_A          215 HAATGSL---------PFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLAN  285 (396)
T ss_dssp             HHHHSSC---------SEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHH
T ss_pred             HHHHCCC---------CCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHH
Confidence            9999987         88642   334666777777654321                  0    113467789999999


Q ss_pred             hhhhhhhhhhcHHHHhcC
Q psy9736         357 CLEEEVETRASASLLLKH  374 (400)
Q Consensus       357 ~L~~dP~~R~s~~~~l~h  374 (400)
                      ||+.||++|||+++++++
T Consensus       286 ~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          286 ILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HSCCCTTTSCCHHHHHHH
T ss_pred             hhccChhhhccHHHHHHH
Confidence            999999999999998543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.8e-34  Score=294.94  Aligned_cols=238  Identities=17%  Similarity=0.252  Sum_probs=196.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|.|+.||++..... .+||+|.+..... ..+.|.+|+.++++++|+||+++++++.. +..++||||+.+++|.++
T Consensus       275 lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~  351 (535)
T 2h8h_A          275 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF  351 (535)
T ss_dssp             EEECSSEEEEEEEETTT-EEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHH
T ss_pred             cccCCCeEEEEEEECCC-ceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHH
Confidence            58999999999977653 4689998875443 45779999999999999999999998865 678999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.||+.||.|||+++|+||||||+||+++.++.++|+|||  ++..........         
T Consensus       352 l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG--~a~~~~~~~~~~---------  420 (535)
T 2h8h_A          352 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG--LARLIEDNEYTA---------  420 (535)
T ss_dssp             HSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTT--STTTCCCHHHHT---------
T ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccc--cceecCCCceec---------
Confidence            974   358999999999999999999999999999999999999999999999999  444221110000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       421 --------------------------------------------------------------------------------  420 (535)
T 2h8h_A          421 --------------------------------------------------------------------------------  420 (535)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~  316 (400)
                                                   .....+++.|+|||++....+...+|+||+|+++|||++ |..        
T Consensus       421 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~--------  463 (535)
T 2h8h_A          421 -----------------------------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV--------  463 (535)
T ss_dssp             -----------------------------TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCC--------
T ss_pred             -----------------------------ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC--------
Confidence                                         112246778999999998888889999999999999999 776        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                       ||.. ....+.+..+..+.....  +..++..+.+||.+||+.||++|||++++++
T Consensus       464 -P~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          464 -PYPG-MVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             -SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence             8776 666677777766644333  3457889999999999999999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1e-34  Score=282.60  Aligned_cols=249  Identities=15%  Similarity=0.157  Sum_probs=183.4

Q ss_pred             CCcceEEEEEecCCCce-----eEEEEeccccccCcch-----------HHHHHHHHHHHHhCCCCCcccccceeEeC--
Q psy9736           1 MKRGVTIDRFSSDDRRF-----FSKILSNPITLAQQPK-----------KELIINEILVMRENKHPNIVNYLDSYLVG--   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-----~~~va~K~~~~~~~~~-----------~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--   62 (400)
                      ||+|+|+.||++.+...     ...||+|.+.......           .+.+..|+..++.++|+||+++++++...  
T Consensus        43 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~  122 (364)
T 3op5_A           43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKN  122 (364)
T ss_dssp             CCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEET
T ss_pred             EecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccC
Confidence            69999999999965432     3567777765433211           12233455566677899999999998764  


Q ss_pred             --CEEEEEEeccCCCChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec--CCCceEEeccchh
Q psy9736          63 --EELWVVMEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG--LDGSVKLSKWNRF  136 (400)
Q Consensus        63 --~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~--~~~~~~l~dfg~~  136 (400)
                        ...++||||+ +++|.+++..  ..+++..++.++.|++.||.|||+.+|+||||||+||+++  .++.++|+|||  
T Consensus       123 ~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG--  199 (364)
T 3op5_A          123 GKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG--  199 (364)
T ss_dssp             TEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCT--
T ss_pred             CcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECC--
Confidence              4689999999 9999999975  4699999999999999999999999999999999999999  88999999999  


Q ss_pred             hhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecc
Q psy9736         137 IATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD  216 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (400)
                      ++..+.......                                                                    
T Consensus       200 ~a~~~~~~~~~~--------------------------------------------------------------------  211 (364)
T 3op5_A          200 LAYRYCPEGVHK--------------------------------------------------------------------  211 (364)
T ss_dssp             TCEESSGGGCCC--------------------------------------------------------------------
T ss_pred             cceecccCCccc--------------------------------------------------------------------
Confidence            444221111000                                                                    


Q ss_pred             cccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCc
Q psy9736         217 SYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGL  296 (400)
Q Consensus       217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~  296 (400)
                                                                  .....+.....||+.|+|||++.+..++..+|+||+
T Consensus       212 --------------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  247 (364)
T 3op5_A          212 --------------------------------------------AYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL  247 (364)
T ss_dssp             --------------------------------------------CSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             --------------------------------------------ccccCcccccCCCCCccCHHHhCCCCCCchhhHHHH
Confidence                                                        000112344579999999999999888899999999


Q ss_pred             cchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcch-------hhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         297 TGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE-------KEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       297 g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                      |+++|||++|..         ||..................+.+..       ..+++..+.+||..||..||++||+++
T Consensus       248 G~~l~el~~g~~---------Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~  318 (364)
T 3op5_A          248 GYCMIQWLTGHL---------PWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYE  318 (364)
T ss_dssp             HHHHHHHHHSCC---------TTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             HHHHHHHHhCCC---------CccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHH
Confidence            999999999987         8876332222222121111111111       134578899999999999999999999


Q ss_pred             HHhc
Q psy9736         370 LLLK  373 (400)
Q Consensus       370 ~~l~  373 (400)
                      ++++
T Consensus       319 ~l~~  322 (364)
T 3op5_A          319 NLRD  322 (364)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.8e-35  Score=280.02  Aligned_cols=247  Identities=15%  Similarity=0.179  Sum_probs=188.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||++... ....||+|.+..... .....+.+|+.+++.++|+||+++++++..+...++||||+++++|.+
T Consensus        38 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  116 (326)
T 3uim_A           38 LGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS  116 (326)
T ss_dssp             EECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHH
T ss_pred             EecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHH
Confidence            589999999999754 356788888764432 122368899999999999999999999999999999999999999999


Q ss_pred             HHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          80 VVTET-----CMDEGQIAAVCREVLQALEFLHSN---QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        80 ~i~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      ++...     .+++..+..++.|++.||.|||+.   +++||||||+||+++.++.++|+|||  .+........     
T Consensus       117 ~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg--~~~~~~~~~~-----  189 (326)
T 3uim_A          117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG--LAKLMDYKDT-----  189 (326)
T ss_dssp             HHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS--SCEECCSSSS-----
T ss_pred             HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc--cccccCcccc-----
Confidence            99753     389999999999999999999999   99999999999999999999999999  4331110000     


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (326)
T 3uim_A          190 --------------------------------------------------------------------------------  189 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       .......||+.|+|||++.+..++..+|+||+|+++|+|++|..   
T Consensus       190 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~---  233 (326)
T 3uim_A          190 ---------------------------------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR---  233 (326)
T ss_dssp             ---------------------------------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCC---
T ss_pred             ---------------------------------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCC---
Confidence                                             00122358999999999988878889999999999999999986   


Q ss_pred             ccccccCcchhh-------cHHHHHHHHHhCCC-CC-------cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcc
Q psy9736         312 QPHFLIPYLFIL-------SCRQALYLIATNKK-PE-------IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF  376 (400)
Q Consensus       312 g~~~~~P~~~~~-------~~~~~~~~i~~~~~-~~-------~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~  376 (400)
                            ||....       .............. ..       .......+..+.+|+.+||+.||++|||+.++++|-.
T Consensus       234 ------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          234 ------AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             ------SBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             ------cccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                  774310       01111111111100 00       0112335678999999999999999999999998765


Q ss_pred             c
Q psy9736         377 L  377 (400)
Q Consensus       377 ~  377 (400)
                      -
T Consensus       308 ~  308 (326)
T 3uim_A          308 G  308 (326)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.2e-34  Score=274.69  Aligned_cols=244  Identities=16%  Similarity=0.207  Sum_probs=191.2

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC--EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE--ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~~~   74 (400)
                      ||+|+++.||++.    +......||+|.+........+.+.+|+.++++++|+||+++++++...+  ..++|+||+++
T Consensus        49 lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~  128 (326)
T 2w1i_A           49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY  128 (326)
T ss_dssp             EECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTT
T ss_pred             eccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCC
Confidence            5899999999887    66778889999987766666778999999999999999999999886543  68999999999


Q ss_pred             CChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++...  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+..........    
T Consensus       129 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg--~~~~~~~~~~~~----  202 (326)
T 2w1i_A          129 GSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG--LTKVLPQDKEYY----  202 (326)
T ss_dssp             CBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT--TCEECCSSCSEE----
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCc--chhhcccccccc----
Confidence            9999999764  58999999999999999999999999999999999999999999999999  433111110000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       203 --------------------------------------------------------------------------------  202 (326)
T 2w1i_A          203 --------------------------------------------------------------------------------  202 (326)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......+++.|+|||++.+..+...+|.||+|+++|+|++|..    
T Consensus       203 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~----  246 (326)
T 2w1i_A          203 --------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE----  246 (326)
T ss_dssp             --------------------------------ECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC----
T ss_pred             --------------------------------ccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC----
Confidence                                            00122356778999999988777788999999999999999965    


Q ss_pred             cccccCcchhhcH---------------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         313 PHFLIPYLFILSC---------------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       313 ~~~~~P~~~~~~~---------------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                           |+......               ......+..+....  .+..++..+.+||++||+.||++|||++++++
T Consensus       247 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          247 -----KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             -----GGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----CCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                 44321110               11122222222222  24457889999999999999999999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.7e-34  Score=269.97  Aligned_cols=248  Identities=19%  Similarity=0.212  Sum_probs=188.2

Q ss_pred             CCcceEEEEEecCC---CceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+++.||++..   ......|++|.+...   .....+.+.+|+.++++++|+||+++++++..+. .++++||+++
T Consensus        26 lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~  104 (291)
T 1u46_A           26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPL  104 (291)
T ss_dssp             CC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTT
T ss_pred             ecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccC
Confidence            68899999988752   233456888887644   2234577899999999999999999999998655 8899999999


Q ss_pred             CChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++|.+++..  ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||  .+..........    
T Consensus       105 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg--~~~~~~~~~~~~----  178 (291)
T 1u46_A          105 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG--LMRALPQNDDHY----  178 (291)
T ss_dssp             CBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT--TCEECCC-CCEE----
T ss_pred             CCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccc--ccccccccccch----
Confidence            999998875  369999999999999999999999999999999999999999999999999  333111110000    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       179 --------------------------------------------------------------------------------  178 (291)
T 1u46_A          179 --------------------------------------------------------------------------------  178 (291)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~  311 (400)
                                                      .......+|+.|+|||++.+..+...+|.|++|+++|+|++ |..   
T Consensus       179 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~---  223 (291)
T 1u46_A          179 --------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE---  223 (291)
T ss_dssp             --------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC---
T ss_pred             --------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC---
Confidence                                            00122356788999999988777788999999999999999 876   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                            ||.. .+..+....+..... ..+.+..++..+.++|.+||+.||++|||+.++++  +|+..
T Consensus       224 ------p~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~--~l~~~  282 (291)
T 1u46_A          224 ------PWIG-LNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD--FLLEA  282 (291)
T ss_dssp             ------TTTT-CCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHH
T ss_pred             ------Cccc-CCHHHHHHHHHccCC-CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH--HHHHh
Confidence                  7766 566666666655432 22334568899999999999999999999999997  44443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=9.4e-35  Score=279.01  Aligned_cols=252  Identities=19%  Similarity=0.252  Sum_probs=179.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHH--HHhCCCCCcccccceeEe-----CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILV--MRENKHPNIVNYLDSYLV-----GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~--l~~l~h~niv~~~~~~~~-----~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||+++.  ....||+|.+....   ...+..|.++  +..++|+||+++++.+..     ...+++||||++
T Consensus        21 lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~   95 (336)
T 3g2f_A           21 IGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP   95 (336)
T ss_dssp             EEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred             cccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence            58999999999855  45778999876433   2334445544  445899999999875542     236789999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---------CeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSN---------QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~---------~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      +++|.+++.....++..+..++.|++.||.|||+.         +|+||||||+||+++.++.++|+|||  ++......
T Consensus        96 ~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG--~a~~~~~~  173 (336)
T 3g2f_A           96 NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG--LSMRLTGN  173 (336)
T ss_dssp             TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT--TCEECSSS
T ss_pred             CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc--ceeecccc
Confidence            99999999988889999999999999999999999         99999999999999999999999999  44322111


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      ....                                                                            
T Consensus       174 ~~~~----------------------------------------------------------------------------  177 (336)
T 3g2f_A          174 RLVR----------------------------------------------------------------------------  177 (336)
T ss_dssp             SCC-----------------------------------------------------------------------------
T ss_pred             cccC----------------------------------------------------------------------------
Confidence            1000                                                                            


Q ss_pred             cccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-------CCCcccCCCCcc
Q psy9736         225 WYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-------NKNQTTPPTGLT  297 (400)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~d~~s~g  297 (400)
                                                         ............||+.|+|||++.+.       .+...+|+||+|
T Consensus       178 -----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  222 (336)
T 3g2f_A          178 -----------------------------------PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG  222 (336)
T ss_dssp             -------------------------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred             -----------------------------------ccccccccccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence                                               00000112344789999999998762       333568999999


Q ss_pred             chhhhhcCCCCcccccccccCcchhhc----------------HHHHHHHHHhC--CCCCcc----hhhhhcHHHHHHHH
Q psy9736         298 GSILEFLGPHKWSFQPHFLIPYLFILS----------------CRQALYLIATN--KKPEIK----EKEKLSQIFQDFLD  355 (400)
Q Consensus       298 ~~~~~~~~gd~ws~g~~~~~P~~~~~~----------------~~~~~~~i~~~--~~~~~~----~~~~~s~~~~dli~  355 (400)
                      +++|||++|..         ||.....                ...........  ..+.++    .....++.+.+||.
T Consensus       223 ~il~ell~g~~---------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  293 (336)
T 3g2f_A          223 LIYWEIFMRCT---------DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE  293 (336)
T ss_dssp             HHHHHHHTTBG---------GGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC---------cCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHH
Confidence            99999999954         4332111                11122222211  122222    12335668999999


Q ss_pred             HhhhhhhhhhhcHHHH------hcCccccc
Q psy9736         356 QCLEEEVETRASASLL------LKHPFLKI  379 (400)
Q Consensus       356 ~~L~~dP~~R~s~~~~------l~hp~~~~  379 (400)
                      +||+.||++|||++|+      +.++|-++
T Consensus       294 ~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          294 DCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             HHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             HHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            9999999999999999      55788885

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=276.10  Aligned_cols=252  Identities=17%  Similarity=0.219  Sum_probs=175.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeE--------eCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYL--------VGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~--------~~~~~~lv~e~   71 (400)
                      ||+|+|+.||++.+......||+|.+........+.+.+|+.+++++. |+||+++++++.        ....+++++||
T Consensus        36 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~  115 (337)
T 3ll6_A           36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL  115 (337)
T ss_dssp             EECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEEC
T ss_pred             EccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEe
Confidence            589999999999988888889999886665556678899999999995 999999999884        33468999999


Q ss_pred             cCCCChHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEecCCCceEEeccchhhhhhhcccc
Q psy9736          72 LPGGSLTDVVTE----TCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI  145 (400)
Q Consensus        72 ~~~~~L~~~i~~----~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~  145 (400)
                      +. ++|.+++..    +.+++..++.++.|++.||.|||+.+  ++|+||||+||+++.++.++|+|||  .+.......
T Consensus       116 ~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg--~~~~~~~~~  192 (337)
T 3ll6_A          116 CK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG--SATTISHYP  192 (337)
T ss_dssp             CS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT--TCBCCSSCC
T ss_pred             cC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc--cceeccccC
Confidence            95 689888764    46999999999999999999999999  9999999999999999999999999  443221111


Q ss_pred             chhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         146 SKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ...               +..                                      .                    
T Consensus       193 ~~~---------------~~~--------------------------------------~--------------------  199 (337)
T 3ll6_A          193 DYS---------------WSA--------------------------------------Q--------------------  199 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccc---------------ccc--------------------------------------c--------------------
Confidence            100               000                                      0                    


Q ss_pred             ccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce---ecCCCCcccCCCCccchhhh
Q psy9736         226 YTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV---LDKNKNQTTPPTGLTGSILE  302 (400)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~d~~s~g~~~~~  302 (400)
                                                        ............||+.|+|||++   .+..+...+|+|++|+++|+
T Consensus       200 ----------------------------------~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~e  245 (337)
T 3ll6_A          200 ----------------------------------RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYL  245 (337)
T ss_dssp             ----------------------------------------------------------CCTTSCSSHHHHHHHHHHHHHH
T ss_pred             ----------------------------------ccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHH
Confidence                                              00000112345789999999998   45556678999999999999


Q ss_pred             hcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         303 FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       303 ~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      |++|..         ||.. ........    .. ...+.....+..+.+||++||+.||++|||++++++|-+-
T Consensus       246 l~~g~~---------p~~~-~~~~~~~~----~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  305 (337)
T 3ll6_A          246 LCFRQH---------PFED-GAKLRIVN----GK-YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE  305 (337)
T ss_dssp             HHHSSC---------CC------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HHhCCC---------CCcc-hhHHHhhc----Cc-ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            999987         8765 22222221    11 1112233456678999999999999999999999998543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=6.8e-35  Score=301.55  Aligned_cols=248  Identities=20%  Similarity=0.195  Sum_probs=194.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEe------CCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLV------GEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~------~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+...+..||+|.+.... ....+.+.+|+.++++++|+||+++++++..      ++..++||||++
T Consensus        22 LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~  101 (676)
T 3qa8_A           22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE  101 (676)
T ss_dssp             CCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCS
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCC
Confidence            699999999999998888999999886542 3345778999999999999999999988755      567899999999


Q ss_pred             CCChHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCc---eEEeccchhhhhhhccccc
Q psy9736          74 GGSLTDVVTET----CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS---VKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        74 ~~~L~~~i~~~----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~---~~l~dfg~~~~~~~~~~~~  146 (400)
                      +++|.+++...    .+++..++.++.|++.||.|||+.|++||||||+||+++.++.   ++|+|||  .+.....   
T Consensus       102 ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG--~a~~~~~---  176 (676)
T 3qa8_A          102 GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG--YAKELDQ---  176 (676)
T ss_dssp             SCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC--CCCBTTS---
T ss_pred             CCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc--ccccccc---
Confidence            99999999753    5899999999999999999999999999999999999997765   8999999  3331100   


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                       .                                                                              
T Consensus       177 -~------------------------------------------------------------------------------  177 (676)
T 3qa8_A          177 -G------------------------------------------------------------------------------  177 (676)
T ss_dssp             -C------------------------------------------------------------------------------
T ss_pred             -c------------------------------------------------------------------------------
Confidence             0                                                                              


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                            .......||+.|+|||++.+..++..+|.|++|+++|+|++|
T Consensus       178 --------------------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG  219 (676)
T 3qa8_A          178 --------------------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG  219 (676)
T ss_dssp             --------------------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSS
T ss_pred             --------------------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHC
Confidence                                                  012234789999999999998888999999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHH--------HH-----HhCC-------CCCcchhhhhcHHHHHHHHHhhhhhhhhhh
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALY--------LI-----ATNK-------KPEIKEKEKLSQIFQDFLDQCLEEEVETRA  366 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~--------~i-----~~~~-------~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  366 (400)
                      ..         ||.....+.....        .+     ..+.       +..-.-...+++.+.+||++||..||++||
T Consensus       220 ~~---------Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRP  290 (676)
T 3qa8_A          220 FR---------PFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRG  290 (676)
T ss_dssp             CS---------SCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---
T ss_pred             CC---------CCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCc
Confidence            76         7765322221100        00     0000       000011234678999999999999999999


Q ss_pred             cHHHHhcCccccc
Q psy9736         367 SASLLLKHPFLKI  379 (400)
Q Consensus       367 s~~~~l~hp~~~~  379 (400)
                      |++++++||||+.
T Consensus       291 Ta~elL~hp~F~~  303 (676)
T 3qa8_A          291 TDPQNPNVGCFQA  303 (676)
T ss_dssp             CCTTCCCCTTHHH
T ss_pred             CHHHHhcCHHHHH
Confidence            9999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5e-34  Score=276.31  Aligned_cols=244  Identities=18%  Similarity=0.205  Sum_probs=187.5

Q ss_pred             CCcceEEEEEecCCCc--------eeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccc---------------ccc
Q psy9736           1 MKRGVTIDRFSSDDRR--------FFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVN---------------YLD   57 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~--------~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~---------------~~~   57 (400)
                      ||+|+++.||++.+..        ....||+|.+...     +.+.+|+.++++++|+||++               +++
T Consensus        50 lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~  124 (352)
T 2jii_A           50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMG  124 (352)
T ss_dssp             EEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCE
T ss_pred             ecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhh
Confidence            5889999999998776        3678888887543     34789999999999999988               455


Q ss_pred             eeEe-CCEEEEEEeccCCCChHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC--ceEEe
Q psy9736          58 SYLV-GEELWVVMEYLPGGSLTDVVTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG--SVKLS  131 (400)
Q Consensus        58 ~~~~-~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~--~~~l~  131 (400)
                      ++.. +...++||||+ +++|.+++..   ..+++..+..++.|++.||.|||+++++||||||+||+++.++  .++|+
T Consensus       125 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~  203 (352)
T 2jii_A          125 FGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLA  203 (352)
T ss_dssp             EEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEEC
T ss_pred             ccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEe
Confidence            6655 67899999999 9999999975   4799999999999999999999999999999999999999998  89999


Q ss_pred             ccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcccccccee
Q psy9736         132 KWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI  211 (400)
Q Consensus       132 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (400)
                      |||  .+..........                                                               
T Consensus       204 Dfg--~a~~~~~~~~~~---------------------------------------------------------------  218 (352)
T 2jii_A          204 GYG--FAFRYCPSGKHV---------------------------------------------------------------  218 (352)
T ss_dssp             CGG--GCBCSSGGGCCC---------------------------------------------------------------
T ss_pred             cCc--ceeeccCCCccc---------------------------------------------------------------
Confidence            999  444221111000                                                               


Q ss_pred             eeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCccc
Q psy9736         212 VNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTT  291 (400)
Q Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  291 (400)
                                                                       ...........||+.|+|||++.+..+...+
T Consensus       219 -------------------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  249 (352)
T 2jii_A          219 -------------------------------------------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRS  249 (352)
T ss_dssp             -------------------------------------------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHH
T ss_pred             -------------------------------------------------cccccccccccCCccccCHHHHccCCCCchh
Confidence                                                             0000113345799999999999998888899


Q ss_pred             CCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHH---hCCCCCcch----hhhhcHHHHHHHHHhhhhhhhh
Q psy9736         292 PPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIA---TNKKPEIKE----KEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       292 d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~---~~~~~~~~~----~~~~s~~~~dli~~~L~~dP~~  364 (400)
                      |.||+|+++|||++|..         ||..............   ....+.+..    +..++..+.+||.+||+.||++
T Consensus       250 Di~slG~il~el~~g~~---------pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  320 (352)
T 2jii_A          250 DLQSLGYCMLKWLYGFL---------PWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE  320 (352)
T ss_dssp             HHHHHHHHHHHHHHSCC---------TTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC
T ss_pred             hHHHHHHHHHHHHhCCC---------CcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh
Confidence            99999999999999987         8877432222222221   222222221    1246889999999999999999


Q ss_pred             hhcHHHHhc
Q psy9736         365 RASASLLLK  373 (400)
Q Consensus       365 R~s~~~~l~  373 (400)
                      |||++++++
T Consensus       321 Rps~~~l~~  329 (352)
T 2jii_A          321 KPPYAMLRN  329 (352)
T ss_dssp             CCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=7.9e-34  Score=269.14  Aligned_cols=243  Identities=21%  Similarity=0.216  Sum_probs=184.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc----CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA----QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+++.||++...  ...|++|.+...    .....+.+.+|+.++++++|+||+++++++..++..+++|||+++++
T Consensus        39 lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  116 (307)
T 2nru_A           39 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS  116 (307)
T ss_dssp             EEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             cccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCc
Confidence            588999999998653  346677765432    23346779999999999999999999999998889999999999999


Q ss_pred             hHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          77 LTDVVTE----TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        77 L~~~i~~----~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      |.+++..    ..+++..++.++.|++.||.|||+.+++|+||||+||+++.++.++|+|||  .+.........     
T Consensus       117 L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg--~~~~~~~~~~~-----  189 (307)
T 2nru_A          117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFG--LARASEKFAQT-----  189 (307)
T ss_dssp             HHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT--TCEECCSCSSC-----
T ss_pred             HHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecc--ccccccccccc-----
Confidence            9998863    358999999999999999999999999999999999999999999999999  33311100000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       190 --------------------------------------------------------------------------------  189 (307)
T 2nru_A          190 --------------------------------------------------------------------------------  189 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .......||+.|+|||++.+. +...+|.|++|+++|+|++|..    
T Consensus       190 --------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~----  232 (307)
T 2nru_A          190 --------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLP----  232 (307)
T ss_dssp             --------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCC----
T ss_pred             --------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCC----
Confidence                                            001223688999999988763 5578999999999999999976    


Q ss_pred             cccccCcchhhcH---HHHHHHHHhCCC-------CC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSC---RQALYLIATNKK-------PE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~---~~~~~~i~~~~~-------~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||......   ......+.....       .. ...+...+..+.+++.+||+.||++|||+++++++
T Consensus       233 -----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          233 -----AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             -----SBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             -----CcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                 66542211   111111111110       00 01123456789999999999999999999999863

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.6e-33  Score=294.12  Aligned_cols=240  Identities=17%  Similarity=0.228  Sum_probs=193.8

Q ss_pred             CCcceEEEEEecCC---CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDD---RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~---~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++..   ......|++|...... ....+.+.+|+.++++++|+||+++++++. ++..++||||+++++
T Consensus       398 LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~  476 (656)
T 2j0j_A          398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGE  476 (656)
T ss_dssp             EECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCB
T ss_pred             EeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCc
Confidence            58899999988754   3345778999876543 234577899999999999999999999885 566899999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++.........       
T Consensus       477 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG--~a~~~~~~~~~-------  547 (656)
T 2j0j_A          477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDSTYY-------  547 (656)
T ss_dssp             HHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCC--CCCSCCC-----------
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecC--CCeecCCCcce-------
Confidence            99999754  58999999999999999999999999999999999999999999999999  44311110000       


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       548 --------------------------------------------------------------------------------  547 (656)
T 2j0j_A          548 --------------------------------------------------------------------------------  547 (656)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                     ......||+.|+|||++....+...+|+||+|+++|||++ |..     
T Consensus       548 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~-----  591 (656)
T 2j0j_A          548 -------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-----  591 (656)
T ss_dssp             -------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred             -------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCC-----
Confidence                                           0112356788999999998888889999999999999997 765     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          ||.. .+..+....+..+....+  +.++++.+.+||.+||+.||++|||+.++++
T Consensus       592 ----Pf~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          592 ----PFQG-VKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             ----TTTT-CCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCC--CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                7766 666677777777655444  3457889999999999999999999999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.2e-33  Score=266.21  Aligned_cols=247  Identities=17%  Similarity=0.180  Sum_probs=188.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccccccee-EeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSY-LVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|.++.||++.+......||+|.+.....  .+.+.+|+.+++.++|++++..+..+ ..+...+++|||+ +++|.+
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (296)
T 3uzp_A           17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             EEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHH
Confidence            5889999999999888888999998765443  24588999999999988877666554 5667889999999 889999


Q ss_pred             HHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++.  ...+++..+..++.|++.||.|||+++++||||||+||++   +.++.++|+|||  .+..........      
T Consensus        94 ~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg--~~~~~~~~~~~~------  165 (296)
T 3uzp_A           94 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG--LAKKYRDARTHQ------  165 (296)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCT--TCEECBCTTTCC------
T ss_pred             HHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCC--Cccccccccccc------
Confidence            997  3479999999999999999999999999999999999999   478999999999  443211111000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                         .            
T Consensus       166 -------------------------------------------------------------------~------------  166 (296)
T 3uzp_A          166 -------------------------------------------------------------------H------------  166 (296)
T ss_dssp             -------------------------------------------------------------------B------------
T ss_pred             -------------------------------------------------------------------c------------
Confidence                                                                               0            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                 ..........||+.|+|||++.+..+...+|+||+|+++|+|++|..      
T Consensus       167 ---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~------  213 (296)
T 3uzp_A          167 ---------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL------  213 (296)
T ss_dssp             ---------------------------CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ---------------------------cccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCC------
Confidence                                       00011344579999999999999888889999999999999999987      


Q ss_pred             cccCcchhh--cHHHHHHHHHhCCC--CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFIL--SCRQALYLIATNKK--PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~--~~~~~~~~i~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||....  ........+.....  +.......+++.+.+||.+||+.||++|||++++++
T Consensus       214 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          214 ---PWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ---TTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ---CCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence               886521  11122222222110  100112447889999999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.2e-33  Score=271.79  Aligned_cols=252  Identities=16%  Similarity=0.261  Sum_probs=187.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh--CCCCCcccccceeEeCC----EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVGE----ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e~~~~   74 (400)
                      ||+|+++.||++...  ...||+|.+...   ..+.+.+|+++++.  ++|+||+++++++....    ..+++|||+++
T Consensus        50 lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~  124 (342)
T 1b6c_B           50 IGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH  124 (342)
T ss_dssp             EEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTT
T ss_pred             ecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCC
Confidence            588999999998763  577899987533   34667889999988  69999999999998765    79999999999


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHH--------hCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLH--------SNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH--------~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      ++|.+++....+++..+..++.|++.||.|||        +.+++||||||+||+++.++.++|+|||  .+........
T Consensus       125 g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg--~~~~~~~~~~  202 (342)
T 1b6c_B          125 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG--LAVRHDSATD  202 (342)
T ss_dssp             CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT--TCEEEETTTT
T ss_pred             CcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC--Cceecccccc
Confidence            99999999888999999999999999999999        8899999999999999999999999999  4431111100


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ..                                                                              
T Consensus       203 ~~------------------------------------------------------------------------------  204 (342)
T 1b6c_B          203 TI------------------------------------------------------------------------------  204 (342)
T ss_dssp             EE------------------------------------------------------------------------------
T ss_pred             cc------------------------------------------------------------------------------
Confidence            00                                                                              


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC------cccCCCCccchh
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN------QTTPPTGLTGSI  300 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~------~~~d~~s~g~~~  300 (400)
                                                           ........||+.|+|||++.+....      ..+|+||+|+++
T Consensus       205 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il  247 (342)
T 1b6c_B          205 -------------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF  247 (342)
T ss_dssp             -------------------------------------EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             -------------------------------------ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHH
Confidence                                                 0002234688899999988765322      468999999999


Q ss_pred             hhhcCCCCc-ccccccccCcchhh----cHHHHHHHHHhC-CCCCcch---hhhhcHHHHHHHHHhhhhhhhhhhcHHHH
Q psy9736         301 LEFLGPHKW-SFQPHFLIPYLFIL----SCRQALYLIATN-KKPEIKE---KEKLSQIFQDFLDQCLEEEVETRASASLL  371 (400)
Q Consensus       301 ~~~~~gd~w-s~g~~~~~P~~~~~----~~~~~~~~i~~~-~~~~~~~---~~~~s~~~~dli~~~L~~dP~~R~s~~~~  371 (400)
                      |||++|... ........||....    ........+... ..+.++.   ....+..+.+||.+||+.||++|||++++
T Consensus       248 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  327 (342)
T 1b6c_B          248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI  327 (342)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence            999998210 00000023776532    122223333222 2233332   12355689999999999999999999999


Q ss_pred             hcC
Q psy9736         372 LKH  374 (400)
Q Consensus       372 l~h  374 (400)
                      ++|
T Consensus       328 ~~~  330 (342)
T 1b6c_B          328 KKT  330 (342)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.3e-34  Score=270.84  Aligned_cols=247  Identities=17%  Similarity=0.180  Sum_probs=187.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccccccee-EeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSY-LVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+++.||.+.+......||+|.+.....  .+.+.+|+.+++.++|++++..+..+ ..+...+++|||+ +++|.+
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (296)
T 4hgt_A           17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             ecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHH
Confidence            5899999999999888888999997654432  23478999999999888777766554 6677899999999 889999


Q ss_pred             HHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++.  ...+++..+..++.|++.||.|||+++++||||||+||++   +.++.++|+|||  .+..........      
T Consensus        94 ~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg--~a~~~~~~~~~~------  165 (296)
T 4hgt_A           94 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG--LAKKYRDARTHQ------  165 (296)
T ss_dssp             HHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCT--TCEECBCTTTCC------
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCc--cceeccCcccCc------
Confidence            997  3479999999999999999999999999999999999999   788999999999  443221111000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                         .            
T Consensus       166 -------------------------------------------------------------------~------------  166 (296)
T 4hgt_A          166 -------------------------------------------------------------------H------------  166 (296)
T ss_dssp             -------------------------------------------------------------------B------------
T ss_pred             -------------------------------------------------------------------c------------
Confidence                                                                               0            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                 ..........||+.|+|||++.+..++..+|.||+|+++|+|++|..      
T Consensus       167 ---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~------  213 (296)
T 4hgt_A          167 ---------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL------  213 (296)
T ss_dssp             ---------------------------CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ---------------------------CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCC------
Confidence                                       00011334578999999999999888889999999999999999987      


Q ss_pred             cccCcchhh--cHHHHHHHHHhCCC--CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFIL--SCRQALYLIATNKK--PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~--~~~~~~~~i~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||....  ........+.....  +.-.....+++.+.+||.+||+.||++|||++++++
T Consensus       214 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          214 ---PWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ---TTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ---CCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence               886521  11122222221111  110111346889999999999999999999999876

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=7.7e-34  Score=276.36  Aligned_cols=240  Identities=14%  Similarity=0.126  Sum_probs=185.4

Q ss_pred             CCcceEEEEEec-----CCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC---CCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSS-----DDRRFFSKILSNPITLAQQPKKELIINEILVMRENK---HPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~-----~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++     .+......||+|.+...   ....+.+|+.+++.++   |+||+++++++..++..++||||+
T Consensus        73 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~  149 (365)
T 3e7e_A           73 LGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY  149 (365)
T ss_dssp             EEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCC
T ss_pred             eeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEecc
Confidence            589999999999     56777788999988643   3456788999999886   899999999999999999999999


Q ss_pred             CCCChHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-----------CCceEEeccch
Q psy9736          73 PGGSLTDVVTE------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-----------DGSVKLSKWNR  135 (400)
Q Consensus        73 ~~~~L~~~i~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-----------~~~~~l~dfg~  135 (400)
                      ++++|.+++..      ..+++..++.++.|++.||.|||+++|+||||||+||+++.           ++.++|+||| 
T Consensus       150 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG-  228 (365)
T 3e7e_A          150 SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG-  228 (365)
T ss_dssp             CSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCT-
T ss_pred             CCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCc-
Confidence            99999999963      36999999999999999999999999999999999999998           8999999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       ++..........                                                                   
T Consensus       229 -~a~~~~~~~~~~-------------------------------------------------------------------  240 (365)
T 3e7e_A          229 -QSIDMKLFPKGT-------------------------------------------------------------------  240 (365)
T ss_dssp             -TCEEGGGSCTTE-------------------------------------------------------------------
T ss_pred             -hhhhhhccCCCc-------------------------------------------------------------------
Confidence             443111100000                                                                   


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                        .....+||+.|+|||++.+..++..+|.||
T Consensus       241 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  270 (365)
T 3e7e_A          241 --------------------------------------------------IFTAKCETSGFQCVEMLSNKPWNYQIDYFG  270 (365)
T ss_dssp             --------------------------------------------------EECCSSCTTSCCCHHHHTTCCBSTHHHHHH
T ss_pred             --------------------------------------------------eeeeecCCCCCCChHHhcCCCCCccccHHH
Confidence                                                              023347999999999999988889999999


Q ss_pred             ccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC-
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH-  374 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h-  374 (400)
                      +|+++|||++|..         ||.........    ...   .++ ....++.+.+++..||..+|.+|++..+.+.+ 
T Consensus       271 lG~il~elltg~~---------pf~~~~~~~~~----~~~---~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          271 VAATVYCMLFGTY---------MKVKNEGGECK----PEG---LFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             HHHHHHHHHHSSC---------CCEEEETTEEE----ECS---CCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHhCCC---------ccccCCCCcee----ech---hcc-ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            9999999999987         77653221000    000   000 11135578899999999999999766555554 


Q ss_pred             --ccccc
Q psy9736         375 --PFLKI  379 (400)
Q Consensus       375 --p~~~~  379 (400)
                        .|+..
T Consensus       334 l~~~l~~  340 (365)
T 3e7e_A          334 LKKVFQQ  340 (365)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence              45544

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=6.5e-33  Score=262.38  Aligned_cols=129  Identities=24%  Similarity=0.390  Sum_probs=115.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHH-HhCCCCCcccccceeEe----CCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVM-RENKHPNIVNYLDSYLV----GEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~~   75 (400)
                      ||+|+++.||.+.+......||+|.+..     ...+.+|+.++ +.++|+||+++++++..    +...++||||++++
T Consensus        26 lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~  100 (299)
T 3m2w_A           26 LGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  100 (299)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSC
T ss_pred             cccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCC
Confidence            5899999999998888888999998742     24567899988 55699999999999987    67899999999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccc
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWN  134 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg  134 (400)
                      +|.+++...   .+++..++.++.|++.||.|||+.+++||||||+||+++.   ++.++|+|||
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A          101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             BHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence            999999754   5999999999999999999999999999999999999998   7889999999

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.98  E-value=1.8e-34  Score=285.79  Aligned_cols=237  Identities=13%  Similarity=0.062  Sum_probs=177.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCC-CCcccccce------------------
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKH-PNIVNYLDS------------------   58 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h-~niv~~~~~------------------   58 (400)
                      ||+|+|+.||++.+...+..||+|.+......   ..+.+.+|+.+++.++| .|.......                  
T Consensus        86 LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (413)
T 3dzo_A           86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKM  165 (413)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC----
T ss_pred             cccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCcc
Confidence            68999999999998888889999988744332   24778999999999977 332221111                  


Q ss_pred             ---eEe-----CCEEEEEEeccCCCChHHHHh--------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe
Q psy9736          59 ---YLV-----GEELWVVMEYLPGGSLTDVVT--------ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL  122 (400)
Q Consensus        59 ---~~~-----~~~~~lv~e~~~~~~L~~~i~--------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~  122 (400)
                         +..     ...++++++++ +++|.++++        ...+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl  244 (413)
T 3dzo_A          166 IRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL  244 (413)
T ss_dssp             -----------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             ccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEE
Confidence               111     12467778877 679998885        2247788899999999999999999999999999999999


Q ss_pred             cCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhh
Q psy9736         123 GLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSY  202 (400)
Q Consensus       123 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (400)
                      +.++.++|+|||  ++......                                                          
T Consensus       245 ~~~~~~kL~DFG--~a~~~~~~----------------------------------------------------------  264 (413)
T 3dzo_A          245 DQRGGVFLTGFE--HLVRDGAS----------------------------------------------------------  264 (413)
T ss_dssp             CTTCCEEECCGG--GCEETTEE----------------------------------------------------------
T ss_pred             ecCCeEEEEecc--ceeecCCc----------------------------------------------------------
Confidence            999999999999  43311111                                                          


Q ss_pred             ccccccceeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcce
Q psy9736         203 LVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVV  282 (400)
Q Consensus       203 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  282 (400)
                                                                                      ....+| +.|+|||++
T Consensus       265 ----------------------------------------------------------------~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          265 ----------------------------------------------------------------AVSPIG-RGFAPPETT  279 (413)
T ss_dssp             ----------------------------------------------------------------ECCCCC-TTTCCHHHH
T ss_pred             ----------------------------------------------------------------cccCCC-CceeCchhh
Confidence                                                                            112256 788888888


Q ss_pred             ----------ecCCCCcccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHH
Q psy9736         283 ----------LDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQD  352 (400)
Q Consensus       283 ----------~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~d  352 (400)
                                ....++..+|+||+|+++|||++|..         ||... +.......+..       ....+++.+.+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~---------Pf~~~-~~~~~~~~~~~-------~~~~~~~~~~~  342 (413)
T 3dzo_A          280 AERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL---------PNTDD-AALGGSEWIFR-------SCKNIPQPVRA  342 (413)
T ss_dssp             HHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC---------CCCTT-GGGSCSGGGGS-------SCCCCCHHHHH
T ss_pred             hccccccccccCcCCCchhhHHHHHHHHHHHHHCCC---------CCCCc-chhhhHHHHHh-------hcccCCHHHHH
Confidence                      44445578999999999999999987         88762 22222222222       12246788999


Q ss_pred             HHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         353 FLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       353 li~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      ||.+||+.||++|||+.++++||||+..
T Consensus       343 li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          343 LLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            9999999999999999999999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.98  E-value=8.8e-34  Score=270.11  Aligned_cols=242  Identities=17%  Similarity=0.317  Sum_probs=188.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+++.||++....   .+++|.+....  ....+.+.+|+.++++++|+||+++++++......++++||+++++|.
T Consensus        41 lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~  117 (319)
T 2y4i_B           41 IGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLY  117 (319)
T ss_dssp             CCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHH
T ss_pred             eccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHH
Confidence            6899999999887654   36666665432  223355778999999999999999999999999999999999999999


Q ss_pred             HHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++...  .+++..+..++.|++.||.|||+.+++|+||||+||+++ ++.++|+|||  .+..........        
T Consensus       118 ~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg--~~~~~~~~~~~~--------  186 (319)
T 2y4i_B          118 SVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFG--LFSISGVLQAGR--------  186 (319)
T ss_dssp             HHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCS--CCC-----------------
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecC--Cccccccccccc--------
Confidence            999864  589999999999999999999999999999999999998 7899999999  333111000000        


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (319)
T 2y4i_B          187 --------------------------------------------------------------------------------  186 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---------CCCCcccCCCCccchhhhhcCCC
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---------KNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                .........||+.|+|||++..         ..+...+|+||+|+++|||++|.
T Consensus       187 --------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~  240 (319)
T 2y4i_B          187 --------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE  240 (319)
T ss_dssp             ---------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------------cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence                                      0001223357788888888764         33457899999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      .         ||.. .+.......+..+..+.... ..++..+.+||.+||..||++|||++++++
T Consensus       241 ~---------p~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          241 W---------PFKT-QPAEAIIWQMGTGMKPNLSQ-IGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             C---------SSSS-CCHHHHHHHHHTTCCCCCCC-SSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             C---------CCCC-CCHHHHHHHhccCCCCCCCc-CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            7         8876 56666666776665554432 246778999999999999999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=1.7e-32  Score=276.43  Aligned_cols=247  Identities=17%  Similarity=0.213  Sum_probs=190.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC-CCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+......||+|.+.....  .+++.+|+.+++.++| .++..+..++......++||||+ +++|.+
T Consensus        15 LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~   91 (483)
T 3sv0_A           15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLED   91 (483)
T ss_dssp             CEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHH
Confidence            6899999999999887888899997654432  2347899999999977 45555566667778999999999 889999


Q ss_pred             HHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEe---cCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL---GLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++.  ...+++..++.++.||+.||.|||+++|+||||||+||++   +.++.++|+|||  ++..........      
T Consensus        92 ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFG--la~~~~~~~~~~------  163 (483)
T 3sv0_A           92 LFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFG--LAKKYRDTSTHQ------  163 (483)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCT--TCEECBCTTTCC------
T ss_pred             HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCC--cceeccCCcccc------
Confidence            997  3479999999999999999999999999999999999999   588999999999  444221111100      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                         ..           
T Consensus       164 -------------------------------------------------------------------~~-----------  165 (483)
T 3sv0_A          164 -------------------------------------------------------------------HI-----------  165 (483)
T ss_dssp             -------------------------------------------------------------------BC-----------
T ss_pred             -------------------------------------------------------------------cc-----------
Confidence                                                                               00           


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                  .........||+.|+|||++.+..+...+|+|++|+++|||++|..      
T Consensus       166 ----------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~------  211 (483)
T 3sv0_A          166 ----------------------------PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSL------  211 (483)
T ss_dssp             ----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ----------------------------ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCC------
Confidence                                        0011234579999999999999888889999999999999999987      


Q ss_pred             cccCcchhh--cHHHHHHHHHhCCCC-Cc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         315 FLIPYLFIL--SCRQALYLIATNKKP-EI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       315 ~~~P~~~~~--~~~~~~~~i~~~~~~-~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                         ||....  .....+..+...... .+ .....++..+.+||..||+.||++||+++++++
T Consensus       212 ---Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          212 ---PWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             ---TTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ---CCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence               886622  233333333322111 11 112457889999999999999999999998754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=2e-32  Score=287.58  Aligned_cols=231  Identities=18%  Similarity=0.188  Sum_probs=181.8

Q ss_pred             CCcceEEEEEecCCCc-eeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCE-----EEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRR-FFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEE-----LWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~-~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~-----~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+.. ....|++|.+..... ...+.+.+|+.++++++|+||+++++++...+.     .|+||||++
T Consensus        88 lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~  167 (681)
T 2pzi_A           88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVG  167 (681)
T ss_dssp             EEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCC
T ss_pred             EeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCC
Confidence            5899999999998765 467899998764432 345678899999999999999999999987654     799999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +++|.+.+.. .+++..++.++.||+.||.|||+++|+||||||+||+++.+ .++|+|||  ++....           
T Consensus       168 g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG--~a~~~~-----------  232 (681)
T 2pzi_A          168 GQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG--AVSRIN-----------  232 (681)
T ss_dssp             CEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCT--TCEETT-----------
T ss_pred             CCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecc--cchhcc-----------
Confidence            9999987765 79999999999999999999999999999999999999875 89999999  332110           


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       233 --------------------------------------------------------------------------------  232 (681)
T 2pzi_A          233 --------------------------------------------------------------------------------  232 (681)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                      ......||+.|+|||++.+.. ...+|+||+|+++|+|++|-.     
T Consensus       233 --------------------------------~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~-----  274 (681)
T 2pzi_A          233 --------------------------------SFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLP-----  274 (681)
T ss_dssp             --------------------------------CCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCC-----
T ss_pred             --------------------------------cCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCC-----
Confidence                                            012336899999999987754 578999999999999999853     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                          ||.....         .. .+........++.+.+||.+||+.||++||+..+++.|+|+.
T Consensus       275 ----~~~~~~~---------~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          275 ----TRNGRYV---------DG-LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ----EETTEEC---------SS-CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----CCccccc---------cc-ccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                4433110         01 111112234567899999999999999999999999998875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=2.3e-31  Score=250.58  Aligned_cols=133  Identities=15%  Similarity=0.124  Sum_probs=119.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcc---hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+......||+|.+......   ..+.+.+|+.++++++|+||+++++++..++..|+||||++|++|
T Consensus        39 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L  118 (286)
T 3uqc_A           39 HGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSL  118 (286)
T ss_dssp             EEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEH
T ss_pred             EcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCH
Confidence            58999999999999888899999998755332   247789999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .++++.+. ....+..++.|++.||.|||++||+||||||+||+++.+|.++|++++
T Consensus       119 ~~~l~~~~-~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~  174 (286)
T 3uqc_A          119 QEVADTSP-SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA  174 (286)
T ss_dssp             HHHHTTCC-CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred             HHHHhcCC-ChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc
Confidence            99997654 556788999999999999999999999999999999999999998766

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=2.8e-28  Score=250.37  Aligned_cols=102  Identities=22%  Similarity=0.310  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCe
Q psy9736          33 KKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQV  110 (400)
Q Consensus        33 ~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i  110 (400)
                      ..++|.+|+++|+++ .|+||+++++++++++..||||||++|++|.+++.++ ++++.   .|+.||+.||.|+|++||
T Consensus       284 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GI  360 (569)
T 4azs_A          284 NKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGF  360 (569)
T ss_dssp             HHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCc
Confidence            346799999999999 7999999999999999999999999999999999865 57654   578999999999999999


Q ss_pred             ecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736         111 IHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus       111 vH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |||||||+|||++.+|.+||+|||  +++
T Consensus       361 IHRDIKPeNILL~~dg~vKL~DFG--lAr  387 (569)
T 4azs_A          361 WHDDVRPWNVMVDARQHARLIDFG--SIV  387 (569)
T ss_dssp             EESCCCGGGEEECTTSCEEECCCT--TEE
T ss_pred             eeccCchHhEEECCCCCEEEeecc--cCe
Confidence            999999999999999999999999  554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.83  E-value=2e-21  Score=198.21  Aligned_cols=159  Identities=15%  Similarity=0.105  Sum_probs=117.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--------cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--------QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||+++.  .+..+++|......        ....+++.+|+.++++++|+||+++..++......|+||||+
T Consensus       344 LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~  421 (540)
T 3en9_A          344 IGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI  421 (540)
T ss_dssp             ----CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred             EeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence            68999999998832  23344444432211        112456899999999999999996666666777789999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++++|.+++..       +..++.|++.||.|||+++|+||||||+||+++.  .++|+|||  ++..............
T Consensus       422 ~ggsL~~~l~~-------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFG--la~~~~~~~~~~~~~~  490 (540)
T 3en9_A          422 NGKLAKDVIED-------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFG--LGKISNLDEDKAVDLI  490 (540)
T ss_dssp             CSEEHHHHSTT-------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCT--TCEECCCHHHHHHHHH
T ss_pred             CCCCHHHHHHH-------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECc--cCEECCCccccccchh
Confidence            99999999876       6689999999999999999999999999999998  99999999  6654433222211111


Q ss_pred             cccccccccceeeehhhccC
Q psy9736         153 WDWTAVASGTVYTAIESSTG  172 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~  172 (400)
                      .......+|..|+|||.+.+
T Consensus       491 ~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          491 VFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             HHHHHHHHHCGGGHHHHHHH
T ss_pred             hhhhhhcCCCCcCCHHHHHH
Confidence            12345778999999999876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.75  E-value=1.1e-18  Score=163.64  Aligned_cols=122  Identities=16%  Similarity=0.190  Sum_probs=100.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------------------chHHHHHHHHHHHHhCCCCCcccccceeEeC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------------------PKKELIINEILVMRENKHPNIVNYLDSYLVG   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------------------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~   62 (400)
                      ||.|.++.||.+.+ ..+..||+|.+.....                  .....+.+|+.++++++  | +++++++.. 
T Consensus        98 iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-  172 (282)
T 1zar_A           98 MGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-  172 (282)
T ss_dssp             EEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-
T ss_pred             eccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-
Confidence            58899999999987 6667888888754321                  13466899999999999  5 777776654 


Q ss_pred             CEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          63 EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        63 ~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +..++||||++|++|.+ +..     .....++.|++.|+.|||+.|++||||||+||+++ ++.++|+|||
T Consensus       173 ~~~~lvmE~~~g~~L~~-l~~-----~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG  237 (282)
T 1zar_A          173 EGNAVLMELIDAKELYR-VRV-----ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFP  237 (282)
T ss_dssp             ETTEEEEECCCCEEGGG-CCC-----SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred             cceEEEEEecCCCcHHH-cch-----hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECC
Confidence            45699999999999988 432     23557999999999999999999999999999999 9999999999

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.60  E-value=4.5e-16  Score=143.78  Aligned_cols=126  Identities=13%  Similarity=0.158  Sum_probs=94.3

Q ss_pred             CCcceEEEEEecCCCceeEE--EEeccccccCc------------------------chHHHHHHHHHHHHhCCCCCc--
Q psy9736           1 MKRGVTIDRFSSDDRRFFSK--ILSNPITLAQQ------------------------PKKELIINEILVMRENKHPNI--   52 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~--va~K~~~~~~~------------------------~~~~~~~~Ei~~l~~l~h~ni--   52 (400)
                      ||.|+++.||.+.+...+..  ||+|.......                        .....+.+|+.+++.+.|+++  
T Consensus        55 ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~  134 (258)
T 1zth_A           55 ISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSV  134 (258)
T ss_dssp             EEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            58899999999977555566  88886543211                        012357899999999988764  


Q ss_pred             ccccceeEeCCEEEEEEeccCC-C----ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHH-hCCeecCCCCCCceEecCCC
Q psy9736          53 VNYLDSYLVGEELWVVMEYLPG-G----SLTDVVTETCMDEGQIAAVCREVLQALEFLH-SNQVIHRDIKSDNILLGLDG  126 (400)
Q Consensus        53 v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~nil~~~~~  126 (400)
                      ...++  .  ...++||||+.+ |    +|.+....  .++..+..++.|++.++.||| +.||+||||||+||+++.  
T Consensus       135 p~~~~--~--~~~~lVmE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--  206 (258)
T 1zth_A          135 PQPYT--Y--MKNVLLMEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--  206 (258)
T ss_dssp             CCEEE--E--ETTEEEEECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--
T ss_pred             CeEEE--c--CCCEEEEEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--
Confidence            23332  1  246899999942 3    56655432  234567899999999999999 999999999999999988  


Q ss_pred             ceEEeccc
Q psy9736         127 SVKLSKWN  134 (400)
Q Consensus       127 ~~~l~dfg  134 (400)
                      .++|+|||
T Consensus       207 ~~~liDFG  214 (258)
T 1zth_A          207 KVYFIDMG  214 (258)
T ss_dssp             SEEECCCT
T ss_pred             cEEEEECc
Confidence            89999999

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.37  E-value=1.2e-13  Score=133.85  Aligned_cols=127  Identities=14%  Similarity=0.103  Sum_probs=86.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--------------chHHH--------HHHHHHHHHhCCCCCcccccce
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--------------PKKEL--------IINEILVMRENKHPNIVNYLDS   58 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--------------~~~~~--------~~~Ei~~l~~l~h~niv~~~~~   58 (400)
                      ||.|.++.||.+.+.. +..||+|.......              .....        ..+|...|.++.+.++....-+
T Consensus       103 IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~  181 (397)
T 4gyi_A          103 IGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPI  181 (397)
T ss_dssp             EEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEE
T ss_pred             eeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence            5889999999987643 56677776432100              01111        2356666666644433222111


Q ss_pred             eEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----------ce
Q psy9736          59 YLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----------SV  128 (400)
Q Consensus        59 ~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----------~~  128 (400)
                      ...  ..++||||++|.+|..+..     ...+..++.|++.++.+||+.|||||||||.||+++.+|          .+
T Consensus       182 ~~~--~~~LVME~i~G~~L~~l~~-----~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~  254 (397)
T 4gyi_A          182 AQS--RHTIVMSLVDALPMRQVSS-----VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTP  254 (397)
T ss_dssp             EEE--TTEEEEECCSCEEGGGCCC-----CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred             ecc--CceEEEEecCCccHhhhcc-----cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccce
Confidence            122  2379999999888865533     223567889999999999999999999999999998876          38


Q ss_pred             EEeccch
Q psy9736         129 KLSKWNR  135 (400)
Q Consensus       129 ~l~dfg~  135 (400)
                      .|+||++
T Consensus       255 ~iID~~Q  261 (397)
T 4gyi_A          255 IIIXFPQ  261 (397)
T ss_dssp             EECCCTT
T ss_pred             EEEEeCC
Confidence            8999983

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.91  E-value=2.1e-09  Score=98.59  Aligned_cols=122  Identities=11%  Similarity=-0.012  Sum_probs=88.5

Q ss_pred             EEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChHHHHhhcC
Q psy9736           7 IDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC   85 (400)
Q Consensus         7 ~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~   85 (400)
                      ..|+.....  ...+++|............+.+|+.+++.+. +.++.++++++...+..|+|||+++|.++.+.+.   
T Consensus        28 ~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~---  102 (263)
T 3tm0_A           28 AKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE---  102 (263)
T ss_dssp             SEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC---
T ss_pred             CeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC---
Confidence            344444332  2456666654321122345789999999984 6677889998888889999999999989877532   


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHh----------------------------------------------------------
Q psy9736          86 MDEGQIAAVCREVLQALEFLHS----------------------------------------------------------  107 (400)
Q Consensus        86 l~~~~~~~i~~qi~~~l~~lH~----------------------------------------------------------  107 (400)
                       +......++.++..++..||+                                                          
T Consensus       103 -~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  181 (263)
T 3tm0_A          103 -DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEE  181 (263)
T ss_dssp             -TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCC
T ss_pred             -CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCC
Confidence             122344677888889999998                                                          


Q ss_pred             -CCeecCCCCCCceEecCCCceEEeccc
Q psy9736         108 -NQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       108 -~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                       ..++|+|++|.||+++..+...|+||+
T Consensus       182 ~~~l~HgDl~~~Nil~~~~~~~~lIDwe  209 (263)
T 3tm0_A          182 ELVFSHGDLGDSNIFVKDGKVSGFIDLG  209 (263)
T ss_dssp             CEEEECSSCCTTSEEEETTEEEEECCCT
T ss_pred             CceEECCCCCcCcEEEECCcEEEEEEch
Confidence             348899999999999876556799998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.62  E-value=2.2e-08  Score=91.13  Aligned_cols=105  Identities=15%  Similarity=0.138  Sum_probs=73.4

Q ss_pred             EEEeccccccCcchHHHHHHHHHHHHhCCCCC--cccccceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHH
Q psy9736          20 KILSNPITLAQQPKKELIINEILVMRENKHPN--IVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCRE   97 (400)
Q Consensus        20 ~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~q   97 (400)
                      ++++|.....   ....+.+|+.+++.+.+.+  +.+++.+...++..+++|||++|.++.  ...  ..   ...++.+
T Consensus        46 ~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~--~~---~~~~~~~  115 (264)
T 1nd4_A           46 VLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH--LA---PAEKVSI  115 (264)
T ss_dssp             CEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC--CC---HHHHHHH
T ss_pred             eEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc--CC---HhHHHHH
Confidence            4555554322   1234678999999885444  456888887777899999999998884  211  12   1245556


Q ss_pred             HHHHHHHHHhCC----------------------------------------------------------eecCCCCCCc
Q psy9736          98 VLQALEFLHSNQ----------------------------------------------------------VIHRDIKSDN  119 (400)
Q Consensus        98 i~~~l~~lH~~~----------------------------------------------------------ivH~dikp~n  119 (400)
                      +...+..||+..                                                          ++|+|++|.|
T Consensus       116 l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~N  195 (264)
T 1nd4_A          116 MADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPN  195 (264)
T ss_dssp             HHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGG
T ss_pred             HHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCc
Confidence            666666666532                                                          8999999999


Q ss_pred             eEecCCCceEEeccc
Q psy9736         120 ILLGLDGSVKLSKWN  134 (400)
Q Consensus       120 il~~~~~~~~l~dfg  134 (400)
                      |+++.++...++||+
T Consensus       196 il~~~~~~~~liD~~  210 (264)
T 1nd4_A          196 IMVENGRFSGFIDCG  210 (264)
T ss_dssp             EEEETTEEEEECCCT
T ss_pred             EEEECCcEEEEEcch
Confidence            999876666799999

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.51  E-value=2.2e-07  Score=89.23  Aligned_cols=130  Identities=17%  Similarity=0.254  Sum_probs=88.5

Q ss_pred             CcceEEEEEecCCCceeEEEEecccc--ccC-cchHHHHHHHHHHHHhCCC--CCcccccceeEeC---CEEEEEEeccC
Q psy9736           2 KRGVTIDRFSSDDRRFFSKILSNPIT--LAQ-QPKKELIINEILVMRENKH--PNIVNYLDSYLVG---EELWVVMEYLP   73 (400)
Q Consensus         2 g~G~~~~v~~~~~~~~~~~va~K~~~--~~~-~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~~~   73 (400)
                      +.|....+|..+...  .++++|...  ... ....+.+.+|+.+++.+..  ..+.+++.++.+.   +..++||||++
T Consensus        47 ~~G~sn~~y~v~~~~--~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~  124 (359)
T 3dxp_A           47 KGGQSNPTFKLVTPG--QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVS  124 (359)
T ss_dssp             CC-CCSCEEEEECSS--CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCC
T ss_pred             CCcccceEEEEEECC--ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecC
Confidence            445444444443322  345666554  221 1223567899999999864  4567777777655   45789999999


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh----------------------------------------------
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHS----------------------------------------------  107 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~----------------------------------------------  107 (400)
                      |..+.+..- ..++......++.++...|..||.                                              
T Consensus       125 G~~l~~~~~-~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (359)
T 3dxp_A          125 GRVLWDQSL-PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDW  203 (359)
T ss_dssp             CBCCCCTTC-TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHH
T ss_pred             CeecCCCcc-ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHH
Confidence            887754211 236778888899999999999996                                              


Q ss_pred             ------------CCeecCCCCCCceEecCCCc--eEEeccc
Q psy9736         108 ------------NQVIHRDIKSDNILLGLDGS--VKLSKWN  134 (400)
Q Consensus       108 ------------~~ivH~dikp~nil~~~~~~--~~l~dfg  134 (400)
                                  ..++|+|+++.||+++.++.  +.++||+
T Consensus       204 l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe  244 (359)
T 3dxp_A          204 LPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWE  244 (359)
T ss_dssp             GGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCT
T ss_pred             HHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcc
Confidence                        35899999999999987753  6899998

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.90  E-value=1.8e-05  Score=73.91  Aligned_cols=125  Identities=14%  Similarity=0.191  Sum_probs=82.7

Q ss_pred             CcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCc--ccccceeEeCC---EEEEEEeccCCC
Q psy9736           2 KRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNI--VNYLDSYLVGE---ELWVVMEYLPGG   75 (400)
Q Consensus         2 g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~ni--v~~~~~~~~~~---~~~lv~e~~~~~   75 (400)
                      +.|....+|...+     ++++|.-..  ....+.+.+|..+++.+. +..+  .+++.....+.   ..|+||++++|.
T Consensus        29 ~~G~~n~v~~v~~-----~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~  101 (304)
T 3sg8_A           29 GEGNDCIAYEINR-----DFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV  101 (304)
T ss_dssp             EECSSEEEEESTT-----SEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred             CCCCcceEEEECC-----EEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence            4577777777763     345554321  124567889999999873 3332  33333322222   348899999998


Q ss_pred             ChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------------
Q psy9736          76 SLTDVVTETCMDEGQIAAVCREVLQALEFLHS------------------------------------------------  107 (400)
Q Consensus        76 ~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~------------------------------------------------  107 (400)
                      ++..... ..++......++.++...+..||+                                                
T Consensus       102 ~l~~~~~-~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  180 (304)
T 3sg8_A          102 PLTPLLL-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI  180 (304)
T ss_dssp             ECCHHHH-HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred             ECCcccc-ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence            8765322 235666667777777777777774                                                


Q ss_pred             ----------CCeecCCCCCCceEecC--CCceEEeccc
Q psy9736         108 ----------NQVIHRDIKSDNILLGL--DGSVKLSKWN  134 (400)
Q Consensus       108 ----------~~ivH~dikp~nil~~~--~~~~~l~dfg  134 (400)
                                ..++|+|++|.||+++.  .+.+.++||+
T Consensus       181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~  219 (304)
T 3sg8_A          181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFG  219 (304)
T ss_dssp             HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCT
T ss_pred             HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCC
Confidence                      14689999999999998  4567899998

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.73  E-value=0.00016  Score=65.91  Aligned_cols=109  Identities=14%  Similarity=0.171  Sum_probs=72.1

Q ss_pred             EEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHH
Q psy9736          20 KILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREV   98 (400)
Q Consensus        20 ~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi   98 (400)
                      .+++|.-.   ......+.+|...|+.+. +--+.+++.++..++..++|||+++|.++.+.....   ......+..++
T Consensus        52 ~~~lk~~~---~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~---~~~~~~~~~~l  125 (272)
T 4gkh_A           52 ELFLKHGK---GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY---PDSGENIVDAL  125 (272)
T ss_dssp             CEEEEEEE---THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC---GGGHHHHHHHH
T ss_pred             EEEEEECC---CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC---HHHHHHHHHHH
Confidence            35555532   224466789999998874 334667788888888999999999988776654321   11112233333


Q ss_pred             HHHHHHHHh----------------------------------------------------------CCeecCCCCCCce
Q psy9736          99 LQALEFLHS----------------------------------------------------------NQVIHRDIKSDNI  120 (400)
Q Consensus        99 ~~~l~~lH~----------------------------------------------------------~~ivH~dikp~ni  120 (400)
                      ...+.-||.                                                          ..++|+|+.+.||
T Consensus       126 ~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Ni  205 (272)
T 4gkh_A          126 AVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNL  205 (272)
T ss_dssp             HHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSE
T ss_pred             HHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeE
Confidence            333333332                                                          0258999999999


Q ss_pred             EecCCCceEEeccc
Q psy9736         121 LLGLDGSVKLSKWN  134 (400)
Q Consensus       121 l~~~~~~~~l~dfg  134 (400)
                      +++..+..-|+||+
T Consensus       206 l~~~~~~~~viDwe  219 (272)
T 4gkh_A          206 IFDEGKLIGCIDVG  219 (272)
T ss_dssp             EEETTEEEEECCCT
T ss_pred             EEECCeEEEEEECc
Confidence            99887777899998

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.67  E-value=0.0003  Score=65.80  Aligned_cols=70  Identities=14%  Similarity=0.027  Sum_probs=42.7

Q ss_pred             cceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCC---CcccccceeE-eCCEEEEEEeccCCCChH
Q psy9736           3 RGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHP---NIVNYLDSYL-VGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         3 ~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~~~L~   78 (400)
                      .|....+|.. +..    +++|.-  ........+.+|..+|+.+.+.   .+.+.+.+.. .++..+++|++++|.++.
T Consensus        29 ~G~~n~v~~v-g~~----~VlR~~--~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~  101 (306)
T 3tdw_A           29 EGFRNYAILV-NGD----WVFRFP--KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILG  101 (306)
T ss_dssp             ECSSEEEEEE-TTT----EEEEEE--SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECH
T ss_pred             CCcceeEEEE-CCE----EEEEec--CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECc
Confidence            4544455555 333    334432  1222456788999999998653   2344454443 345678999999998776


Q ss_pred             H
Q psy9736          79 D   79 (400)
Q Consensus        79 ~   79 (400)
                      .
T Consensus       102 ~  102 (306)
T 3tdw_A          102 E  102 (306)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.13  E-value=0.00037  Score=66.32  Aligned_cols=61  Identities=13%  Similarity=0.051  Sum_probs=36.8

Q ss_pred             eEEEEeccccccC---cchHHHHHHHHHHHHhCC-C--CCcccccceeEeC---CEEEEEEeccCCCChH
Q psy9736          18 FSKILSNPITLAQ---QPKKELIINEILVMRENK-H--PNIVNYLDSYLVG---EELWVVMEYLPGGSLT   78 (400)
Q Consensus        18 ~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~-h--~niv~~~~~~~~~---~~~~lv~e~~~~~~L~   78 (400)
                      ..++++|......   ......+.+|+.+++.+. +  -.+.+++.+....   +..+++||+++|.++.
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            3456666543322   001244678888888873 2  2456666665543   3568999999886654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.07  E-value=4.8e-05  Score=73.11  Aligned_cols=47  Identities=19%  Similarity=0.186  Sum_probs=39.5

Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .....||..|+|||.+.|..                          .|....|+||+|++++++++|..+|..
T Consensus       203 ~~~~~GT~~Y~APE~l~~~~--------------------------~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          203 VAPRAGTPGFRAPEVLTKCP--------------------------NQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             ---CCCCGGGCCHHHHTTCS--------------------------CCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             ccccccCccccCHHHHcCCC--------------------------CCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            34567999999999998876                          577889999999999999999988754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.05  E-value=6.9e-05  Score=71.15  Aligned_cols=44  Identities=16%  Similarity=0.205  Sum_probs=39.0

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..||..|+|||.+.|+.                           |....|+|++|++++++++|..+|...
T Consensus       216 ~~GT~~YmAPE~~~~~~---------------------------y~~~~DiwSlGvilyemltG~~Pf~~~  259 (336)
T 4g3f_A          216 IPGTETHMAPEVVMGKP---------------------------CDAKVDIWSSCCMMLHMLNGCHPWTQY  259 (336)
T ss_dssp             CCCCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             cccCccccCHHHHCCCC---------------------------CCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            46899999999999875                           667899999999999999999999653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.01  E-value=6.4e-05  Score=73.18  Aligned_cols=45  Identities=18%  Similarity=0.289  Sum_probs=40.1

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ...||..|+|||++.|..                          .|....|+||+|++++++++|.++|.+
T Consensus       221 ~~~GT~~Y~APEv~~~~~--------------------------~~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          221 EYVATRWYRAPELMLSLH--------------------------EYTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             SSCCCCTTCCHHHHTTCS--------------------------CCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cceeChHhcCHHHhcCCC--------------------------CCCChhheehhHHHHHHHHHCCCCCCC
Confidence            357899999999999876                          567889999999999999999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=96.99  E-value=5.2e-05  Score=71.23  Aligned_cols=85  Identities=13%  Similarity=0.152  Sum_probs=57.6

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|.-.  +-.++-+.+-|..+..+-+      ......         ....||..|+|||.+.++.
T Consensus       148 lH~~~IiHRDlKPeNILl~--~~g~vKl~DFGla~~~~~~------~~~~~~---------~~~~GTp~YmAPEvl~~~~  210 (311)
T 4aw0_A          148 LHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPE------SKQARA---------NSFVGTAQYVSPELLTEKS  210 (311)
T ss_dssp             HHHTTEECSCCSGGGEEEC--TTSCEEECCCTTCEECCTT------TTCCCB---------CCCCSCGGGCCHHHHHHSC
T ss_pred             HHHCCCccCCCCHHHeEEc--CCCCEEEEEcCCceecCCC------CCcccc---------cCcccCcccCCHHHHcCCC
Confidence            444455663    244421  2246777788877765422      111111         1246899999999998865


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                 |....|+|++|++++++++|..+|..
T Consensus       211 ---------------------------y~~~~DiWSlGvilyeml~G~~PF~~  236 (311)
T 4aw0_A          211 ---------------------------ACKSSDLWALGCIIYQLVAGLPPFRA  236 (311)
T ss_dssp             ---------------------------BCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------------------CCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                                       67789999999999999999999965

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=96.94  E-value=0.00014  Score=67.93  Aligned_cols=87  Identities=18%  Similarity=0.241  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhhhccccc------------cceeeeecccccccccccccCCCCCC------------
Q psy9736         178 ELIINEILVMRENKHPNIVNYLDSYLVGEE------------LWNIVNYLDSYLVGEELWYTKPIEEP------------  233 (400)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~------------  233 (400)
                      +.+.+|+..++.++|||||.+.+.+...+.            +|-+++.+...-............+.            
T Consensus        48 ~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi  127 (299)
T 4g31_A           48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI  127 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence            456889999999999999999988765443            45555555321111101111111111            


Q ss_pred             -----------CCcccccccc---CCCCCCCCCCCCCCCCCCCCC
Q psy9736         234 -----------SNTTDEKTST---SSASPLSTPPLSLIQPPPPST  264 (400)
Q Consensus       234 -----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  264 (400)
                                 -..+|+++.+   +..+.+|.+|||.+.......
T Consensus       128 ~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~  172 (299)
T 4g31_A          128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE  172 (299)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------
T ss_pred             HHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCc
Confidence                       1457888877   577899999999987665443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=96.93  E-value=9.1e-05  Score=70.60  Aligned_cols=172  Identities=11%  Similarity=0.111  Sum_probs=93.4

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHH--HHHHHHHHHHhC------C-CCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKE--LIINEILVMREN------K-HPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~--~~~~Ei~~l~~l------~-h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ++.|.++.+.. .+++.+|.|++-+.-.........  .+++.+.-=.-+      . ..++.=+.+++. ++.   +.+
T Consensus        85 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~-gg~---L~~  160 (346)
T 4fih_A           85 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE-GGA---LTD  160 (346)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT-TEE---HHH
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC-CCc---HHH
Confidence            57898888765 578889999886554333332222  233333211111      1 122222223332 221   223


Q ss_pred             ccCCCChHHHHhhcCCCHHHHHHHHH--HHHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          71 YLPGGSLTDVVTETCMDEGQIAAVCR--EVLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        71 ~~~~~~L~~~i~~~~l~~~~~~~i~~--qi~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      ++..+.+..-...     .....++.  +.+.....+|.    .+|.-.  .-.++-+.+-|..+..+-.  ...     
T Consensus       161 ~l~~~~l~e~~~~-----~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~--~~g~vKl~DFGla~~~~~~--~~~-----  226 (346)
T 4fih_A          161 IVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKE--VPR-----  226 (346)
T ss_dssp             HHHHSCCCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--TTCCEEECCCTTCEECCSS--SCC-----
T ss_pred             HHHcCCCCHHHHH-----HHHHHHHHHHHHHHHCCcccccCCHHHEEEC--CCCCEEEecCcCceecCCC--CCc-----
Confidence            3333333221111     11222222  22444555673    245421  2246777777876654322  111     


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      .          ....||..|+|||.+.+..                           |....|+|++|++++++++|.++
T Consensus       227 ~----------~~~~GTp~YmAPEvl~~~~---------------------------y~~~~DiWSlGvilyeml~G~~P  269 (346)
T 4fih_A          227 R----------KSLVGTPYWMAPELISRLP---------------------------YGPEVDIWSLGIMVIEMVDGEPP  269 (346)
T ss_dssp             B----------CCCCSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             c----------cccccCcCcCCHHHHCCCC---------------------------CCcHHHHHHHHHHHHHHHHCCCC
Confidence            0          1246899999999998765                           77889999999999999999999


Q ss_pred             ccc
Q psy9736         225 WYT  227 (400)
Q Consensus       225 ~~~  227 (400)
                      |..
T Consensus       270 F~~  272 (346)
T 4fih_A          270 YFN  272 (346)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            865

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=96.93  E-value=6.8e-05  Score=69.18  Aligned_cols=43  Identities=16%  Similarity=0.084  Sum_probs=35.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.|+.                          .+....|+||+|++++++++|..+|..
T Consensus       172 ~GT~~Y~APE~~~~~~--------------------------y~~~~~DiwSlGvily~lltg~~PF~~  214 (275)
T 3hyh_A          172 CGSPNYAAPEVISGKL--------------------------YAGPEVDVWSCGVILYVMLCRRLPFDD  214 (275)
T ss_dssp             ---CTTSCHHHHSSSS--------------------------CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             eECcccCChhhhcCCC--------------------------CCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence            5889999999999876                          345678999999999999999999865

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=96.91  E-value=8.5e-05  Score=69.57  Aligned_cols=43  Identities=14%  Similarity=0.127  Sum_probs=38.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           |....|+||+|++++++++|..+|..
T Consensus       186 ~~GT~~YmAPE~~~~~~---------------------------y~~~~DiwSlGvilyemltG~~PF~~  228 (304)
T 3ubd_A          186 FCGTVEYMAPEVVNRRG---------------------------HTQSADWWSFGVLMFEMLTGTLPFQG  228 (304)
T ss_dssp             CCCCGGGCCHHHHHTSC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccCcccCCHHHhccCC---------------------------CCCCCcccchHHHHHHHHhCCCCCCC
Confidence            35899999999998865                           66789999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=96.84  E-value=0.00012  Score=68.19  Aligned_cols=42  Identities=12%  Similarity=0.052  Sum_probs=36.5

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+                            .|....|+||+|++++++++|..+|..
T Consensus       190 ~~GTp~YmAPE~~~~----------------------------~y~~~~DiwSlGvilyelltg~~Pf~~  231 (290)
T 3fpq_A          190 VIGTPEFMAPEMYEE----------------------------KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             SCSSCCCCCGGGGGT----------------------------CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCccccCHHHcCC----------------------------CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            358999999999865                            466789999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=96.82  E-value=0.0001  Score=70.45  Aligned_cols=83  Identities=14%  Similarity=0.214  Sum_probs=56.7

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|.-.  +-.++-+.+-|..+..+-+  ..  .  ... .          .||..|+|||.+.|+.
T Consensus       141 lH~~~IiHRDlKp~NILl~--~~g~vKl~DFGla~~~~~~--~~--~--~~~-~----------~GT~~YmAPE~l~~~~  201 (350)
T 4b9d_A          141 VHDRKILHRDIKSQNIFLT--KDGTVQLGDFGIARVLNST--VE--L--ARA-C----------IGTPYYLSPEICENKP  201 (350)
T ss_dssp             HHHTTCEETTCCGGGEEEC--TTCCEEECSTTEESCCCHH--HH--H--HHH-H----------HSCCTTCCHHHHTTCC
T ss_pred             HHHCCeeeccCCHHHEEEC--CCCCEEEcccccceeecCC--cc--c--ccc-c----------CCCccccCHHHHCCCC
Confidence            344556673    245421  2246778888877654432  11  1  111 1          3788999999999875


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                 |....|+|++|++++++++|..+|..
T Consensus       202 ---------------------------y~~~~DiwSlGvilyemltG~~PF~~  227 (350)
T 4b9d_A          202 ---------------------------YNNKSDIWALGCVLYELCTLKHAFEA  227 (350)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ---------------------------CCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                                       66789999999999999999999965

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.81  E-value=0.0019  Score=62.46  Aligned_cols=73  Identities=15%  Similarity=-0.003  Sum_probs=41.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-------chHHHHHHHHHHHHhCCC--C-CcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-------PKKELIINEILVMRENKH--P-NIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-------~~~~~~~~Ei~~l~~l~h--~-niv~~~~~~~~~~~~~lv~e   70 (400)
                      +|.|....+|++.......++++|.......       ...+++..|..+++.+..  + .+.+++.+  +....++|||
T Consensus        38 lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE  115 (397)
T 2olc_A           38 IGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVME  115 (397)
T ss_dssp             CCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEEC
T ss_pred             CCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEE
Confidence            4678788888875433345677775432111       123456789999887732  2 33344432  3445689999


Q ss_pred             ccCCC
Q psy9736          71 YLPGG   75 (400)
Q Consensus        71 ~~~~~   75 (400)
                      ++++.
T Consensus       116 ~l~g~  120 (397)
T 2olc_A          116 DLSHL  120 (397)
T ss_dssp             CCTTS
T ss_pred             eCCCc
Confidence            99763

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=96.66  E-value=0.00017  Score=70.63  Aligned_cols=172  Identities=11%  Similarity=0.112  Sum_probs=93.4

Q ss_pred             CCcceEEEEE-ecCCCceeEEEEeccccccCcchH--HHHHHHHHHHHhC------C-CCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRF-SSDDRRFFSKILSNPITLAQQPKK--ELIINEILVMREN------K-HPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~-~~~~~~~~~~va~K~~~~~~~~~~--~~~~~Ei~~l~~l------~-h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ++.|.++.+. ..+++.+|.|++-+.-......-.  -.+++.+.-=.-+      . ..++.-+.+++. ++.   +.+
T Consensus       162 G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~-gG~---L~~  237 (423)
T 4fie_A          162 GSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE-GGA---LTD  237 (423)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT-TEE---HHH
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC-CCc---HHH
Confidence            5789777776 457888999988665443333222  2233333211111      1 122221223332 222   223


Q ss_pred             ccCCCChHHHHhhcCCCHHHHHHHHH--HHHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccc
Q psy9736          71 YLPGGSLTDVVTETCMDEGQIAAVCR--EVLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE  144 (400)
Q Consensus        71 ~~~~~~L~~~i~~~~l~~~~~~~i~~--qi~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~  144 (400)
                      ++..+.+.+-...     .....++.  +.+.....+|.    .+|.-.  .-.++-+.+-|..+..+-.  ...    .
T Consensus       238 ~i~~~~l~e~~~~-----~~~~qil~aL~ylH~~~IiHRDiKp~NILl~--~~g~vKl~DFGla~~~~~~--~~~----~  304 (423)
T 4fie_A          238 IVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKE--VPR----R  304 (423)
T ss_dssp             HHHHSCCCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCSTTTEEEC--TTCCEEECCCTTCEECCSS--CCC----B
T ss_pred             HHhccCCCHHHHH-----HHHHHHHHHHHHHHHCCeecccCCHHHEEEc--CCCCEEEecCccceECCCC--Ccc----c
Confidence            3333333221111     11222222  22444555673    255421  1246777787877654322  111    0


Q ss_pred             cchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         145 ISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                                 ....||..|+|||.+.+..                           |....|+|++|++++++++|.++
T Consensus       305 -----------~~~~GTp~YmAPEvl~~~~---------------------------y~~~~DiWSlGvilyeml~G~~P  346 (423)
T 4fie_A          305 -----------KSLVGTPYWMAPELISRLP---------------------------YGPEVDIWSLGIMVIEMVDGEPP  346 (423)
T ss_dssp             -----------CCCEECTTTCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------cccccCcCcCCHHHHCCCC---------------------------CCcHHHHHHHHHHHHHHHHCCCC
Confidence                       1246899999999998865                           77889999999999999999999


Q ss_pred             ccc
Q psy9736         225 WYT  227 (400)
Q Consensus       225 ~~~  227 (400)
                      |..
T Consensus       347 F~~  349 (423)
T 4fie_A          347 YFN  349 (423)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            865

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.60  E-value=0.013  Score=54.68  Aligned_cols=27  Identities=22%  Similarity=0.380  Sum_probs=25.1

Q ss_pred             CCeecCCCCCCceEecCCCceEEeccc
Q psy9736         108 NQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       108 ~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ..++|+|+++.||+++.++.+.++||+
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe  248 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLD  248 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCT
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehh
Confidence            479999999999999888889999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=96.45  E-value=0.00027  Score=66.19  Aligned_cols=46  Identities=11%  Similarity=0.139  Sum_probs=38.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+....                        .|....|+||+|+++.|+++|..+|..
T Consensus       194 ~~GT~~ymAPE~l~~~~~~------------------------~y~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          194 PTGSVLWMAPEVIRMQDNN------------------------PFSFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             CCCCTTSCCHHHHHCCSSC------------------------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCCCccCHHHhhccCCC------------------------CCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence            3588999999999775411                        467889999999999999999999865

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=96.41  E-value=0.00032  Score=72.42  Aligned_cols=83  Identities=11%  Similarity=0.024  Sum_probs=56.8

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|.-.  .-.+|-+.+-|..+..+-+  ...                 ...||..|+|||.+.+..
T Consensus       308 LH~~gIiHRDLKPeNILld--~~G~vKL~DFGlA~~~~~~--~~~-----------------t~~GTp~YmAPEvl~~~~  366 (689)
T 3v5w_A          308 MHNRFVVYRDLKPANILLD--EHGHVRISDLGLACDFSKK--KPH-----------------ASVGTHGYMAPEVLQKGV  366 (689)
T ss_dssp             HHTTTEECCCCSGGGEEEC--TTSCEEECCCTTCEECSSC--CCC-----------------SCCSCGGGCCHHHHSTTC
T ss_pred             HHHCCccccCCchHHeEEe--CCCCEEecccceeeecCCC--CCC-----------------CccCCcCccCHHHHhCCC
Confidence            445556663    244421  1246777777776644322  111                 135899999999997654


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                .|....|+|++|++++++++|.++|...
T Consensus       367 --------------------------~y~~~vDiWSLGvilYEmLtG~~PF~~~  394 (689)
T 3v5w_A          367 --------------------------AYDSSADWFSLGCMLFKLLRGHSPFRQH  394 (689)
T ss_dssp             --------------------------CCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred             --------------------------CCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                                      4778899999999999999999999753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=95.89  E-value=0.0008  Score=68.61  Aligned_cols=172  Identities=14%  Similarity=0.184  Sum_probs=93.2

Q ss_pred             CCcceEEEEE-ecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC---------CCC-CcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRF-SSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN---------KHP-NIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~-~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l---------~h~-niv~~~~~~~~~~~~~lv~   69 (400)
                      ++.|.++.+. ..+++.+|.|++.+.-........+++ +-+..++.-         ... ++.-+.+++. ++.   ++
T Consensus       168 G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei-~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~-gg~---L~  242 (573)
T 3uto_A          168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEI-QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS-GGE---LF  242 (573)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHH-HHHHHTCCTTBCCEEEEEECSSEEEEEEECCC-CCB---HH
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHH-HHHHhCCCCCCCeEEEEEEECCEEEEEEeecC-CCc---HH
Confidence            4678777765 567888899988776443332222222 223333331         122 2222223332 222   12


Q ss_pred             eccC--CCChHHHHhhcCCCHHHHHHHHH--HHHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          70 EYLP--GGSLTDVVTETCMDEGQIAAVCR--EVLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        70 e~~~--~~~L~~~i~~~~l~~~~~~~i~~--qi~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +++.  .+.+......     ..+..++.  +.+.....+|.    .+|.-.+-...++-+.+-|..+..+-+      .
T Consensus       243 ~~i~~~~~~l~e~~~~-----~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~------~  311 (573)
T 3uto_A          243 EKVADEHNKMSEDEAV-----EYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK------Q  311 (573)
T ss_dssp             HHHTCTTSCEEHHHHH-----HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT------S
T ss_pred             HHHHHhCCCCCHHHHH-----HHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC------C
Confidence            3331  2333322111     11222222  22445556673    255432223346777777776654432      1


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      ....            ..||..|+|||.+.|+.                           |....|+|++|++++++++|
T Consensus       312 ~~~~------------~~GT~~y~APEv~~~~~---------------------------y~~~~DiWSlGvilyeml~G  352 (573)
T 3uto_A          312 SVKV------------TTGTAEFAAPEVAEGKP---------------------------VGYYTDMWSVGVLSYILLSG  352 (573)
T ss_dssp             EEEE------------ECSSGGGCCHHHHTTCC---------------------------BCHHHHHHHHHHHHHHHHHS
T ss_pred             ceee------------eEECccccCHHHhCCCC---------------------------CCcHHHHHHHHHHHHHHHHC
Confidence            1111            13788899999999875                           66778999999999999999


Q ss_pred             cccccc
Q psy9736         222 EELWYT  227 (400)
Q Consensus       222 ~~~~~~  227 (400)
                      .++|..
T Consensus       353 ~~Pf~~  358 (573)
T 3uto_A          353 LSPFGG  358 (573)
T ss_dssp             CCSSCC
T ss_pred             CCCCCC
Confidence            999865

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=95.84  E-value=0.00094  Score=64.32  Aligned_cols=48  Identities=23%  Similarity=0.364  Sum_probs=39.7

Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .....+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|...
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          187 LTDYVATRWYRAPEILLGST--------------------------KYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             ---CCCGGGGCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccCCcccCCcCCHHHhcCCC--------------------------CCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            35567899999999998865                          5778899999999999999999998653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=95.70  E-value=0.00084  Score=62.60  Aligned_cols=42  Identities=17%  Similarity=0.332  Sum_probs=36.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           |....|+||+|+++.|++| |..+|..
T Consensus       191 ~gt~~ymAPE~~~~~~---------------------------~~~k~DVwS~Gvvl~Ellt~G~~Pf~~  233 (299)
T 4asz_A          191 MLPIRWMPPESIMYRK---------------------------FTTESDVWSLGVVLWEIFTYGKQPWYQ  233 (299)
T ss_dssp             EECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ecChhhcCHHHHcCCC---------------------------CCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence            3677899999998765                           6678999999999999998 8888865

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=95.68  E-value=0.0013  Score=62.27  Aligned_cols=42  Identities=17%  Similarity=0.312  Sum_probs=36.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           |....|+||+|+++.|++| |..+|..
T Consensus       221 ~gt~~ymAPE~~~~~~---------------------------~~~~sDvwS~Gvvl~Ellt~G~~Pf~~  263 (329)
T 4aoj_A          221 MLPIRWMPPESILYRK---------------------------FTTESDVWSFGVVLWEIFTYGKQPWYQ  263 (329)
T ss_dssp             CCCGGGCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             cccccccChhhhcCCC---------------------------CCccccccchHHHHHHHHcCCCCCCCC
Confidence            4678899999998875                           6678899999999999998 8888865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=95.63  E-value=0.0011  Score=63.30  Aligned_cols=43  Identities=14%  Similarity=0.153  Sum_probs=36.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                           |....|+||+|+++.|++| |..+|...
T Consensus       248 ~gt~~ymAPE~l~~~~---------------------------y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          248 RLPLKWMAPETIFDRV---------------------------YTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             EECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             cccccccCHHHHhcCC---------------------------CCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            3577899999998765                           6788999999999999998 88888653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=95.62  E-value=0.0011  Score=62.08  Aligned_cols=42  Identities=12%  Similarity=0.130  Sum_probs=36.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           |....|+||+|+++.|++| |..+|..
T Consensus       208 ~gt~~ymAPE~l~~~~---------------------------~s~ksDVwSfGvvl~El~t~g~~Pf~~  250 (308)
T 4gt4_A          208 LLPIRWMAPEAIMYGK---------------------------FSIDSDIWSYGVVLWEVFSYGLQPYCG  250 (308)
T ss_dssp             CBCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ccCCcccCHHHHhCCC---------------------------CCccchhhhHHHHHHHHHhCCCCCCCC
Confidence            4678899999988764                           6788999999999999998 7888765

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.23  E-value=0.066  Score=49.96  Aligned_cols=70  Identities=9%  Similarity=-0.009  Sum_probs=45.5

Q ss_pred             cceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC---CCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           3 RGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK---HPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         3 ~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      .|..-.+|..+..  ...+++|....   .....+..|...|+.+.   ...+.+++.+....+..++|||++++..+
T Consensus        46 gG~~n~~y~v~~~--~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           46 SGEMNEIWLINDE--VQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             CSSSSEEEEEESS--SCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             CccceeeeEEEEC--CCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            3444444444332  23455665432   23566889999998873   34577778777777889999999988654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=95.18  E-value=0.0023  Score=59.72  Aligned_cols=75  Identities=9%  Similarity=-0.120  Sum_probs=47.9

Q ss_pred             ceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhh
Q psy9736         119 NILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNY  198 (400)
Q Consensus       119 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (400)
                      ++-+.+-|..+..+-+  ... .....          ....||..|+|||.+.+.....                     
T Consensus       146 ~~Ki~DFGla~~~~~~--~~~-~~~~~----------~~~~GT~~ymAPE~l~~~~~~~---------------------  191 (303)
T 3hmm_A          146 TCCIADLGLAVRHDSA--TDT-IDIAP----------NHRVGTKRYMAPEVLDDSINMK---------------------  191 (303)
T ss_dssp             CEEECCCTTCEEEETT--TTE-ESCC---------------CCGGGCCHHHHTTCSCTT---------------------
T ss_pred             CEEEEeCCCCccccCC--CCc-eeeec----------ccccccccccCHHHhccccccc---------------------
Confidence            5677777877665533  111 11111          1246899999999998753100                     


Q ss_pred             hhhhccccccceeeeeccccccccccccc
Q psy9736         199 LDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ...+....|+||+|+++.|+++|.+++..
T Consensus       192 ~~~~~~k~DVwS~Gvvl~El~tg~~~~~~  220 (303)
T 3hmm_A          192 HFESFKRADIYAMGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred             CCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence            01466789999999999999999887654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=95.14  E-value=0.044  Score=53.22  Aligned_cols=27  Identities=15%  Similarity=0.384  Sum_probs=24.2

Q ss_pred             hCCeecCCCCCCceEecCCCceEEeccc
Q psy9736         107 SNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       107 ~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      ...++|+|+++.||+++.++ +.++||+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e  257 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPE  257 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCT
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCc
Confidence            45789999999999998777 9999997

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=94.76  E-value=0.0032  Score=61.42  Aligned_cols=44  Identities=20%  Similarity=0.347  Sum_probs=37.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|++++++++|.++|...
T Consensus       217 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwSlG~il~ell~G~~pf~~~  260 (420)
T 1j1b_A          217 ICSRYYRAPELIFGAT--------------------------DYTSSIDVWSAGCVLAELLLGQPIFPGD  260 (420)
T ss_dssp             CSCTTSCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eeCCCcCCHHHHcCCC--------------------------CCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            4577899999998765                          4677899999999999999999998753

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=94.63  E-value=0.029  Score=51.77  Aligned_cols=25  Identities=20%  Similarity=0.370  Sum_probs=21.9

Q ss_pred             CeecCCCCCCceEecCCCceEEeccc
Q psy9736         109 QVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .++|+|+.+.||+ ..++.+.++||.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e  198 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWE  198 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCT
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecc
Confidence            4799999999999 566778999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=94.61  E-value=0.0038  Score=60.32  Aligned_cols=68  Identities=19%  Similarity=0.222  Sum_probs=49.4

Q ss_pred             CCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchh
Q psy9736         117 SDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIV  196 (400)
Q Consensus       117 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
                      -..+.+..-|..+...-+  ...     .           ...+|..|+|||.+.+..                      
T Consensus       178 ~~~~kL~DFG~a~~~~~~--~~~-----~-----------~~~~t~~y~aPE~~~~~~----------------------  217 (394)
T 4e7w_A          178 SGVLKLIDFGSAKILIAG--EPN-----V-----------SYICSRYYRAPELIFGAT----------------------  217 (394)
T ss_dssp             TTEEEECCCTTCEECCTT--CCC-----C-----------SSCSCGGGCCHHHHTTCS----------------------
T ss_pred             CCcEEEeeCCCcccccCC--CCC-----c-----------ccccCcCccCHHHHcCCC----------------------
Confidence            345667777776655433  111     1           124577899999998865                      


Q ss_pred             hhhhhhccccccceeeeecccccccccccccC
Q psy9736         197 NYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                          .+....|+|++|++++++++|.++|...
T Consensus       218 ----~~~~~~DiwSlG~il~ell~g~~pf~~~  245 (394)
T 4e7w_A          218 ----NYTTNIDIWSTGCVMAELMQGQPLFPGE  245 (394)
T ss_dssp             ----SCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----CCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                5678899999999999999999998753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=94.58  E-value=0.0046  Score=57.04  Aligned_cols=171  Identities=16%  Similarity=0.163  Sum_probs=104.2

Q ss_pred             HHHHHHHHH-hhcCCCchhhhhhhhcc----ccccceeeeeccc-ccccccccc-cCCCCCCC-----------------
Q psy9736         179 LIINEILVM-RENKHPNIVNYLDSYLV----GEELWNIVNYLDS-YLVGEELWY-TKPIEEPS-----------------  234 (400)
Q Consensus       179 ~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~l~~~~~~~-~~~~~~~~-----------------  234 (400)
                      ...+|+..+ +..+|+|++...+.+..    ...+|-+++.+.. .|....... .....+..                 
T Consensus        56 ~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  135 (299)
T 3m2w_A           56 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS  135 (299)
T ss_dssp             HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            445666665 67799999999987765    4445555554432 111111000 01111111                 


Q ss_pred             ---Ccccccccc---CC---CCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC
Q psy9736         235 ---NTTDEKTST---SS---ASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG  305 (400)
Q Consensus       235 ---~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~  305 (400)
                         ...++++.+   +.   .+.++..|||....                      +.+..+...+|.||+|+++|||++
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~----------------------~~~~~~~~~~DiwslG~il~el~t  193 (299)
T 3m2w_A          136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE----------------------TTGEKYDKSCDMWSLGVIMYILLC  193 (299)
T ss_dssp             TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE----------------------CTTCGGGGHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCHHHEEEecCCCCCcEEEeccccccc----------------------cccccCCchhhHHHHHHHHHHHHH
Confidence               224555555   22   57789999997432                      223345578999999999999999


Q ss_pred             CCCcccccccccCcchhhcHHHHHHHHHh---CCCCCcc--hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         306 PHKWSFQPHFLIPYLFILSCRQALYLIAT---NKKPEIK--EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       306 gd~ws~g~~~~~P~~~~~~~~~~~~~i~~---~~~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                      |..         ||.. .+.......+..   ......+  .+..+++.+.+||.+||+.||++|||++|+++||||+..
T Consensus       194 g~~---------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          194 GYP---------PFYS-NHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             SSC---------SCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred             CCC---------CCCC-CcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence            987         7765 222211111111   1111111  224578899999999999999999999999999999864


Q ss_pred             C
Q psy9736         381 R  381 (400)
Q Consensus       381 ~  381 (400)
                      .
T Consensus       264 ~  264 (299)
T 3m2w_A          264 T  264 (299)
T ss_dssp             G
T ss_pred             c
Confidence            3

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=94.58  E-value=0.0035  Score=60.64  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=38.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      ..+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|....
T Consensus       195 ~~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          195 VVVTFWYRAPELLLGAR--------------------------HYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             --CCCTTCCHHHHTTCC--------------------------SCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             ceecCcccCchhhcCCC--------------------------cccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            35688899999998865                          46778999999999999999999997643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=94.54  E-value=0.004  Score=59.24  Aligned_cols=42  Identities=7%  Similarity=0.127  Sum_probs=36.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       246 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKP---------------------------WNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             SCTTSCCCHHHHTTCC---------------------------BSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             cCCCCCCChHHhcCCC---------------------------CCccccHHHHHHHHHHHHhCCCcccc
Confidence            4788999999998865                           66889999999999999999988754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=94.47  E-value=0.0052  Score=58.09  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=37.2

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       165 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~Pf~~  207 (337)
T 1o6l_A          165 FCGTPEYLAPEVLEDND---------------------------YGRAVDWWGLGVVMYEMMCGRLPFYN  207 (337)
T ss_dssp             CEECGGGCCGGGGSSSC---------------------------BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccChhhCChhhhcCCC---------------------------CCchhhcccchhHHHHHhcCCCCCCC
Confidence            35788899999988764                           66789999999999999999998865

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=94.45  E-value=0.005  Score=57.66  Aligned_cols=45  Identities=18%  Similarity=0.276  Sum_probs=39.0

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...||..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       176 ~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          176 SLTGTARYMSINTHLGKE---------------------------QSRRDDLEALGHMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             CCCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CcCCCccccChHHHcCCC---------------------------CCchhHHHHHHHHHHHHhcCCCCcccc
Confidence            456889999999998865                           567789999999999999999998764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=94.45  E-value=0.0042  Score=60.22  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=38.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|.++|...
T Consensus       213 ~~gt~~Y~aPE~l~~~~---------------------------~~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          213 FCGTPNYIAPEILRGED---------------------------YGFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             CCBCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             ccCCcccCCchhhcCCC---------------------------CChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            35788999999998865                           667899999999999999999999643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=94.44  E-value=0.0036  Score=58.89  Aligned_cols=42  Identities=17%  Similarity=0.161  Sum_probs=36.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          ......|+|++|+++.++++|..+|..
T Consensus       175 gt~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~  216 (328)
T 3fe3_A          175 GAPPYAAPELFQGKK--------------------------YDGPEVDVWSLGVILYTLVSGSLPFDG  216 (328)
T ss_dssp             SSGGGCCHHHHHTCC--------------------------CCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCcceeCcccccCCC--------------------------cCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            677899999998876                          334678999999999999999999865

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=94.42  E-value=0.0041  Score=57.96  Aligned_cols=43  Identities=19%  Similarity=0.326  Sum_probs=36.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       169 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          169 VVTLWYRAPDVLMGSR--------------------------TYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             CSCCTTCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccCchHhhCCC--------------------------CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3577899999998765                          466789999999999999999998865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=94.39  E-value=0.0049  Score=58.19  Aligned_cols=71  Identities=13%  Similarity=0.085  Sum_probs=49.8

Q ss_pred             CceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhh
Q psy9736         118 DNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVN  197 (400)
Q Consensus       118 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (400)
                      .++.+..-|..+..+..  ...    ....       .....+|..|+|||.+.+..                       
T Consensus       161 ~~~kl~Dfg~a~~~~~~--~~~----~~~~-------~~~~~gt~~y~aPE~~~~~~-----------------------  204 (351)
T 3mi9_A          161 GVLKLADFGLARAFSLA--KNS----QPNR-------YTNRVVTLWYRPPELLLGER-----------------------  204 (351)
T ss_dssp             SCEEECCCTTCEECCCC--SSS----SCCC-------CCSSCSCGGGCCHHHHTTCC-----------------------
T ss_pred             CCEEEccchhccccccc--ccc----cccc-------cCCcccccCccCchhhcCCC-----------------------
Confidence            35777777776655433  111    1111       12245688899999998865                       


Q ss_pred             hhhhhccccccceeeeeccccccccccccc
Q psy9736         198 YLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                         .+....|+|++|+++.++++|.++|..
T Consensus       205 ---~~~~~~DiwslG~il~ell~g~~pf~~  231 (351)
T 3mi9_A          205 ---DYGPPIDLWGAGCIMAEMWTRSPIMQG  231 (351)
T ss_dssp             ---SCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ---CCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence               467789999999999999999988865

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=94.37  E-value=0.0049  Score=57.31  Aligned_cols=44  Identities=18%  Similarity=0.331  Sum_probs=37.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|...
T Consensus       180 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~ll~g~~pf~~~  223 (311)
T 3niz_A          180 VVTLWYRAPDVLMGSK--------------------------KYSTSVDIWSIGCIFAEMITGKPLFPGV  223 (311)
T ss_dssp             CCCCTTCCHHHHTTCC--------------------------SCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccCCcCCHHHhcCCC--------------------------CCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence            3577899999998765                          4677899999999999999999988653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=94.29  E-value=0.0045  Score=56.71  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=36.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       162 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~l~~g~~pf~~  203 (288)
T 1ob3_A          162 VTLWYRAPDVLMGSK--------------------------KYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (288)
T ss_dssp             CCCTTCCHHHHTTCC--------------------------SCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCchheeCCC--------------------------CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            467799999988765                          466789999999999999999988865

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.29  E-value=0.089  Score=48.74  Aligned_cols=26  Identities=31%  Similarity=0.355  Sum_probs=23.3

Q ss_pred             CeecCCCCCCceEecCCCceEEeccc
Q psy9736         109 QVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++|+|+++.||+++.++...++||+
T Consensus       188 ~liHgDl~~~Nil~~~~~~~~lIDf~  213 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDELSGLIDFY  213 (322)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCT
T ss_pred             ccCCCCCCccCEEEeCCceEEEecch
Confidence            78999999999999877666899998

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=94.27  E-value=0.0052  Score=58.29  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=37.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       178 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~Pf~~  220 (345)
T 1xjd_A          178 FCGTPDYIAPEILLGQK---------------------------YNHSVDWWSFGVLLYEMLIGQSPFHG  220 (345)
T ss_dssp             CCSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCcccCChhhhcCCC---------------------------CCChhhhHHHHHHHHHHhcCCCCCCC
Confidence            35788899999998864                           56789999999999999999998865

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=94.27  E-value=0.0052  Score=58.49  Aligned_cols=43  Identities=19%  Similarity=0.172  Sum_probs=37.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       181 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~G~~Pf~~  223 (353)
T 2i0e_A          181 FCGTPDYIAPEIIAYQP---------------------------YGKSVDWWAFGVLLYEMLAGQAPFEG  223 (353)
T ss_dssp             CCSCGGGCCHHHHTTCC---------------------------BSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCccccChhhhcCCC---------------------------cCCcccccchHHHHHHHHcCCCCCCC
Confidence            35788999999988764                           56789999999999999999998865

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=94.21  E-value=0.0054  Score=60.70  Aligned_cols=43  Identities=19%  Similarity=0.310  Sum_probs=36.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                           |....|+|++|+++.++++|..+|.+.
T Consensus       224 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwSlG~il~ell~g~~pF~g~  266 (464)
T 3ttj_A          224 VVTRYYRAPEVILGMG---------------------------YKENVDIWSVGCIMGEMVRHKILFPGR  266 (464)
T ss_dssp             -CCCTTCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cccccccCHHHHcCCC---------------------------CCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            4678899999998865                           567899999999999999999998653

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=94.14  E-value=0.0053  Score=58.16  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=37.4

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..+|..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       170 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          170 FCGTPNYIAPEILRGED---------------------------YGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CCSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCCccccCccccCCCC---------------------------CChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            35788899999998764                           56789999999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=94.13  E-value=0.0059  Score=57.67  Aligned_cols=43  Identities=21%  Similarity=0.159  Sum_probs=36.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                          ......|+|++|+++.++++|..+|...
T Consensus       169 gt~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          169 GSPNYAAPEVINGKL--------------------------YAGPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             TSTTTSCGGGSCCSG--------------------------GGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             CCcCcCCHHHHcCCC--------------------------CCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence            677899999998865                          3456789999999999999999998653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=94.11  E-value=0.006  Score=58.58  Aligned_cols=43  Identities=21%  Similarity=0.244  Sum_probs=37.2

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       199 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~G~~Pf~~  241 (373)
T 2r5t_A          199 FCGTPEYLAPEVLHKQP---------------------------YDRTVDWWCLGAVLYEMLYGLPPFYS  241 (373)
T ss_dssp             BSCCCCCCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCccccCHHHhCCCC---------------------------CCchhhhHHHHHHHHHHHcCCCCCCC
Confidence            35788899999988764                           56789999999999999999998865

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=94.08  E-value=0.0075  Score=55.72  Aligned_cols=42  Identities=14%  Similarity=0.213  Sum_probs=36.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|.++|..
T Consensus       180 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          180 VVTLWYRAPEVLLQST---------------------------YATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             GCCCSSCCHHHHHTSC---------------------------CCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             cccccccCchHHcCCC---------------------------CCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            4578899999987764                           56789999999999999999998865

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=94.07  E-value=0.0057  Score=59.55  Aligned_cols=46  Identities=20%  Similarity=0.317  Sum_probs=37.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+....                       ..+....|+|++|++++++++|..+|..
T Consensus       230 ~gt~~Y~APE~l~~~~~~-----------------------~~~~~~~DiwSlGvilyell~G~~Pf~~  275 (410)
T 3v8s_A          230 VGTPDYISPEVLKSQGGD-----------------------GYYGRECDWWSVGVFLYEMLVGDTPFYA  275 (410)
T ss_dssp             CSCGGGCCHHHHHTTTTT-----------------------CEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCccccCHHHhhccCCC-----------------------cCCCCcceEecchHHHHHHHhCCCCCCC
Confidence            578899999998875421                       0367889999999999999999999865

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=94.02  E-value=0.0055  Score=60.27  Aligned_cols=42  Identities=21%  Similarity=0.146  Sum_probs=31.7

Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      .....+|..|+|||.+.+..                          .+....|+|++|++++++++|.
T Consensus       240 ~~~~~gt~~Y~aPE~~~~~~--------------------------~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          240 LTGHVVTRWYRAPELILLQE--------------------------NYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             -----CCCTTCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHTTS
T ss_pred             ccCCcccccccChHHhhCCC--------------------------CCCcHhHHHHHHHHHHHHHHhc
Confidence            35567899999999876554                          4778899999999999999943

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=93.95  E-value=0.0065  Score=58.26  Aligned_cols=43  Identities=23%  Similarity=0.409  Sum_probs=37.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       202 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~  244 (383)
T 3eb0_A          202 ICSRFYRAPELMLGAT--------------------------EYTPSIDLWSIGCVFGELILGKPLFSG  244 (383)
T ss_dssp             CCCSSCCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCccCHHHhcCCC--------------------------CCCcchhhhhHHHHHHHHHhCCCCCCC
Confidence            3577799999998866                          467889999999999999999998865

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=93.93  E-value=0.0067  Score=57.28  Aligned_cols=43  Identities=19%  Similarity=0.402  Sum_probs=36.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       192 ~gt~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~ell~g~~pf~~  234 (360)
T 3e3p_A          192 ICSRYYRAPELIFGNQ--------------------------HYTTAVDIWSVGCIFAEMMLGEPIFRG  234 (360)
T ss_dssp             TSCGGGCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCcceeCHHHHcCCC--------------------------CCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence            3577899999987765                          467789999999999999999988865

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=93.87  E-value=0.0063  Score=56.87  Aligned_cols=42  Identities=14%  Similarity=0.237  Sum_probs=35.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       162 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~l~~g~~pf~~  203 (324)
T 3mtl_A          162 VTLWYRPPDILLGST--------------------------DYSTQIDMWGVGCIFYEMATGRPLFPG  203 (324)
T ss_dssp             -CGGGCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcccccChhhhcCCC--------------------------CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            577799999998865                          466789999999999999999988865

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.84  E-value=0.12  Score=48.18  Aligned_cols=27  Identities=22%  Similarity=0.394  Sum_probs=23.8

Q ss_pred             CCeecCCCCCCceEecCC----CceEEeccc
Q psy9736         108 NQVIHRDIKSDNILLGLD----GSVKLSKWN  134 (400)
Q Consensus       108 ~~ivH~dikp~nil~~~~----~~~~l~dfg  134 (400)
                      ..++|+|+.+.||+++.+    +.+.++||+
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~  213 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQ  213 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCC
Confidence            378999999999999874    678999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=93.83  E-value=0.0061  Score=57.97  Aligned_cols=91  Identities=13%  Similarity=0.090  Sum_probs=58.4

Q ss_pred             HHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCC
Q psy9736         100 QALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEP  175 (400)
Q Consensus       100 ~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~  175 (400)
                      .....+|.    .+|.-..-...++.+.+-|..+...-+  ..   .......     ......+|..|+|||.+.+.. 
T Consensus       169 H~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~--~~---~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-  237 (364)
T 3op5_A          169 HEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPE--GV---HKAYAAD-----PKRCHDGTIEFTSIDAHNGVA-  237 (364)
T ss_dssp             HHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGG--GC---CCCSSCC-----SSCCCCCCTTTCCHHHHTTCC-
T ss_pred             HHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccC--Cc---ccccccC-----cccccCCCCCccCHHHhCCCC-
Confidence            34455663    255433223456777777777654322  11   0001000     112356889999999998865 


Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                +....|+|++|+++.++++|..+|..
T Consensus       238 --------------------------~~~~~Di~slG~~l~el~~g~~Pf~~  263 (364)
T 3op5_A          238 --------------------------PSRRGDLEILGYCMIQWLTGHLPWED  263 (364)
T ss_dssp             --------------------------CCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             --------------------------CCchhhHHHHHHHHHHHHhCCCCccc
Confidence                                      56788999999999999999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=93.82  E-value=0.01  Score=57.19  Aligned_cols=46  Identities=17%  Similarity=0.222  Sum_probs=37.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.+....                        .+....|+|++|++++++++|..+|...
T Consensus       175 ~gt~~Y~aPE~~~~~~~~------------------------~~~~~~DiwSlG~il~elltG~~Pf~~~  220 (384)
T 4fr4_A          175 AGTKPYMAPEMFSSRKGA------------------------GYSFAVDWWSLGVTAYELLRGRRPYHIR  220 (384)
T ss_dssp             CSCGGGCCGGGTCCCSSC------------------------CBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             CCCccccCCeeeccCCCC------------------------CCCccceeechHHHHHHHHhCCCCCCCC
Confidence            478889999998764311                        3677899999999999999999998643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=93.82  E-value=0.0072  Score=57.62  Aligned_cols=42  Identities=21%  Similarity=0.222  Sum_probs=36.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|++++++++|.++|..
T Consensus       191 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~~ll~g~~Pf~~  232 (362)
T 2bdw_A          191 AGTPGYLSPEVLKKDP---------------------------YSKPVDIWACGVILYILLVGYPPFWD  232 (362)
T ss_dssp             CSCTTTCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCccccCHHHHccCC---------------------------CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            4678899999987754                           56778999999999999999998864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=93.79  E-value=0.0063  Score=56.15  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       177 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~  218 (297)
T 3fxz_A          177 VGTPYWMAPEVVTRKA---------------------------YGPKVDIWSLGIMAIEMIEGEPPYLN  218 (297)
T ss_dssp             CSCGGGCCHHHHHCSC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCcCccChhhhcCCC---------------------------CCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            4678899999988765                           56789999999999999999998864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=93.77  E-value=0.0068  Score=59.53  Aligned_cols=43  Identities=19%  Similarity=0.269  Sum_probs=36.7

Q ss_pred             cccceeeehhhccC----CCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTG----MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+    ..                          .+....|+|++|+++.++++|.++|..
T Consensus       237 ~GT~~Y~APE~l~~~~~~~~--------------------------~~~~~~DvwSlGvil~elltG~~Pf~~  283 (437)
T 4aw2_A          237 VGTPDYISPEILQAMEGGKG--------------------------RYGPECDWWSLGVCMYEMLYGETPFYA  283 (437)
T ss_dssp             CSCGGGCCHHHHHHHHTSCC--------------------------EECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCcCeeChHHHhhcccCCC--------------------------CCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence            47889999999873    33                          577889999999999999999999865

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=93.74  E-value=0.0068  Score=55.48  Aligned_cols=181  Identities=13%  Similarity=0.129  Sum_probs=97.8

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHHHHHHHHHHH-HhCCCCCcccccce-----eEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKELIINEILVM-RENKHPNIVNYLDS-----YLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~~~~~-----~~~~~~~~lv~e~~~   73 (400)
                      ++.|.++.+.. ..+..++.|+..+....... .. .+ +.+..+ ..-.++++..+...     ...+-.-.-+.+++.
T Consensus        21 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-~~-e~-~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~   97 (298)
T 1csn_A           21 GSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL-RD-EY-RTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD   97 (298)
T ss_dssp             CSSCEEEEEEETTTTEEEEEEEEECCTTSCCH-HH-HH-HHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHH
T ss_pred             cCCEEEEEEEECCCCcEEEEEEeccCCccHHH-HH-HH-HHHHHHhcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHH
Confidence            57888888874 67788889988766554432 22 22 344444 77777777765431     111000001112221


Q ss_pred             --CC--ChHHHHhhcCCCHHHHHHHHHHH--HHHHHHHHh----CCeec-CC--CCCCceEecCCCceEEeccchhhhhh
Q psy9736          74 --GG--SLTDVVTETCMDEGQIAAVCREV--LQALEFLHS----NQVIH-RD--IKSDNILLGLDGSVKLSKWNRFIATK  140 (400)
Q Consensus        74 --~~--~L~~~i~~~~l~~~~~~~i~~qi--~~~l~~lH~----~~ivH-~d--ikp~nil~~~~~~~~l~dfg~~~~~~  140 (400)
                        +.  +.....       ..+..++..+  +......|.    .+|.- .+  -....+.+..-|..+..+-.  ....
T Consensus        98 ~~~~~~~~~~~~-------~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~  168 (298)
T 1csn_A           98 LCGRKFSVKTVA-------MAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP--VTKQ  168 (298)
T ss_dssp             HTTTCCCHHHHH-------HHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT--TTCC
T ss_pred             HhccCCCHHHHH-------HHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc--cccc
Confidence              11  222221       1122222222  333445563    24432 21  12223777777776655432  1110


Q ss_pred             hccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc
Q psy9736         141 LYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV  220 (400)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  220 (400)
                      .. ...       ......+|..|+|||.+.+..                           +....|+|++|+++.++++
T Consensus       169 ~~-~~~-------~~~~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~  213 (298)
T 1csn_A          169 HI-PYR-------EKKNLSGTARYMSINTHLGRE---------------------------QSRRDDLEALGHVFMYFLR  213 (298)
T ss_dssp             BC-CCC-------CCCCCCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             cc-ccc-------CccCCCCCcccCCchhhcCCC---------------------------CChHHHHHHHHHHHHHHHc
Confidence            00 000       123456889999999988865                           4567899999999999999


Q ss_pred             cccccccC
Q psy9736         221 GEELWYTK  228 (400)
Q Consensus       221 ~~~~~~~~  228 (400)
                      |..+|...
T Consensus       214 g~~pf~~~  221 (298)
T 1csn_A          214 GSLPWQGL  221 (298)
T ss_dssp             SSCTTSSC
T ss_pred             CCCCcchh
Confidence            99988763

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=93.72  E-value=0.0068  Score=61.28  Aligned_cols=43  Identities=16%  Similarity=0.156  Sum_probs=37.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.+..                           +....|+|++|++++++++|.++|...
T Consensus       350 ~GT~~Y~APE~l~~~~---------------------------~~~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          350 AGTPGFMAPELLLGEE---------------------------YDFSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             CSCTTTSCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             cCCccccChhhhcCCC---------------------------CChHHhcCcchHHHHHHHhCCCCCCCC
Confidence            5788899999998864                           667899999999999999999998764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=93.72  E-value=0.018  Score=53.10  Aligned_cols=45  Identities=13%  Similarity=0.012  Sum_probs=37.6

Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ....+|..|+|||.+.+..                           +....|+|++|+++.++++|..++..
T Consensus       180 ~~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          180 YTVVGNPYWMAPEMINGRS---------------------------YDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             CCCCSCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             cccCCCcceeCHHHhcCCC---------------------------CCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            3567899999999998864                           55778999999999999999876643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=93.71  E-value=0.0074  Score=57.63  Aligned_cols=64  Identities=14%  Similarity=0.037  Sum_probs=47.4

Q ss_pred             ceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhh
Q psy9736         119 NILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNY  198 (400)
Q Consensus       119 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (400)
                      ++.+..-|..+..+-+  ...     .           ...||..|+|||.+.+..                        
T Consensus       157 ~vkl~DFG~a~~~~~~--~~~-----~-----------~~~gt~~y~aPE~~~~~~------------------------  194 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDG--VEF-----K-----------NIFGTPEFVAPEIVNYEP------------------------  194 (361)
T ss_dssp             CEEECCCSSCEECCTT--CCC-----C-----------CCCSCGGGCCHHHHTTCC------------------------
T ss_pred             CEEEEecCCceEcCCC--Ccc-----c-----------cCCCCccEECchHHcCCC------------------------
Confidence            6777777776654433  111     0           124688899999987754                        


Q ss_pred             hhhhccccccceeeeeccccccccccccc
Q psy9736         199 LDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                         +....|+|++|++++++++|.++|..
T Consensus       195 ---~~~~~DiwslGvil~~ll~g~~Pf~~  220 (361)
T 2yab_A          195 ---LGLEADMWSIGVITYILLSGASPFLG  220 (361)
T ss_dssp             ---CCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             ---CCccccHHHHHHHHHHHHhCCCCCCC
Confidence               56788999999999999999999865

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=93.68  E-value=0.011  Score=54.06  Aligned_cols=46  Identities=17%  Similarity=0.268  Sum_probs=38.7

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      ...++..|+|||.+.+..                           +....|+|++|+++.++++|..+|....
T Consensus       174 ~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          174 NLTGTARYASINTHLGIE---------------------------QSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CCCSCGGGCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccCCCccccchHHhcCCC---------------------------CCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            456788999999998865                           4567899999999999999999987643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=93.67  E-value=0.0082  Score=62.36  Aligned_cols=83  Identities=19%  Similarity=0.211  Sum_probs=56.1

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|.-.  .-.++.+.+-|..+.....  ...     .          ....||..|+|||.+.+..
T Consensus       458 LH~~gIiHrDLKp~NILl~--~~g~ikL~DFGla~~~~~~--~~~-----~----------~~~~GT~~Y~APE~l~~~~  518 (674)
T 3pfq_A          458 LQSKGIIYRDLKLDNVMLD--SEGHIKIADFGMCKENIWD--GVT-----T----------KTFCGTPDYIAPEIIAYQP  518 (674)
T ss_dssp             HHHTSEECCCCCSTTEEEC--SSSCEEECCCTTCEECCCT--TCC-----B----------CCCCSCSSSCCHHHHTCCC
T ss_pred             HHhCCeEeccCChhhEEEc--CCCcEEEeecceeeccccC--Ccc-----c----------ccccCCCcccCHhhhcCCC
Confidence            344455663    244421  1235777777776653322  111     1          1245789999999998765


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                 |....|+|++|++++++++|.++|..
T Consensus       519 ---------------------------~~~~~DvwSlGvilyelltG~~Pf~~  544 (674)
T 3pfq_A          519 ---------------------------YGKSVDWWAFGVLLYEMLAGQAPFEG  544 (674)
T ss_dssp             ---------------------------BSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------------------CCccceEechHHHHHHHHcCCCCCCC
Confidence                                       67889999999999999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=93.66  E-value=0.0072  Score=56.54  Aligned_cols=70  Identities=20%  Similarity=0.208  Sum_probs=49.1

Q ss_pred             CceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhh
Q psy9736         118 DNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVN  197 (400)
Q Consensus       118 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (400)
                      .++.+..-|..+..+.+  .    ......         ...+|..|+|||.+.+..                       
T Consensus       142 ~~~kl~Dfg~a~~~~~~--~----~~~~~~---------~~~gt~~y~aPE~~~~~~-----------------------  183 (323)
T 3tki_A          142 DNLKISDFGLATVFRYN--N----RERLLN---------KMCGTLPYVAPELLKRRE-----------------------  183 (323)
T ss_dssp             CCEEECCCTTCEECEET--T----EECCBC---------SCCSCGGGSCHHHHHCSS-----------------------
T ss_pred             CCEEEEEeeccceeccC--C----cccccC---------CCccCcCccCcHHhccCC-----------------------
Confidence            45777777776655433  1    111111         135788899999998876                       


Q ss_pred             hhhhhccccccceeeeecccccccccccccC
Q psy9736         198 YLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                         .+....|+|++|+++.++++|..+|...
T Consensus       184 ---~~~~~~DiwslG~il~~ll~g~~pf~~~  211 (323)
T 3tki_A          184 ---FHAEPVDVWSCGIVLTAMLAGELPWDQP  211 (323)
T ss_dssp             ---BCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             ---CCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence               3456789999999999999999998653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=93.65  E-value=0.0036  Score=59.57  Aligned_cols=42  Identities=21%  Similarity=0.237  Sum_probs=35.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+.                           .+....|+|++|++++++++|..+|..
T Consensus       185 ~gt~~y~aPE~~~~~---------------------------~~~~~~DiwslG~il~ell~G~~Pf~~  226 (353)
T 3txo_A          185 CGTPDYIAPEILQEM---------------------------LYGPAVDWWAMGVLLYEMLCGHAPFEA  226 (353)
T ss_dssp             -CCGGGCCHHHHHHH---------------------------HCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcCeEChhhcCCC---------------------------CcCCccCCCcchHHHHHHHhCCCCCCC
Confidence            578889999997664                           367789999999999999999999865

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=93.59  E-value=0.0071  Score=56.65  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=35.8

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       199 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~  240 (329)
T 3gbz_A          199 ITLWYRPPEILLGSR--------------------------HYSTSVDIWSIACIWAEMLMKTPLFPG  240 (329)
T ss_dssp             -CCTTCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCccccCHHHhcCCC--------------------------CCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            467799999998865                          467789999999999999999998865

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=93.58  E-value=0.0074  Score=57.39  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=37.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|...
T Consensus       192 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~~  235 (364)
T 3qyz_A          192 VATRWYRAPEIMLNSK--------------------------GYTKSIDIWSVGCILAEMLSNRPIFPGK  235 (364)
T ss_dssp             CSCGGGCCHHHHHTBC--------------------------SCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccccCCCCCHHhcCCC--------------------------CCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence            5788899999876654                          4667889999999999999999988653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=93.57  E-value=0.0078  Score=58.85  Aligned_cols=47  Identities=17%  Similarity=0.099  Sum_probs=36.4

Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .....+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       208 ~~~~~gt~~Y~APE~~~~~~--------------------------~~~~~~DiwSlG~il~ell~g~~p~~~  254 (432)
T 3n9x_A          208 LTSHVVTRWYRAPELILLQE--------------------------NYTKSIDIWSTGCIFAELLNMLQSHIN  254 (432)
T ss_dssp             ---CCCCCTTCCHHHHTTCS--------------------------CCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred             ccCCCCCccccCHHHHhcCC--------------------------CCCcccccchHHHHHHHHHhccccccc
Confidence            35667899999999976554                          577889999999999999997665543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=93.56  E-value=0.0087  Score=58.89  Aligned_cols=42  Identities=24%  Similarity=0.211  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           +....|+|++|++++++++|.++|..
T Consensus       174 ~gt~~Y~APE~l~~~~---------------------------~~~~~DIwSlGvilyell~G~~Pf~~  215 (444)
T 3soa_A          174 AGTPGYLSPEVLRKDP---------------------------YGKPVDLWACGVILYILLVGYPPFWD  215 (444)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCCcccCCHHHhcCCC---------------------------CCCccccHHHHHHHHHHHhCCCCCCC
Confidence            4788899999987764                           56788999999999999999998854

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=93.51  E-value=0.01  Score=54.14  Aligned_cols=45  Identities=18%  Similarity=0.278  Sum_probs=38.3

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...++..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       174 ~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          174 NLTGTARYASINTHLGIE---------------------------QSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccccccCChhhhcCCC---------------------------CCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            456888999999998865                           456789999999999999999998763

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=93.50  E-value=0.0096  Score=57.11  Aligned_cols=46  Identities=7%  Similarity=-0.050  Sum_probs=38.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..+|..|+|||.+.+...                         .+....|+|++|+++.++++|..+|...
T Consensus       195 ~~gt~~y~aPE~~~~~~~-------------------------~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          195 SVKVLPWLSPEVLQQNLQ-------------------------GYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             CTTTGGGSCHHHHSTTSS-------------------------CBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccccccCHHHHhccCC-------------------------CCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            367888999999987421                         4667899999999999999999998653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=93.49  E-value=0.0084  Score=55.13  Aligned_cols=42  Identities=21%  Similarity=0.199  Sum_probs=35.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       173 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~ll~g~~pf~~  214 (294)
T 4eqm_A          173 LGTVQYFSPEQAKGEA---------------------------TDECTDIYSIGIVLYEMLVGEPPFNG  214 (294)
T ss_dssp             --CCSSCCHHHHHTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             ccCccccCHhHhcCCC---------------------------CCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            4678899999988865                           45678999999999999999998865

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=93.41  E-value=0.17  Score=46.06  Aligned_cols=24  Identities=29%  Similarity=0.324  Sum_probs=20.0

Q ss_pred             CeecCCCCCCceEecCCCceEEecc
Q psy9736         109 QVIHRDIKSDNILLGLDGSVKLSKW  133 (400)
Q Consensus       109 ~ivH~dikp~nil~~~~~~~~l~df  133 (400)
                      .++|+|+.+.|++++.++. .+.|-
T Consensus       189 ~LvHGDlw~gNvl~~~~g~-~~iDp  212 (288)
T 3f7w_A          189 ARIHGDLWNGNVLWQDDGA-VVIDP  212 (288)
T ss_dssp             EEECSCCSGGGEEEETTEE-EECSC
T ss_pred             eeeecCCCCCcEEEcCCCe-EEEec
Confidence            6899999999999998874 46563

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=93.33  E-value=0.0092  Score=57.02  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=36.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       191 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          191 ATRWYRAPEIMLNWM--------------------------HYNQTVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             CCCTTCCHHHHTTCC--------------------------SCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCcCccChHHHcCCc--------------------------CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            466799999988755                          467889999999999999999998865

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=93.29  E-value=0.01  Score=60.37  Aligned_cols=127  Identities=11%  Similarity=0.052  Sum_probs=83.3

Q ss_pred             HHHHHHHHHhhc-CCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC-----------------Cccccc
Q psy9736         179 LIINEILVMREN-KHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS-----------------NTTDEK  240 (400)
Q Consensus       179 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~~~~  240 (400)
                      .+.+|+..++.+ .|+|++.+++........|-+|+.+...-.........+.++..                 ..+|+|
T Consensus       287 ~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIK  366 (569)
T 4azs_A          287 ELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVR  366 (569)
T ss_dssp             HHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCC
T ss_pred             HHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCc
Confidence            468899999998 68999999999999999999999886443333332233332222                 347999


Q ss_pred             ccc---CCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         241 TST---SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       241 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                      +.|   +..+.+|.+|||++...........+.+||+.|||||++.+.. ...+|.|+.|++.|++.++
T Consensus       367 PeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~-~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          367 PWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENK-SWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             GGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             hHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCCC-CCcccccccccchhhhccc
Confidence            988   5779999999999888777777788899999999999998753 3457888888877777655

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=93.26  E-value=0.0094  Score=56.90  Aligned_cols=43  Identities=16%  Similarity=0.285  Sum_probs=36.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|..
T Consensus       186 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          186 VVTRWYRAPEVILNWM--------------------------RYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             CSCGGGCCTHHHHTTT--------------------------CCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCCcCCHHHHhCCC--------------------------CCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence            3567799999988754                          467889999999999999999999865

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=93.24  E-value=0.0097  Score=56.36  Aligned_cols=42  Identities=19%  Similarity=0.157  Sum_probs=36.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       194 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~~ll~g~~pf~~  235 (351)
T 3c0i_A          194 VGTPHFMAPEVVKREP---------------------------YGKPVDVWGCGVILFILLSGCLPFYG  235 (351)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             cCCcCccCHHHHcCCC---------------------------CCchHhhHHHHHHHHHHHHCCCCCCC
Confidence            4688899999988754                           56788999999999999999988865

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=93.24  E-value=0.0084  Score=56.56  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|..
T Consensus       173 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          173 VVTRWYRAPELLFGAR--------------------------MYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             CCCCTTCCHHHHTTCS--------------------------CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccCchHhhCCC--------------------------CCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            3577899999988765                          466788999999999999999988765

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=93.21  E-value=0.0077  Score=58.64  Aligned_cols=50  Identities=14%  Similarity=0.185  Sum_probs=37.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.+....                    .....+....|+|++|++++++++|..+|...
T Consensus       224 ~Gt~~Y~APE~l~~~~~~--------------------~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  273 (412)
T 2vd5_A          224 VGTPDYLSPEILQAVGGG--------------------PGTGSYGPECDWWALGVFAYEMFYGQTPFYAD  273 (412)
T ss_dssp             CSCGGGCCHHHHHHHHTC--------------------TTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ccccCcCCHHHHhhcccC--------------------cCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence            478889999998731000                    00015778899999999999999999998653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=93.21  E-value=0.012  Score=56.98  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=34.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                           +....|+|++|++++++++|..+|...
T Consensus       224 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          224 CYTPYYVAPEVLGPEK---------------------------YDKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             ---CTTCCGGGSCCCC---------------------------SSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             CCCCCccCHhhcCCCC---------------------------CCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence            3577899999987654                           667899999999999999999998653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=93.16  E-value=0.015  Score=54.26  Aligned_cols=48  Identities=10%  Similarity=-0.060  Sum_probs=37.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+.....                      ..+....|+|++|+++.++++|..+|...
T Consensus       194 ~gt~~y~aPE~~~~~~~~~----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          194 VGTRRYMAPEVLEGAINFQ----------------------RDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             CCCGGGCCHHHHTTCCCCC----------------------HHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             ccCccccCHhhcccccccC----------------------cCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            5788899999998753211                      14556789999999999999999988753

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=93.14  E-value=0.01  Score=58.24  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=37.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       309 ~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~Pf~~  351 (446)
T 4ejn_A          309 FCGTPEYLAPEVLEDND---------------------------YGRAVDWWGLGVVMYEMMCGRLPFYN  351 (446)
T ss_dssp             SSSCGGGCCHHHHHTSC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCccccCHhhcCCCC---------------------------CCCccchhhhHHHHHHHhhCCCCCCC
Confidence            35788999999987764                           66789999999999999999998865

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=93.13  E-value=0.0092  Score=56.26  Aligned_cols=90  Identities=12%  Similarity=0.111  Sum_probs=56.9

Q ss_pred             HHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCc
Q psy9736         101 ALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPK  176 (400)
Q Consensus       101 ~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~  176 (400)
                      .....|.    .+|.-..=...++.+..-|..+..+-+  ... ......       ......++..|+|||.+.+..  
T Consensus       169 ~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~--~~~-~~~~~~-------~~~~~~gt~~y~aPE~~~~~~--  236 (345)
T 2v62_A          169 ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPN--GNH-KQYQEN-------PRKGHNGTIEFTSLDAHKGVA--  236 (345)
T ss_dssp             HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGG--GCC-CCCCCC-------GGGCSCSCTTTCCHHHHHTCC--
T ss_pred             hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccc--ccc-ccchhc-------cccccCCCccccCHHHhcCCC--
Confidence            3445663    245432222237778777777654322  110 000000       112356888999999988864  


Q ss_pred             hHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         177 KELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                               +....|+|++|+++.++++|..+|..
T Consensus       237 -------------------------~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          237 -------------------------LSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             -------------------------CCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             -------------------------CCchhhHHHHHHHHHHHHhCCCCccc
Confidence                                     56788999999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=92.92  E-value=0.011  Score=55.72  Aligned_cols=46  Identities=13%  Similarity=0.210  Sum_probs=38.4

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|...
T Consensus       181 ~~~gt~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~pf~~~  226 (353)
T 2b9h_A          181 EFVATRWYRAPEVMLTSA--------------------------KYSRAMDVWSCGCILAELFLRRPIFPGR  226 (353)
T ss_dssp             CCCCCGGGCCHHHHHSCC--------------------------CCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             hccccccccCCeeeccCC--------------------------CccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            456889999999876644                          4667899999999999999999988653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=92.92  E-value=0.011  Score=56.30  Aligned_cols=41  Identities=22%  Similarity=0.368  Sum_probs=34.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       188 gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~el~~g~~pf~~  228 (371)
T 2xrw_A          188 VTRYYRAPEVILGMG---------------------------YKENVDIWSVGCIMGEMIKGGVLFPG  228 (371)
T ss_dssp             --CTTCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecCCccCHHHhcCCC---------------------------CCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            567799999998854                           56789999999999999999998865

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=92.88  E-value=0.012  Score=54.99  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       164 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~  205 (318)
T 1fot_A          164 CGTPDYIAPEVVSTKP---------------------------YNKSIDWWSFGILIYEMLAGYTPFYD  205 (318)
T ss_dssp             CSCTTTCCHHHHTTCC---------------------------BCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCccccCHhHhcCCC---------------------------CCcccchhhhHHHHHHHHhCCCCCCC
Confidence            3678899999988764                           56789999999999999999998865

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=92.87  E-value=0.012  Score=55.12  Aligned_cols=42  Identities=24%  Similarity=0.334  Sum_probs=36.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       186 ~t~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~pf~~  227 (331)
T 4aaa_A          186 ATRWYRAPELLVGDV--------------------------KYGKAVDVWAIGCLVTEMFMGEPLFPG  227 (331)
T ss_dssp             CCCTTCCHHHHTTCT--------------------------TCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCccccCcccccCCC--------------------------CcchHHHHHHHHHHHHHHHhCCCCCCC
Confidence            567799999998865                          466789999999999999999988865

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=92.85  E-value=0.01  Score=54.78  Aligned_cols=42  Identities=24%  Similarity=0.349  Sum_probs=34.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       164 ~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~p~~~  205 (311)
T 4agu_A          164 ATRWYRSPELLVGDT--------------------------QYGPPVDVWAIGCVFAELLSGVPLWPG  205 (311)
T ss_dssp             --GGGCCHHHHHTCS--------------------------CCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCccccChHHHhcCC--------------------------CCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            467799999998765                          466789999999999999999988865

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=92.79  E-value=0.012  Score=55.08  Aligned_cols=66  Identities=12%  Similarity=0.054  Sum_probs=49.2

Q ss_pred             CCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchh
Q psy9736         117 SDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIV  196 (400)
Q Consensus       117 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
                      ..++.+..-|..+..+.+  ...    .            ...+|..|+|||.+.+..                      
T Consensus       154 ~~~~kl~Dfg~a~~~~~~--~~~----~------------~~~gt~~y~aPE~~~~~~----------------------  193 (326)
T 2y0a_A          154 KPRIKIIDFGLAHKIDFG--NEF----K------------NIFGTPEFVAPEIVNYEP----------------------  193 (326)
T ss_dssp             SCCEEECCCTTCEECCTT--SCC----C------------CCCSCTTTCCHHHHTTCC----------------------
T ss_pred             CCCEEEEECCCCeECCCC--Ccc----c------------cccCCcCcCCceeecCCC----------------------
Confidence            346788888877776654  111    0            124678899999987754                      


Q ss_pred             hhhhhhccccccceeeeeccccccccccccc
Q psy9736         197 NYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                           +....|+|++|+++.++++|..+|..
T Consensus       194 -----~~~~~DiwslG~il~~ll~g~~pf~~  219 (326)
T 2y0a_A          194 -----LGLEADMWSIGVITYILLSGASPFLG  219 (326)
T ss_dssp             -----CCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             -----CCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence                 56778999999999999999988854

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=92.78  E-value=0.013  Score=53.64  Aligned_cols=41  Identities=10%  Similarity=0.123  Sum_probs=34.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..++
T Consensus       162 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~l~~~~~p~  202 (292)
T 3o0g_A          162 VVTLWYRPPDVLFGAK--------------------------LYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_dssp             CSCGGGCCHHHHTTCS--------------------------CCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred             ccccCCcChHHHcCCC--------------------------CcCchHHHHHHHHHHHHHHHcCCCC
Confidence            4577899999998865                          4678899999999999999887664

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=92.76  E-value=0.01  Score=57.14  Aligned_cols=53  Identities=13%  Similarity=0.156  Sum_probs=36.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+......                -......+....|+|++|+++.++++|..+|..
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~----------------~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  269 (390)
T 2zmd_A          217 VGAVNYMPPEAIKDMSSSRE----------------NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  269 (390)
T ss_dssp             CCCGGGCCHHHHHCC----------------------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcCCCccChHHhhhcccccc----------------ccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence            47888999999876421100                000001467789999999999999999998854

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=92.74  E-value=0.012  Score=55.08  Aligned_cols=42  Identities=14%  Similarity=0.134  Sum_probs=36.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       182 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~el~~g~~pf~~  223 (327)
T 3a62_A          182 CGTIEYMAPEILMRSG---------------------------HNRAVDWWSLGALMYDMLTGAPPFTG  223 (327)
T ss_dssp             SSCCTTSCHHHHTTSC---------------------------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCcCccCHhhCcCCC---------------------------CCCcccchhHHHHHHHHHHCCCCCCC
Confidence            4678899999987754                           56788999999999999999998865

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=92.73  E-value=0.0096  Score=53.50  Aligned_cols=44  Identities=11%  Similarity=0.144  Sum_probs=34.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+....                        .+....|+|++|+++.++++|..+|..
T Consensus       170 ~t~~y~aPE~~~~~~~~------------------------~~~~~~Di~slG~il~el~~g~~p~~~  213 (271)
T 3kmu_A          170 YAPAWVAPEALQKKPED------------------------TNRRSADMWSFAVLLWELVTREVPFAD  213 (271)
T ss_dssp             SCGGGSCHHHHHSCGGG------------------------SCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred             CCccccChhhhccCCCC------------------------CCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            35679999998876421                        233468999999999999999988864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=92.69  E-value=0.01  Score=54.96  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=34.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       180 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~ll~g~~pf~~  221 (311)
T 3ork_A          180 IGTAQYLSPEQARGDS---------------------------VDARSDVYSLGCVLYEVLTGEPPFTG  221 (311)
T ss_dssp             --CCTTCCHHHHHTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcCcccCCHHHhcCCC---------------------------CCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            4678899999988765                           45678999999999999999988865

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=92.67  E-value=0.0094  Score=56.77  Aligned_cols=44  Identities=20%  Similarity=0.097  Sum_probs=33.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                          ......|+|++|+++.++++|..+|...
T Consensus       178 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (361)
T 3uc3_A          178 VGTPAYIAPEVLLRQE--------------------------YDGKIADVWSCGVTLYVMLVGAYPFEDP  221 (361)
T ss_dssp             ---CTTSCHHHHHCSS--------------------------CCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred             cCCCCcCChhhhcCCC--------------------------CCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence            3678899999998866                          2334479999999999999999998753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=92.65  E-value=0.013  Score=56.07  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=36.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++|.++|...
T Consensus       220 ~t~~y~aPE~~~~~~---------------------------~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          220 QSRFYRSPEVLLGMP---------------------------YDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             SCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCccccChHHHcCCC---------------------------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            466799999998865                           567889999999999999999998753

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=92.63  E-value=0.012  Score=54.57  Aligned_cols=42  Identities=12%  Similarity=0.026  Sum_probs=34.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       200 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~elltg~~Pf~~  241 (309)
T 3p86_A          200 AGTPEWMAPEVLRDEP---------------------------SNEKSDVYSFGVILWELATLQQPWGN  241 (309)
T ss_dssp             --CCTTSCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             CCCccccChhhhcCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3677899999998865                           45678999999999999999988865

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=92.62  E-value=0.015  Score=55.03  Aligned_cols=42  Identities=21%  Similarity=0.337  Sum_probs=36.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       220 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          220 INTRQYRAPEVILNLG---------------------------WDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCcccccCcHHHcCCC---------------------------CCCccchHHHHHHHHHHHHCCCCCCC
Confidence            4678899999998765                           56788999999999999999998865

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=92.60  E-value=0.015  Score=54.29  Aligned_cols=42  Identities=14%  Similarity=0.278  Sum_probs=35.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       202 ~gt~~y~aPE~~~~~~---------------------------~~~~~Dv~slG~il~el~~g~~pf~~  243 (321)
T 2c30_A          202 VGTPYWMAPEVISRSL---------------------------YATEVDIWSLGIMVIEMVDGEPPYFS  243 (321)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCccccCHhhhcCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4678899999987754                           55678999999999999999988864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=92.58  E-value=0.012  Score=55.37  Aligned_cols=43  Identities=19%  Similarity=0.162  Sum_probs=36.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       190 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          190 CGTIEYCAPEVLMGNP--------------------------YRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             CSCGGGCCHHHHTTCC--------------------------BCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             CCCccccChhhhcCCC--------------------------CCCCcccchhHHHHHHHHHhCCCchhh
Confidence            3678899999998876                          335678999999999999999988854

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=92.55  E-value=0.013  Score=56.55  Aligned_cols=83  Identities=11%  Similarity=0.083  Sum_probs=54.2

Q ss_pred             HHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCC
Q psy9736         100 QALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEP  175 (400)
Q Consensus       100 ~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~  175 (400)
                      ......|.    .+|.-..-...++.+..-|..+..+-+  .   . ...            ..+|..|+|||.+.+.. 
T Consensus       166 H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~---~-~~~------------~~gt~~y~aPE~~~~~~-  226 (387)
T 1kob_A          166 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--E---I-VKV------------TTATAEFAAPEIVDREP-  226 (387)
T ss_dssp             HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--S---C-EEE------------ECSSGGGCCHHHHTTCC-
T ss_pred             HhCCeeecccchHHeEEecCCCCceEEEecccceecCCC--c---c-eee------------eccCCCccCchhccCCC-
Confidence            33445663    255432223456777777766654322  0   0 011            13577899999988754 


Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                +....|+|++|+++.++++|..+|..
T Consensus       227 --------------------------~~~~~DiwSlG~il~elltg~~Pf~~  252 (387)
T 1kob_A          227 --------------------------VGFYTDMWAIGVLGYVLLSGLSPFAG  252 (387)
T ss_dssp             --------------------------BCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             --------------------------CCCcccEeeHhHHHHHHHhCCCCCCC
Confidence                                      45678999999999999999998865

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=92.53  E-value=0.017  Score=52.05  Aligned_cols=43  Identities=23%  Similarity=0.234  Sum_probs=36.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       168 ~~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~p~~~  210 (276)
T 2yex_A          168 CGTLPYVAPELLKRRE--------------------------FHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (276)
T ss_dssp             CSCGGGCCGGGGTCSS--------------------------BCHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ccccCccChHHHhcCC--------------------------CCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            4677899999988765                          335678999999999999999988865

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=92.43  E-value=0.011  Score=55.20  Aligned_cols=83  Identities=14%  Similarity=0.147  Sum_probs=53.5

Q ss_pred             HHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCC
Q psy9736         100 QALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEP  175 (400)
Q Consensus       100 ~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~  175 (400)
                      ......|.    .+|.-.+-...++.+..-|..+..+-+  .    ....            ..+|..|+|||.+.+.. 
T Consensus       119 H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~----~~~~------------~~gt~~y~aPE~~~~~~-  179 (321)
T 1tki_A          119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--D----NFRL------------LFTAPEYYAPEVHQHDV-  179 (321)
T ss_dssp             HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--C----EEEE------------EESCGGGSCHHHHTTCE-
T ss_pred             HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--C----cccc------------ccCChhhcCcHHhcCCC-
Confidence            34445563    255433222456777777766654433  1    1111            13466799999987753 


Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                +....|+|++|+++.++++|..+|..
T Consensus       180 --------------------------~~~~~DiwslG~il~~ll~g~~pf~~  205 (321)
T 1tki_A          180 --------------------------VSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             --------------------------ECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             --------------------------CCchhhHHHHHHHHHHHHhCCCCCcC
Confidence                                      56778999999999999999998865

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=92.42  E-value=0.015  Score=55.42  Aligned_cols=65  Identities=17%  Similarity=0.221  Sum_probs=50.2

Q ss_pred             CceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccc
Q psy9736         126 GSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVG  205 (400)
Q Consensus       126 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (400)
                      ..++|+|||  .+......          .....+|..|+|||.+.+..                           +...
T Consensus       233 ~~~kl~DfG--~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~---------------------------~~~~  273 (397)
T 1wak_A          233 LKVKIADLG--NACWVHKH----------FTEDIQTRQYRSLEVLIGSG---------------------------YNTP  273 (397)
T ss_dssp             CCEEECCGG--GCEETTBC----------SCSCCSCGGGCCHHHHHTSC---------------------------CCTH
T ss_pred             cceEecccc--cccccccc----------CccCCCCCcccCChhhcCCC---------------------------CCcH
Confidence            479999999  54433221          23346899999999998864                           5567


Q ss_pred             cccceeeeecccccccccccccCC
Q psy9736         206 EELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       206 ~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      .|+|++|+++.++++|..+|....
T Consensus       274 ~DiwslG~il~elltg~~pf~~~~  297 (397)
T 1wak_A          274 ADIWSTACMAFELATGDYLFEPHS  297 (397)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCc
Confidence            899999999999999999987543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=92.41  E-value=0.014  Score=55.32  Aligned_cols=41  Identities=24%  Similarity=0.308  Sum_probs=34.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       212 gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~pf~~  252 (349)
T 2w4o_A          212 GTPGYCAPEILRGCA---------------------------YGPEVDMWSVGIITYILLCGFEPFYD  252 (349)
T ss_dssp             -CGGGSCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCCCccCHHHhcCCC---------------------------CCcccchHHHHHHHHHHHhCCCCCCC
Confidence            577899999988764                           56778999999999999999988754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=92.36  E-value=0.012  Score=55.09  Aligned_cols=42  Identities=21%  Similarity=0.226  Sum_probs=23.8

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       171 ~t~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          171 FTLHYAAPELLNQNG---------------------------YDESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             -------------CC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             CCcCccCHHHhcCCC---------------------------CCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            577899999987764                           556789999999999999999998753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=92.33  E-value=0.014  Score=55.08  Aligned_cols=45  Identities=11%  Similarity=0.129  Sum_probs=38.2

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ...++..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       227 ~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          227 PHEGDLEFISMDLHKGCG---------------------------PSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             TTCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             cccCCccccCHHHHccCC---------------------------CCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            346788999999998865                           556899999999999999999888763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=92.32  E-value=0.019  Score=54.37  Aligned_cols=44  Identities=14%  Similarity=0.200  Sum_probs=35.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+...                         .+....|+|++|+++.++++|..+|..
T Consensus       221 ~gt~~y~aPE~~~~~~~-------------------------~~~~~~DvwslG~il~ell~g~~pf~~  264 (355)
T 1vzo_A          221 CGTIEYMAPDIVRGGDS-------------------------GHDKAVDWWSLGVLMYELLTGASPFTV  264 (355)
T ss_dssp             GSCCTTCCHHHHTTCC----------------------------CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred             ccCcCccChhhhcCCCC-------------------------CCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence            36788999999987431                         356788999999999999999988865

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=92.30  E-value=0.016  Score=57.46  Aligned_cols=41  Identities=24%  Similarity=0.328  Sum_probs=35.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+                            .+....|+|++|++++++++|.++|..
T Consensus       184 ~gt~~y~aPE~~~~----------------------------~~~~~~DiwslG~il~~ll~g~~pf~~  224 (486)
T 3mwu_A          184 IGTAYYIAPEVLRG----------------------------TYDEKCDVWSAGVILYILLSGTPPFYG  224 (486)
T ss_dssp             TTGGGGCCGGGGGS----------------------------CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCCCCCHHHhCC----------------------------CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            36778999999876                            345678999999999999999999865

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=92.29  E-value=0.015  Score=54.42  Aligned_cols=44  Identities=20%  Similarity=0.191  Sum_probs=36.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+...                         .+....|+|++|+++.++++|..+|..
T Consensus       235 ~gt~~y~aPE~~~~~~~-------------------------~~~~~~DiwslG~il~el~~g~~pf~~  278 (345)
T 3hko_A          235 AGTPYFVAPEVLNTTNE-------------------------SYGPKCDAWSAGVLLHLLLMGAVPFPG  278 (345)
T ss_dssp             CCCGGGCCHHHHTCSSS-------------------------CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCccccCchhhccCCC-------------------------CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            47888999999876321                         466789999999999999999998865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=92.26  E-value=0.016  Score=55.01  Aligned_cols=42  Identities=12%  Similarity=0.124  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       199 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ell~g~~Pf~~  240 (350)
T 1rdq_E          199 CGTPEALAPEIILSKG---------------------------YNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             EECGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCccccCHHHhcCCC---------------------------CCCcCCEecccHhHhHHhhCCCCCCC
Confidence            3677899999988764                           56789999999999999999998865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=92.20  E-value=0.014  Score=59.46  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=37.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.+..                           +....|+|++|++++++++|.++|...
T Consensus       346 ~GT~~Y~APEvl~~~~---------------------------~~~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          346 VGTVGYMAPEVVKNER---------------------------YTFSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             CSCGGGCCHHHHTTCE---------------------------ESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             CCCccccCHHHHcCCC---------------------------CCccchHHHHHHHHHHHHhCCCCCccc
Confidence            4788899999988753                           667889999999999999999998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=92.19  E-value=0.014  Score=57.01  Aligned_cols=43  Identities=23%  Similarity=0.333  Sum_probs=36.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|.++|...
T Consensus       260 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          260 IQSRFYRAPEVILGAR---------------------------YGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CSCGGGCCHHHHHTBC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCCCccChHHHhCCC---------------------------CCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            3567799999998864                           567889999999999999999888653

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=92.09  E-value=0.019  Score=52.80  Aligned_cols=41  Identities=22%  Similarity=0.238  Sum_probs=35.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       169 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  209 (304)
T 2jam_A          169 GTPGYVAPEVLAQKP---------------------------YSKAVDCWSIGVITYILLCGYPPFYE  209 (304)
T ss_dssp             SCCCBCCTTTBSSCS---------------------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCccChHHhccCC---------------------------CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            467799999987754                           55789999999999999999988865

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=92.02  E-value=0.015  Score=57.59  Aligned_cols=40  Identities=23%  Similarity=0.243  Sum_probs=34.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+                            .+....|+|++|++++++++|.++|..
T Consensus       190 gt~~y~aPE~~~~----------------------------~~~~~~DiwslG~il~~ll~g~~pf~~  229 (484)
T 3nyv_A          190 GTAYYIAPEVLHG----------------------------TYDEKCDVWSTGVILYILLSGCPPFNG  229 (484)
T ss_dssp             TGGGTCCHHHHHT----------------------------CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCccccCceeecC----------------------------CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence            5778999999876                            345678999999999999999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=91.95  E-value=0.012  Score=55.07  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       216 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ell~~g~~p~~~  257 (325)
T 3kul_A          216 IPIRWTAPEAIAFRT---------------------------FSSASDVWSFGVVMWEVLAYGERPYWN  257 (325)
T ss_dssp             CCGGGSCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcccccCHhHhcCCC---------------------------CCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence            456799999987653                           5667899999999999998 8877744

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=91.94  E-value=0.019  Score=53.62  Aligned_cols=42  Identities=17%  Similarity=0.092  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       194 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~~ll~g~~pf~~  235 (327)
T 3lm5_A          194 MGTPEYLAPEILNYDP---------------------------ITTATDMWNIGIIAYMLLTHTSPFVG  235 (327)
T ss_dssp             CCCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCcCccCCeeecCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3677899999987765                           55678999999999999999988854

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=91.93  E-value=0.018  Score=54.38  Aligned_cols=42  Identities=12%  Similarity=0.188  Sum_probs=35.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       195 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~l~~g~~pf~~  236 (362)
T 3pg1_A          195 THRWYRAPELVMQFK--------------------------GFTKLVDMWSAGCVMAEMFNRKALFRG  236 (362)
T ss_dssp             -CGGGCCHHHHTTCT--------------------------TCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccceecCcHHhcCCC--------------------------CCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence            456799999988755                          466788999999999999999988865

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=91.88  E-value=0.019  Score=53.40  Aligned_cols=42  Identities=14%  Similarity=0.113  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       179 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  220 (321)
T 2a2a_A          179 FGTPEFVAPEIVNYEP---------------------------LGLEADMWSIGVITYILLSGASPFLG  220 (321)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCccCcccccCCC---------------------------CCCccccHHHHHHHHHHHHCCCCCCC
Confidence            4678899999987754                           55678999999999999999988854

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=91.86  E-value=0.0083  Score=56.74  Aligned_cols=42  Identities=17%  Similarity=0.230  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+.                           .+....|+|++|++++++++|..+|..
T Consensus       181 ~gt~~y~aPE~~~~~---------------------------~~~~~~DiwslG~il~ell~g~~Pf~~  222 (342)
T 2qr7_A          181 CYTANFVAPEVLERQ---------------------------GYDAACDIWSLGVLLYTMLTGYTPFAN  222 (342)
T ss_dssp             SCCSSCCCHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CCCccccCHHHhcCC---------------------------CCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence            357889999997653                           366789999999999999999998865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=91.80  E-value=0.016  Score=55.47  Aligned_cols=42  Identities=12%  Similarity=0.038  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       249 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~elltg~~pf~~  290 (373)
T 2x4f_A          249 FGTPEFLAPEVVNYDF---------------------------VSFPTDMWSVGVIAYMLLSGLSPFLG  290 (373)
T ss_dssp             CSSCTTCCHHHHTTCB---------------------------CCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCcEeChhhccCCC---------------------------CCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            3678899999987653                           55678999999999999999998865

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=91.76  E-value=0.02  Score=52.55  Aligned_cols=45  Identities=13%  Similarity=0.154  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+....                        .+....|+|++|+++.++++|..+|..
T Consensus       198 ~gt~~y~aPE~~~~~~~~------------------------~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          198 VGTPAFMAPESLSETRKI------------------------FSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             CSCGGGCCGGGCCTTCCC------------------------EESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCccccChhhhccCCCC------------------------CCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            367889999998875411                        235668999999999999999988854

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=91.75  E-value=0.019  Score=55.78  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=33.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+....                        .+....|+|++|+++.++++|..+|..
T Consensus       302 ~gt~~y~aPE~~~~~~~~------------------------~~~~~~DiwslG~il~~lltg~~pf~~  346 (419)
T 3i6u_A          302 CGTPTYLAPEVLVSVGTA------------------------GYNRAVDCWSLGVILFICLSGYPPFSE  346 (419)
T ss_dssp             ---CTTCCTTTTC----C------------------------TTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCccCceeeecCCCC------------------------CCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            467889999998753211                        466789999999999999999998865

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=91.73  E-value=0.021  Score=51.85  Aligned_cols=42  Identities=21%  Similarity=0.222  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       168 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~l~~g~~pf~~  209 (284)
T 3kk8_A          168 AGTPGYLSPEVLKKDP---------------------------YSKPVDIWACGVILYILLVGYPPFWD  209 (284)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcCCcCchhhcCCC---------------------------CCcccchHHHHHHHHHHHHCCCCCCC
Confidence            4677899999988765                           45678999999999999999988754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=91.72  E-value=0.017  Score=57.40  Aligned_cols=43  Identities=19%  Similarity=0.156  Sum_probs=36.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          ......|+|++|+++.++++|..+|..
T Consensus       176 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwSlGvil~elltG~~Pf~~  218 (476)
T 2y94_A          176 CGSPNYAAPEVISGRL--------------------------YAGPEVDIWSSGVILYALLCGTLPFDD  218 (476)
T ss_dssp             CSCSTTCCHHHHTTCC--------------------------BCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcCeEChhhccCCC--------------------------CCCCcceehhhHHHHHHHhhCCCCCCC
Confidence            3678899999998876                          335678999999999999999988864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=91.68  E-value=0.013  Score=55.19  Aligned_cols=53  Identities=13%  Similarity=0.146  Sum_probs=35.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+......                .......+....|+|++|+++.++++|..+|..
T Consensus       170 ~gt~~y~aPE~~~~~~~~~~----------------~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          170 VGTVNYMPPEAIKDMSSSRE----------------NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             CCCCSSCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCcCcCCHHHHhhcccccc----------------ccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            47888999999876321100                000002567789999999999999999988854

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=91.64  E-value=0.023  Score=52.91  Aligned_cols=51  Identities=12%  Similarity=0.074  Sum_probs=37.4

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ...+|..|+|||.+.+......                    ...+....|+|++|+++.++++|..++..
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~--------------------~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRD--------------------XESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGG--------------------HHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cCCCccceeCchhhcCCccccc--------------------ccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            3468899999999987432110                    01466788999999999999999665543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=91.61  E-value=0.003  Score=63.91  Aligned_cols=104  Identities=11%  Similarity=-0.083  Sum_probs=63.3

Q ss_pred             HHHHHHHHhhcCCCchhhhhhhhccccccceeeeecc-ccccccccc-----c------cCCCCCCCCccccccccC--C
Q psy9736         180 IINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD-SYLVGEELW-----Y------TKPIEEPSNTTDEKTSTS--S  245 (400)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~-----~------~~~~~~~~~~~~~~~~~~--~  245 (400)
                      ..+|+..++.++|+|++.........+..|-+++.+. ..|......     .      ..-....-..+|+++.|.  .
T Consensus       386 ~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~  465 (540)
T 3en9_A          386 TAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD  465 (540)
T ss_dssp             HHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES
T ss_pred             HHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC
Confidence            5789999999999999955444445556666665553 111111000     0      000001123457777661  2


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-------CCccCCCCccCCCcceec
Q psy9736         246 ASPLSTPPLSLIQPPPPSTPP-------RSTLNGALTSLPPPVVLD  284 (400)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~  284 (400)
                      . .++..|||...........       .++.+||+.|||||++..
T Consensus       466 ~-~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          466 K-DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             S-SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             C-eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            2 9999999998766543221       246789999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=91.59  E-value=0.02  Score=57.00  Aligned_cols=180  Identities=14%  Similarity=0.148  Sum_probs=94.5

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHHHHHHHHHHHHh-CCCCCcccc----------cceeEeCCEEEEE
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNY----------LDSYLVGEELWVV   68 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~----------~~~~~~~~~~~lv   68 (400)
                      ++.|.++.+.. ..+..++.|+.-+............+   +..++. -..+.+.-+          .+++  ++.+.-+
T Consensus        18 G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i---l~~L~~~~~i~~i~~~~~~~~~~~lvme~~--g~sL~~l   92 (483)
T 3sv0_A           18 GSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKI---YRILQGGTGIPNVRWFGVEGDYNVLVMDLL--GPSLEDL   92 (483)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHH---HHHTTTSTTCCCEEEEEEETTEEEEEEECC--CCBHHHH
T ss_pred             CCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHH---HHHhcCCCCCCeEEEEEeeCCEEEEEEECC--CCCHHHH
Confidence            57898888874 67888899987766555543333333   333332 222222211          1111  1111111


Q ss_pred             EeccCC-CChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHh----CCeecC-CCCCCceEecCCCceEEeccchhhhhh
Q psy9736          69 MEYLPG-GSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHS----NQVIHR-DIKSDNILLGLDGSVKLSKWNRFIATK  140 (400)
Q Consensus        69 ~e~~~~-~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~----~~ivH~-dikp~nil~~~~~~~~l~dfg~~~~~~  140 (400)
                      +..+.+ .+....+       ..+..++..  .+....++|.    .+|+-. +-...++.+.+-|..+..+-.  ... 
T Consensus        93 l~~~~~~l~~~~~~-------~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~--~~~-  162 (483)
T 3sv0_A           93 FNFCSRKLSLKTVL-------MLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT--STH-  162 (483)
T ss_dssp             HHHTTTCCCHHHHH-------HHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT--TTC-
T ss_pred             HHhhcCCCCHHHHH-------HHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC--ccc-
Confidence            112211 1222221       112222222  2334455663    245431 123445777777776654432  111 


Q ss_pred             hccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc
Q psy9736         141 LYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV  220 (400)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  220 (400)
                      ......       ......+|..|+|||.+.+..                           +....|+|++|+++.++++
T Consensus       163 ~~~~~~-------~~~~~~gt~~Y~aPE~~~~~~---------------------------~s~~sDvwSlGvil~ellt  208 (483)
T 3sv0_A          163 QHIPYR-------ENKNLTGTARYASVNTHLGIE---------------------------QSRRDDLESLGYVLMYFLR  208 (483)
T ss_dssp             CBCCCC-------CCCCCCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred             cccccc-------cccccCCCccccCHHHhcCCC---------------------------CChHHHHHHHHHHHHHHHh
Confidence            000000       113456889999999998875                           4567899999999999999


Q ss_pred             cccccccCC
Q psy9736         221 GEELWYTKP  229 (400)
Q Consensus       221 ~~~~~~~~~  229 (400)
                      |..+|....
T Consensus       209 G~~Pf~~~~  217 (483)
T 3sv0_A          209 GSLPWQGLK  217 (483)
T ss_dssp             SSCTTSSCC
T ss_pred             CCCCCcccc
Confidence            999987643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=91.48  E-value=0.02  Score=53.30  Aligned_cols=43  Identities=14%  Similarity=0.311  Sum_probs=35.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       191 ~~~~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~~ll~g~~p~~~  233 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQ--------------------------MYDYSLDMWSLGCMLASMIFRKEPFFH  233 (330)
T ss_dssp             CSCGGGCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cccccccChhhhcCCC--------------------------cCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            3566799999988755                          466789999999999999999988743

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=91.47  E-value=0.022  Score=53.37  Aligned_cols=65  Identities=20%  Similarity=0.241  Sum_probs=48.0

Q ss_pred             CCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCch
Q psy9736         116 KSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNI  195 (400)
Q Consensus       116 kp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
                      ....+.+..-|..+..+-.  ..                  ...+|..|+|||.+.+..                     
T Consensus       177 ~~~~~kl~Dfg~~~~~~~~--~~------------------~~~gt~~y~aPE~~~~~~---------------------  215 (355)
T 2eu9_A          177 KNTSIRVADFGSATFDHEH--HT------------------TIVATRHYRPPEVILELG---------------------  215 (355)
T ss_dssp             SCCCEEECCCTTCEETTSC--CC------------------SSCSCGGGCCHHHHTTCC---------------------
T ss_pred             CCCcEEEeecCcccccccc--cc------------------CCcCCCcccCCeeeecCC---------------------
Confidence            4456777777766654322  10                  124678899999998764                     


Q ss_pred             hhhhhhhccccccceeeeeccccccccccccc
Q psy9736         196 VNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                            +....|+|++|+++.++++|..+|..
T Consensus       216 ------~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          216 ------WAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             ------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------CCCccchHHHHHHHHHHHhCCCCCCC
Confidence                  55678999999999999999998865

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=91.44  E-value=0.019  Score=57.04  Aligned_cols=41  Identities=22%  Similarity=0.169  Sum_probs=35.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+                            .+....|+|++|++++++++|.++|..
T Consensus       199 ~gt~~y~aPE~l~~----------------------------~~~~~~DiwslG~il~~ll~g~~pf~~  239 (494)
T 3lij_A          199 LGTAYYIAPEVLRK----------------------------KYDEKCDVWSIGVILFILLAGYPPFGG  239 (494)
T ss_dssp             CSCTTTCCHHHHTT----------------------------CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcCeeCHHHHcc----------------------------cCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence            46788999999764                            356788999999999999999999865

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=91.41  E-value=0.024  Score=54.08  Aligned_cols=41  Identities=12%  Similarity=0.135  Sum_probs=34.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       267 ~t~~y~aPE~~~~~~---------------------------~~~~~DvwslG~il~ellt~g~~p~~~  308 (370)
T 2psq_A          267 LPVKWMAPEALFDRV---------------------------YTHQSDVWSFGVLMWEIFTLGGSPYPG  308 (370)
T ss_dssp             SCGGGCCHHHHHTCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cccceECHhHhcCCC---------------------------CCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            466799999988764                           5677899999999999999 8888765

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=91.35  E-value=0.028  Score=51.08  Aligned_cols=42  Identities=19%  Similarity=0.156  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       173 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKT---------------------------HDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCCcCCHHHhccCC---------------------------CCcccchhhHHHHHHHHHHCCCCCCC
Confidence            3577899999988764                           45688999999999999999988864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=91.32  E-value=0.02  Score=52.81  Aligned_cols=43  Identities=14%  Similarity=0.220  Sum_probs=35.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       185 ~~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~el~~g~~pf~~  227 (320)
T 2i6l_A          185 LVTKWYRSPRLLLSPN--------------------------NYTKAIDMWAAGCIFAEMLTGKTLFAG  227 (320)
T ss_dssp             GSCCTTCCHHHHHCTT--------------------------CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccCcHHhcCcc--------------------------cCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence            3567799999987654                          466788999999999999999988865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=91.28  E-value=0.025  Score=51.72  Aligned_cols=44  Identities=11%  Similarity=-0.083  Sum_probs=33.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ..+|..|+|||.+.+....+.                     ..+....|+|++|+++.++++|.
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~---------------------~~~~~~~DvwslG~il~el~tg~  220 (301)
T 3q4u_A          177 RVGTKRYMAPEVLDETIQVDC---------------------FDSYKRVDIWAFGLVLWEVARRM  220 (301)
T ss_dssp             CCCCGGGCCHHHHTTCCCTTC---------------------HHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             cccccceeChhhhcCcCCCCc---------------------ccCCchhhHHHHHHHHHHHHhhh
Confidence            357889999999988642100                     02446789999999999999993

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=91.27  E-value=0.015  Score=54.07  Aligned_cols=42  Identities=14%  Similarity=0.118  Sum_probs=34.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       210 gt~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~el~~g~~pf~~  251 (320)
T 3a99_A          210 GTRVYSPPEWIRYHR--------------------------YHGRSAAVWSLGILLYDMVCGDIPFEH  251 (320)
T ss_dssp             SCGGGSCHHHHHHSC--------------------------BCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CCccCCChHHhccCC--------------------------CCCccchHHhHHHHHHHHHHCCCCCCC
Confidence            577899999987765                          345678999999999999999988754

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=91.27  E-value=0.36  Score=46.17  Aligned_cols=111  Identities=15%  Similarity=0.165  Sum_probs=64.1

Q ss_pred             EEEEeccccccCcchHHHHHHHHHHHHhCCCCC-cccccceeEeCCEEEEEEeccCCCChHH----------HH----h-
Q psy9736          19 SKILSNPITLAQQPKKELIINEILVMRENKHPN-IVNYLDSYLVGEELWVVMEYLPGGSLTD----------VV----T-   82 (400)
Q Consensus        19 ~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~~~L~~----------~i----~-   82 (400)
                      .+++++.-- ..........+|..+++.+...+ ..++++.+.+    .+|+||++|.++..          .+    . 
T Consensus        83 ~~~vlR~~g-~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~  157 (379)
T 3feg_A           83 REVLLRLYG-AILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQ  157 (379)
T ss_dssp             SEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHH
T ss_pred             CeEEEEECC-CccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHH
Confidence            456666632 21123455668999998874322 3556655542    28999998755431          01    0 


Q ss_pred             --hc--C----C--CHHHHHHHHHHHHH-------------------HHHHHHh--------CCeecCCCCCCceEecCC
Q psy9736          83 --ET--C----M--DEGQIAAVCREVLQ-------------------ALEFLHS--------NQVIHRDIKSDNILLGLD  125 (400)
Q Consensus        83 --~~--~----l--~~~~~~~i~~qi~~-------------------~l~~lH~--------~~ivH~dikp~nil~~~~  125 (400)
                        .-  .    .  -...+..+..++-.                   .+..|.+        ..++|+|+.+.||+++.+
T Consensus       158 LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~  237 (379)
T 3feg_A          158 FHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSE  237 (379)
T ss_dssp             HHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESC
T ss_pred             HhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCC
Confidence              00  1    1  13445555544321                   1233321        267899999999999876


Q ss_pred             ----CceEEeccc
Q psy9736         126 ----GSVKLSKWN  134 (400)
Q Consensus       126 ----~~~~l~dfg  134 (400)
                          +.+.++||.
T Consensus       238 ~~~~~~~~~IDwE  250 (379)
T 3feg_A          238 PENADSLMLVDFE  250 (379)
T ss_dssp             C---CCEEECCCT
T ss_pred             CCccCcEEEEecc
Confidence                789999997

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=91.25  E-value=0.025  Score=51.10  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=21.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       174 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  214 (278)
T 3cok_A          174 GTPNYISPEIATRSA---------------------------HGLESDVWSLGCMFYTLLIGRPPFDT  214 (278)
T ss_dssp             ---------------------------------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCcCCcchhcCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            567799999987653                           45678999999999999999988865

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=91.20  E-value=0.024  Score=52.62  Aligned_cols=42  Identities=24%  Similarity=0.315  Sum_probs=35.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       195 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          195 VSTRHYRAPEVILALG---------------------------WSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             CSCGGGCCHHHHTTSC---------------------------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCCccccChHHhhCCC---------------------------CCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            4677899999988764                           55678999999999999999988865

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=91.15  E-value=0.014  Score=54.25  Aligned_cols=41  Identities=10%  Similarity=-0.031  Sum_probs=35.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|.
T Consensus       196 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          196 RGTIGHIAPEYLSTGK---------------------------SSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CSCGGGCCHHHHHHSE---------------------------ECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cCCcCccCHHHhccCC---------------------------CCccccchhHHHHHHHHHhCCCccc
Confidence            3678899999986653                           5667899999999999999999885

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=91.14  E-value=0.022  Score=53.61  Aligned_cols=43  Identities=14%  Similarity=0.153  Sum_probs=35.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++ |..+|...
T Consensus       256 ~~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRV---------------------------YTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             EECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CCCceeEChhhhcCCC---------------------------CCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence            3567799999987654                           5678999999999999998 98888653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=91.10  E-value=0.028  Score=52.96  Aligned_cols=43  Identities=21%  Similarity=0.305  Sum_probs=36.4

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|...
T Consensus       185 ~t~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          185 VTRWYRAPEVILSWM--------------------------HYNQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             CSBCCSCHHHHSCCS--------------------------CCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             cCcCcCCHHHHhCcC--------------------------CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            467799999988754                          4667899999999999999999988753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=91.07  E-value=0.025  Score=52.36  Aligned_cols=38  Identities=21%  Similarity=0.169  Sum_probs=31.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      +|..|+|||.+.+                            .+....|+|++|+++.++++|...+
T Consensus       218 gt~~y~aPE~~~~----------------------------~~~~~~DiwslG~il~el~~g~~~~  255 (311)
T 3p1a_A          218 GDPRYMAPELLQG----------------------------SYGTAADVFSLGLTILEVACNMELP  255 (311)
T ss_dssp             CCGGGCCGGGGGT----------------------------CCSTHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCccccCHhHhcC----------------------------CCCchhhHHHHHHHHHHHHhCCCCC
Confidence            6788999999877                            2456789999999999999996543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=91.07  E-value=0.021  Score=54.05  Aligned_cols=42  Identities=17%  Similarity=0.355  Sum_probs=34.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       197 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~g~~pf~~~  238 (373)
T 1q8y_A          197 QTREYRSPEVLLGAP---------------------------WGCGADIWSTACLIFELITGDFLFEPD  238 (373)
T ss_dssp             SCGGGCCHHHHHTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             CCccccCcHHHhCCC---------------------------CCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            467899999998764                           557789999999999999999988753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=91.04  E-value=0.018  Score=51.85  Aligned_cols=41  Identities=20%  Similarity=0.256  Sum_probs=34.4

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       176 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          176 GAYAWMAPEVIRASM---------------------------FSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             CCGGGSCHHHHHHCC---------------------------CSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             CccceeCHHHhccCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            466799999987754                           45678999999999999999988865

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=90.98  E-value=0.045  Score=51.99  Aligned_cols=43  Identities=7%  Similarity=-0.039  Sum_probs=35.0

Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      |..|+|||.+.+...                         .+....|+|++|+++.++++|..+|...
T Consensus       254 t~~y~aPE~~~~~~~-------------------------~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          254 PVTYAPREFLNASTA-------------------------TFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             CGGGCCHHHHTCSEE-------------------------ECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             CcCCcChhhccCCCC-------------------------CcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            356999999976210                         4678899999999999999999998764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=90.98  E-value=0.031  Score=51.67  Aligned_cols=42  Identities=14%  Similarity=0.146  Sum_probs=33.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       196 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  237 (309)
T 2h34_A          196 VGTLYYMAPERFSESH---------------------------ATYRADIYALTCVLYECLTGSPPYQG  237 (309)
T ss_dssp             -CCGGGCCGGGTCC-------------------------------CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CCCcCccCHHHHcCCC---------------------------CCchHhHHHHHHHHHHHHHCCCCCCC
Confidence            3677899999987753                           56789999999999999999988865

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=90.95  E-value=0.025  Score=52.45  Aligned_cols=50  Identities=14%  Similarity=0.092  Sum_probs=35.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      +|..|+|||.+.+.....                   ..-..+....|+|++|+++.++++|..+|...
T Consensus       177 gt~~y~aPE~~~~~~~~~-------------------~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          177 GTEEYLHPDMYERAVLRK-------------------DHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             SCGGGCCHHHHHHHTSCC-------------------CCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             cCCCccCHHHhhhccccc-------------------cccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            577899999976310000                   00014677899999999999999999998753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=90.94  E-value=0.024  Score=53.53  Aligned_cols=41  Identities=22%  Similarity=0.288  Sum_probs=35.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       192 gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          192 GTRSYMSPERLQGTH---------------------------YSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             CCCTTCCHHHHTTCC---------------------------CSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             CCCCeECHHHHcCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            467799999988764                           55678999999999999999988865

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=90.94  E-value=0.024  Score=54.02  Aligned_cols=42  Identities=19%  Similarity=0.287  Sum_probs=36.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      +|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       203 ~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~il~el~~g~~pf~~  244 (371)
T 4exu_A          203 VTRWYRAPEVILSWM--------------------------HYNQTVDIWSVGCIMAEMLTGKTLFKG  244 (371)
T ss_dssp             CCCTTSCHHHHSCCS--------------------------CCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cCccccCHHHhcCCC--------------------------CCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            467799999998754                          466789999999999999999998865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=90.91  E-value=0.019  Score=53.30  Aligned_cols=43  Identities=9%  Similarity=-0.058  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|...
T Consensus       202 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          202 KGTLGYIDPEYFIKGR---------------------------LTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             EEETTTCCHHHHHHCB---------------------------CCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CCCccccCHHHhcCCC---------------------------CCcccchHhHHHHHHHHHhCCCccccc
Confidence            4677899999986643                           567789999999999999999887653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=90.91  E-value=0.025  Score=52.41  Aligned_cols=41  Identities=17%  Similarity=0.240  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       201 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ell~~g~~p~~~  242 (323)
T 3qup_A          201 LPVKWLALESLADNL---------------------------YTVHSDVWAFGVTMWEIMTRGQTPYAG  242 (323)
T ss_dssp             CCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcccccCchhhcCCC---------------------------CCCccchhhHHHHHHHHHhCCCCCccc
Confidence            356699999987754                           5567899999999999999 8877754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=90.88  E-value=0.031  Score=54.63  Aligned_cols=46  Identities=9%  Similarity=-0.024  Sum_probs=35.1

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ..+|..|+|||.+.+....                        .+....|+|++|+++.++++ |..+|..
T Consensus       186 ~~gt~~y~APE~l~~~~~~------------------------~~t~~~DiwSlG~il~ellt~g~~pf~~  232 (432)
T 3p23_A          186 VPGTEGWIAPEMLSEDCKE------------------------NPTYTVDIFSAGCVFYYVISEGSHPFGK  232 (432)
T ss_dssp             CCSCTTSCCGGGTSCC---------------------------CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred             cCCCcCccChhhhhccccc------------------------CCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence            3578899999998763210                        34567899999999999999 8877753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=90.85  E-value=0.02  Score=52.80  Aligned_cols=49  Identities=18%  Similarity=0.215  Sum_probs=37.8

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..+|..|+|||.+.+....                      ...+....|+|++|+++.++++|..+|...
T Consensus       181 ~~gt~~y~aPE~~~~~~~~----------------------~~~~~~~~DiwslG~il~~l~~g~~pf~~~  229 (316)
T 2ac3_A          181 PCGSAEYMAPEVVEAFSEE----------------------ASIYDKRCDLWSLGVILYILLSGYPPFVGR  229 (316)
T ss_dssp             -CCSGGGCCHHHHHHTSHH----------------------HHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             ccCCcCccChHHhhccccc----------------------ccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence            4578899999998653210                      114678899999999999999999988763

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=90.85  E-value=0.027  Score=51.73  Aligned_cols=42  Identities=17%  Similarity=0.144  Sum_probs=34.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .++..|+|||.+.+                            .+....|+|++|+++.++++|..+|...
T Consensus       196 ~g~~~y~aPE~~~~----------------------------~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          196 VGTTAYMAPEALRG----------------------------EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             CSCGGGCCHHHHTT----------------------------EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             CCCcCcCChHHhcC----------------------------CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence            46788999998765                            2456789999999999999999888653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=90.83  E-value=0.029  Score=51.15  Aligned_cols=40  Identities=10%  Similarity=0.033  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+                            .+....|+|++|+++.++++|..+|..
T Consensus       192 ~t~~y~aPE~~~~----------------------------~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          192 GTPEFMAPEMYEE----------------------------KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             SSCCCCCGGGGGT----------------------------CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCcCcCCHHHHhc----------------------------cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            5678999998765                            345678999999999999999988754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=90.82  E-value=0.027  Score=52.18  Aligned_cols=41  Identities=17%  Similarity=0.219  Sum_probs=34.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       181 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  221 (326)
T 1blx_A          181 VTLWYRAPEVLLQSS---------------------------YATPVDLWSVGCIFAEMFRRKPLFRG  221 (326)
T ss_dssp             CCCTTCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccceeCHHHHhcCC---------------------------CCcchhHHHHHHHHHHHHcCCCCCCC
Confidence            567799999987754                           45678999999999999999998865

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=90.82  E-value=0.026  Score=55.14  Aligned_cols=78  Identities=10%  Similarity=0.014  Sum_probs=46.8

Q ss_pred             CCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchh
Q psy9736         117 SDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIV  196 (400)
Q Consensus       117 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
                      ..++.+..-|..+..+.+  ... .....          ....+|..|+|||.+.+....                    
T Consensus       164 ~~~~kL~DFG~a~~~~~~--~~~-~~~~~----------~~~~gt~~y~aPE~~~~~~~~--------------------  210 (434)
T 2rio_A          164 NLRILISDFGLCKKLDSG--QSS-FRTNL----------NNPSGTSGWRAPELLEESNNL--------------------  210 (434)
T ss_dssp             SCEEEECCCTTCEECCC---------------------------CCTTSCHHHHSCCCTT--------------------
T ss_pred             ceEEEEcccccceecCCC--Ccc-ceeee----------cCCCCCCCccCHHHhcccccc--------------------
Confidence            346777777877766544  111 11111          123578889999999773200                    


Q ss_pred             hhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         197 NYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .....+....|+|++|+++.++++ |..+|..
T Consensus       211 ~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          211 QTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             SCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             ccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            000146788999999999999999 8888754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=90.78  E-value=0.023  Score=53.03  Aligned_cols=41  Identities=15%  Similarity=0.176  Sum_probs=34.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       181 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~  222 (327)
T 3poz_A          181 VPIKWMALESILHRI---------------------------YTHQSDVWSYGVTVWELMTFGSKPYDG  222 (327)
T ss_dssp             CCGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccccccChHHhccCC---------------------------CCchhhhhhhHHHHHHHHhcCCCCccC
Confidence            456799999988764                           5677899999999999999 8888865

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=90.77  E-value=0.024  Score=54.04  Aligned_cols=41  Identities=10%  Similarity=0.044  Sum_probs=34.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       248 ~t~~y~aPE~~~~~~---------------------------~~~~~DvwslG~il~ellt~g~~pf~~  289 (367)
T 3l9p_A          248 LPVKWMPPEAFMEGI---------------------------FTSKTDTWSFGVLLWEIFSLGYMPYPS  289 (367)
T ss_dssp             SCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CcccEECHHHhcCCC---------------------------CCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            466799999987654                           5677899999999999998 8888765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=90.68  E-value=0.025  Score=56.33  Aligned_cols=41  Identities=17%  Similarity=0.141  Sum_probs=34.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+                            .+....|+|++|+++.++++|.++|..
T Consensus       209 ~gt~~y~aPE~~~~----------------------------~~~~~~DiwslG~il~~ll~g~~pf~~  249 (504)
T 3q5i_A          209 LGTAYYIAPEVLKK----------------------------KYNEKCDVWSCGVIMYILLCGYPPFGG  249 (504)
T ss_dssp             CSCTTTCCHHHHTT----------------------------CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCcCCCCHHHhcc----------------------------CCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            36788999999765                            356778999999999999999999865

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=90.66  E-value=0.027  Score=50.86  Aligned_cols=41  Identities=15%  Similarity=0.168  Sum_probs=34.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+                            .+....|+|++|+++.++++|..+|..
T Consensus       169 ~~t~~y~aPE~~~~----------------------------~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (277)
T 3f3z_A          169 VGTPYYVSPQVLEG----------------------------LYGPECDEWSAGVMMYVLLCGYPPFSA  209 (277)
T ss_dssp             CSCTTTCCHHHHTT----------------------------CBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCccChHHhcc----------------------------cCCchhhehhHHHHHHHHHHCCCCCCC
Confidence            35778999999766                            345678999999999999999988865

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=90.61  E-value=0.031  Score=50.60  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=35.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       168 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  209 (279)
T 3fdn_A          168 CGTLDYLPPEMIEGRM---------------------------HDEKVDLWSLGVLCYEFLVGKPPFEA  209 (279)
T ss_dssp             CCCCTTCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCCCCccCHhHhccCC---------------------------CCccchhHhHHHHHHHHHHCCCCCCC
Confidence            3567899999988764                           45678999999999999999988864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=90.56  E-value=0.036  Score=51.93  Aligned_cols=43  Identities=14%  Similarity=0.096  Sum_probs=35.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhcc-ccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ++..|+|||.+.+..                          .+.. ..|+|++|+++.++++|..+|...
T Consensus       212 ~~~~y~aPE~~~~~~--------------------------~~~~~~~Di~slG~il~~l~~g~~pf~~~  255 (348)
T 2pml_X          212 GTYEFMPPEFFSNES--------------------------SYNGAKVDIWSLGICLYVMFYNVVPFSLK  255 (348)
T ss_dssp             SCGGGCCGGGGSSCC--------------------------CEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCcCccCchhhcCCC--------------------------CCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            567799999998874                          2333 789999999999999999988653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=90.32  E-value=0.029  Score=51.83  Aligned_cols=46  Identities=15%  Similarity=0.112  Sum_probs=37.0

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..++..|+|||.+.+....                        .+....|+|++|+++.++++|..+|..
T Consensus       203 ~~gt~~y~aPE~~~~~~~~------------------------~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          203 QRCTISYRAPELFSVQSHC------------------------VIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             HHSCGGGCCGGGSSCCSEE------------------------EECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             ccCCcccCCHhHhccCCCc------------------------CCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            3568889999998775411                        356789999999999999999988754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=90.27  E-value=0.03  Score=52.44  Aligned_cols=42  Identities=17%  Similarity=0.116  Sum_probs=34.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|...
T Consensus       236 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          236 LPVKWMAPESLFEGI---------------------------YTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             ECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CccCccCHHHhccCC---------------------------CChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            466799999987654                           5567899999999999998 88887653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=90.26  E-value=0.036  Score=51.03  Aligned_cols=42  Identities=12%  Similarity=0.156  Sum_probs=35.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       186 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  227 (314)
T 3com_A          186 IGTPFWMAPEVIQEIG---------------------------YNCVADIWSLGITAIEMAEGKPPYAD  227 (314)
T ss_dssp             CSCGGGCCHHHHSSSC---------------------------BCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCCccChhhcCCCC---------------------------CCccccHHHHHHHHHHHHhCCCCCCC
Confidence            4677899999987754                           55678999999999999999988764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=90.24  E-value=0.027  Score=52.66  Aligned_cols=42  Identities=14%  Similarity=0.155  Sum_probs=34.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|...
T Consensus       181 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          181 VPIKWMALESILHRI---------------------------YTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             CCGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ccccccCHHHHcCCC---------------------------CChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            456799999988764                           5567899999999999999 98888653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=90.24  E-value=0.027  Score=51.30  Aligned_cols=40  Identities=15%  Similarity=0.129  Sum_probs=33.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+                            .+....|+|++|+++.++++|..+|..
T Consensus       188 ~t~~y~aPE~~~~----------------------------~~~~~~Di~slG~il~~ll~g~~pf~~  227 (285)
T 3is5_A          188 GTALYMAPEVFKR----------------------------DVTFKCDIWSAGVVMYFLLTGCLPFTG  227 (285)
T ss_dssp             TTGGGCCHHHHTT----------------------------CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccCcCChHHhcc----------------------------CCCcccCeehHHHHHHHHHhCCCCCCC
Confidence            5677999999754                            244678999999999999999988865

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=90.24  E-value=0.029  Score=50.56  Aligned_cols=42  Identities=19%  Similarity=0.162  Sum_probs=31.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          ......|+|++|+++.++++|..+|..
T Consensus       172 ~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~~l~~l~~g~~p~~~  213 (276)
T 2h6d_A          172 GSPNYAAPEVISGRL--------------------------YAGPEVDIWSCGVILYALLCGTLPFDD  213 (276)
T ss_dssp             -----CCTGGGTTSC--------------------------CCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCccccCHHHHcCCC--------------------------CCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            466799999988865                          234678999999999999999988754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=90.15  E-value=0.031  Score=51.39  Aligned_cols=41  Identities=20%  Similarity=0.226  Sum_probs=33.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       214 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~t~g~~p~~~  255 (314)
T 2ivs_A          214 IPVKWMAIESLFDHI---------------------------YTTQSDVWSFGVLLWEIVTLGGNPYPG  255 (314)
T ss_dssp             SCGGGCCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CcccccChhhhcCCC---------------------------cCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            456799999987643                           5677899999999999999 8877754

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=90.15  E-value=0.029  Score=50.96  Aligned_cols=45  Identities=13%  Similarity=0.137  Sum_probs=33.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+....                       ..+....|+|++|+++.++++|..+|..
T Consensus       171 ~t~~y~aPE~~~~~~~~-----------------------~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          171 GCKPYMAPERINPELNQ-----------------------KGYSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             CCCCCSCHHHHSCCTTC-------------------------CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CCccccChhhcChhhcC-----------------------cCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence            57779999997422100                       0456788999999999999999988754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=90.09  E-value=0.036  Score=50.19  Aligned_cols=41  Identities=15%  Similarity=0.135  Sum_probs=34.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       173 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  213 (283)
T 3bhy_A          173 GTPEFVAPEIVNYEP---------------------------LGLEADMWSIGVITYILLSGASPFLG  213 (283)
T ss_dssp             CCGGGCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCcCccCcceecCCC---------------------------CCcchhhhhHHHHHHHHHHCCCCCCC
Confidence            567799999987654                           45678999999999999999988765

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=90.05  E-value=0.016  Score=53.10  Aligned_cols=45  Identities=11%  Similarity=0.150  Sum_probs=35.0

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|...
T Consensus       186 ~~~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~pf~~~  230 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVR--------------------------GYDFKADIWSFGITAIELATGAAPYHKY  230 (303)
T ss_dssp             --CCCTTCCHHHHHHHH--------------------------CCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCCCccccCHHHhcccc--------------------------CCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence            35778899999876522                          3556789999999999999999888653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=90.04  E-value=0.038  Score=50.44  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       176 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          176 CGTPNYIAPEVLSKKG---------------------------HSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             CSCCSSCCHHHHTTSC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCCcCCcchhccCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4677899999987754                           45678999999999999999988865

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=89.97  E-value=0.026  Score=51.02  Aligned_cols=41  Identities=15%  Similarity=0.195  Sum_probs=33.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       178 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  218 (279)
T 2w5a_A          178 GTPYYMSPEQMNRMS---------------------------YNEKSDIWSLGCLLYELCALMPPFTA  218 (279)
T ss_dssp             SCCTTCCHHHHHCC----------------------------CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCccccChHHhccCC---------------------------CCchhhHHHHHHHHHHHHHCCCCCcc
Confidence            466799999987754                           45678999999999999999988765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=89.95  E-value=0.039  Score=50.24  Aligned_cols=39  Identities=18%  Similarity=0.220  Sum_probs=31.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEEL  224 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  224 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+
T Consensus       189 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~~  227 (298)
T 3pls_A          189 RLPVKWTALESLQTYR---------------------------FTTKSDVWSFGVLLWELLTRGAP  227 (298)
T ss_dssp             TCGGGGSCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CCCccccChhhhccCC---------------------------CChhhchhhHHHHHHHHhhCCCC
Confidence            4567899999998765                           45678999999999999995443

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=89.89  E-value=0.037  Score=50.72  Aligned_cols=42  Identities=14%  Similarity=0.122  Sum_probs=35.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       180 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~~  221 (303)
T 3a7i_A          180 VGTPFWMAPEVIKQSA---------------------------YDSKADIWSLGITAIELARGEPPHSE  221 (303)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCcCccCHHHHhcCC---------------------------CCchhhhHHHHHHHHHHccCCCCCCC
Confidence            4677899999987754                           45678999999999999999988754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=89.84  E-value=0.035  Score=51.38  Aligned_cols=44  Identities=16%  Similarity=0.132  Sum_probs=35.6

Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      ....+|..|+|||.+.+..                           +....|+|++|+++.++++|...+.
T Consensus       234 ~~~~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~~~~~~~  277 (332)
T 3qd2_B          234 TGQVGTKLYMSPEQIHGNN---------------------------YSHKVDIFSLGLILFELLYSFSTQM  277 (332)
T ss_dssp             CSCC-CGGGSCHHHHHCCC---------------------------CCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             cccCCCcCccChHHhcCCC---------------------------CcchhhHHHHHHHHHHHHHcCCChh
Confidence            4557899999999988764                           5678899999999999999876543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=89.81  E-value=0.031  Score=51.42  Aligned_cols=41  Identities=15%  Similarity=0.179  Sum_probs=34.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       212 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          212 LPLKWMAPETIFDRV---------------------------YTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             ECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cceeecCchhhcccc---------------------------ccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            466799999987654                           5567899999999999998 8888765

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=89.77  E-value=0.028  Score=51.29  Aligned_cols=45  Identities=11%  Similarity=0.180  Sum_probs=33.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+....                        .+....|+|++|+++.++++|..+|..
T Consensus       183 ~gt~~y~aPE~~~~~~~~------------------------~~~~~~Di~slG~il~el~~g~~p~~~  227 (289)
T 3og7_A          183 SGSILWMAPEVIRMQDSN------------------------PYSFQSDVYAFGIVLYELMTGQLPYSN  227 (289)
T ss_dssp             -CCCTTCCHHHHC----C------------------------CSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             CCCccccCchhhcccCCC------------------------CCCcccchHHHHHHHHHHHHCCCCccc
Confidence            467889999998632210                        355678999999999999999988865

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=89.70  E-value=0.044  Score=50.81  Aligned_cols=45  Identities=18%  Similarity=0.190  Sum_probs=34.8

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ++..|+|||.+.+...                        ..+....|+|++|+++.++++|..+|...
T Consensus       178 gt~~y~aPE~~~~~~~------------------------~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          178 GTPTYLAPEVLVSVGT------------------------AGYNRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             SCCTTCCHHHHHHTTT------------------------TTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             CCcCccCchhhccCCC------------------------CCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            4677999999753210                        04667899999999999999999988653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=89.66  E-value=0.063  Score=49.82  Aligned_cols=47  Identities=6%  Similarity=-0.142  Sum_probs=33.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ..+|..|+|||.+.+......                     ..+....|+|++|+++.++++|..++
T Consensus       206 ~~gt~~y~aPE~~~~~~~~~~---------------------~~~~~~~DiwslG~il~el~tg~~~~  252 (337)
T 3mdy_A          206 RVGTKRYMPPEVLDESLNRNH---------------------FQSYIMADMYSFGLILWEVARRCVSG  252 (337)
T ss_dssp             SCSCGGGCCHHHHTTCCCTTC---------------------THHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             CccCcceeChhhcccccCCcc---------------------ccCccccchHHHHHHHHHHHhccCcc
Confidence            357889999999987652110                     01112479999999999999995544

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=89.63  E-value=0.037  Score=51.77  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=35.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       202 ~gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          202 CGTPNYIAPEVLSKKG---------------------------HSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             CSCCSSCCHHHHHTSC---------------------------BCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCCccccCHHHhccCC---------------------------CCchhhHHHHHHHHHHHHHCcCCCCC
Confidence            4677899999987754                           45678999999999999999988864

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=89.61  E-value=0.033  Score=51.16  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=34.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|...
T Consensus       209 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~~  251 (313)
T 1t46_A          209 LPVKWMAPESIFNCV---------------------------YTFESDVWSYGIFLWELFSLGSSPYPGM  251 (313)
T ss_dssp             ECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CcceeeChHHhcCCC---------------------------CChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            456799999887654                           5577899999999999998 88887653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=89.52  E-value=0.033  Score=50.09  Aligned_cols=41  Identities=10%  Similarity=0.112  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       169 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~~ll~~g~~p~~~  210 (269)
T 4hcu_A          169 FPVKWASPEVFSFSR---------------------------YSSKSDVWSFGVLMWEVFSEGKIPYEN  210 (269)
T ss_dssp             CCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccCCHHHhcCCC---------------------------CCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence            356699999987654                           4567899999999999999 8888754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=89.47  E-value=0.038  Score=50.93  Aligned_cols=52  Identities=10%  Similarity=-0.047  Sum_probs=37.2

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..++..|+|||.+.+..+..                  ..-...+....|+|++|+++.++++|..+|..
T Consensus       194 ~~g~~~y~aPE~~~~~~~~~------------------~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  245 (319)
T 2y4i_B          194 QNGWLCHLAPEIIRQLSPDT------------------EEDKLPFSKHSDVFALGTIWYELHAREWPFKT  245 (319)
T ss_dssp             CSGGGGTSCHHHHSCBSCC--------------------CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred             CCCcccccChHHhhhccccc------------------cccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            34778899999988743210                  00001356789999999999999999988765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=89.31  E-value=0.044  Score=49.76  Aligned_cols=43  Identities=21%  Similarity=0.221  Sum_probs=35.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+...                         .+....|+|++|+++.++++|..+|..
T Consensus       188 g~~~y~aPE~~~~~~~-------------------------~~~~~~Di~slG~~l~~l~~g~~pf~~  230 (287)
T 4f0f_A          188 GNFQWMAPETIGAEEE-------------------------SYTEKADTYSFAMILYTILTGEGPFDE  230 (287)
T ss_dssp             CCCTTSCGGGSSCSSC-------------------------EECHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCccccCchhhccCCC-------------------------CcCchhhHHHHHHHHHHHHcCCCCCcc
Confidence            5677999999854331                         456789999999999999999998865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=89.25  E-value=0.035  Score=51.65  Aligned_cols=41  Identities=17%  Similarity=0.213  Sum_probs=34.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       179 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~el~~~g~~p~~~  220 (325)
T 3kex_A          179 TPIKWMALESIHFGK---------------------------YTHQSDVWSYGVTVWELMTFGAEPYAG  220 (325)
T ss_dssp             CCTTTSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcccccChHHhccCC---------------------------CChhhHhHHhHHHHHHHHhCCCCCccc
Confidence            456799999987654                           5567899999999999999 9988865

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=89.24  E-value=0.043  Score=52.17  Aligned_cols=48  Identities=19%  Similarity=0.158  Sum_probs=36.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+....                     ....+....|+|++|+++.++++|..+|..
T Consensus       260 ~gt~~y~aPE~~~~~~~~---------------------~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          260 CGTPGYLAPEILKCSMDE---------------------THPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             CSCGGGCCHHHHHHTTCT---------------------TSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCccChhhccccccc---------------------cCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            467889999998753210                     001366789999999999999999988854

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=89.24  E-value=0.039  Score=50.95  Aligned_cols=41  Identities=12%  Similarity=0.087  Sum_probs=34.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       165 gt~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~g~~p~~~  205 (307)
T 2eva_A          165 GSAAWMAPEVFEGSN---------------------------YSEKCDVFSWGIILWEVITRRKPFDE  205 (307)
T ss_dssp             CCTTSSCHHHHTCCC---------------------------CCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred             CCCceEChhhhCCCC---------------------------CCcHHHHHHHHHHHHHHHHCCCCchh
Confidence            567799999988754                           55778999999999999999988764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=89.21  E-value=0.027  Score=51.91  Aligned_cols=42  Identities=14%  Similarity=0.205  Sum_probs=34.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          ......|+|++|+++.++++|..+|..
T Consensus       200 ~~~~y~aPE~~~~~~--------------------------~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          200 GTRVYSPPEWISRHQ--------------------------YHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             SCTTTSCHHHHHHSC--------------------------BCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CcccccCceeeecCC--------------------------CCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            567799999987655                          234568999999999999999988753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=89.14  E-value=0.042  Score=50.92  Aligned_cols=46  Identities=15%  Similarity=0.117  Sum_probs=33.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+.....                      ..+....|+|++|+++.++++|..+|..
T Consensus       191 ~~~~y~aPE~~~~~~~~~----------------------~~~~~~~Di~slG~il~~l~~g~~p~~~  236 (326)
T 2x7f_A          191 GTPYWMAPEVIACDENPD----------------------ATYDFKSDLWSLGITAIEMAEGAPPLCD  236 (326)
T ss_dssp             CCGGGCCHHHHC------------------------------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCccccChhhhccccccC----------------------cCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            567799999987532100                      1466789999999999999999988754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=89.08  E-value=0.031  Score=50.90  Aligned_cols=41  Identities=12%  Similarity=0.095  Sum_probs=34.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       175 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~  216 (287)
T 1u59_A          175 WPLKWYAPECINFRK---------------------------FSSRSDVWSYGVTMWEALSYGQKPYKK  216 (287)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccccccCHHHhccCC---------------------------CCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            467799999986643                           5567899999999999998 9888765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=89.05  E-value=0.035  Score=49.88  Aligned_cols=41  Identities=12%  Similarity=0.131  Sum_probs=33.8

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       167 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~g~~p~~~  208 (268)
T 3sxs_A          167 FPVKWSAPEVFHYFK---------------------------YSSKSDVWAFGILMWEVFSLGKMPYDL  208 (268)
T ss_dssp             CCGGGCCHHHHHHSE---------------------------EETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cCcccCCHHHHhccC---------------------------CchhhhhHHHHHHHHHHHcCCCCCccc
Confidence            356799999987653                           5678999999999999998 8887754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=89.03  E-value=0.041  Score=51.17  Aligned_cols=41  Identities=20%  Similarity=0.169  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       228 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~t~g~~p~~~  269 (333)
T 2i1m_A          228 LPVKWMAPESIFDCV---------------------------YTVQSDVWSYGILLWEIFSLGLNPYPG  269 (333)
T ss_dssp             ECGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             CCccccCHHHhccCC---------------------------CChHHHHHHHHHHHHHHHcCCCCCCcc
Confidence            456799999987654                           5567899999999999998 8877754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=88.97  E-value=0.038  Score=50.06  Aligned_cols=40  Identities=15%  Similarity=0.165  Sum_probs=32.7

Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      +..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       180 ~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~~l~ell~~g~~pf~~  220 (281)
T 1mp8_A          180 PIKWMAPESINFRR---------------------------FTSASDVWMFGVCMWEILMHGVKPFQG  220 (281)
T ss_dssp             CGGGCCHHHHHHCC---------------------------CSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cccccChhhcccCC---------------------------CCCccCchHHHHHHHHHHhcCCCCCCc
Confidence            45699999987654                           4567899999999999996 8888765

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=88.90  E-value=0.028  Score=52.68  Aligned_cols=170  Identities=13%  Similarity=0.141  Sum_probs=78.9

Q ss_pred             CCcceEEEEEec-CCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccce--------eE-e---CCEEEE
Q psy9736           1 MKRGVTIDRFSS-DDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDS--------YL-V---GEELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~--------~~-~---~~~~~l   67 (400)
                      +|.|.++.+... ++..++.|++.+......+     +..+...+..-+...++.++..        +. .   .+.  -
T Consensus        40 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e-----~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg--~  112 (336)
T 3fhr_A           40 GVNGKVLECFHRRTGQKCALKLLYDSPKARQE-----VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG--E  112 (336)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEESSHHHHHH-----HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTE--E
T ss_pred             CCCeEEEEEEECCCCCEEEEEEecCcHHHHHH-----HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCC--C
Confidence            478888877665 6788899998776655532     3456677777666666555421        11 1   110  1


Q ss_pred             EEeccC---CCChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHh----CCeecCC-CCCCceEecCCCceEEeccchhh
Q psy9736          68 VMEYLP---GGSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHS----NQVIHRD-IKSDNILLGLDGSVKLSKWNRFI  137 (400)
Q Consensus        68 v~e~~~---~~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~----~~ivH~d-ikp~nil~~~~~~~~l~dfg~~~  137 (400)
                      +.+++.   +..+......     .....++..  .+.....+|.    .+|.-.+ -+-..+.+..-|..+...-.  .
T Consensus       113 L~~~l~~~~~~~l~~~~~~-----~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~--~  185 (336)
T 3fhr_A          113 LFSRIQERGDQAFTEREAA-----EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--A  185 (336)
T ss_dssp             HHHHHHTC-CCCCBHHHHH-----HHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred             HHHHHHhcCCCCCCHHHHH-----HHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc--c
Confidence            122221   1122211110     112222221  2233345563    2444321 12233666666665544322  1


Q ss_pred             hhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccc
Q psy9736         138 ATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDS  217 (400)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (400)
                      ..     .            ..++..|+|||.+.+.                           .+....|+|++|+++.+
T Consensus       186 ~~-----~------------~~~t~~y~aPE~~~~~---------------------------~~~~~~Di~slG~il~~  221 (336)
T 3fhr_A          186 LQ-----T------------PCYTPYYVAPEVLGPE---------------------------KYDKSCDMWSLGVIMYI  221 (336)
T ss_dssp             -----------------------------------C---------------------------HHHHHHHHHHHHHHHHH
T ss_pred             cc-----c------------CCCCcCccChhhhCCC---------------------------CCCchhhHHHHHHHHHH
Confidence            11     0            1346779999998654                           35678899999999999


Q ss_pred             ccccccccccC
Q psy9736         218 YLVGEELWYTK  228 (400)
Q Consensus       218 ~l~~~~~~~~~  228 (400)
                      +++|..+|...
T Consensus       222 l~~g~~pf~~~  232 (336)
T 3fhr_A          222 LLCGFPPFYSN  232 (336)
T ss_dssp             HHHSSCCC---
T ss_pred             HHHCCCCCCCc
Confidence            99999988653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=88.89  E-value=0.051  Score=51.88  Aligned_cols=41  Identities=15%  Similarity=0.138  Sum_probs=34.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       255 ~t~~y~aPE~~~~~~---------------------------~~~~~DiwslG~il~ellt~g~~p~~~  296 (382)
T 3tt0_A          255 LPVKWMAPEALFDRI---------------------------YTHQSDVWSFGVLLWEIFTLGGSPYPG  296 (382)
T ss_dssp             CGGGGSCHHHHHSCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCcceeCHHHhcCCC---------------------------CCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            466799999988764                           5567899999999999999 8887754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=88.85  E-value=0.038  Score=50.94  Aligned_cols=53  Identities=11%  Similarity=0.129  Sum_probs=35.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+.....                ........+....|+|++|+++.++++|..+|..
T Consensus       189 ~gt~~y~aPE~~~~~~~~~----------------~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          189 VGTVNYMPPEAIKDMSSSR----------------ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             -CCGGGCCHHHHTTCC--------------------------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCCcCCHHHHhhccccc----------------ccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            3677899999987743110                0000011466789999999999999999988754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=88.80  E-value=0.042  Score=51.23  Aligned_cols=41  Identities=17%  Similarity=0.177  Sum_probs=34.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       238 ~t~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          238 IPIRWMPPESIFYNR---------------------------YTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             BCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ccceecChhhhccCC---------------------------cCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            467799999987654                           5567899999999999999 8877754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=88.71  E-value=0.045  Score=50.07  Aligned_cols=44  Identities=11%  Similarity=0.141  Sum_probs=35.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+...                         .+....|+|++|+++.++++|..+|..
T Consensus       172 ~~~~~y~aPE~~~~~~~-------------------------~~~~~~Di~slG~il~~l~~g~~p~~~  215 (305)
T 2wtk_C          172 QGSPAFQPPEIANGLDT-------------------------FSGFKVDIWSAGVTLYNITTGLYPFEG  215 (305)
T ss_dssp             CSCGGGCCHHHHTCCSC-------------------------EESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCCCcChhhccCccc-------------------------CCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            36788999999887542                         235678999999999999999988764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=88.53  E-value=0.043  Score=50.89  Aligned_cols=47  Identities=9%  Similarity=0.031  Sum_probs=23.2

Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ...++..|+|||.+.+...                        ..+....|+|++|+++.++++|..+|..
T Consensus       209 ~~~~t~~y~aPE~~~~~~~------------------------~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          209 TRNTTPMYRTPEIIDLYSN------------------------FPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             ---------------CCTT------------------------SCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             cccCCCCcCChhhhhcccc------------------------CCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            3457888999999842210                        0356788999999999999999988864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=88.49  E-value=0.047  Score=50.74  Aligned_cols=41  Identities=10%  Similarity=0.044  Sum_probs=33.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       207 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~  248 (327)
T 2yfx_A          207 LPVKWMPPEAFMEGI---------------------------FTSKTDTWSFGVLLWEIFSLGYMPYPS  248 (327)
T ss_dssp             SCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCcceeCHhHhcCCC---------------------------CCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence            466799999987654                           5567999999999999998 8877754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=88.27  E-value=0.039  Score=49.95  Aligned_cols=41  Identities=12%  Similarity=0.213  Sum_probs=33.4

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       176 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~llt~g~~p~~~  217 (281)
T 3cc6_A          176 LPIKWMSPESINFRR---------------------------FTTASDVWMFAVCMWEILSFGKQPFFW  217 (281)
T ss_dssp             CCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceeCchhhccCC---------------------------CCchhccHHHHHHHHHHHhCCCCCccc
Confidence            356699999987654                           4567899999999999998 8888754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=88.19  E-value=0.046  Score=48.88  Aligned_cols=41  Identities=10%  Similarity=0.112  Sum_probs=33.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       167 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~g~~p~~~  208 (267)
T 3t9t_A          167 FPVKWASPEVFSFSR---------------------------YSSKSDVWSFGVLMWEVFSEGKIPYEN  208 (267)
T ss_dssp             CCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccccccChhhhcCCC---------------------------ccchhchhhhHHHHHHHhccCCCCCCC
Confidence            356699999987654                           4567899999999999999 7887754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=88.02  E-value=0.047  Score=49.41  Aligned_cols=41  Identities=7%  Similarity=0.079  Sum_probs=33.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       183 ~~~~y~aPE~~~~~~---------------------------~~~~~Dv~slG~~l~~l~t~g~~p~~~  224 (283)
T 3gen_A          183 FPVRWSPPEVLMYSK---------------------------FSSKSDIWAFGVLMWEIYSLGKMPYER  224 (283)
T ss_dssp             SCGGGCCHHHHHHCC---------------------------CSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cCcccCCHHHhccCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            356699999987654                           4567899999999999998 8888764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=87.98  E-value=0.031  Score=53.74  Aligned_cols=52  Identities=13%  Similarity=0.072  Sum_probs=37.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      .+|..|+|||.+.+.....                   .....+....|+|++|+++.++++|..+|....
T Consensus       176 ~gt~~y~aPE~~~~~~~~~-------------------~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~  227 (396)
T 4eut_A          176 YGTEEYLHPDMYERAVLRK-------------------DHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (396)
T ss_dssp             SSCCTTCCHHHHHHHCC---------------------CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             cCCccccCHHHhhcccccc-------------------ccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            3677899999976522100                   000156778999999999999999999987543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=87.75  E-value=0.05  Score=49.11  Aligned_cols=41  Identities=15%  Similarity=0.124  Sum_probs=33.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..++..
T Consensus       183 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~~~~~~~  223 (284)
T 2a19_B          183 GTLRYMSPEQISSQD---------------------------YGKEVDLYALGLILAELLHVCDTAFE  223 (284)
T ss_dssp             SCCTTSCHHHHHCSC---------------------------CCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred             CcccccChhhhccCC---------------------------CcchhhhHHHHHHHHHHHhcCCcchh
Confidence            567899999987754                           45678999999999999999876643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=87.65  E-value=0.06  Score=49.12  Aligned_cols=42  Identities=14%  Similarity=0.242  Sum_probs=33.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++ +.++|..
T Consensus       193 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~~~~~~~~  235 (298)
T 3f66_A          193 KLPVKWMALESLQTQK---------------------------FTTKSDVWSFGVLLWELMTRGAPPYPD  235 (298)
T ss_dssp             CBCGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCCccccChHHhcCCC---------------------------CChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            4567799999987754                           4567899999999999999 5555543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=87.62  E-value=0.059  Score=49.21  Aligned_cols=27  Identities=15%  Similarity=0.102  Sum_probs=23.4

Q ss_pred             hhccccccceeeeeccccccccccccc
Q psy9736         201 SYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+....|+|++|+++.++++|..+|..
T Consensus       198 ~~~~~~Di~slG~il~~l~~g~~p~~~  224 (302)
T 2j7t_A          198 PYDYKADIWSLGITLIEMAQIEPPHHE  224 (302)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence            356789999999999999999988764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=87.47  E-value=0.057  Score=49.64  Aligned_cols=41  Identities=15%  Similarity=0.241  Sum_probs=33.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       198 ~~~~y~aPE~~~~~~---------------------------~~~~~Dv~slG~il~~l~~g~~p~~~  238 (310)
T 2wqm_A          198 GTPYYMSPERIHENG---------------------------YNFKSDIWSLGCLLYEMAALQSPFYG  238 (310)
T ss_dssp             -CCSSCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred             CCeeEeChHHhCCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            567799999987754                           45678999999999999999988764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=87.46  E-value=0.045  Score=49.68  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=33.8

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       186 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~g~~p~~~  227 (291)
T 1u46_A          186 VPFAWCAPESLKTRT---------------------------FSHASDTWMFGVTLWEMFTYGQEPWIG  227 (291)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CCceeeCchhhcCCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            456699999986643                           5678899999999999999 8888764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=87.45  E-value=0.061  Score=51.37  Aligned_cols=42  Identities=14%  Similarity=0.242  Sum_probs=33.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++ |.++|..
T Consensus       257 ~~~~~y~aPE~~~~~~---------------------------~~~~~DvwSlG~il~ellt~~~~p~~~  299 (373)
T 3c1x_A          257 KLPVKWMALESLQTQK---------------------------FTTKSDVWSFGVLLWELMTRGAPPYPD  299 (373)
T ss_dssp             -CCGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred             CCcccccChHHhcCCC---------------------------CCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence            3466799999987654                           5577899999999999999 6666654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=87.44  E-value=0.053  Score=50.29  Aligned_cols=45  Identities=18%  Similarity=0.219  Sum_probs=23.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+....                       ..+....|+|++|+++.++++|..+|..
T Consensus       187 gt~~y~aPE~~~~~~~~-----------------------~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (327)
T 3aln_A          187 GCRPYMAPERIDPSASR-----------------------QGYDVRSDVWSLGITLYELATGRFPYPK  231 (327)
T ss_dssp             ------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             CCccccCceeeccccCc-----------------------CCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            56779999998432100                       1356789999999999999999988865

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=87.26  E-value=0.94  Score=39.72  Aligned_cols=57  Identities=28%  Similarity=0.310  Sum_probs=40.7

Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCceEEec
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSK  132 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~~~l~d  132 (400)
                      +|.+.++.  .++++++++-++.|-+.+|.-.-. ..-..+=+.|..|++..+|.+...+
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            67788863  489999999999999888766521 1112334456888888888877653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=87.24  E-value=0.046  Score=49.82  Aligned_cols=41  Identities=10%  Similarity=0.132  Sum_probs=33.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       182 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~~g~~p~~~  223 (291)
T 1xbb_A          182 WPVKWYAPECINYYK---------------------------FSSKSDVWSFGVLMWEAFSYGQKPYRG  223 (291)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             CCceeeChHHhccCC---------------------------CChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence            456799999986653                           5567899999999999999 9888765

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=87.19  E-value=0.068  Score=49.19  Aligned_cols=41  Identities=17%  Similarity=0.170  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       211 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~el~~~g~~p~~~  252 (313)
T 3brb_A          211 MPVKWIAIESLADRV---------------------------YTSKSDVWAFGVTMWEIATRGMTPYPG  252 (313)
T ss_dssp             CCGGGSCHHHHHSSC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCccccCchhhcCCC---------------------------ccchhhhHHHHHHHHHHHhcCCCCCcc
Confidence            456799999987754                           4567899999999999999 7777754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=87.12  E-value=0.055  Score=49.01  Aligned_cols=41  Identities=17%  Similarity=0.145  Sum_probs=33.4

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       174 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~ll~~g~~p~~~  215 (288)
T 3kfa_A          174 FPIKWTAPESLAYNK---------------------------FSIKSDVWAFGVLLWEIATYGMSPYPG  215 (288)
T ss_dssp             ECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cccCcCChhhhccCC---------------------------CCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            356699999987654                           4567899999999999999 8887754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=87.08  E-value=0.072  Score=49.76  Aligned_cols=41  Identities=15%  Similarity=0.271  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       212 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~pf~~  253 (333)
T 1mqb_A          212 IPIRWTAPEAISYRK---------------------------FTSASDVWSFGIVMWEVMTYGERPYWE  253 (333)
T ss_dssp             CCGGGSCHHHHHSCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccccccCchhcccCC---------------------------CCchhhhHHHHHHHHHHHcCCCCCccc
Confidence            456799999987754                           4567899999999999998 8887754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=86.98  E-value=0.055  Score=50.47  Aligned_cols=41  Identities=12%  Similarity=0.135  Sum_probs=33.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++ |..+|..
T Consensus       221 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~ellt~g~~p~~~  262 (334)
T 2pvf_A          221 LPVKWMAPEALFDRV---------------------------YTHQSDVWSFGVLMWEIFTLGGSPYPG  262 (334)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             cccceeChHHhcCCC---------------------------cChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            456799999987643                           5677899999999999999 8887754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=86.94  E-value=0.049  Score=50.47  Aligned_cols=41  Identities=15%  Similarity=0.169  Sum_probs=34.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       199 ~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          199 SPVFWYAPECLKEYK---------------------------FYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CCceeeChHHhcCCC---------------------------CCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            456699999987654                           55678999999999999999888764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=86.81  E-value=0.11  Score=48.41  Aligned_cols=44  Identities=9%  Similarity=-0.080  Sum_probs=32.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .++..|+|||.+.+......                     ..+....|+|++|+++.++++|..
T Consensus       212 ~gt~~y~aPE~~~~~~~~~~---------------------~~~~~~~Di~slG~il~el~tg~~  255 (342)
T 1b6c_B          212 VGTKRYMAPEVLDDSINMKH---------------------FESFKRADIYAMGLVFWEIARRCS  255 (342)
T ss_dssp             CCCGGGCCHHHHTSCCCTTC---------------------HHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred             CcCcccCCHhhhcccccccc---------------------cccCCcccHHHHHHHHHHHHhccC
Confidence            57888999999887642100                     023367899999999999999943

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=86.80  E-value=0.045  Score=49.77  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=35.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+...                         .+....|+|++|+++.++++|..+|..
T Consensus       184 ~~~~~y~aPE~~~~~~~-------------------------~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          184 TGTLQYMAPEIIDKGPR-------------------------GYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             CCCGGGCCHHHHHHGGG-------------------------GCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             CCCccccChhhhcCCCC-------------------------CCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            36778999999765320                         256788999999999999999988864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=86.76  E-value=0.05  Score=49.47  Aligned_cols=40  Identities=25%  Similarity=0.326  Sum_probs=32.9

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+.                            +....|+|++|+++.++++|..+|..
T Consensus       185 ~~~~y~aPE~~~~~----------------------------~~~~~Di~slG~~l~~l~~g~~p~~~  224 (287)
T 2wei_A          185 GTAYYIAPEVLRGT----------------------------YDEKCDVWSAGVILYILLSGTPPFYG  224 (287)
T ss_dssp             HHHTTCCHHHHTTC----------------------------CCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CcccccChHHhcCC----------------------------CCCchhhHhHHHHHHHHHhCCCCCCC
Confidence            35669999997663                            44678999999999999999988765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=86.74  E-value=0.05  Score=50.56  Aligned_cols=42  Identities=14%  Similarity=0.091  Sum_probs=34.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       191 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          191 QSPIFWYAPESLSDNI---------------------------FSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             CSCGGGSCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CccccccCHHHhccCC---------------------------CChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            4567799999987653                           56788999999999999999887754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=86.59  E-value=0.061  Score=49.44  Aligned_cols=46  Identities=20%  Similarity=0.307  Sum_probs=32.6

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+.....                      ..+....|+|++|+++.++++|..+|..
T Consensus       186 ~~~~y~aPE~~~~~~~~~----------------------~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (318)
T 2dyl_A          186 GCAAYMAPERIDPPDPTK----------------------PDYDIRADVWSLGISLVELATGQFPYKN  231 (318)
T ss_dssp             -CCTTCCHHHHC------------------------------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCccccChhhcccccccc----------------------cCCccccchhhHHHHHHHHHhCCCCCCC
Confidence            567799999986432110                      1456789999999999999999988764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=86.59  E-value=0.057  Score=49.32  Aligned_cols=41  Identities=15%  Similarity=0.160  Sum_probs=33.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.++++|..++.
T Consensus       190 ~~~~~y~aPE~~~~~~---------------------------~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          190 DSPVFWYAPECLMQSK---------------------------FYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             TCCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCCccccCCeeecCCC---------------------------CCcchhHHHHHHHHHHHHHccCCCc
Confidence            3566799999987654                           5567899999999999999877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	400
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-33
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	9e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-28
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-05
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-27
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-25
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-16
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-25
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.001
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-25
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-04
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-25
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-25
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-24
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-23
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-22
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.002
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-04
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.003
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-22
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-10
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-21
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	8e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-21
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.003
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	0.002
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-20
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-19
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	0.001
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-19
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-19
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-19
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.001
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-17
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	0.002
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-05
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-17
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-16
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-16
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	0.003
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-15
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-04

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 2e-33
 Identities = 99/132 (75%), Positives = 107/132 (81%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC 85
           + L QQPKKELIINEILVMRENK+PNIVNYLDSYLVG+ELWVVMEYL GGSLTDVVTETC
Sbjct: 53  MNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
           MDEGQIAAVCRE LQALEFLHSNQVIHRDIKSDNILLG+DGSVKL+ +            
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172

Query: 146 SKVIIYCWDWTA 157
              ++    W A
Sbjct: 173 RSTMVGTPYWMA 184

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 9e-18
 Identities = 47/73 (64%), Positives = 59/73 (80%)

Query: 324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPL 383
           +  +ALYLIATN  PE++  EKLS IF+DFL++CL+ +VE R SA  LL+H FLKIA+PL
Sbjct: 220 NPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPL 279

Query: 384 ASLTPLIMAAKEA 396
           +SLTPLI AAKEA
Sbjct: 280 SSLTPLIAAAKEA 292

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 11/85 (12%)

Query: 159 ASGTVYTAIESSTGME-----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           ASGTVYTA++ +TG E           PKKELIINEILVMRENK+PNIVNYLDSYLVG+E
Sbjct: 32  ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE 91

Query: 208 LWNIVNYLDSYLVGEELWYTKPIEE 232
           LW ++ YL    + + +  T   E 
Sbjct: 92  LWVVMEYLAGGSLTDVVTETCMDEG 116

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 2e-28
 Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)

Query: 26  ITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET- 84
           I    + + E  + EI ++    HPNIV  LD++     LW+++E+  GG++  V+ E  
Sbjct: 45  IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE 104

Query: 85  -CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             + E QI  VC++ L AL +LH N++IHRD+K+ NIL  LDG +KL+
Sbjct: 105 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA 152

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 327 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 386
           + L  IA ++ P + +  + S  F+DFL +CLE+ V+ R + S LL+HPF+ +      +
Sbjct: 222 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN-KPI 280

Query: 387 TPLIMAAK 394
             LI  AK
Sbjct: 281 RELIAEAK 288

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 12/87 (13%)

Query: 159 ASGTVYTAIESSTG-----------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           A G VY A    T             E + E  + EI ++    HPNIV  LD++     
Sbjct: 24  AFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENN 83

Query: 208 LWNIVNYLDSYLVGEELW-YTKPIEEP 233
           LW ++ +     V   +    +P+ E 
Sbjct: 84  LWILIEFCAGGAVDAVMLELERPLTES 110

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-27
 Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 6/137 (4%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET-CMDEGQIA 92
           +  II E+ V+ E   P IV +  ++    E+ + ME++ GGSL  V+ +   + E  + 
Sbjct: 48  RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107

Query: 93  AVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY 151
            V   V++ L +L   ++++HRD+K  NIL+   G +KL  +   ++ +L   ++   + 
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLIDSMANSFVG 165

Query: 152 CWDWTA--VASGTVYTA 166
              + +     GT Y+ 
Sbjct: 166 TRSYMSPERLQGTHYSV 182

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 12/87 (13%)

Query: 159 ASGTVYTAIESSTGM------------EPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
             G V+      +G+               +  II E+ V+ E   P IV +  ++    
Sbjct: 18  NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77

Query: 207 ELWNIVNYLDSYLVGEELWYTKPIEEP 233
           E+   + ++D   + + L     I E 
Sbjct: 78  EISICMEHMDGGSLDQVLKKAGRIPEQ 104

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 21/106 (19%), Positives = 33/106 (31%), Gaps = 1/106 (0%)

Query: 274 LTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF-LIPYLFILSCRQALYLI 332
                P    D  + +      + G   E     +   +P                L   
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256

Query: 333 ATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
             N+ P        S  FQDF+++CL +    RA    L+ H F+K
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (258), Expect = 1e-25
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K + +        K + II E+  +++ +HPN + Y   YL     W+VMEY  G +   
Sbjct: 46  KKM-SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL 104

Query: 80  V-VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           + V +  + E +IAAV    LQ L +LHS+ +IHRD+K+ NILL   G VKL 
Sbjct: 105 LEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 157

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.6 bits (188), Expect = 3e-16
 Identities = 57/279 (20%), Positives = 97/279 (34%), Gaps = 53/279 (18%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
           + G VY A +                     K + II E+  +++ +HPN + Y   YL 
Sbjct: 27  SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEPS--------------------NTTDEKTSTS 244
               W ++ Y           + KP++E                         D K    
Sbjct: 87  EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 146

Query: 245 SASPLSTPPLS---LIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGL--TGS 299
             S      L          P+     +  G    + P V+L  ++ Q      +   G 
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPAN----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202

Query: 300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLE 359
               L   K              ++   ALY IA N+ P ++     S+ F++F+D CL+
Sbjct: 203 TCIELAERKPPLFN---------MNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQ 252

Query: 360 EEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK 398
           +  + R ++ +LLKH F+   RP   +  LI   K+A +
Sbjct: 253 KIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR 291

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 3e-25
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 3/100 (3%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCMDEGQI 91
            +   NE+ V+R+ +H NI+ ++  Y    +L +V ++  G SL   +   ET  +  ++
Sbjct: 48  LQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL 106

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
             + R+  Q +++LH+  +IHRD+KS+NI L  D +VK+ 
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG 146

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 35/262 (13%), Positives = 91/262 (34%), Gaps = 61/262 (23%)

Query: 159 ASGTVYTA----------IESSTGMEPKKELIINEILVMRENKHPNIVNYLDS------- 201
           + GTVY            +  +     + +   NE+ V+R+ +H NI+ ++         
Sbjct: 20  SFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79

Query: 202 ----YLVGEELWN-------------IVNYLDSYLVGEELWYTKPIE----EPSNTTDEK 240
               +  G  L++             +++       G +  + K I     + +N    +
Sbjct: 80  IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139

Query: 241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSI 300
             T     +    L+ ++     +     L+G++  + P V+  ++KN  +  + +    
Sbjct: 140 DLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV---- 192

Query: 301 LEFLGPHKWSFQPHFL------IPYLFILSCRQALYLIATNKKPEI--KEKEKLSQIFQD 352
                   ++F           +PY  I +  Q ++++          K +    +  + 
Sbjct: 193 --------YAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244

Query: 353 FLDQCLEEEVETRASASLLLKH 374
            + +CL+++ + R     +L  
Sbjct: 245 LMAECLKKKRDERPLFPQILAS 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 4e-25
 Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+L     L +   +  +  E+ +    +HPNI+     +     +++++EY P G++  
Sbjct: 37  KVL-FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 95

Query: 80  VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIA 138
            + +    DE + A    E+  AL + HS +VIHRDIK +N+LLG  G +K++ +    +
Sbjct: 96  ELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--WS 153

Query: 139 TKLYIEISKVIIYCWDWTA--VASGTVYTA 166
                     +    D+    +  G ++  
Sbjct: 154 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 183

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 4e-05
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 14/89 (15%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
             G VY A E  +                   +  +  E+ +    +HPNI+     +  
Sbjct: 18  KFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 77

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEP 233
              ++ I+ Y     V  EL      +E 
Sbjct: 78  ATRVYLILEYAPLGTVYRELQKLSKFDEQ 106

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 7/43 (16%), Positives = 20/43 (46%)

Query: 336 KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
            + E    + +++  +D + + L+     R     +L+HP++ 
Sbjct: 217 SRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 259

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 5e-25
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV-TETCMDEGQIA 92
            E I  EI + +   H N+V +      G   ++ +EY  GG L D +  +  M E    
Sbjct: 47  PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 106

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
               +++  + +LH   + HRDIK +N+LL    ++K+S + 
Sbjct: 107 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG 148

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 2e-12
 Identities = 38/260 (14%), Positives = 66/260 (25%), Gaps = 52/260 (20%)

Query: 159 ASGTVYTAIESSTG------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           A G V  A+   T                  E I  EI + +   H N+V +      G 
Sbjct: 17  AYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 76

Query: 207 ELWNIVNYLDSYLVGEELWYTKPIEEPSNTT--------------------DEKTSTSSA 246
             +  + Y     + + +     + EP                        D K      
Sbjct: 77  IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 136

Query: 247 SP-----LSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT---GLTG 298
                  +S   L+ +          + + G L  + P ++  K +     P        
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVWSCGI 194

Query: 299 SILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCL 358
            +   L       QP          S     Y     KK  +   +K+       L + L
Sbjct: 195 VLTAMLAGELPWDQP----------SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 244

Query: 359 EEEVETRASASLLLKHPFLK 378
            E    R +   + K  +  
Sbjct: 245 VENPSARITIPDIKKDRWYN 264

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  102 bits (255), Expect = 5e-25
 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +  R F +K ++ P        K  + NEI +M +  HP ++N  D++    E+ +++E+
Sbjct: 52  ATGRVFVAKFINTP----YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107

Query: 72  LPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL--GLDGS 127
           L GG L D +      M E ++    R+  + L+ +H + ++H DIK +NI+       S
Sbjct: 108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS 167

Query: 128 VKLS 131
           VK+ 
Sbjct: 168 VKII 171

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 45.4 bits (107), Expect = 7e-06
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTG-----------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           A G V+  +E +TG               K  + NEI +M +  HP ++N  D++    E
Sbjct: 41  AFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE 100

Query: 208 LWNIVNYLD 216
           +  I+ +L 
Sbjct: 101 MVLILEFLS 109

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 335 NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           + + +      +S   +DF+   L++E   R +    L+HP+LK
Sbjct: 244 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 287

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  101 bits (252), Expect = 1e-24
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 8/124 (6%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +    F +K +  P     +  KE +  EI  M   +HP +VN  D++    E+ ++ E+
Sbjct: 49  ATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104

Query: 72  LPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD--GS 127
           + GG L + V +    M E +     R+V + L  +H N  +H D+K +NI+        
Sbjct: 105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNE 164

Query: 128 VKLS 131
           +KL 
Sbjct: 165 LKLI 168

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 11/69 (15%)

Query: 159 ASGTVYTAIESSTGM-----------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 207
           A G V+   E +TG            E  KE +  EI  M   +HP +VN  D++    E
Sbjct: 38  AFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97

Query: 208 LWNIVNYLD 216
           +  I  ++ 
Sbjct: 98  MVMIYEFMS 106

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 324 SCRQALYLIATNK-KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           +  + L  + +     +      +S+  +DF+ + L  +  TR +    L+HP+L 
Sbjct: 229 NDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 284

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 3e-24
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 2/120 (1%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +  R +  KIL     + ++ K   +  E  VM    HP  V    ++   E+L+  + Y
Sbjct: 31  ATSREYAIKIL-EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 89

Query: 72  LPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
              G L   + +    DE        E++ ALE+LH   +IHRD+K +NILL  D  +++
Sbjct: 90  AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 149

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 7e-08
 Identities = 36/256 (14%), Positives = 70/256 (27%), Gaps = 40/256 (15%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
           +  TV  A E +T                E K   +  E  VM    HP  V    ++  
Sbjct: 20  SFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 79

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPST 264
            E+L+  ++Y  +  + + +      +E           S+   L    +      P + 
Sbjct: 80  DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENI 139

Query: 265 PPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILS 324
                 +  +           +               +++ P   + +       L+ L 
Sbjct: 140 LLNE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALG 197

Query: 325 CRQALYLIATNKKP----------------EIKEKEKLSQIFQDFLDQCLEEEVETRASA 368
           C   +Y +     P                E    EK     +D +++ L  +   R   
Sbjct: 198 C--IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGC 255

Query: 369 ------SLLLKHPFLK 378
                   L  HPF +
Sbjct: 256 EEMEGYGPLKAHPFFE 271

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 96.7 bits (240), Expect = 2e-23
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 2/106 (1%)

Query: 31  QPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE-TCMDE 88
           Q  +E  + E+ ++R+ + HPNI+   D+Y      ++V + +  G L D +TE   + E
Sbjct: 50  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE 109

Query: 89  GQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
            +   + R +L+ +  LH   ++HRD+K +NILL  D ++KL+ + 
Sbjct: 110 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 155

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 335 NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           N +    E +  S   +D + + L  + + R +A   L HPF +
Sbjct: 231 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 96.3 bits (239), Expect = 1e-22
 Identities = 29/152 (19%), Positives = 63/152 (41%), Gaps = 5/152 (3%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELI--INEILVMRENKHPNIVNYLDSYLVGEELW 66
           R +   + +  K L       +Q +   +     + ++     P IV    ++   ++L 
Sbjct: 24  RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83

Query: 67  VVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
            +++ + GG L   +++     E  +     E++  LE +H+  V++RD+K  NILL   
Sbjct: 84  FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 143

Query: 126 GSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
           G V++S     +A     +     +    + A
Sbjct: 144 GHVRISDLG--LACDFSKKKPHASVGTHGYMA 173

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 17/92 (18%)

Query: 159 ASGTVYTAIESSTG--------------MEPKKELIINEILV---MRENKHPNIVNYLDS 201
             G VY   ++ TG              M+  + L +NE ++   +     P IV    +
Sbjct: 16  GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 75

Query: 202 YLVGEELWNIVNYLDSYLVGEELWYTKPIEEP 233
           +   ++L  I++ ++   +   L       E 
Sbjct: 76  FHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 107

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-22
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 14/135 (10%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYL--VGEELW 66
           R  SD +    K L        + +K+++++E+ ++RE KHPNIV Y D  +      L+
Sbjct: 24  RRKSDGKILVWKELD--YGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81

Query: 67  VVMEYLPGGSLTDVVTE-----TCMDEGQIAAVCREVLQALEFLH-----SNQVIHRDIK 116
           +VMEY  GG L  V+T+       +DE  +  V  ++  AL+  H      + V+HRD+K
Sbjct: 82  IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 141

Query: 117 SDNILLGLDGSVKLS 131
             N+ L    +VKL 
Sbjct: 142 PANVFLDGKQNVKLG 156

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 324 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 377
           S ++    I   K   I  +   S    + + + L  +   R S   +L++P +
Sbjct: 218 SQKELAGKIREGKFRRIPYR--YSDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 15/73 (20%)

Query: 159 ASGTVYTAIESSTG-------------MEPKKELIINEILVMRENKHPNIVNYLDSYL-- 203
           + G        S G              E +K+++++E+ ++RE KHPNIV Y D  +  
Sbjct: 16  SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 75

Query: 204 VGEELWNIVNYLD 216
               L+ ++ Y +
Sbjct: 76  TNTTLYIVMEYCE 88

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 2e-22
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQ 90
            +E  I E  VM +  HP +V      L    + +V E++  G L+D +           
Sbjct: 43  SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET 102

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +  +C +V + + +L    VIHRD+ + N L+G +  +K+S +
Sbjct: 103 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDF 145

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 7e-06
 Identities = 30/247 (12%), Positives = 66/247 (26%), Gaps = 39/247 (15%)

Query: 159 ASGTVYTAIESSTGM---------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
             G V+     +               +E  I E  VM +  HP +V      L    + 
Sbjct: 17  QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC 76

Query: 210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPP-------PP 262
            +  +++    G    Y +           +T       +      L +           
Sbjct: 77  LVFEFMEH---GCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAAR 130

Query: 263 STPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSIL--EFLGPHKWSFQPH---FLI 317
           +          ++       +  ++  ++  T         E     ++S +     F +
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGV 190

Query: 318 PYLFILSCR----------QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS 367
               + S            + +  I+T  +         S      ++ C +E  E R +
Sbjct: 191 LMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWKERPEDRPA 248

Query: 368 ASLLLKH 374
            S LL+ 
Sbjct: 249 FSRLLRQ 255

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 2e-22
 Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV--TETCM 86
            ++   E ++ E  +M +  +P IV  +      E L +VME   GG L   +      +
Sbjct: 48  TEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEI 106

Query: 87  DEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
               +A +  +V   +++L     +HRD+ + N+LL      K+S
Sbjct: 107 PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS 151

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-06
 Identities = 29/267 (10%), Positives = 70/267 (26%), Gaps = 48/267 (17%)

Query: 159 ASGTVYTAIESSTG--------------MEPKKELIINEILVMRENKHPNIVNYLDSYLV 204
             G+V   +                    +   E ++ E  +M +  +P IV  +     
Sbjct: 21  NFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQ 79

Query: 205 GEELWNIVNY-----LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQP 259
            E L  ++       L  +LVG+     + I   +        +     L          
Sbjct: 80  AEALMLVMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 260 PPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH----- 314
              +    +     ++       L  + +  T  +     + ++  P   +F+       
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL-KWYAPECINFRKFSSRSD 194

Query: 315 ---FLIPYLFILSCR----------QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEE 361
              + +     LS            + +  I   K+ E     +        +  C   +
Sbjct: 195 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYK 252

Query: 362 VETRASAS---LLLKHPFLKIARPLAS 385
            E R         ++  +  +A  +  
Sbjct: 253 WEDRPDFLTVEQRMRACYYSLASKVEG 279

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.8 bits (230), Expect = 4e-22
 Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 9/145 (6%)

Query: 27  TLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE-LWVVMEYLPGGSLTDVVTE-- 83
            +      +  + E  VM + +H N+V  L   +  +  L++V EY+  GSL D +    
Sbjct: 37  CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 96

Query: 84  -TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
            + +    +     +V +A+E+L  N  +HRD+ + N+L+  D   K+S    F  TK  
Sbjct: 97  RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSD---FGLTKEA 153

Query: 143 IEISKVIIYCWDWTA--VASGTVYT 165
                       WTA        ++
Sbjct: 154 SSTQDTGKLPVKWTAPEALREKKFS 178

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 27/246 (10%), Positives = 62/246 (25%), Gaps = 41/246 (16%)

Query: 159 ASGTVYTAIESSTGM-------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI 211
             G V         +       +   +  + E  VM + +H N+V  L   +  +    I
Sbjct: 19  EFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78

Query: 212 V------NYLDSYLVGEE---------LWYTKPI--------EEPSNTTDEKTSTSSASP 248
           V        L  YL             L ++  +               D        S 
Sbjct: 79  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 138

Query: 249 LSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK 308
            +   +S       ++  + T    +    P  + +K  +  +        + E     +
Sbjct: 139 DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 198

Query: 309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA 368
             +           +  +  +  +    K +    +       + +  C   +   R S 
Sbjct: 199 VPYPR---------IPLKDVVPRVEKGYKMDA--PDGCPPAVYEVMKNCWHLDAAMRPSF 247

Query: 369 SLLLKH 374
             L + 
Sbjct: 248 LQLREQ 253

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 4e-22
 Identities = 29/121 (23%), Positives = 64/121 (52%), Gaps = 7/121 (5%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           S  + + +K +       +   + L+  EI ++   +H NI++  +S+   EEL ++ E+
Sbjct: 28  SSKKTYMAKFVKV-----KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82

Query: 72  LPGGSLTDVVTETC--MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK 129
           + G  + + +  +   ++E +I +   +V +AL+FLHS+ + H DI+ +NI+     S  
Sbjct: 83  ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142

Query: 130 L 130
           +
Sbjct: 143 I 143

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 2e-10
 Identities = 47/252 (18%), Positives = 89/252 (35%), Gaps = 38/252 (15%)

Query: 159 ASGTVYTAIESSTGME----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEEL 208
             G V+  +E+S+               + L+  EI ++   +H NI++  +S+   EEL
Sbjct: 17  EFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEEL 76

Query: 209 WNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSL---------IQP 259
             I  ++     G +++  + I   +   +E+   S    +      L         I+P
Sbjct: 77  VMIFEFIS----GLDIF--ERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRP 130

Query: 260 PPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHK-------WSFQ 312
                  R +    +        L    N     T       E             WS  
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLG 190

Query: 313 PHFLI----PYLFILSCRQALYLIATNKKPEIKEK--EKLSQIFQDFLDQCLEEEVETRA 366
               +       F+    Q +     N +    E+  +++S    DF+D+ L +E ++R 
Sbjct: 191 TLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM 250

Query: 367 SASLLLKHPFLK 378
           +AS  L+HP+LK
Sbjct: 251 TASEALQHPWLK 262

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 4e-22
 Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 22/151 (14%)

Query: 29  AQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------ 81
           A   ++E +++E+ V+     H NIVN L +  +G    V+ EY   G L + +      
Sbjct: 65  AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS 124

Query: 82  -------------TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSV 128
                         E  +D   + +   +V + + FL S   IHRD+ + NILL      
Sbjct: 125 FICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 184

Query: 129 KLSKWN--RFIATKLYIEISKVIIYCWDWTA 157
           K+  +   R I       +         W A
Sbjct: 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMA 215

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 6e-22
 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 8/135 (5%)

Query: 33  KKELIINEILVM-RENKHPNIVNYLDSY----LVGEELWVVMEYLPGGSLTDVVTE---T 84
                  E+ +  R ++ P+IV  +D Y       + L +VME L GG L   + +    
Sbjct: 47  DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 106

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIE 144
              E + + + + + +A+++LHS  + HRD+K +N+L        + K   F   K    
Sbjct: 107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166

Query: 145 ISKVIIYCWDWTAVA 159
            + +   C+    VA
Sbjct: 167 HNSLTTPCYTPYYVA 181

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 40/257 (15%), Positives = 73/257 (28%), Gaps = 41/257 (15%)

Query: 159 ASGTVYTAIESSTGME------PKKELIINEILVM-RENKHPNIVNYLDS---------- 201
            +G V       T  +              E+ +  R ++ P+IV  +D           
Sbjct: 24  INGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 83

Query: 202 ------YLVGEELWNIVNYLDSYLVGEE--LWYTKPI--------EEPSNTTDEKTST-- 243
                  L G EL++ +         E       K I               D K     
Sbjct: 84  LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 143

Query: 244 -SSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSL-PPPVVLDKNKNQTTPPTGLTGSIL 301
            +S  P +   L+       +T   S      T     P VL   K   +      G I+
Sbjct: 144 YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 203

Query: 302 EFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEE 361
             L      F  +  +     +  R    +     +    E  ++S+  +  +   L+ E
Sbjct: 204 YILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 259

Query: 362 VETRASASLLLKHPFLK 378
              R + +  + HP++ 
Sbjct: 260 PTQRMTITEFMNHPWIM 276

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 9e-22
 Identities = 21/102 (20%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTE---TCMDEG 89
             +  + E  +M++ +H  +V      +  E ++++ EY+  GSL D +       +   
Sbjct: 51  SPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN 109

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
           ++  +  ++ + + F+     IHRD+++ NIL+    S K++
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 23/257 (8%), Positives = 66/257 (25%), Gaps = 51/257 (19%)

Query: 159 ASGTVYTAIESSTGM---------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
             G V+    +                 +  + E  +M++ +H  +V      +  E ++
Sbjct: 25  QFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIY 83

Query: 210 NIVNYLDSYLVGEELWYTKPIEEPSNTT----------------------DEKTS----- 242
            I  Y+++  + + L     I+   N                        D + +     
Sbjct: 84  IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 143

Query: 243 TSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILE 302
            + +  ++   L+ +         R      +    P  +        +        + E
Sbjct: 144 DTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202

Query: 303 FLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEV 362
            +   +  +            +  + +  +    +      +   +     +  C +E  
Sbjct: 203 IVTHGRIPYPGM---------TNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERP 251

Query: 363 ETRASASLLLK--HPFL 377
           E R +   L      F 
Sbjct: 252 EDRPTFDYLRSVLEDFF 268

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 2e-21
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQ 90
            ++  I E  VM    H  +V           ++++ EY+  G L + + E        Q
Sbjct: 42  SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ 101

Query: 91  IAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +  +C++V +A+E+L S Q +HRD+ + N L+   G VK+S +
Sbjct: 102 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 144

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 25/244 (10%), Positives = 59/244 (24%), Gaps = 33/244 (13%)

Query: 159 ASGTVYTAIESSTGM---------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
             G V                      ++  I E  VM    H  +V           ++
Sbjct: 16  QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 75

Query: 210 NIVNYLDSYLVGEELWYTK-PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRS 268
            I  Y+ +  +   L   +   +        K    +   L +           +     
Sbjct: 76  IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND 135

Query: 269 TLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH--------FLIPYL 320
                ++       +  ++  ++  +      + +  P    +           F +   
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFP---VRWSPPEVLMYSKFSSKSDIWAFGVLMW 192

Query: 321 FILSCR----------QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASL 370
            I S            +    IA   +         S+     +  C  E+ + R +  +
Sbjct: 193 EIYSLGKMPYERFTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKI 250

Query: 371 LLKH 374
           LL +
Sbjct: 251 LLSN 254

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.7 bits (227), Expect = 2e-21
 Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 14/207 (6%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVV 68
            F   ++ F  K L   + L     +  ++ + ++    +HP + +   ++   E L+ V
Sbjct: 22  EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81

Query: 69  MEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           MEYL GG L   +      D  +      E++  L+FLHS  +++RD+K DNILL  DG 
Sbjct: 82  MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH 141

Query: 128 VKLSKWNRFIATKLYIEISKVIIYCWDWTA--VASGTVYTA-----------IESSTGME 174
           +K++ +       L    +       D+ A  +  G  Y              E   G  
Sbjct: 142 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201

Query: 175 PKKELIINEILVMRENKHPNIVNYLDS 201
           P       E+       +P    +L+ 
Sbjct: 202 PFHGQDEEELFHSIRMDNPFYPRWLEK 228

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 8e-06
 Identities = 36/248 (14%), Positives = 67/248 (27%), Gaps = 30/248 (12%)

Query: 159 ASGTVYTAIESSTG--------------MEPKKELIINEILVM-RENKHPNIVNYLDSYL 203
           + G V+ A    T               M+   E  + E  V+    +HP + +   ++ 
Sbjct: 14  SFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 73

Query: 204 VGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPS 263
             E L+ ++ YL+   +   +      +    T            L +  +        +
Sbjct: 74  TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 133

Query: 264 TPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSI-LEFLGPHK-------WSFQPHF 315
                  +  +              +T    G    I  E L   K       WSF    
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193

Query: 316 LIP----YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA-SL 370
                    F     + L+       P       L +  +D L +    E E R      
Sbjct: 194 YEMLIGQSPFHGQDEEELFHSIRMDNPFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGD 251

Query: 371 LLKHPFLK 378
           + +HP  +
Sbjct: 252 IRQHPLFR 259

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.2 bits (226), Expect = 3e-21
 Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 7/118 (5%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K ++     A + K+  + NEI V+ + KHPNIV   D Y  G  L+++M+ + GG L D
Sbjct: 40  KCIAKK---ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 96

Query: 80  VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKW 133
            + E     E   + +  +VL A+++LH   ++HRD+K +N+L      D  + +S +
Sbjct: 97  RIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDF 154

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.5 bits (154), Expect = 6e-12
 Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 40/254 (15%)

Query: 159 ASGTVYTAIESSTG------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           A   V  A +  T             +E K+  + NEI V+ + KHPNIV   D Y  G 
Sbjct: 21  AFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 80

Query: 207 ELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPP 266
            L+ I+  +    + + +       E   +        +   L    +           P
Sbjct: 81  HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD-----LKP 135

Query: 267 RSTLNGALTSLPPPVVLD----KNKNQTTPPTGLTGSILEFLGPHKWSFQPHF------- 315
            + L  +L      ++ D    K ++  +  +   G+   ++ P   + +P+        
Sbjct: 136 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT-PGYVAPEVLAQKPYSKAVDCWS 194

Query: 316 LIPYLFILSCRQALY-----------LIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
           +    +IL C    +           ++    + +    + +S   +DF+   +E++ E 
Sbjct: 195 IGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK 254

Query: 365 RASASLLLKHPFLK 378
           R +    L+HP++ 
Sbjct: 255 RFTCEQALQHPWIA 268

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.3 bits (226), Expect = 3e-21
 Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVV 68
           R   + R +  K+L   I +  + + E   +E L++    HP I+    ++   ++++++
Sbjct: 24  RSRHNGRYYAMKVLKKEIVVRLK-QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82

Query: 69  MEYLPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           M+Y+ GG L  ++ ++             EV  ALE+LHS  +I+RD+K +NILL  +G 
Sbjct: 83  MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH 142

Query: 128 VKLSKWN 134
           +K++ + 
Sbjct: 143 IKITDFG 149

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (115), Expect = 6e-07
 Identities = 33/259 (12%), Positives = 73/259 (28%), Gaps = 52/259 (20%)

Query: 159 ASGTVYTAIESSTGME--------------PKKELIINEILVMRENKHPNIVNYLDSYLV 204
           + G V+       G                 + E   +E L++    HP I+    ++  
Sbjct: 16  SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 75

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT--------------------DEKTSTS 244
            ++++ I++Y++   +   L  ++    P                        D K    
Sbjct: 76  AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENI 135

Query: 245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL 304
                    ++             TL G    + P VV  K  N  +      G ++  +
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEM 194

Query: 305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
                 F            +  +    I      E++     ++  +D L + +  ++  
Sbjct: 195 LAGYTPFYDS---------NTMKTYEKI---LNAELRFPPFFNEDVKDLLSRLITRDLSQ 242

Query: 365 R-----ASASLLLKHPFLK 378
           R          +  HP+ K
Sbjct: 243 RLGNLQNGTEDVKNHPWFK 261

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (224), Expect = 4e-21
 Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC--MDEGQI 91
           +   ++E  +M +  HPN+++          + ++ E++  GSL   + +        Q+
Sbjct: 71  RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL 130

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             + R +   +++L     +HRD+ + NIL+  +   K+S +
Sbjct: 131 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 172

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 0.003
 Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 15/73 (20%)

Query: 159 ASGTVYTAIESSTG---------------MEPKKELIINEILVMRENKHPNIVNYLDSYL 203
             G V +      G                E ++   ++E  +M +  HPN+++      
Sbjct: 38  EFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT 97

Query: 204 VGEELWNIVNYLD 216
               +  I  +++
Sbjct: 98  KSTPVMIITEFME 110

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 4e-21
 Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 25/130 (19%)

Query: 29  AQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------ 81
           A   ++E +++E+ +M +   H NIVN L +  +   ++++ EY   G L + +      
Sbjct: 79  ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREK 138

Query: 82  ------------------TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
                                 +    +     +V + +EFL     +HRD+ + N+L+ 
Sbjct: 139 FSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT 198

Query: 124 LDGSVKLSKW 133
               VK+  +
Sbjct: 199 HGKVVKICDF 208

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.4 bits (221), Expect = 7e-21
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET---CMDEG 89
           + E  + E  VM+E KHPN+V  L         +++ E++  G+L D + E     +   
Sbjct: 56  EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 115

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
            +  +  ++  A+E+L     IHRD+ + N L+G +  VK++ +
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 159

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.4 bits (99), Expect = 5e-05
 Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 10/85 (11%)

Query: 159 ASGTVYTAIESSTGME----------PKKELIINEILVMRENKHPNIVNYLDSYLVGEEL 208
             G VY  +     +            + E  + E  VM+E KHPN+V  L         
Sbjct: 29  QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 88

Query: 209 WNIVNYLDSYLVGEELWYTKPIEEP 233
           + I  ++    + + L      E  
Sbjct: 89  YIITEFMTYGNLLDYLRECNRQEVS 113

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 1e-20
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 7   IDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 66
             +     +    KIL N         K+ ++ E  VM++  +P IV  +      E   
Sbjct: 27  YYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIG-ICEAESWM 83

Query: 67  VVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           +VME    G L   + +   + +  I  +  +V   +++L  +  +HRD+ + N+LL   
Sbjct: 84  LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143

Query: 126 GSVKLSKW 133
              K+S +
Sbjct: 144 HYAKISDF 151

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 9e-07
 Identities = 28/258 (10%), Positives = 74/258 (28%), Gaps = 40/258 (15%)

Query: 159 ASGTVYTA---------------IESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYL 203
             GTV                  +++       K+ ++ E  VM++  +P IV  +    
Sbjct: 19  NFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-IC 77

Query: 204 VGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPS 263
             E    ++   +   + + L   + +++ +        +     L             +
Sbjct: 78  EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 137

Query: 264 TPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH--------F 315
               +     ++       L  ++N     T     + ++  P   ++           F
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-KWYAPECINYYKFSSKSDVWSF 196

Query: 316 LIPYLFILSCRQALY----------LIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR 365
            +      S  Q  Y          ++   ++          +   D ++ C   +VE R
Sbjct: 197 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENR 254

Query: 366 ASAS---LLLKHPFLKIA 380
              +   L L++ +  + 
Sbjct: 255 PGFAAVELRLRNYYYDVV 272

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.7 bits (217), Expect = 2e-20
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 10/131 (7%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV----GEE 64
             +          L +      +  ++    E  +++  +HPNIV + DS+       + 
Sbjct: 29  LDTETTVEVAWCELQDRKLTKSE--RQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 86

Query: 65  LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSN--QVIHRDIKSDNIL 121
           + +V E +  G+L   +     M    + + CR++L+ L+FLH+    +IHRD+K DNI 
Sbjct: 87  IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 146

Query: 122 L-GLDGSVKLS 131
           + G  GSVK+ 
Sbjct: 147 ITGPTGSVKIG 157

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 9/54 (16%), Positives = 20/54 (37%)

Query: 325 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
               +Y   T+        +      ++ ++ C+ +  + R S   LL H F +
Sbjct: 217 NAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 13/79 (16%)

Query: 159 ASGTVYTAIESSTGM-------------EPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
           +  TVY  +++ T +             + +++    E  +++  +HPNIV + DS+   
Sbjct: 21  SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80

Query: 206 EELWNIVNYLDSYLVGEEL 224
            +    +  +   +    L
Sbjct: 81  VKGKKCIVLVTELMTSGTL 99

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 4e-20
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTETC-- 85
                 +E  + E L MR+  HP+IV  +   +    +W++ME    G L   +      
Sbjct: 46  CTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS 104

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +D   +     ++  AL +L S + +HRDI + N+L+  +  VKL  +
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 29/246 (11%), Positives = 57/246 (23%), Gaps = 32/246 (13%)

Query: 159 ASGTVYTAIESSTG---------------MEPKKELIINEILVMRENKHPNIVNYLDSYL 203
             G V+  I  S                  +  +E  + E L MR+  HP+IV  +    
Sbjct: 19  QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 78

Query: 204 VGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPS 263
                  +       L          ++  S        +++ + L +           +
Sbjct: 79  ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 138

Query: 264 TPPRSTLN-----GALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP 318
               S          L+         K      P   +    + F      S    F + 
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198

Query: 319 YLFILSCR----------QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA 368
              IL               +  I   ++  +             + +C   +   R   
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRF 256

Query: 369 SLLLKH 374
           + L   
Sbjct: 257 TELKAQ 262

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 5e-20
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 17/124 (13%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSY----LVGEELWVVMEYLPGG 75
           KI S+     ++ +      EI      +H NI+ ++ +         +LW+V +Y   G
Sbjct: 32  KIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86

Query: 76  SLTDVVTETCMDEGQIAAVCREVLQALEFLHS--------NQVIHRDIKSDNILLGLDGS 127
           SL D +    +    +  +       L  LH           + HRD+KS NIL+  +G+
Sbjct: 87  SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 146

Query: 128 VKLS 131
             ++
Sbjct: 147 CCIA 150

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 11/74 (14%), Positives = 20/74 (27%), Gaps = 8/74 (10%)

Query: 159 ASGTVYTAIESST--------GMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWN 210
             G V+                 E +      EI      +H NI+ ++ +       W 
Sbjct: 15  RFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74

Query: 211 IVNYLDSYLVGEEL 224
            +  +  Y     L
Sbjct: 75  QLWLVSDYHEHGSL 88

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 8e-20
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 7/126 (5%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWV 67
            +  R   K +S       Q   +  + EI ++   +H NI+   D          +   
Sbjct: 31  VNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87

Query: 68  VMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGS 127
           ++ +L G  L  ++    +    I     ++L+ L+++HS  V+HRD+K  N+LL     
Sbjct: 88  LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD 147

Query: 128 VKLSKW 133
           +K+  +
Sbjct: 148 LKICDF 153

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 4e-07
 Identities = 43/280 (15%), Positives = 77/280 (27%), Gaps = 60/280 (21%)

Query: 159 ASGTVYTAIESSTG------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
           A G V +A ++                +   +  + EI ++   +H NI+   D      
Sbjct: 20  AYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79

Query: 207 ELWNIVNYLDSYLVG---EELWYTKPIEEPS--------------------NTTDEKTST 243
                  YL ++L+G    +L  T+ +                           D K S 
Sbjct: 80  IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 139

Query: 244 SSASPLSTPPLS------LIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLT 297
              +      +       +  P    T   +          P ++L+      +      
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 199

Query: 298 GSILEFLGPHKWSFQPH------------FLIPYLFILSCRQALYLIATNKKPEIKEKEK 345
           G IL  +  ++  F                  P    L+C   L           K K  
Sbjct: 200 GCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVP 259

Query: 346 LSQIF-------QDFLDQCLEEEVETRASASLLLKHPFLK 378
            +++F        D LD+ L      R      L HP+L+
Sbjct: 260 WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 299

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 8e-20
 Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 4/127 (3%)

Query: 5   VTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE 64
              D  S        K L  P  L+Q    +  I E+  M    H N++      L    
Sbjct: 27  GEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 84

Query: 65  LWVVMEYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
           + +V E  P GSL D +   +     G ++    +V + + +L S + IHRD+ + N+LL
Sbjct: 85  MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL 144

Query: 123 GLDGSVK 129
                VK
Sbjct: 145 ATRDLVK 151

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 1e-19
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           KI     + A+       + EI +++E  HPNI+  LD++     + +V +++       
Sbjct: 30  KIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVI 89

Query: 80  VVT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
           +      +    I A     LQ LE+LH + ++HRD+K +N+LL  +G +KL+ +
Sbjct: 90  IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADF 144

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 7/57 (12%), Positives = 14/57 (24%)

Query: 322 ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           + S    +   +    P             D +          R +A+  LK  +  
Sbjct: 228 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 16/76 (21%)

Query: 159 ASGTVYTAIESSTG----------------MEPKKELIINEILVMRENKHPNIVNYLDSY 202
              TVY A + +T                  +      + EI +++E  HPNI+  LD++
Sbjct: 10  QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF 69

Query: 203 LVGEELWNIVNYLDSY 218
                +  + +++++ 
Sbjct: 70  GHKSNISLVFDFMETD 85

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 2e-19
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------- 81
           A   ++   +NE  VM+E    ++V  L     G+   V+ME +  G L   +       
Sbjct: 62  ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAM 121

Query: 82  ----TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
                       ++  +  E+   + +L++N+ +HRD+ + N ++  D +VK+  +
Sbjct: 122 ANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 177

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 9e-06
 Identities = 26/278 (9%), Positives = 63/278 (22%), Gaps = 69/278 (24%)

Query: 159 ASGTVYTAIESSTGMEPKKELI-----------------INEILVMRENKHPNIVNYLDS 201
           + G VY  +      +  +  +                 +NE  VM+E    ++V  L  
Sbjct: 32  SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 91

Query: 202 YLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE---------------------- 239
              G+    I+  +    +   L   +P    +                           
Sbjct: 92  VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA 151

Query: 240 --------KTSTSSASP-----LSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN 286
                          +      +    ++                  +  + P  + D  
Sbjct: 152 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV 211

Query: 287 KNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKL 346
               +        + E     +  +Q          LS  Q L  +      +    +  
Sbjct: 212 FTTYSDVWSFGVVLWEIATLAEQPYQG---------LSNEQVLRFVMEGGLLDK--PDNC 260

Query: 347 SQIFQDFLDQCLEEEVETRASASLLLK------HPFLK 378
             +  + +  C +   + R S   ++        P  +
Sbjct: 261 PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 298

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 2e-19
 Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 19/143 (13%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWV 67
           R   D  R  + I       ++   ++    E+ V+ +   HPNI+N L +      L++
Sbjct: 30  RIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNIINLLGACEHRGYLYL 88

Query: 68  VMEYLPGGSLTDVVTETC-----------------MDEGQIAAVCREVLQALEFLHSNQV 110
            +EY P G+L D + ++                  +   Q+     +V + +++L   Q 
Sbjct: 89  AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 148

Query: 111 IHRDIKSDNILLGLDGSVKLSKW 133
           IHRD+ + NIL+G +   K++ +
Sbjct: 149 IHRDLAARNILVGENYVAKIADF 171

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 6e-05
 Identities = 37/260 (14%), Positives = 69/260 (26%), Gaps = 46/260 (17%)

Query: 159 ASGTVYTAIESSTG--------------MEPKKELIINEILVMRE-NKHPNIVNYLDSYL 203
             G V  A     G               +        E+ V+ +   HPNI+N L +  
Sbjct: 22  NFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 81

Query: 204 VGEELWNIVNY-----LDSYLVGEELWYTKPIEEPSNTT----DEKTSTSSASPLSTPPL 254
               L+  + Y     L  +L    +  T P    +N+T      +     A+ ++    
Sbjct: 82  HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 141

Query: 255 SLIQPP-------PPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH 307
            L Q           +          +         +    +T     +    +E L   
Sbjct: 142 YLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS 201

Query: 308 K-------WSFQPHFLI------PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 354
                   WS+                 ++C +    +    + E            D +
Sbjct: 202 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVYDLM 259

Query: 355 DQCLEEEVETRASASLLLKH 374
            QC  E+   R S + +L  
Sbjct: 260 RQCWREKPYERPSFAQILVS 279

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 4e-19
 Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV---TETCMDEG 89
             E  + E  VM++ +H  +V      +  E +++V EY+  GSL D +   T   +   
Sbjct: 55  SPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 113

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN 134
           Q+  +  ++   + ++     +HRD+++ NIL+G +   K++ + 
Sbjct: 114 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 158

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 34/259 (13%), Positives = 69/259 (26%), Gaps = 45/259 (17%)

Query: 159 ASGTVYTAIESSTGM---------EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW 209
             G V+    + T               E  + E  VM++ +H  +V      +  E ++
Sbjct: 29  CFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIY 87

Query: 210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRST 269
            +  Y+      +         E             A+ +++  ++ ++           
Sbjct: 88  IVTEYMS-----KGSLLDFLKGETGKYLRLPQLVDMAAQIAS-GMAYVERMNYVHRDLRA 141

Query: 270 LNGALTSLPPPVVLD------KNKNQTTPPTGLTGSILEFLGPHK------------WSF 311
            N  +       V D         N+ T   G    I ++  P              WSF
Sbjct: 142 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYGRFTIKSDVWSF 200

Query: 312 QPHFLI------PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETR 365
                            +  R+ L  +    +       +  +   D + QC  +E E R
Sbjct: 201 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEER 258

Query: 366 ASASLLLK--HPFLKIARP 382
            +   L      +     P
Sbjct: 259 PTFEYLQAFLEDYFTSTEP 277

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 83.6 bits (206), Expect = 7e-19
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYL----VGEELWV 67
              R    K+L                 E        HP IV   D+       G   ++
Sbjct: 30  RLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 88

Query: 68  VMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
           VMEY+ G +L D+V     M   +   V  +  QAL F H N +IHRD+K  NI++    
Sbjct: 89  VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 148

Query: 127 SVKLSKWNRF 136
           +VK+  +   
Sbjct: 149 AVKVMDFGIA 158

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 32/267 (11%), Positives = 64/267 (23%), Gaps = 53/267 (19%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYL- 203
               V+ A +                            E        HP IV   D+   
Sbjct: 19  GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78

Query: 204 ---VGEELWNIVNYLDSYLVGEELWYTKPIEEPS--------------------NTTDEK 240
               G   + ++ Y+D   + + +    P+                           D K
Sbjct: 79  ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVK 138

Query: 241 TSTSSASPLSTPPLSL------IQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT 294
            +    S  +   +        I     S    + + G    L P      + +  +   
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198

Query: 295 GLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 354
            L   + E L             P+        A   +  +  P     E LS      +
Sbjct: 199 SLGCVLYEVLTGEP---------PFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVV 249

Query: 355 DQCLEEEVETRASASLLLKHPFLKIAR 381
            + L +  E R   +  ++   +++  
Sbjct: 250 LKALAKNPENRYQTAAEMRADLVRVHN 276

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.1 bits (207), Expect = 7e-19
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 28  LAQQPKKELIINEILVMRENKHPN-IVNYLDSYLVGEELWVVMEYLPGGSLTDV-VTETC 85
              + K   +  E  + +  +    I         G+   +VME L              
Sbjct: 40  ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK 99

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEI 145
                +  +  +++  +E++HS   IHRD+K DN L+GL     L     F   K Y + 
Sbjct: 100 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159

Query: 146 SKVIIYCWDWTAVASGTV-YTAIESSTGME 174
                  +      +GT  Y +I +  G+E
Sbjct: 160 RTHQHIPYRENKNLTGTARYASINTHLGIE 189

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 7e-19
 Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 19/206 (9%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
           +  R +  KIL   + +A+  +    + E  V++  +HP +     ++   + L  VMEY
Sbjct: 28  ATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86

Query: 72  LPGGSLTDVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
             GG L   ++      E +      E++ ALE+LHS  V++RDIK +N++L  DG +K+
Sbjct: 87  ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146

Query: 131 SKWNRFIATKLYIEISKVIIYC----WDWTAVASGTVYTA-----------IESSTGMEP 175
           + +   +  +   + + +  +C    +    V     Y              E   G  P
Sbjct: 147 TDFG--LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

Query: 176 KKELIINEILVMRENKHPNIVNYLDS 201
                   +  +   +       L  
Sbjct: 205 FYNQDHERLFELILMEEIRFPRTLSP 230

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 6e-04
 Identities = 37/261 (14%), Positives = 73/261 (27%), Gaps = 53/261 (20%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
             G V    E +TG               + +    + E  V++  +HP +     ++  
Sbjct: 17  TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPST 264
            + L  ++ Y +             +      T+E+     A  +S    +L        
Sbjct: 77  HDRLCFVMEYANGG------ELFFHLSRERVFTEERARFYGAEIVS----ALEYLHSRDV 126

Query: 265 PPR--STLNGALTSLPPPVVLD----KNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP 318
             R     N  L       + D    K                E+L P       +    
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186

Query: 319 YLFILSCRQALYLIATNKKP----------------EIKEKEKLSQIFQDFLDQCLEEEV 362
             + L     +Y +   + P                EI+    LS   +  L   L+++ 
Sbjct: 187 DWWGLGV--VMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP 244

Query: 363 ETR-----ASASLLLKHPFLK 378
           + R     + A  +++H F  
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.0 bits (204), Expect = 2e-18
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 25/128 (19%)

Query: 29  AQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV------- 81
           A    +     E  +M E  +PNIV  L    VG+ + ++ EY+  G L + +       
Sbjct: 55  ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHT 114

Query: 82  ------------------TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG 123
                                 +   +   + R+V   + +L   + +HRD+ + N L+G
Sbjct: 115 VCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG 174

Query: 124 LDGSVKLS 131
            +  VK++
Sbjct: 175 ENMVVKIA 182

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 4e-18
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K L    T   + ++   + E  +M +  H NI+         + + ++ EY+  G+L  
Sbjct: 42  KTLKAGYT---EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 98

Query: 80  VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLS 131
            + E        Q+  + R +   +++L +   +HRD+ + NIL+  +   K+S
Sbjct: 99  FLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS 152

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 52/271 (19%)

Query: 159 ASGTVYTAIESSTG----------------MEPKKELIINEILVMRENKHPNIVNYLDSY 202
             G VY  +  ++                  E ++   + E  +M +  H NI+      
Sbjct: 19  EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 78

Query: 203 LVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPP-- 260
              + +  I  Y+++          K + E                ++     L      
Sbjct: 79  SKYKPMMIITEYMENG------ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 132

Query: 261 -----PPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH- 314
                  +    S L   ++      VL+ +   T   +G    I  +  P   S++   
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI-RWTAPEAISYRKFT 191

Query: 315 -----------------FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQC 357
                            +     + LS  + +  I    +                + QC
Sbjct: 192 SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC--PSAIYQLMMQC 249

Query: 358 LEEEVETRASASLLLK--HPFLKIARPLASL 386
            ++E   R   + ++      ++    L +L
Sbjct: 250 WQQERARRPKFADIVSILDKLIRAPDSLKTL 280

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 4e-18
 Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 19/134 (14%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD 79
           K+L +  T  ++   +LI    ++    KH NI+N L +      L+V++EY   G+L +
Sbjct: 51  KMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 108

Query: 80  VV-----------------TETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILL 122
            +                  E  +    + +   +V + +E+L S + IHRD+ + N+L+
Sbjct: 109 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 168

Query: 123 GLDGSVKLSKWNRF 136
             D  +K++ +   
Sbjct: 169 TEDNVMKIADFGLA 182

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 8e-18
 Identities = 24/125 (19%), Positives = 56/125 (44%), Gaps = 4/125 (3%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPK-KELIINEILVMRENKHPNIVNYLDSYLVGEELWV 67
            +  +  +    +    +  A  PK  + I++E  VM    +P++   L    +   + +
Sbjct: 29  LWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLTSTVQL 87

Query: 68  VMEYLPGGSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           + + +P G L D V E    +    +   C ++ + + +L   +++HRD+ + N+L+   
Sbjct: 88  ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP 147

Query: 126 GSVKL 130
             VK+
Sbjct: 148 QHVKI 152

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 9e-18
 Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 3/124 (2%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPK--KELIINEILVMRENKHPNIVNYLDSYLVGEELW 66
           R  S   ++ +K +    T + +    +E I  E+ +++E +HPN++   + Y    ++ 
Sbjct: 30  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89

Query: 67  VVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           +++E + GG L D + E   + E +     +++L  + +LHS Q+ H D+K +NI+L   
Sbjct: 90  LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149

Query: 126 GSVK 129
              K
Sbjct: 150 NVPK 153

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 1e-09
 Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 60/267 (22%)

Query: 159 ASGTVYTAIESSTGME-----------------PKKELIINEILVMRENKHPNIVNYLDS 201
               V    E STG++                   +E I  E+ +++E +HPN++   + 
Sbjct: 22  QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 81

Query: 202 YLVGEELWNIVNYLDSYLVGEELWYTKPIEE----------------------------P 233
           Y    ++  I+  +    + + L   + + E                            P
Sbjct: 82  YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKP 141

Query: 234 SNTT-DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTP 292
            N    ++        +    L+              + G    + P +V  +       
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEAD 198

Query: 293 PTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLI-ATNKKPEIKEKEKLSQIFQ 351
              + G I   L      F            + ++ L  + A N + E +     S + +
Sbjct: 199 MWSI-GVITYILLSGASPFLGD---------TKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 352 DFLDQCLEEEVETRASASLLLKHPFLK 378
           DF+ + L ++ + R +    L+HP++K
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 80.3 bits (197), Expect = 1e-17
 Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV-VTETCMDEGQIA 92
               I EI +++E KH NIV   D     + L +V E+L       + V E  ++     
Sbjct: 44  PSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK 103

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLYIEISKVII 150
           +   ++L  + + H  +V+HRD+K  N+L+  +G +K++ +   R     +     +++ 
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT 163

Query: 151 YCWDWTAVASGTVY 164
             +    V  G+  
Sbjct: 164 LWYRAPDVLMGSKK 177

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 336 KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
             P     + L +   D L + L+ +   R +A   L+H + K
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.2 bits (85), Expect = 0.002
 Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 12/87 (13%)

Query: 159 ASGTVYTA------------IESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGE 206
             G VY A            I      E      I EI +++E KH NIV   D     +
Sbjct: 14  TYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK 73

Query: 207 ELWNIVNYLDSYLVGEELWYTKPIEEP 233
            L  +  +LD  L          +E  
Sbjct: 74  RLVLVFEHLDQDLKKLLDVCEGGLESV 100

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.6 bits (198), Expect = 2e-17
 Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 2/123 (1%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEY 71
                +  KIL +   + +  + E  +NE  +++    P +V    S+     L++VMEY
Sbjct: 64  ESGNHYAMKIL-DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122

Query: 72  LPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
           + GG +   +       E        +++   E+LHS  +I+RD+K +N+L+   G +++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182

Query: 131 SKW 133
           + +
Sbjct: 183 TDF 185

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.1 bits (98), Expect = 8e-05
 Identities = 36/259 (13%), Positives = 69/259 (26%), Gaps = 52/259 (20%)

Query: 159 ASGTVYTAIESSTGM--------------EPKKELIINEILVMRENKHPNIVNYLDSYLV 204
           + G V       +G                 + E  +NE  +++    P +V    S+  
Sbjct: 53  SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112

Query: 205 GEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT--------------------DEKTSTS 244
              L+ ++ Y+    +   L       EP                        D K    
Sbjct: 113 NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172

Query: 245 SASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFL 304
                    ++             TL G   +L P ++L K  N+      L   I E  
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 305 GPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVET 364
                +  P F           Q + +       +++     S   +D L   L+ ++  
Sbjct: 233 -----AGYPPF--------FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTK 279

Query: 365 R-----ASASLLLKHPFLK 378
           R        + +  H +  
Sbjct: 280 RFGNLKNGVNDIKNHKWFA 298

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 2e-17
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 13/157 (8%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRE---NKHPNIVNYLDSYLVGEE-----LWVVMEY 71
           K +   +   ++      I E+ V+R     +HPN+V   D   V        L +V E+
Sbjct: 39  KRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH 96

Query: 72  LPGGSLT--DVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK 129
           +     T  D V E  +    I  +  ++L+ L+FLHS++V+HRD+K  NIL+   G +K
Sbjct: 97  VDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 156

Query: 130 LSKWNRFIATKLYIEISKVII-YCWDWTAVASGTVYT 165
           L+ +         + ++ V++   +    V   + Y 
Sbjct: 157 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 193

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 6e-05
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 335 NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           + +P  K    + ++ +D L +CL      R SA   L HP+ +
Sbjct: 254 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 4e-17
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 33  KKELIINEILVMRENKHPNIVNYLDSYLVGEE------LWVVMEYLPGGSLTDV----VT 82
            K     E+ +MR+  H NIV     +    E      L +V++Y+P             
Sbjct: 56  DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115

Query: 83  ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY 142
           +  +    +     ++ ++L ++HS  + HRDIK  N+LL  D +V   K   F + K  
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL--KLCDFGSAKQL 173

Query: 143 IEISKVIIYCWDW 155
           +     + Y    
Sbjct: 174 VRGEPNVSYICSR 186

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 10/71 (14%)

Query: 159 ASGTVYTAIESSTG-------MEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNI 211
           + G VY A    +G       +   K     E+ +MR+  H NIV     +    E  + 
Sbjct: 32  SFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 91

Query: 212 VNYLDSYLVGE 222
           V      LV +
Sbjct: 92  VYL---NLVLD 99

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 4e-17
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 20/132 (15%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPGGSLT 78
           K+L    T      + L+    +++    H N+VN L +    G  L V++E+   G+L+
Sbjct: 49  KMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 106

Query: 79  DV-----------------VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNIL 121
                              + +  +    +     +V + +EFL S + IHRD+ + NIL
Sbjct: 107 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 166

Query: 122 LGLDGSVKLSKW 133
           L     VK+  +
Sbjct: 167 LSEKNVVKICDF 178

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 5e-17
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 4/135 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT--DVVTETCMDEGQI 91
               I EI +++E  HPNIV  LD      +L++V E+L        D    T +    I
Sbjct: 45  PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLI 104

Query: 92  AAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN--RFIATKLYIEISKVI 149
            +   ++LQ L F HS++V+HRD+K  N+L+  +G++KL+ +   R     +     +V+
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164

Query: 150 IYCWDWTAVASGTVY 164
              +    +  G  Y
Sbjct: 165 TLWYRAPEILLGCKY 179

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 1e-04
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 336 KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK-IARPLASL 386
           ++   K    L +  +  L Q L  +   R SA   L HPF + + +P+  L
Sbjct: 245 RQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 13/74 (17%)

Query: 159 ASGTVYTAIESSTG-------------MEPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
             G VY A    TG              E      I EI +++E  HPNIV  LD     
Sbjct: 14  TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73

Query: 206 EELWNIVNYLDSYL 219
            +L+ +  +L   L
Sbjct: 74  NKLYLVFEFLHQDL 87

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 1e-16
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE-ELWVVMEYLPGGSLTDVVT--ET 84
           +    +    + E ++M++  HPN+++ L   L  E    VV+ Y+  G L + +     
Sbjct: 66  ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 125

Query: 85  CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
                 +     +V + ++FL S + +HRD+ + N +L    +VK++ +
Sbjct: 126 NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 174

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.9 bits (188), Expect = 2e-16
 Identities = 36/267 (13%), Positives = 83/267 (31%), Gaps = 26/267 (9%)

Query: 9   RFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEE---- 64
           R     ++   K +   +   ++      + EI +++  KH N+VN ++           
Sbjct: 30  RHRKTGQKVALKKVL--MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87

Query: 65  ----LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDN 119
               +++V ++        +          +I  V + +L  L ++H N+++HRD+K+ N
Sbjct: 88  CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN 147

Query: 120 ILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKEL 179
           +L+  DG +KL+ +       L    S       +       T++             EL
Sbjct: 148 VLITRDGVLKLADF------GLARAFSLAKNSQPNRYTNRVVTLWYRP---------PEL 192

Query: 180 IINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDE 239
           ++ E               +        +           +  +L  +   E   N  + 
Sbjct: 193 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY 252

Query: 240 KTSTSSASPLSTPPLSLIQPPPPSTPP 266
           +                 +       P
Sbjct: 253 ELYEKLELVKGQKRKVKDRLKAYVRDP 279

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 8/44 (18%), Positives = 14/44 (31%)

Query: 335 NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
            K  +  +         D +D+ L  +   R  +   L H F  
Sbjct: 266 RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 309

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 76.8 bits (188), Expect = 3e-16
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 33  KKELIINEILVMRE-NKHPNIVNYLDSYL--VGEELWVVMEYLPGGSLTDVVTETCMDEG 89
           KK+ I  EI ++      PNI+   D     V     +V E++       +     + + 
Sbjct: 72  KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--TLTDY 129

Query: 90  QIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKW 133
            I     E+L+AL++ HS  ++HRD+K  N+++  +   ++L  W
Sbjct: 130 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW 174

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 7e-08
 Identities = 43/282 (15%), Positives = 81/282 (28%), Gaps = 67/282 (23%)

Query: 159 ASGTVYTAIESSTGME--------PKKELIINEILVMRE-NKHPNIVNYLDS-------- 201
               V+ AI  +   +         KK+ I  EI ++      PNI+   D         
Sbjct: 47  KYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106

Query: 202 -YLVGEELWN--------------IVNYLDSYLVGEELWYTKPIEE----PSN------- 235
             LV E + N              I  Y+   L   +  ++  I      P N       
Sbjct: 107 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 166

Query: 236 --------------TTDEKTSTSSASPLSTPPLSLIQPPPPSTP-----PRSTLNGALTS 276
                            ++ +   AS     P  L+                 L   +  
Sbjct: 167 RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226

Query: 277 LPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNK 336
             P      N +Q      + G+   +    K++ +       +     R+        +
Sbjct: 227 KEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW-----ER 281

Query: 337 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
               + +  +S    DFLD+ L  + ++R +A   ++HP+  
Sbjct: 282 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 3e-16
 Identities = 29/152 (19%), Positives = 68/152 (44%), Gaps = 11/152 (7%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE------EL 65
               +   K L  P     +   +    E+ +++  +H N++  LD +   E      + 
Sbjct: 41  RTGAKVAIKKLYRP--FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 98

Query: 66  WVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           ++VM ++ G  L  ++    + E +I  +  ++L+ L ++H+  +IHRD+K  N+ +  D
Sbjct: 99  YLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED 157

Query: 126 GSVKLSKWNRFIATKLYIEISKVIIYCWDWTA 157
             +K    +  +A +   E++  ++  W    
Sbjct: 158 CELK--ILDFGLARQADSEMTGYVVTRWYRAP 187

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 2e-10
 Identities = 43/279 (15%), Positives = 86/279 (30%), Gaps = 62/279 (22%)

Query: 159 ASGTVYTAIESSTGM-------------EPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
           A G V +A++  TG              E   +    E+ +++  +H N++  LD +   
Sbjct: 30  AYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 89

Query: 206 EELWNIVNYLDSYLVGE-------ELWYTKPIEEP--------------------SNTTD 238
           E L +  ++   YLV         +L   + + E                         D
Sbjct: 90  ETLDDFTDF---YLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD 146

Query: 239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTG 298
            K    + +      +        +    +          P V+L+  +   T      G
Sbjct: 147 LKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206

Query: 299 SILEFLGPHKWSFQPH-------------FLIPYLFILSCRQALYLIATNKKPEIKEKE- 344
            I+  +   K  F+                  P  F+   +           PE+++K+ 
Sbjct: 207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF 266

Query: 345 -----KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
                  S +  + L++ L  + E R +A   L HP+ +
Sbjct: 267 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 5e-16
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 2/116 (1%)

Query: 20  KILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT 78
           K+L     + +    E    E  V+    + P +V    ++    +L ++++Y+ GG L 
Sbjct: 58  KVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF 117

Query: 79  DVVTETC-MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKW 133
             +++     E ++     E++ ALE LH   +I+RDIK +NILL  +G V L+ +
Sbjct: 118 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF 173

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (183), Expect = 8e-16
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 34  KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVT-ETCMDEGQIA 92
               + EI +++E KH NIV   D     ++L +V E+          +    +D   + 
Sbjct: 45  PSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK 104

Query: 93  AVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC 152
           +   ++L+ L F HS  V+HRD+K  N+L+  +G +KL+ +   +A    I +       
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFG--LARAFGIPVRCYSAEV 162

Query: 153 WDW 155
              
Sbjct: 163 VTL 165

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 5e-05
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 330 YLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 382
           Y +       +    KL+   +D L   L+     R SA   L+HP+     P
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP 291

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.003
 Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 13/88 (14%)

Query: 159 ASGTVYTAIESSTGM-------------EPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
             GTV+ A    T               E      + EI +++E KH NIV   D     
Sbjct: 14  TYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73

Query: 206 EELWNIVNYLDSYLVGEELWYTKPIEEP 233
           ++L  +  + D  L          ++  
Sbjct: 74  KKLTLVFEFCDQDLKKYFDSCNGDLDPE 101

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (185), Expect = 9e-16
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 10/124 (8%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV------GEEL 65
             DR    K LS P     Q   +    E+++M+   H NI++ L+ +         +++
Sbjct: 40  VLDRNVAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 97

Query: 66  WVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           ++VME +       +  +  +D  +++ +  ++L  ++ LHS  +IHRD+K  NI++  D
Sbjct: 98  YLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155

Query: 126 GSVK 129
            ++K
Sbjct: 156 CTLK 159

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 1e-05
 Identities = 31/298 (10%), Positives = 74/298 (24%), Gaps = 67/298 (22%)

Query: 159 ASGTVYTAIESSTGM-------------EPKKELIINEILVMRENKHPNIVNYLDSYLVG 205
           A G V  A ++                 +   +    E+++M+   H NI++ L+ +   
Sbjct: 29  AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88

Query: 206 EELWN-----IVNYLDSYLVGEELWYTKPIEE--------------------------PS 234
           + L       +V  L    + + +      E                           PS
Sbjct: 89  KTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 148

Query: 235 NTTDEKTSTS-------SASPLSTPPLSLIQPPPPSTPPRSTLNGA-------------- 273
           N   +   T        + +  ++  ++          P   L                 
Sbjct: 149 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208

Query: 274 --LTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYL 331
             +             +Q        G+              +++               
Sbjct: 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLF 268

Query: 332 IATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 389
             +    + +  +  +   +D L + L  +   R S    L+HP++ +    A +   
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 326

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 1e-15
 Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 7/129 (5%)

Query: 12  SDDRRFFSKILSNP--ITLAQQPKKELIINEILVMRE--NKHPNIVNYLDSYLVGEELWV 67
           SD+     K +         + P    +  E++++++  +    ++  LD +   +   +
Sbjct: 27  SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 86

Query: 68  VMEYLPGGSLTD--VVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD 125
           ++E           +     + E    +   +VL+A+   H+  V+HRDIK +NIL+ L+
Sbjct: 87  ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN 146

Query: 126 -GSVKLSKW 133
            G +KL  +
Sbjct: 147 RGELKLIDF 155

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 7e-07
 Identities = 28/252 (11%), Positives = 71/252 (28%), Gaps = 40/252 (15%)

Query: 159 ASGTVYTAIESSTGME-----------------PKKELIINEILVMRE--NKHPNIVNYL 199
             G+VY+ I  S  +                  P    +  E++++++  +    ++  L
Sbjct: 16  GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75

Query: 200 DSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQP 259
           D +   +    I+   +      +    +          E+ + S    +          
Sbjct: 76  DWFERPDSFVLILERPEPVQDLFDFITER------GALQEELARSFFWQVLEAVRHCHNC 129

Query: 260 P---PPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL 316
                        ++     L           + T  T   G+   +  P    +  +  
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTR-VYSPPEWIRYHRYHG 188

Query: 317 IPYLFILSCRQALYLIATNKKP----------EIKEKEKLSQIFQDFLDQCLEEEVETRA 366
                + S    LY +     P          ++  ++++S   Q  +  CL      R 
Sbjct: 189 RSA-AVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 247

Query: 367 SASLLLKHPFLK 378
           +   +  HP+++
Sbjct: 248 TFEEIQNHPWMQ 259

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 2e-15
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 7/123 (5%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW----- 66
               R   K LS P       K+     E+ +++  KH N++  LD +     L      
Sbjct: 41  KTGLRVAVKKLSRPFQSIIHAKR--TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 98

Query: 67  VVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG 126
            ++ +L G  L ++V    + +  +  +  ++L+ L+++HS  +IHRD+K  N+ +  D 
Sbjct: 99  YLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158

Query: 127 SVK 129
            +K
Sbjct: 159 ELK 161

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-07
 Identities = 32/276 (11%), Positives = 68/276 (24%), Gaps = 56/276 (20%)

Query: 159 ASGTVYTAIESSTGME-------------PKKELIINEILVMRENKHPNIVNYLDSYLVG 205
           A G+V  A ++ TG+                 +    E+ +++  KH N++  LD +   
Sbjct: 30  AYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 89

Query: 206 EELWNIVNYLDSYLVGEELWYTKPIEEPSNTT------------------------DEKT 241
             L    +      +           +                             D K 
Sbjct: 90  RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149

Query: 242 STSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQT---------TP 292
           S  + +      +        +    +          P ++L+                 
Sbjct: 150 SNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209

Query: 293 PTGLTG----------SILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKE 342
              LTG            L+ +     +     L       +      L    K      
Sbjct: 210 AELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV 269

Query: 343 KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
               + +  D L++ L  + + R +A+  L H +  
Sbjct: 270 FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 305

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 72.1 bits (176), Expect = 8e-15
 Identities = 24/154 (15%), Positives = 58/154 (37%), Gaps = 9/154 (5%)

Query: 28  LAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVVTET--C 85
             ++     + +E    +       +  +  +       V++  L G SL D++      
Sbjct: 38  EPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK 97

Query: 86  MDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-----DGSVKLSKWNRFIATK 140
                +A   +++L  ++ +H   +++RDIK DN L+G         + +  +   +   
Sbjct: 98  FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG--MVKF 155

Query: 141 LYIEISKVIIYCWDWTAVASGTVYTAIESSTGME 174
               ++K  I   +   ++    Y +I +  G E
Sbjct: 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE 189

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 55.9 bits (134), Expect = 6e-10
 Identities = 13/120 (10%), Positives = 35/120 (29%), Gaps = 14/120 (11%)

Query: 14  DRRFFSKILSNPITLAQQPKKELIINEIL---VMRENKHPNIVNYLDSYLVGEELWVVME 70
               F K+               I +       +++ +   +          E   V+ME
Sbjct: 35  GHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW----EGNAVLME 90

Query: 71  YLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKL 130
            +             +       V   +L+ +   +   ++H D+   N+L+  +  + +
Sbjct: 91  LIDAK------ELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWI 143

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.2 bits (108), Expect = 4e-06
 Identities = 27/189 (14%), Positives = 61/189 (32%), Gaps = 19/189 (10%)

Query: 12  SDDRRFFSKILSNPITLAQQPKKELII------NEILVMRENKHPNIVNYLDSYLV---- 61
            ++     KI+       +  + E+ +       +          +I+  LD +      
Sbjct: 36  VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN 95

Query: 62  GEELWVVMEYLPGGSLTDV--VTETCMDEGQIAAVCREVLQALEFLHSNQ-VIHRDIKSD 118
           G  + +V E L    L  +       +    +  + +++L  L+++H    +IH DIK +
Sbjct: 96  GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155

Query: 119 NILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKE 178
           N+L+ +            +      ++     Y   +T       Y + E   G      
Sbjct: 156 NVLMEIVD------SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCG 209

Query: 179 LIINEILVM 187
             I     +
Sbjct: 210 ADIWSTACL 218

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 1e-04
 Identities = 19/95 (20%), Positives = 36/95 (37%)

Query: 284 DKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEK 343
            K+ +       L G +  +L  +    +  F    L     +   + +      + K  
Sbjct: 238 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS 297

Query: 344 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 378
           +  ++   DFL   L+ +   RA A  L+ HP+LK
Sbjct: 298 KDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	400
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.72
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.47
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	96.82
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	96.77
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	96.73
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	96.69
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	96.69
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.47
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	96.44
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	96.43
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	96.42
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	96.4
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	96.39
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	96.39
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	96.35
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	96.33
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	96.28
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	96.22
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	96.2
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.19
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.11
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	96.08
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	96.04
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	95.99
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	95.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	95.82
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	95.8
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	95.78
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	95.77
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	95.73
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	95.69
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	95.28
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	95.2
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	94.67
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	94.67
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	94.65
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	94.55
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	94.5
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	94.31
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	94.3
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	94.27
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	94.17
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	94.15
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	94.03
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	94.02
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	93.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	93.84
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	93.73
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	93.58
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	93.56
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	93.54
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	93.12
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	92.77
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	92.71
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	92.24
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	92.11
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.05
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	92.03
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	91.67
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	91.12
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	91.04
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	90.56
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	90.14
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	89.94
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	89.39
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	88.66
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	87.88
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	87.12
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	85.48

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-54  Score=406.40  Aligned_cols=265  Identities=60%  Similarity=0.873  Sum_probs=238.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|.+........+.+.+|+.++++++|+||++++++|.+++.+|+|||||++++|.++
T Consensus        28 iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~  107 (293)
T d1yhwa1          28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  107 (293)
T ss_dssp             CCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred             EecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHH
Confidence            79999999999999988999999998776666678899999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccc
Q psy9736          81 VTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVAS  160 (400)
Q Consensus        81 i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
                      +.++.+++..++.++.||+.||.|||++||+||||||+||+++.+|.++|+|||  ++..+....               
T Consensus       108 ~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG--~a~~~~~~~---------------  170 (293)
T d1yhwa1         108 VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--FCAQITPEQ---------------  170 (293)
T ss_dssp             HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECCSTT---------------
T ss_pred             hhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccch--hheeecccc---------------
Confidence            988899999999999999999999999999999999999999999999999999  443111100               


Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTDEK  240 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  240 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (293)
T d1yhwa1         171 --------------------------------------------------------------------------------  170 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccCcc
Q psy9736         241 TSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIPYL  320 (400)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~  320 (400)
                                              ......+||+.|+|||++.+..++..+|+||+|+++|+|++|..         ||.
T Consensus       171 ------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~---------Pf~  217 (293)
T d1yhwa1         171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---------PYL  217 (293)
T ss_dssp             ------------------------CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSC---------TTT
T ss_pred             ------------------------ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCC---------CCC
Confidence                                    01234479999999999999988899999999999999999987         887


Q ss_pred             hhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhhHHH
Q psy9736         321 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA  396 (400)
Q Consensus       321 ~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~~~~  396 (400)
                      . .+..+.+..+.++..+.++.+..+|+.+++||.+||+.||++|||++|+|+||||+...+.++++|++.++|++
T Consensus       218 ~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~~~~~l~p~~~~~~ea  292 (293)
T d1yhwa1         218 N-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEA  292 (293)
T ss_dssp             T-SCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCCCGGGGHHHHHHHHHC
T ss_pred             C-CCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCCCCCcCCCCCcccccC
Confidence            7 67777778887777777777778999999999999999999999999999999999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-51  Score=385.44  Aligned_cols=262  Identities=30%  Similarity=0.526  Sum_probs=224.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..+...||+|.+........+.+.+|+.++++++|+||+++++++.+++.+++|||||++|+|.++
T Consensus        20 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~   99 (288)
T d2jfla1          20 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV   99 (288)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             EeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHH
Confidence            69999999999999888889999998766666667899999999999999999999999999999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +.+  +.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||  ++.........           
T Consensus       100 ~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG--~a~~~~~~~~~-----------  166 (288)
T d2jfla1         100 MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG--VSAKNTRTIQR-----------  166 (288)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECHHHHHH-----------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEech--hhhccCCCccc-----------
Confidence            754  369999999999999999999999999999999999999999999999999  44321111110           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (288)
T d2jfla1         167 --------------------------------------------------------------------------------  166 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCccee-----cCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVL-----DKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  ..+.+||+.|+|||++.     +..++..+|+||+||++|||++|..     
T Consensus       167 ----------------------------~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~-----  213 (288)
T d2jfla1         167 ----------------------------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-----  213 (288)
T ss_dssp             ----------------------------HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCC-----
Confidence                                        12347899999999884     4445678999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          ||.. .++.+.+..+.++.++.+..+..+|+.+.+||++||+.||++|||++|+|+||||+... ...+.+||.++
T Consensus       214 ----Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~-~~p~~~li~e~  287 (288)
T d2jfla1         214 ----PHHE-LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS-NKPIRELIAEA  287 (288)
T ss_dssp             ----TTTT-SCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC-CHHHHHHHHHC
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC-CCCcHHHHhcc
Confidence                8877 67788888999988888877788999999999999999999999999999999998532 33456677665


Q ss_pred             H
Q psy9736         394 K  394 (400)
Q Consensus       394 ~  394 (400)
                      |
T Consensus       288 k  288 (288)
T d2jfla1         288 K  288 (288)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-50  Score=375.59  Aligned_cols=255  Identities=18%  Similarity=0.222  Sum_probs=208.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.|+++.+..++..||+|.+..... ...+.+.+|+.++++++|+||+++++++.+++.+|+|||||++|+|.+
T Consensus        13 lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~   92 (271)
T d1nvra_          13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD   92 (271)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGG
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHH
Confidence            6999999999999888888899998865432 234668999999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      ++... .+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||  ++.........           
T Consensus        93 ~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG--~a~~~~~~~~~-----------  159 (271)
T d1nvra_          93 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFG--LATVFRYNNRE-----------  159 (271)
T ss_dssp             GSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT--TCEECEETTEE-----------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccch--hheeeccCCcc-----------
Confidence            98754 79999999999999999999999999999999999999999999999999  44422111100           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (271)
T d1nvra_         160 --------------------------------------------------------------------------------  159 (271)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                ....+.+||+.|||||++.+..+. ..+|+||+|+++|||++|..         
T Consensus       160 --------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~---------  204 (271)
T d1nvra_         160 --------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL---------  204 (271)
T ss_dssp             --------------------------CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC---------
T ss_pred             --------------------------ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCC---------
Confidence                                      012345899999999999988765 67899999999999999987         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                      ||....+...... ...........+..+|+.+.+||++||+.||++|||++|+|+||||++.-.++
T Consensus       205 pf~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l~kg  270 (271)
T d1nvra_         205 PWDQPSDSCQEYS-DWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKG  270 (271)
T ss_dssp             SCSSSSTTSHHHH-HHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCCCC
T ss_pred             CCCCCChHHHHHH-HHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCCCCC
Confidence            8866333333333 33343444444567899999999999999999999999999999998654443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-49  Score=376.31  Aligned_cols=262  Identities=29%  Similarity=0.473  Sum_probs=224.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+..++..||+|.+.....   ...+.+.+|+.++++++|+||+++++++.+++.+|+|||||.++++
T Consensus        23 lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l  102 (309)
T d1u5ra_          23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSAS  102 (309)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHH
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCch
Confidence            6999999999999888888999998865432   2346688999999999999999999999999999999999999888


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||  ++....              
T Consensus       103 ~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG--~a~~~~--------------  166 (309)
T d1u5ra_         103 DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFG--SASIMA--------------  166 (309)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCT--TCBSSS--------------
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecc--cccccC--------------
Confidence            766654 479999999999999999999999999999999999999999999999999  333110              


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (309)
T d1u5ra_         167 --------------------------------------------------------------------------------  166 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec---CCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD---KNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                   .....+||+.|+|||++.+   ..++..+|+||+|+++|||++|..     
T Consensus       167 -----------------------------~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~-----  212 (309)
T d1u5ra_         167 -----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP-----  212 (309)
T ss_dssp             -----------------------------SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             -----------------------------CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCC-----
Confidence                                         0123478999999999864   345678999999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcchhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAA  393 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~~~~~~  393 (400)
                          ||.. .+..+.+..+..+..+.+.. ..+|+.+.+||++||+.||++|||++|+|+||||+...++..+.+++...
T Consensus       213 ----Pf~~-~~~~~~~~~i~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~~~~~~~~~~~~~  286 (309)
T d1u5ra_         213 ----PLFN-MNAMSALYHIAQNESPALQS-GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRT  286 (309)
T ss_dssp             ----TTTT-SCHHHHHHHHHHSCCCCCSC-TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCCTTHHHHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHhCCCCCCCC-CCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCCCchhhHHHHHHH
Confidence                8877 67778888888887665543 45899999999999999999999999999999999988888888888877


Q ss_pred             HHHhc
Q psy9736         394 KEAAK  398 (400)
Q Consensus       394 ~~~~~  398 (400)
                      +...+
T Consensus       287 ~~~~~  291 (309)
T d1u5ra_         287 KDAVR  291 (309)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=368.31  Aligned_cols=244  Identities=21%  Similarity=0.352  Sum_probs=210.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+..+...||+|.+...   .....+.+.+|+.++++++|+||+++++++.+++.+|+|||||++|+|
T Consensus        14 iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L   93 (263)
T d2j4za1          14 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV   93 (263)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence            69999999999988888888888887532   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||  ++.....             
T Consensus        94 ~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG--~a~~~~~-------------  158 (263)
T d2j4za1          94 YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPS-------------  158 (263)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCC--SCSCCCC-------------
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccc--eeeecCC-------------
Confidence            999875 479999999999999999999999999999999999999999999999999  3331100             


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (263)
T d2j4za1         159 --------------------------------------------------------------------------------  158 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+||+.|+|||++.+..++..+|+||+||++|||++|..        
T Consensus       159 ----------------------------~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~--------  202 (263)
T d2j4za1         159 ----------------------------SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP--------  202 (263)
T ss_dssp             ----------------------------CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCC--------
Confidence                                        00223479999999999999988899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+.+..+.+.... +  +..+|+.+.+||.+||+.||++|||++|+|+||||+..
T Consensus       203 -Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         203 -PFEA-NTYQETYKRISRVEFT-F--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             -TTCC-SSHHHHHHHHHTTCCC-C--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             -CCCC-CCHHHHHHHHHcCCCC-C--CccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence             8866 6777777777766432 2  34588999999999999999999999999999999853

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=360.31  Aligned_cols=244  Identities=22%  Similarity=0.363  Sum_probs=204.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe----CCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV----GEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+..+...||+|.+....  ....+.+.+|++++++++|+||++++++|..    +..+|+||||+++
T Consensus        17 iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~   96 (270)
T d1t4ha_          17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS   96 (270)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCS
T ss_pred             EecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCC
Confidence            699999999999988888889999876543  2345778999999999999999999999875    3468999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCCCceEec-CCCceEEeccchhhhhhhccccchhhc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQ--VIHRDIKSDNILLG-LDGSVKLSKWNRFIATKLYIEISKVII  150 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~  150 (400)
                      ++|.+++.+ ..+++..++.++.||+.||.|||+++  |+||||||+||+++ .++.+||+|||  ++.....       
T Consensus        97 g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFG--la~~~~~-------  167 (270)
T d1t4ha_          97 GTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG--LATLKRA-------  167 (270)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTT--GGGGCCT-------
T ss_pred             CcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecC--cceeccC-------
Confidence            999999875 47999999999999999999999998  99999999999996 47899999999  4431000       


Q ss_pred             cccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCC
Q psy9736         151 YCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPI  230 (400)
Q Consensus       151 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  230 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (270)
T d1t4ha_         168 --------------------------------------------------------------------------------  167 (270)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcc
Q psy9736         231 EEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWS  310 (400)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws  310 (400)
                                                        ....+.+||+.|+|||++.+ +++..+|+||+|+++|||++|..  
T Consensus       168 ----------------------------------~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~--  210 (270)
T d1t4ha_         168 ----------------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEY--  210 (270)
T ss_dssp             ----------------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSC--
T ss_pred             ----------------------------------CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCC--
Confidence                                              00224479999999999876 57789999999999999999987  


Q ss_pred             cccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         311 FQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       311 ~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                             ||....+.......+..+..+ ...+...++.+.+||.+||+.||++|||++|+|+||||+
T Consensus       211 -------Pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         211 -------PYSECQNAAQIYRRVTSGVKP-ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -------TTTTCSSHHHHHHHHTTTCCC-GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -------CCCCcccHHHHHHHHHcCCCC-cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                   998755666666666665443 233445788999999999999999999999999999996

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.1e-48  Score=372.57  Aligned_cols=250  Identities=20%  Similarity=0.257  Sum_probs=216.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|.+........+.+.+|+.++++++|+||++++++|.+++.+|+|||||++|+|.++
T Consensus        34 lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~  113 (350)
T d1koaa2          34 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK  113 (350)
T ss_dssp             EEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHH
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHH
Confidence            69999999999999988999999998776666678899999999999999999999999999999999999999999999


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC--CCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL--DGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +..  +.+++..++.++.||+.||.|||++||+||||||+||+++.  ++.++|+|||  ++......            
T Consensus       114 l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG--~a~~~~~~------------  179 (350)
T d1koaa2         114 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFG--LTAHLDPK------------  179 (350)
T ss_dssp             HTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCT--TCEECCTT------------
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecc--hheecccc------------
Confidence            853  46999999999999999999999999999999999999964  5889999999  44311100            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       180 --------------------------------------------------------------------------------  179 (350)
T d1koaa2         180 --------------------------------------------------------------------------------  179 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ....+..||+.|||||++.+..++..+|+||+||++|||++|..        
T Consensus       180 ----------------------------~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~--------  223 (350)
T d1koaa2         180 ----------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS--------  223 (350)
T ss_dssp             ----------------------------SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCC--------
Confidence                                        01233478999999999999988889999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         317 IPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                       ||.. .+..+.+..+....... ......+|+.+.+||++||+.||++|||++|+|+||||+....
T Consensus       224 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         224 -PFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             -SSCC-SSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             -CCCC-CCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence             8876 67778888887764432 2234568999999999999999999999999999999997544

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-48  Score=362.34  Aligned_cols=244  Identities=24%  Similarity=0.341  Sum_probs=201.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe--CCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|++||++.+..++..||+|.+....  ....+.+.+|+.++++++|+||+++++++.+  ++.+|+|||||++|+
T Consensus        12 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~   91 (269)
T d2java1          12 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD   91 (269)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEE
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCc
Confidence            699999999999998888899999886553  2345678999999999999999999999864  456899999999999


Q ss_pred             hHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCCCceEecCCCceEEeccchhhhhhhccccc
Q psy9736          77 LTDVVTE-----TCMDEGQIAAVCREVLQALEFLHSNQ-----VIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEIS  146 (400)
Q Consensus        77 L~~~i~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~  146 (400)
                      |.+++..     ..+++..++.++.|++.||.|||+++     |+||||||+||+++.++.++|+|||  ++........
T Consensus        92 L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG--~a~~~~~~~~  169 (269)
T d2java1          92 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG--LARILNHDTS  169 (269)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHH--HHHHC-----
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecc--ceeecccCCC
Confidence            9998863     36999999999999999999999876     9999999999999999999999999  5542211110


Q ss_pred             hhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         147 KVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (269)
T d2java1         170 --------------------------------------------------------------------------------  169 (269)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCC
Q psy9736         227 TKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGP  306 (400)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~g  306 (400)
                                                             .....+||+.|+|||++.+..++..+|+||+|+++|||++|
T Consensus       170 ---------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg  210 (269)
T d2java1         170 ---------------------------------------FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  210 (269)
T ss_dssp             ---------------------------------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------------------------ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhC
Confidence                                                   02234789999999999998888999999999999999999


Q ss_pred             CCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccc
Q psy9736         307 HKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL  377 (400)
Q Consensus       307 d~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~  377 (400)
                      ..         ||.. .+..+....+..+..+.+  +.++|+.+.+||++||+.||++|||++|+|+|||+
T Consensus       211 ~~---------Pf~~-~~~~~~~~~i~~~~~~~~--~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         211 MP---------PFTA-FSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             SC---------SCCC-SSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CC---------CCCC-CCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            87         8876 777788888888866655  34689999999999999999999999999999996

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-49  Score=373.33  Aligned_cols=248  Identities=23%  Similarity=0.353  Sum_probs=204.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|++|+++.+..++..||+|.+.... ....+++.+|+.+|++++|+||++++++|.+++++|+||||+++++|.+
T Consensus        14 iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~   93 (322)
T d1s9ja_          14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ   93 (322)
T ss_dssp             EECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHH
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHH
Confidence            699999999999988888899999886543 2345778999999999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          80 VVTE-TCMDEGQIAAVCREVLQALEFLHSN-QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        80 ~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      ++.+ +.+++..++.++.|++.||.|||++ +|+||||||+||+++.+|.++|+|||  ++.......            
T Consensus        94 ~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFG--la~~~~~~~------------  159 (322)
T d1s9ja_          94 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG--VSGQLIDSM------------  159 (322)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCC--CCHHHHHHT------------
T ss_pred             HHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCC--CccccCCCc------------
Confidence            9875 4799999999999999999999975 99999999999999999999999999  444221100            


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       160 --------------------------------------------------------------------------------  159 (322)
T d1s9ja_         160 --------------------------------------------------------------------------------  159 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                   .++.+||+.|+|||++.+.+++..+|+||+||++|||++|..         
T Consensus       160 -----------------------------~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~---------  201 (322)
T d1s9ja_         160 -----------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY---------  201 (322)
T ss_dssp             -----------------------------C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSC---------
T ss_pred             -----------------------------cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCC---------
Confidence                                         234589999999999999999999999999999999999976         


Q ss_pred             CcchhhcH-----------------------------------------HHHHHHHHhCCCCCcchhhhhcHHHHHHHHH
Q psy9736         318 PYLFILSC-----------------------------------------RQALYLIATNKKPEIKEKEKLSQIFQDFLDQ  356 (400)
Q Consensus       318 P~~~~~~~-----------------------------------------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~  356 (400)
                      ||......                                         .+....+....++.++. ..+|..+.|||++
T Consensus       202 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~dli~~  280 (322)
T d1s9ja_         202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS-GVFSLEFQDFVNK  280 (322)
T ss_dssp             CSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCB-TTBCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCcc-ccCCHHHHHHHHH
Confidence            66542211                                         12222233333333322 3378899999999


Q ss_pred             hhhhhhhhhhcHHHHhcCccccccC
Q psy9736         357 CLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       357 ~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      ||++||++|||++|+|+||||++..
T Consensus       281 ~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         281 CLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             HcCCChhHCcCHHHHhhCHhhCcCC
Confidence            9999999999999999999998643

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-48  Score=364.06  Aligned_cols=248  Identities=20%  Similarity=0.274  Sum_probs=210.3

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|++||++.+..+...||+|.+...   .....+.+.+|+.++++++|+||++++++|.+++.+|+||||+++|+|
T Consensus        16 lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L   95 (288)
T d1uu3a_          16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL   95 (288)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCH
Confidence            68999999999988888888999987532   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.+|.++|+|||  ++.........         
T Consensus        96 ~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG--~a~~~~~~~~~---------  164 (288)
T d1uu3a_          96 LKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQ---------  164 (288)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT--TCEECC--------------
T ss_pred             HHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccc--cceecccCCcc---------
Confidence            998874 589999999999999999999999999999999999999999999999999  44422111100         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (288)
T d1uu3a_         165 --------------------------------------------------------------------------------  164 (288)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ....+.+||+.|+|||++.+..++..+|+||+||++|||++|..        
T Consensus       165 ----------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~--------  208 (288)
T d1uu3a_         165 ----------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP--------  208 (288)
T ss_dssp             ---------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             ----------------------------cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCC--------
Confidence                                        01234579999999999999999899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHH------HhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASL------LLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~------~l~hp~~~~~  380 (400)
                       ||.. .+..+...+|.++... +  +..+++.+.+||++||+.||++|||++|      +++||||+..
T Consensus       209 -Pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         209 -PFRA-GNEYLIFQKIIKLEYD-F--PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             -SSCC-SSHHHHHHHHHTTCCC-C--CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             -CCCC-cCHHHHHHHHHcCCCC-C--CccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence             8877 6777888888777532 3  3458999999999999999999999998      5889999864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.9e-48  Score=364.74  Aligned_cols=250  Identities=23%  Similarity=0.317  Sum_probs=201.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+..+...||+|.+.... ....+.+.+|+.++++++|+||+++++++.+++.+|+|||||+|++|.+
T Consensus        17 lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~   96 (307)
T d1a06a_          17 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD   96 (307)
T ss_dssp             SBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             EeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence            799999999999888888888999876443 2234668899999999999999999999999999999999999999999


Q ss_pred             HHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec---CCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          80 VVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG---LDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        80 ~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      ++... .+++..+..++.||+.||.|||+++|+||||||+||++.   .++.++|+|||  ++......           
T Consensus        97 ~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG--~a~~~~~~-----------  163 (307)
T d1a06a_          97 RIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG--LSKMEDPG-----------  163 (307)
T ss_dssp             HHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----------------------
T ss_pred             hhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccc--eeEEccCC-----------
Confidence            99754 799999999999999999999999999999999999995   46899999999  44311100           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (307)
T d1a06a_         164 --------------------------------------------------------------------------------  163 (307)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                   ....+.+||+.|+|||++.+..++..+|+||+||++|||++|..       
T Consensus       164 -----------------------------~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~-------  207 (307)
T d1a06a_         164 -----------------------------SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP-------  207 (307)
T ss_dssp             --------------------------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             -----------------------------CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCC-------
Confidence                                         00234579999999999999988999999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                        ||.. .+..+....+.++... ..+.+.++|+.+.+||.+||++||++|||++|+|+||||+....
T Consensus       208 --Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  272 (307)
T d1a06a_         208 --PFYD-ENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTA  272 (307)
T ss_dssp             --SCCC-SSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCC
T ss_pred             --CCCC-CCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCc
Confidence              8877 6677777777776443 22334568999999999999999999999999999999986443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.6e-47  Score=368.68  Aligned_cols=248  Identities=21%  Similarity=0.248  Sum_probs=214.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.+..++..||+|.+........+.+.+|+.++++++|+||++++++|.+++.+|+|||||+|++|.+.
T Consensus        37 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~  116 (352)
T d1koba_          37 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR  116 (352)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHH
Confidence            69999999999999888899999998766655677889999999999999999999999999999999999999999988


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEec--CCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLG--LDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +...  .+++..++.++.||+.||.|||++||+||||||+||+++  .++.++|+|||  ++.......           
T Consensus       117 ~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFG--la~~~~~~~-----------  183 (352)
T d1koba_         117 IAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG--LATKLNPDE-----------  183 (352)
T ss_dssp             TTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCT--TCEECCTTS-----------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecc--cceecCCCC-----------
Confidence            7643  699999999999999999999999999999999999998  56899999999  443211100           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (352)
T d1koba_         184 --------------------------------------------------------------------------------  183 (352)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+..||+.|+|||++.+..++..+|+||+||++|||++|..        
T Consensus       184 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~--------  226 (352)
T d1koba_         184 -----------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS--------  226 (352)
T ss_dssp             -----------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC--------
T ss_pred             -----------------------------ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCC--------
Confidence                                         1223478999999999999989899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+.+..+.+..... ...+..+|+.+.+||.+||+.||++|||++|+|+||||+..
T Consensus       227 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         227 -PFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             -CCCC-CCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence             8876 67777888887765432 22345689999999999999999999999999999999863

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-47  Score=363.86  Aligned_cols=246  Identities=21%  Similarity=0.298  Sum_probs=212.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+..++..||+|++...   .....+.+.+|+.+|++++|+||++++++|.++..+|+||||+++|+|
T Consensus        13 lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L   92 (337)
T d1o6la_          13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL   92 (337)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCch
Confidence            69999999999998888888888887532   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      .+++.. +.+++..++.++.|++.||.|||++||+||||||+||+++.+|.++|+|||  ++......            
T Consensus        93 ~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG--~a~~~~~~------------  158 (337)
T d1o6la_          93 FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG--LCKEGISD------------  158 (337)
T ss_dssp             HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCSCCT------------
T ss_pred             hhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecc--cccccccC------------
Confidence            999875 479999999999999999999999999999999999999999999999999  44311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (337)
T d1o6la_         159 --------------------------------------------------------------------------------  158 (337)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                 .....+.+||+.|+|||++.+..++..+|.||+||++|||++|..        
T Consensus       159 ---------------------------~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~--------  203 (337)
T d1o6la_         159 ---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL--------  203 (337)
T ss_dssp             ---------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             ---------------------------CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCC--------
Confidence                                       011345689999999999999999999999999999999999986        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+..+... +  +..+|+.+.+||.+||++||++|++     ++|+++||||+..
T Consensus       204 -pf~~-~~~~~~~~~i~~~~~~-~--p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         204 -PFYN-QDHERLFELILMEEIR-F--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCC-C--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             -CCCC-cCHHHHHHHHhcCCCC-C--CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence             8877 6777777777776532 2  4568999999999999999999994     9999999999753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-47  Score=356.62  Aligned_cols=252  Identities=19%  Similarity=0.261  Sum_probs=210.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc------CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA------QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~------~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|++||++.+..++..||+|.+...      .....+.+.+|+.++++++|+||++++++|.+++.+|+|||||++
T Consensus        18 lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~g   97 (293)
T d1jksa_          18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG   97 (293)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            69999999999988777777888876432      122467899999999999999999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC----ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG----SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      |+|.+++.. +.+++..++.++.|++.||.|||+.+|+||||||+||+++.++    .++++|||  ++......     
T Consensus        98 g~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG--~a~~~~~~-----  170 (293)
T d1jksa_          98 GELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG--LAHKIDFG-----  170 (293)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCT--TCEECTTS-----
T ss_pred             ccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchh--hhhhcCCC-----
Confidence            999999875 4799999999999999999999999999999999999998876    58999999  43311000     


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (293)
T d1jksa_         171 --------------------------------------------------------------------------------  170 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ....+..||+.|+|||++.+..++..+|+||+|+++|||++|.. 
T Consensus       171 -----------------------------------~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~-  214 (293)
T d1jksa_         171 -----------------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS-  214 (293)
T ss_dssp             -----------------------------------CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC-
T ss_pred             -----------------------------------ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCC-
Confidence                                               01233478999999999999888899999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCC
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA  384 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~  384 (400)
                              ||.. .+..+.+..+........ ..+.++|..+.+||++||+.||++|||++|+|+||||+......
T Consensus       215 --------Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~  281 (293)
T d1jksa_         215 --------PFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ  281 (293)
T ss_dssp             --------SSCC-SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-----
T ss_pred             --------CCCC-CCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCChhH
Confidence                    8877 777788888877754332 23456889999999999999999999999999999998654433

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.7e-47  Score=358.58  Aligned_cols=243  Identities=21%  Similarity=0.285  Sum_probs=211.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++.+..++..||+|.+...   .....+.+.+|+.++++++|+||+++++++.+++.+|+||||++|+++
T Consensus        12 lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l   91 (316)
T d1fota_          12 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL   91 (316)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccc
Confidence            68999999999998888888999987532   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..++... .+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++....    .         
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG--~a~~~~----~---------  156 (316)
T d1fota_          92 FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG--FAKYVP----D---------  156 (316)
T ss_dssp             HHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCS--SCEECS----S---------
T ss_pred             cccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCc--cceEec----c---------
Confidence            9988765 68999999999999999999999999999999999999999999999999  443110    0         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (316)
T d1fota_         157 --------------------------------------------------------------------------------  156 (316)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.+||+.|+|||++.+..++..+|+||+|+++|||++|..        
T Consensus       157 -----------------------------~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~--------  199 (316)
T d1fota_         157 -----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT--------  199 (316)
T ss_dssp             -----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCC--------
Confidence                                         0223589999999999999988899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||.. .+..+....+.++....   +..+++.+.++|++||++||++|+     |++++|+||||+..
T Consensus       200 -Pf~~-~~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         200 -PFYD-SNTMKTYEKILNAELRF---PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             -TTCC-SSHHHHHHHHHHCCCCC---CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             -CCCC-cCHHHHHHHHHcCCCCC---CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence             8877 77888888888875432   345888999999999999999996     99999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=355.53  Aligned_cols=252  Identities=18%  Similarity=0.201  Sum_probs=201.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcch-----HHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPK-----KELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~-----~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++.+..++..||+|++.......     .+.+.+|+.++++++|+||+++++++..++.+|+||||+.++
T Consensus         6 lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~   85 (299)
T d1ua2a_           6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD   85 (299)
T ss_dssp             EEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEE
T ss_pred             eccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcch
Confidence            699999999999999999999999986543221     246889999999999999999999999999999999999887


Q ss_pred             ChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          76 SLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        76 ~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++..+... ..+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||  .+.......         
T Consensus        86 ~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG--~a~~~~~~~---------  154 (299)
T d1ua2a_          86 LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFG--LAKSFGSPN---------  154 (299)
T ss_dssp             HHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCG--GGSTTTSCC---------
T ss_pred             HHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCc--cccccCCCc---------
Confidence            77766654 369999999999999999999999999999999999999999999999999  443111100         


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       155 --------------------------------------------------------------------------------  154 (299)
T d1ua2a_         155 --------------------------------------------------------------------------------  154 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ....+.+||+.|+|||++... .++..+|+||+||++|||++|..     
T Consensus       155 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~-----  199 (299)
T d1ua2a_         155 ------------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP-----  199 (299)
T ss_dssp             ------------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ------------------------------ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcC-----
Confidence                                          112345799999999998754 45688999999999999999975     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--CC--------------------CCcc---hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--KK--------------------PEIK---EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--~~--------------------~~~~---~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                          ||.. .+..+.+..|.+.  .+                    +..+   .....++.+.|||.+||++||++|||+
T Consensus       200 ----pf~~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa  274 (299)
T d1ua2a_         200 ----FLPG-DSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA  274 (299)
T ss_dssp             ----SSCC-SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             ----CCCC-CCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCH
Confidence                7765 5666666665432  00                    0000   012467899999999999999999999


Q ss_pred             HHHhcCccccccCCC
Q psy9736         369 SLLLKHPFLKIARPL  383 (400)
Q Consensus       369 ~~~l~hp~~~~~~~~  383 (400)
                      +|+|+||||++.+.+
T Consensus       275 ~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         275 TQALKMKYFSNRPGP  289 (299)
T ss_dssp             HHHHTSGGGTSSSCC
T ss_pred             HHHhCCHhhCCCCCC
Confidence            999999999975543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.1e-46  Score=346.82  Aligned_cols=247  Identities=21%  Similarity=0.319  Sum_probs=206.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc---------chHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ---------PKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~---------~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      ||+|+|++|+++++...+..||+|.+.....         ...+++.+|+.++++++ |+||+++++++.+++.+|+|||
T Consensus        11 iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE   90 (277)
T d1phka_          11 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD   90 (277)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEE
Confidence            6899999999999888888888888754321         12356889999999996 9999999999999999999999


Q ss_pred             ccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          71 YLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        71 ~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      |+++++|.+++.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.++.++|+|||  .+.......    
T Consensus        91 ~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG--~a~~~~~~~----  164 (277)
T d1phka_          91 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG--FSCQLDPGE----  164 (277)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCT--TCEECCTTC----
T ss_pred             cCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccch--heeEccCCC----
Confidence            9999999999964 489999999999999999999999999999999999999999999999999  443221100    


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (277)
T d1phka_         165 --------------------------------------------------------------------------------  164 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec------CCCCcccCCCCccchhhhh
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD------KNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~d~~s~g~~~~~~  303 (400)
                                                          ......||+.|+|||.+..      ..++..+|+||+|+++|||
T Consensus       165 ------------------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyem  208 (277)
T d1phka_         165 ------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  208 (277)
T ss_dssp             ------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             ------------------------------------ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhh
Confidence                                                0123367788888887753      3345678999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCC-CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKP-EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                      ++|..         ||.. .+.......+..+... ..+...++|+.+.+||.+||+.||++|||++|+|+||||+.
T Consensus       209 l~g~~---------Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         209 LAGSP---------PFWH-RKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHSSC---------SSCC-SSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccCCC---------CCCC-CCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            99997         9887 6777777777776432 33344579999999999999999999999999999999985

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-46  Score=358.45  Aligned_cols=243  Identities=20%  Similarity=0.276  Sum_probs=211.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.|+++.+..++..||+|.+...   .....+.+.+|+.+++.++|+||+++++++......++|+||+.+++|
T Consensus        49 lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l  128 (350)
T d1rdqe_          49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM  128 (350)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             eecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccch
Confidence            69999999999998888888999987532   223457789999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ...+.. +.+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++....    .         
T Consensus       129 ~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG--~a~~~~----~---------  193 (350)
T d1rdqe_         129 FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG--FAKRVK----G---------  193 (350)
T ss_dssp             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT--TCEECS----S---------
T ss_pred             hhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeece--eeeecc----c---------
Confidence            998875 479999999999999999999999999999999999999999999999999  443110    0         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       194 --------------------------------------------------------------------------------  193 (350)
T d1rdqe_         194 --------------------------------------------------------------------------------  193 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+.+||+.|||||++.+..++..+|+||+||++|||++|..        
T Consensus       194 -----------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~--------  236 (350)
T d1rdqe_         194 -----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP--------  236 (350)
T ss_dssp             -----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCC--------
Confidence                                         0223479999999999999988899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCcccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKIA  380 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~~  380 (400)
                       ||.. .+....+..+..+....   +..+++.+.+||++||+.||++|+     |++++++||||+..
T Consensus       237 -Pf~~-~~~~~~~~~i~~~~~~~---p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         237 -PFFA-DQPIQIYEKIVSGKVRF---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             -SSCC-SSHHHHHHHHHHCCCCC---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             -CCCC-cCHHHHHHHHhcCCCCC---CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence             8876 77888888888775433   345899999999999999999995     99999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=351.71  Aligned_cols=246  Identities=23%  Similarity=0.284  Sum_probs=211.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.|+++.+..+...||+|.+..... +.+.+.+|+.+|+.++|+||++++++|.+++.+|+|||||+|++|.++
T Consensus        13 lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~   91 (321)
T d1tkia_          13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER   91 (321)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHH
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHH
Confidence            6999999999999988888999999876543 456788999999999999999999999999999999999999999999


Q ss_pred             Hhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC--CceEEeccchhhhhhhccccchhhccccccc
Q psy9736          81 VTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD--GSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        81 i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +...  .+++..++.++.||+.||.|||++||+||||||+||+++.+  +.++|+|||  .+.......           
T Consensus        92 i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG--~~~~~~~~~-----------  158 (321)
T d1tkia_          92 INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG--QARQLKPGD-----------  158 (321)
T ss_dssp             HTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCT--TCEECCTTC-----------
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccc--hhhccccCC-----------
Confidence            9753  68999999999999999999999999999999999999854  578999999  333110000           


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       159 --------------------------------------------------------------------------------  158 (321)
T d1tkia_         159 --------------------------------------------------------------------------------  158 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   ...+..||+.|+|||.+.+..+...+|.||+||++|+|++|..        
T Consensus       159 -----------------------------~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~--------  201 (321)
T d1tkia_         159 -----------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN--------  201 (321)
T ss_dssp             -----------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCC--------
Confidence                                         0123368899999999998888899999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhCCCCCc-chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         317 IPYLFILSCRQALYLIATNKKPEI-KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                       ||.. .+..+.+..|.++..... ..+..+|+.+.+||++||+.||++|||++|+|+||||+.
T Consensus       202 -Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         202 -PFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             -TTCC-SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             -CCCC-CCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence             8877 777888888887754332 223468999999999999999999999999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-45  Score=349.00  Aligned_cols=245  Identities=21%  Similarity=0.310  Sum_probs=208.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc---CcchHHHHHHHHHHHH-hCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA---QQPKKELIINEILVMR-ENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~-~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.+..+...||+|.+...   .....+.+.+|+.++. .++|+||+++++++.+++.+|+||||+++|+
T Consensus        10 iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~   89 (320)
T d1xjda_          10 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGD   89 (320)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred             EecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCc
Confidence            69999999999999888899999988532   1223456677777765 6899999999999999999999999999999


Q ss_pred             hHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++.. ..+++..++.++.||+.||.|||+++++||||||+||+++.++.++|+|||  .+......           
T Consensus        90 L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG--~a~~~~~~-----------  156 (320)
T d1xjda_          90 LMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFG--MCKENMLG-----------  156 (320)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT--TCBCCCCT-----------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccc--hhhhcccc-----------
Confidence            9999975 479999999999999999999999999999999999999999999999999  43311100           


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (320)
T d1xjda_         157 --------------------------------------------------------------------------------  156 (320)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......+||+.|+|||++.+..++..+|+||+||++|||++|..       
T Consensus       157 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~-------  201 (320)
T d1xjda_         157 ----------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS-------  201 (320)
T ss_dssp             ----------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC-------
T ss_pred             ----------------------------cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCC-------
Confidence                                        011233479999999999999999999999999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH-HHhcCccccc
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS-LLLKHPFLKI  379 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~-~~l~hp~~~~  379 (400)
                        ||.. .+..+....+..+.+ .+  +..+|+.+.+||++||+.||++|||+. ++++||||+.
T Consensus       202 --PF~~-~~~~~~~~~i~~~~~-~~--p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         202 --PFHG-QDEEELFHSIRMDNP-FY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             --SSCC-SSHHHHHHHHHHCCC-CC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             --CCCC-CCHHHHHHHHHcCCC-CC--CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence              9976 677777777777654 33  345889999999999999999999995 8999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-45  Score=342.32  Aligned_cols=254  Identities=15%  Similarity=0.201  Sum_probs=209.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++....++..||+|.+.... ...++|.+|+.++++++|+||+++++++.+++..+++||||++|+|.++
T Consensus        25 iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~  103 (287)
T d1opja_          25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY  103 (287)
T ss_dssp             TTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHH
Confidence            799999999999998888899999986544 3567899999999999999999999999999999999999999999999


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  ++.....+....         
T Consensus       104 l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG--~a~~~~~~~~~~---------  172 (287)
T d1opja_         104 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG--LSRLMTGDTYTA---------  172 (287)
T ss_dssp             HHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC--CTTTCCSSSSEE---------
T ss_pred             hhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEcccc--ceeecCCCCcee---------
Confidence            864   368999999999999999999999999999999999999999999999999  544221111000         


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (287)
T d1opja_         173 --------------------------------------------------------------------------------  172 (287)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                   .....||+.|+|||++.+..++..+|+||+|+++|||++|..         
T Consensus       173 -----------------------------~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~---------  214 (287)
T d1opja_         173 -----------------------------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM---------  214 (287)
T ss_dssp             -----------------------------ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC---------
T ss_pred             -----------------------------eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCC---------
Confidence                                         112257889999999999988899999999999999999876         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCCCCCcch
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP  388 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~~~~l~~  388 (400)
                      ||....+.......+..+..+..  +..+++.+.+||.+||+.||++|||++++++  +|+.....+++.+
T Consensus       215 p~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~~~~~~~~~~  281 (287)
T d1opja_         215 SPYPGIDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ--AFETMFQESSISD  281 (287)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHTTSSSCHHH
T ss_pred             CCCCcchHHHHHHHHhcCCCCCC--CccchHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHHHHHhCCCCh
Confidence            77775666666555556554444  4458899999999999999999999999965  5554333344433

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.7e-45  Score=353.81  Aligned_cols=246  Identities=18%  Similarity=0.278  Sum_probs=197.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHH---HHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINE---ILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E---i~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++.+..++..||+|.+....   ......+.+|   +.+++.++|+||++++++|.+++.+|+||||+++
T Consensus        12 lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~g   91 (364)
T d1omwa3          12 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   91 (364)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCC
Confidence            699999999999988888889999874321   1122334444   6667777899999999999999999999999999


Q ss_pred             CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          75 GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        75 ~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++|.+++.. ..+++..++.++.||+.||.|||+++|+||||||+||+++.+|.++|+|||  ++.....    .     
T Consensus        92 g~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFG--la~~~~~----~-----  160 (364)
T d1omwa3          92 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG--LACDFSK----K-----  160 (364)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCT--TCEECSS----S-----
T ss_pred             CcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeec--eeeecCC----C-----
Confidence            999999875 478999999999999999999999999999999999999999999999999  4331100    0     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (364)
T d1omwa3         161 --------------------------------------------------------------------------------  160 (364)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      .....+||+.|+|||++.. ..++..+|+||+||++|||++|..    
T Consensus       161 --------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~----  204 (364)
T d1omwa3         161 --------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS----  204 (364)
T ss_dssp             --------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCC----
Confidence                                            0223479999999999975 557788999999999999999987    


Q ss_pred             cccccCcchhhc-HHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhc-----HHHHhcCcccccc
Q psy9736         313 PHFLIPYLFILS-CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRAS-----ASLLLKHPFLKIA  380 (400)
Q Consensus       313 ~~~~~P~~~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s-----~~~~l~hp~~~~~  380 (400)
                           ||..... ....+.......+..  .+..+|+.+.+||.+||++||++|||     ++|+++||||+..
T Consensus       205 -----Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         205 -----PFRQHKTKDKHEIDRMTLTMAVE--LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             -----SSCSSCSSCHHHHHHHSSSCCCC--CCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             -----CCCCCCHHHHHHHHHhcccCCCC--CCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence                 8876321 122222222222222  24468999999999999999999999     7999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-45  Score=341.87  Aligned_cols=251  Identities=23%  Similarity=0.290  Sum_probs=201.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.|+++.+..+...||+|.+.....  ...+++.+|+.++++++|+||++++++|.+++.+|+||||+.+ ++.
T Consensus        10 lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~   88 (298)
T d1gz8a_          10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLK   88 (298)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHH
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chh
Confidence            6999999999999988888999998865432  2346789999999999999999999999999999999999965 444


Q ss_pred             HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          79 DVVT---ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        79 ~~i~---~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .++.   ...+++..++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||  .+........         
T Consensus        89 ~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG--~a~~~~~~~~---------  157 (298)
T d1gz8a_          89 KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--LARAFGVPVR---------  157 (298)
T ss_dssp             HHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTT--HHHHHCCCSB---------
T ss_pred             hhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCC--cceeccCCcc---------
Confidence            4443   2369999999999999999999999999999999999999999999999999  5542211110         


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (298)
T d1gz8a_         158 --------------------------------------------------------------------------------  157 (298)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                    ......||+.|+|||++....+ +..+|.||+|+++|+|++|..      
T Consensus       158 ------------------------------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~------  201 (298)
T d1gz8a_         158 ------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA------  201 (298)
T ss_dssp             ------------------------------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC------
T ss_pred             ------------------------------cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCC------
Confidence                                          1233478999999999887665 478999999999999999987      


Q ss_pred             cccCcchhhcHHHHHHHHHhC--CCCCcc------------------------hhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         315 FLIPYLFILSCRQALYLIATN--KKPEIK------------------------EKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~--~~~~~~------------------------~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                         ||.. .+....+..+.+.  .+....                        ....+|+.+.|||++||+.||++|||+
T Consensus       202 ---Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~  277 (298)
T d1gz8a_         202 ---LFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA  277 (298)
T ss_dssp             ---SCCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             ---CCCC-CCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCH
Confidence               8876 5666666665432  110000                        012467889999999999999999999


Q ss_pred             HHHhcCccccccCCC
Q psy9736         369 SLLLKHPFLKIARPL  383 (400)
Q Consensus       369 ~~~l~hp~~~~~~~~  383 (400)
                      +|+|+||||++...+
T Consensus       278 ~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         278 KAALAHPFFQDVTKP  292 (298)
T ss_dssp             HHHHTSGGGTTCCCC
T ss_pred             HHHhCCHhhccCCCC
Confidence            999999999975543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=337.97  Aligned_cols=247  Identities=15%  Similarity=0.222  Sum_probs=201.9

Q ss_pred             CCcceEEEEEecC--CCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSD--DRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~--~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.|+++.  +......||+|.+....  ....++|.+|+.++++++|+||+++++++.. +..++||||+++|+
T Consensus        15 iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~   93 (277)
T d1xbba_          15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGP   93 (277)
T ss_dssp             EEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             cccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCc
Confidence            6999999999985  55566789999886432  2235779999999999999999999999865 45789999999999


Q ss_pred             hHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          77 LTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        77 L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      |.+++... .+++..+..++.||+.||.|||+++|+||||||+||+++.++.++++|||  +++.........       
T Consensus        94 L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFG--la~~~~~~~~~~-------  164 (277)
T d1xbba_          94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG--LSKALRADENYY-------  164 (277)
T ss_dssp             HHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT--TCEECCTTCSEE-------
T ss_pred             HHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchh--hhhhcccccccc-------
Confidence            99998764 69999999999999999999999999999999999999999999999999  444221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (277)
T d1xbba_         165 --------------------------------------------------------------------------------  164 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......||+.|+|||++.+..++..+|+||+|+++|||++ |..      
T Consensus       165 -----------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~------  209 (277)
T d1xbba_         165 -----------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK------  209 (277)
T ss_dssp             -----------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCC------
T ss_pred             -----------------------------ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCC------
Confidence                                         00223468899999999999888889999999999999997 776      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH---hcCcccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL---LKHPFLK  378 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~---l~hp~~~  378 (400)
                         ||.. .+..+....+.++..+..  +..+++.+.+||.+||+.||++|||++++   |+|+|++
T Consensus       210 ---Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         210 ---PYRG-MKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             ---SSTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence               8876 667777777777766555  44589999999999999999999999998   5777754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-45  Score=347.19  Aligned_cols=243  Identities=19%  Similarity=0.236  Sum_probs=196.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHh-CCCCCcccccceeEe----CCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLV----GEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++.+..+...||+|++..     .+.+.+|+.++.+ .+|+||++++++|.+    +..+|+|||||+||
T Consensus        20 lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg   94 (335)
T d2ozaa1          20 LGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG   94 (335)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCC
Confidence            6999999999999988889999998742     2457889998765 589999999999976    45789999999999


Q ss_pred             ChHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhh
Q psy9736          76 SLTDVVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        76 ~L~~~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      +|.+++...   .+++..++.++.||+.||.|||+.||+||||||+||+++.   .+.++|+|||  ++......     
T Consensus        95 ~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG--~a~~~~~~-----  167 (335)
T d2ozaa1          95 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG--FAKETTSH-----  167 (335)
T ss_dssp             EHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCT--TCEECCCC-----
T ss_pred             cHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccc--eeeeccCC-----
Confidence            999999753   6999999999999999999999999999999999999986   4679999999  44311100     


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (335)
T d2ozaa1         168 --------------------------------------------------------------------------------  167 (335)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCc
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ....+.+||+.|+|||++.+..++..+|+||+||++|+|++|.. 
T Consensus       168 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~-  211 (335)
T d2ozaa1         168 -----------------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP-  211 (335)
T ss_dssp             -----------------------------------CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSC-
T ss_pred             -----------------------------------CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCC-
Confidence                                               01234479999999999999988899999999999999999987 


Q ss_pred             ccccccccCcchhhcHHHHHHHHH---hCCCCCc--chhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccccc
Q psy9736         310 SFQPHFLIPYLFILSCRQALYLIA---TNKKPEI--KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA  380 (400)
Q Consensus       310 s~g~~~~~P~~~~~~~~~~~~~i~---~~~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~  380 (400)
                              ||.. .+.......+.   ......+  +.+..+|+.+.+||++||+.||++|||++|+|+||||++.
T Consensus       212 --------Pf~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         212 --------PFYS-NHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             --------SCEE-TTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             --------CCCC-CCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence                    8876 33322222222   1112222  2235689999999999999999999999999999999753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=334.58  Aligned_cols=245  Identities=13%  Similarity=0.203  Sum_probs=204.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++..+ ...+||+|.+..... ..+.|.+|+.++++++|+||+++++++. ++..++||||+++|+|.++
T Consensus        21 iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~   97 (272)
T d1qpca_          21 LGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDF   97 (272)
T ss_dssp             EEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHH
T ss_pred             EecCCCcEEEEEEEC-CCCEEEEEEEccCcC-CHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHH
Confidence            689999999999864 346799998865443 5677999999999999999999999875 4567999999999999987


Q ss_pred             Hhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +...   .+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||  +++.......           
T Consensus        98 ~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFG--la~~~~~~~~-----------  164 (272)
T d1qpca_          98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG--LARLIEDNEY-----------  164 (272)
T ss_dssp             TTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCT--TCEECSSSCE-----------
T ss_pred             HhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeecccc--ceEEccCCcc-----------
Confidence            7532   69999999999999999999999999999999999999999999999999  4442111000           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (272)
T d1qpca_         165 --------------------------------------------------------------------------------  164 (272)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                 .......||+.|+|||++....++..+|+||+|+++|||++|..         
T Consensus       165 ---------------------------~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~---------  208 (272)
T d1qpca_         165 ---------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR---------  208 (272)
T ss_dssp             ---------------------------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTC---------
T ss_pred             ---------------------------ccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCC---------
Confidence                                       00223468899999999998888889999999999999999765         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc--Cccccc
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK--HPFLKI  379 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~--hp~~~~  379 (400)
                      |+....+..+....+..+..+..  +..+++.+.+||.+||+.||++|||++++++  |+||..
T Consensus       209 ~~~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         209 IPYPGMTNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCC--cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            76666777788888877765554  4468899999999999999999999999988  788864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-44  Score=331.66  Aligned_cols=241  Identities=19%  Similarity=0.202  Sum_probs=198.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++.... ...||+|++..... ..+.|.+|+.++++++|+||+++++++..++..++||||+++|+|.++
T Consensus        13 iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~~-~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~   90 (263)
T d1sm2a_          13 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   90 (263)
T ss_dssp             EECCSSCCEEEEEETT-TEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             EeeCCCeEEEEEEECC-CCEEEEEEECCCcC-cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHH
Confidence            6899999999997543 35699998875443 567899999999999999999999999988999999999999999998


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  ++.........           
T Consensus        91 l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFG--la~~~~~~~~~-----------  157 (263)
T d1sm2a_          91 LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG--MTRFVLDDQYT-----------  157 (263)
T ss_dssp             HHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------------
T ss_pred             hhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccc--hheeccCCCce-----------
Confidence            864  368999999999999999999999999999999999999999999999999  44422111100           


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       158 --------------------------------------------------------------------------------  157 (263)
T d1sm2a_         158 --------------------------------------------------------------------------------  157 (263)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccccccC
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLIP  318 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~P  318 (400)
                                                 ......||+.|+|||++.+..++..+|+||+|+++|||+++..         |
T Consensus       158 ---------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~---------~  201 (263)
T d1sm2a_         158 ---------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK---------I  201 (263)
T ss_dssp             ----------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC---------C
T ss_pred             ---------------------------eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCC---------C
Confidence                                       0122368999999999999989899999999999999999654         6


Q ss_pred             cchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         319 YLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       319 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +....+..+....+..+..+..  +...++.+.+||.+||+.||++|||++|+++|
T Consensus       202 ~~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         202 PYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             TTCSCCHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            6665777788888888765544  34578899999999999999999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-44  Score=333.70  Aligned_cols=248  Identities=18%  Similarity=0.234  Sum_probs=203.5

Q ss_pred             CCcceEEEEEecCC--CceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDD--RRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~--~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|+.||++..  ......||+|.+.... ....++|.+|+.++++++|+||+++++++.. +.+|+||||+++|+|
T Consensus        17 iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L   95 (285)
T d1u59a_          17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPL   95 (285)
T ss_dssp             EECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEH
T ss_pred             EecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcH
Confidence            69999999999843  3344578888876443 3345789999999999999999999999865 458999999999999


Q ss_pred             HHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccc
Q psy9736          78 TDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDW  155 (400)
Q Consensus        78 ~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~  155 (400)
                      .+++..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  +++.........       
T Consensus        96 ~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFG--la~~~~~~~~~~-------  166 (285)
T d1u59a_          96 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG--LSKALGADDSYY-------  166 (285)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCT--TCEECTTCSCEE-------
T ss_pred             HHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccch--hhhccccccccc-------
Confidence            998753  469999999999999999999999999999999999999999999999999  444221111000       


Q ss_pred             ccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCC
Q psy9736         156 TAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSN  235 (400)
Q Consensus       156 ~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  235 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (285)
T d1u59a_         167 --------------------------------------------------------------------------------  166 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccccc
Q psy9736         236 TTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPH  314 (400)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~  314 (400)
                                                   .......||+.|+|||++....++..+|+||+|+++|||++ |..      
T Consensus       167 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~------  211 (285)
T d1u59a_         167 -----------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK------  211 (285)
T ss_dssp             -----------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC------
T ss_pred             -----------------------------ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCC------
Confidence                                         01233468999999999998888899999999999999998 776      


Q ss_pred             cccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHH---hcCccccc
Q psy9736         315 FLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLL---LKHPFLKI  379 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~---l~hp~~~~  379 (400)
                         ||.. .+..+....+.++..+..  +.++++.+.+||.+||+.||++|||+.++   |+|+|+..
T Consensus       212 ---Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         212 ---PYKK-MKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             ---TTTT-CCTHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ---CCCC-CCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence               8876 566677777887766555  34589999999999999999999999887   77888764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-45  Score=337.84  Aligned_cols=240  Identities=18%  Similarity=0.254  Sum_probs=196.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------chHHHHHHHHHHHHhCC--CCCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------PKKELIINEILVMRENK--HPNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~Ei~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|+.||++.+..++..||+|.+.....      ....++.+|+.++++++  |+||++++++|.+++..++||||+
T Consensus        12 lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~   91 (273)
T d1xwsa_          12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP   91 (273)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEec
Confidence            6999999999999888888899998753311      11234678999999986  899999999999999999999999


Q ss_pred             CC-CChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCC-CceEEeccchhhhhhhccccchhh
Q psy9736          73 PG-GSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLD-GSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        73 ~~-~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      .+ +++.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||+++.+ +.++|+|||  ++...    ..  
T Consensus        92 ~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG--~a~~~----~~--  163 (273)
T d1xwsa_          92 EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALL----KD--  163 (273)
T ss_dssp             SSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT--TCEEC----CS--
T ss_pred             cCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccc--cceec----cc--
Confidence            75 577777764 479999999999999999999999999999999999999855 799999999  33310    00  


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       164 --------------------------------------------------------------------------------  163 (273)
T d1xwsa_         164 --------------------------------------------------------------------------------  163 (273)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCC-cccCCCCccchhhhhcCCCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKN-QTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                         ...++..||+.|+|||++.+..+. ..+|+||+||++|||++|..
T Consensus       164 -----------------------------------~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~  208 (273)
T d1xwsa_         164 -----------------------------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  208 (273)
T ss_dssp             -----------------------------------SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------------------------ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCC
Confidence                                               012345799999999999887665 56899999999999999987


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                               ||....       .+.++...   .+.++|+.+.+||++||+.||++|||++|+|+||||++...
T Consensus       209 ---------Pf~~~~-------~i~~~~~~---~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         209 ---------PFEHDE-------EIIRGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             ---------SCCSHH-------HHHHCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             ---------CCCCch-------HHhhcccC---CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence                     887631       23444322   23458899999999999999999999999999999997544

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-44  Score=336.59  Aligned_cols=246  Identities=13%  Similarity=0.196  Sum_probs=195.6

Q ss_pred             CCcceEEEEEecCCCce---eEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRF---FSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~---~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++.....   ...||+|.+.... ....+.|.+|+.++++++|+||+++++++..++.+++|||||++|+
T Consensus        34 lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~  113 (299)
T d1jpaa_          34 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS  113 (299)
T ss_dssp             EEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred             EeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCc
Confidence            68999999999875443   3458888876543 3345679999999999999999999999999999999999999999


Q ss_pred             hHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      |.+++...  .+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  +++.........      
T Consensus       114 L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG--la~~~~~~~~~~------  185 (299)
T d1jpaa_         114 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFG--LSRFLEDDTSDP------  185 (299)
T ss_dssp             HHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------
T ss_pred             ceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcc--cceEccCCCCcc------
Confidence            99988753  68999999999999999999999999999999999999999999999999  554322211111      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (299)
T d1jpaa_         186 --------------------------------------------------------------------------------  185 (299)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                  .........||+.|+|||++.+..+...+|+||+|+++|||++ |..     
T Consensus       186 ----------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~-----  232 (299)
T d1jpaa_         186 ----------------------------TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER-----  232 (299)
T ss_dssp             --------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred             ----------------------------eeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCC-----
Confidence                                        0000122357899999999999888899999999999999998 776     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||.. .+..+....+.++..+..  +.++++.+.+||.+||+.||++|||++|++++
T Consensus       233 ----Pf~~-~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         233 ----PYWD-MTNQDVINAIEQDYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             ----TTTT-CCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                7776 677777777877754443  45588999999999999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-43  Score=338.25  Aligned_cols=245  Identities=19%  Similarity=0.275  Sum_probs=193.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCC------EEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGE------ELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------~~~lv~e~~   72 (400)
                      ||+|+|++||++.+..++..||+|.+....  ....+++.+|+.+|++++|+||++++++|...+      .+|+||||+
T Consensus        26 lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~  105 (346)
T d1cm8a_          26 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM  105 (346)
T ss_dssp             C------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc
Confidence            799999999999998889999999987432  234567899999999999999999999997654      579999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                       +.+|..+++.+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++++|||  .+...    ..     
T Consensus       106 -~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg--~a~~~----~~-----  173 (346)
T d1cm8a_         106 -GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG--LARQA----DS-----  173 (346)
T ss_dssp             -SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEEC----CS-----
T ss_pred             -cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccccccccccc--ceecc----CC-----
Confidence             6788888888899999999999999999999999999999999999999999999999999  33311    00     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       174 --------------------------------------------------------------------------------  173 (346)
T d1cm8a_         174 --------------------------------------------------------------------------------  173 (346)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~  311 (400)
                                                       ..+...||+.|+|||++.+. .+...+|+||+||++|+|++|..   
T Consensus       174 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~---  217 (346)
T d1cm8a_         174 ---------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT---  217 (346)
T ss_dssp             ---------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC---
T ss_pred             ---------------------------------ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcC---
Confidence                                             02334789999999998764 44578999999999999999986   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhC--C-------------------------CCCc-chhhhhcHHHHHHHHHhhhhhhh
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATN--K-------------------------KPEI-KEKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~--~-------------------------~~~~-~~~~~~s~~~~dli~~~L~~dP~  363 (400)
                            ||.. .+....+..+.+.  .                         ...+ ....+.++.+.|||++||+.||+
T Consensus       218 ------pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~  290 (346)
T d1cm8a_         218 ------LFKG-SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE  290 (346)
T ss_dssp             ------SSCC-SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTT
T ss_pred             ------CCCC-CChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChh
Confidence                  7765 3444433333221  0                         0000 01134678899999999999999


Q ss_pred             hhhcHHHHhcCcccccc
Q psy9736         364 TRASASLLLKHPFLKIA  380 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~  380 (400)
                      +|||++|+|+||||+..
T Consensus       291 ~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         291 QRVTAGEALAHPYFESL  307 (346)
T ss_dssp             TSCCHHHHHHSGGGTTT
T ss_pred             HCcCHHHHhcChhhCcC
Confidence            99999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-43  Score=324.28  Aligned_cols=240  Identities=19%  Similarity=0.252  Sum_probs=203.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||+++.+ ....||+|.++.... ..+.|.+|+.++++++|+||+++++++.+++.+++||||+++|+|.++
T Consensus        12 iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~   89 (258)
T d1k2pa_          12 LGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY   89 (258)
T ss_dssp             CCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHH
T ss_pred             EecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHh
Confidence            799999999999864 456788888875443 557899999999999999999999999999999999999999999988


Q ss_pred             Hhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccc
Q psy9736          81 VTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAV  158 (400)
Q Consensus        81 i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  158 (400)
                      +..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++........            
T Consensus        90 ~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG--~a~~~~~~~~------------  155 (258)
T d1k2pa_          90 LREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG--LSRYVLDDEY------------  155 (258)
T ss_dssp             HHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCS--SCCBCSSSSC------------
T ss_pred             hhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcch--hheeccCCCc------------
Confidence            653  478999999999999999999999999999999999999999999999999  4431111000            


Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTTD  238 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (258)
T d1k2pa_         156 --------------------------------------------------------------------------------  155 (258)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccccc
Q psy9736         239 EKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHFLI  317 (400)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~~~  317 (400)
                                                .......||+.|+|||++.+..++..+|+||+|+++|||++ |..         
T Consensus       156 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~---------  200 (258)
T d1k2pa_         156 --------------------------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM---------  200 (258)
T ss_dssp             --------------------------CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC---------
T ss_pred             --------------------------eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCC---------
Confidence                                      00112368899999999999999899999999999999998 665         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      ||.. .+..+....+.++.....  +...++.+.+||.+||+.||++|||++++++|
T Consensus       201 Pf~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         201 PYER-FTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             TTTT-SCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCC-CCHHHHHHHHHhCCCCCC--cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            7776 677788888887755444  45688899999999999999999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-43  Score=335.57  Aligned_cols=259  Identities=19%  Similarity=0.243  Sum_probs=198.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEe--------CCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV--------GEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--------~~~~~lv~e   70 (400)
                      ||+|+|++||++.+...+..||+|++.....  ...+++.+|+.+|++++|+||+++++++..        ++.+|++||
T Consensus        18 LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e   97 (318)
T d3blha1          18 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD   97 (318)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEE
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEe
Confidence            6999999999999988889999998764432  334678899999999999999999998864        346899999


Q ss_pred             ccCCCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhh
Q psy9736          71 YLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        71 ~~~~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      |++++.+...... ..+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++++|||  ++.......... 
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg--~~~~~~~~~~~~-  174 (318)
T d3blha1          98 FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG--LARAFSLAKNSQ-  174 (318)
T ss_dssp             CCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT--TCEECCC------
T ss_pred             ccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecc--eeeecccccccc-
Confidence            9977665544443 378999999999999999999999999999999999999999999999999  443221111100 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (318)
T d3blha1         175 --------------------------------------------------------------------------------  174 (318)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                        .....+.+||+.|+|||++.+. .++..+|+||+|+++|||++|..
T Consensus       175 ----------------------------------~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~  220 (318)
T d3blha1         175 ----------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP  220 (318)
T ss_dssp             ----------------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------------------------cccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCC
Confidence                                              0113345899999999998765 56688999999999999999986


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhC---CCCCc---------------------ch-----hhhhcHHHHHHHHHhhh
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATN---KKPEI---------------------KE-----KEKLSQIFQDFLDQCLE  359 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~---~~~~~---------------------~~-----~~~~s~~~~dli~~~L~  359 (400)
                               ||.. .+....+..+.+.   ..+..                     ..     ....++.+.|||.+||+
T Consensus       221 ---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~  290 (318)
T d3blha1         221 ---------IMQG-NTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV  290 (318)
T ss_dssp             ---------SCCC-SSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSC
T ss_pred             ---------CCCC-CCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCc
Confidence                     8765 4444444443221   11100                     00     11236678999999999


Q ss_pred             hhhhhhhcHHHHhcCccccccCCCCCc
Q psy9736         360 EEVETRASASLLLKHPFLKIARPLASL  386 (400)
Q Consensus       360 ~dP~~R~s~~~~l~hp~~~~~~~~~~l  386 (400)
                      +||++|||++|+|+||||+..+.+++|
T Consensus       291 ~dP~~R~sa~elL~Hpff~~~p~p~~~  317 (318)
T d3blha1         291 LDPAQRIDSDDALNHDFFWSDPMPSDL  317 (318)
T ss_dssp             SSTTTSCCHHHHHHSGGGSSSSCCCCC
T ss_pred             CChhHCcCHHHHHcChhhccCCCCCCC
Confidence            999999999999999999987777766

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-43  Score=328.15  Aligned_cols=242  Identities=19%  Similarity=0.321  Sum_probs=191.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEecccccc--CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLA--QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.||+++.+.   .||+|.+...  .....+.|.+|+.++++++|+||+++++++. ++.+++|||||++|+|.
T Consensus        16 lG~G~fg~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~   91 (276)
T d1uwha_          16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLY   91 (276)
T ss_dssp             EEECSSCEEEEEESSS---EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHH
T ss_pred             EeeCCCcEEEEEEECC---EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHH
Confidence            6899999999997554   4788887543  2335678999999999999999999998765 45689999999999999


Q ss_pred             HHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          79 DVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        79 ~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      +++..  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||  ++.........         
T Consensus        92 ~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFG--la~~~~~~~~~---------  160 (276)
T d1uwha_          92 HHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG--LATVKSRWSGS---------  160 (276)
T ss_dssp             HHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCC--CSCC----------------
T ss_pred             HHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEcccc--ceeeccccCCc---------
Confidence            99864  369999999999999999999999999999999999999999999999999  44321111000         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       161 --------------------------------------------------------------------------------  160 (276)
T d1uwha_         161 --------------------------------------------------------------------------------  160 (276)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC---CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK---NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                  ....+..||+.|||||++...   .++..+|+||+|+++|||++|..     
T Consensus       161 ----------------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~-----  207 (276)
T d1uwha_         161 ----------------------------HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-----  207 (276)
T ss_dssp             ---------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ----------------------------ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCC-----
Confidence                                        012345789999999998753   35577899999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCC-CCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKK-PEIK-EKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||....+.......+.++.. +.+. .+.++++.+.+||.+||+.||++|||+++++++
T Consensus       208 ----Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         208 ----PYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             ----TTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                99874444444444555432 2222 235678899999999999999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-43  Score=330.40  Aligned_cols=250  Identities=20%  Similarity=0.235  Sum_probs=199.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC---cchHHHHHHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~   73 (400)
                      ||+|+|+.||++.+..++..||+|.+....   ....+++.+|+.+++.++|+||+++++++..+.    .+|+||||++
T Consensus        15 lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~   94 (277)
T d1o6ya_          15 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD   94 (277)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCC
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCC
Confidence            689999999999988888899999886432   223467899999999999999999999988643    4899999999


Q ss_pred             CCChHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          74 GGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        74 ~~~L~~~i~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      |++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++..+++|||  ...........     
T Consensus        95 g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~--~~~~~~~~~~~-----  167 (277)
T d1o6ya_          95 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG--IARAIADSGNS-----  167 (277)
T ss_dssp             EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCT--TCEECC----------
T ss_pred             CCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhh--hhhhhcccccc-----
Confidence            9999988865 479999999999999999999999999999999999999999999999999  32211111000     


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (277)
T d1o6ya_         168 --------------------------------------------------------------------------------  167 (277)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                     .....+.+||+.|+|||++.+..++..+|+||+|+++|||++|..    
T Consensus       168 -------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~----  212 (277)
T d1o6ya_         168 -------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP----  212 (277)
T ss_dssp             ------------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             -------------------------------ccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCC----
Confidence                                           011334589999999999999888899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCC-cchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCcccc
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPE-IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK  378 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~  378 (400)
                           ||.. .+..+....+++..+.. .....++|+.+.+||++||++||++||+..+.+.|+|++
T Consensus       213 -----Pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         213 -----PFTG-DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             -----SCCC-SSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             -----CCCC-cCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence                 8876 67777777777765432 223456899999999999999999999655556677765

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=333.35  Aligned_cols=249  Identities=23%  Similarity=0.273  Sum_probs=194.8

Q ss_pred             CCcceEEEEEecCCCce-eEEEEeccccccCc--chHHHHHHHHHHHHhC---CCCCcccccceeEe-----CCEEEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRF-FSKILSNPITLAQQ--PKKELIINEILVMREN---KHPNIVNYLDSYLV-----GEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~~~~~~~~-----~~~~~lv~   69 (400)
                      ||+|+|+.||++.+.++ ...||+|.+.....  .....+.+|+.+++.+   +|+||++++++|..     +...++++
T Consensus        15 LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~   94 (305)
T d1blxa_          15 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF   94 (305)
T ss_dssp             EEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEE
T ss_pred             EecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEE
Confidence            69999999999987554 45678887754321  1223466788887765   89999999999863     24789999


Q ss_pred             eccCCCChHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccch
Q psy9736          70 EYLPGGSLTDVVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISK  147 (400)
Q Consensus        70 e~~~~~~L~~~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  147 (400)
                      ||+.++.+.....  ...+++..++.++.|++.||.|||+++|+||||||+||+++..+.++|+|||  .+.......  
T Consensus        95 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg--~~~~~~~~~--  170 (305)
T d1blxa_          95 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--LARIYSFQM--  170 (305)
T ss_dssp             ECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC--SCCCCCGGG--
T ss_pred             EeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchh--hhhhhcccc--
Confidence            9998876654433  3468999999999999999999999999999999999999999999999999  332110000  


Q ss_pred             hhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         148 VIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                                                                      
T Consensus       171 --------------------------------------------------------------------------------  170 (305)
T d1blxa_         171 --------------------------------------------------------------------------------  170 (305)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCC
Q psy9736         228 KPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPH  307 (400)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd  307 (400)
                                                            ......||+.|+|||++.+.+++..+|+||+||++|||++|.
T Consensus       171 --------------------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~  212 (305)
T d1blxa_         171 --------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK  212 (305)
T ss_dssp             --------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------------------------cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCC
Confidence                                                  023347999999999999999999999999999999999998


Q ss_pred             CcccccccccCcchhhcHHHHHHHHHhC--CC----------------------CCcchhhhhcHHHHHHHHHhhhhhhh
Q psy9736         308 KWSFQPHFLIPYLFILSCRQALYLIATN--KK----------------------PEIKEKEKLSQIFQDFLDQCLEEEVE  363 (400)
Q Consensus       308 ~ws~g~~~~~P~~~~~~~~~~~~~i~~~--~~----------------------~~~~~~~~~s~~~~dli~~~L~~dP~  363 (400)
                      .         ||.. .+..+.+..+...  .+                      +.......+++.+.|||++||++||+
T Consensus       213 ~---------pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~  282 (305)
T d1blxa_         213 P---------LFRG-SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA  282 (305)
T ss_dssp             C---------SCCC-SSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTT
T ss_pred             C---------CCCC-CCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChh
Confidence            7         8876 5666666665432  00                      00001234678999999999999999


Q ss_pred             hhhcHHHHhcCccccccC
Q psy9736         364 TRASASLLLKHPFLKIAR  381 (400)
Q Consensus       364 ~R~s~~~~l~hp~~~~~~  381 (400)
                      +|||++|+|+||||++..
T Consensus       283 ~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         283 KRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             TSCCHHHHHTSGGGTTCC
T ss_pred             HCcCHHHHhcChhhcCch
Confidence            999999999999998753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-43  Score=329.11  Aligned_cols=247  Identities=20%  Similarity=0.246  Sum_probs=196.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|+.|+++.+. .+..||+|++.....  ...+++.+|+.++++++|+||++++++|..++..+++++|+.++.+.
T Consensus        10 iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~   88 (286)
T d1ob3a_          10 IGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKK   88 (286)
T ss_dssp             EEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHH
T ss_pred             EecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHH
Confidence            699999999999875 557788888765432  23578999999999999999999999999999999999999877666


Q ss_pred             HHHh-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVT-ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .+.. .+.+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++++|||  .+.........          
T Consensus        89 ~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG--~a~~~~~~~~~----------  156 (286)
T d1ob3a_          89 LLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG--LARAFGIPVRK----------  156 (286)
T ss_dssp             HHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTT--HHHHHCC--------------
T ss_pred             HHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccc--cceecccCccc----------
Confidence            6665 3479999999999999999999999999999999999999999999999999  44422111100          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (286)
T d1ob3a_         157 --------------------------------------------------------------------------------  156 (286)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                   .....|++.|+|||.+.+. .++..+|+||+|+++|||++|..        
T Consensus       157 -----------------------------~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~--------  199 (286)
T d1ob3a_         157 -----------------------------YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP--------  199 (286)
T ss_dssp             ----------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC--------
T ss_pred             -----------------------------cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCC--------
Confidence                                         1223578899999998764 44688999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhC--CC------------------------CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHH
Q psy9736         317 IPYLFILSCRQALYLIATN--KK------------------------PEIKEKEKLSQIFQDFLDQCLEEEVETRASASL  370 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~--~~------------------------~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~  370 (400)
                       ||.. .+..+.+.++...  .+                        +.......+++.+.|||++||+.||++|||++|
T Consensus       200 -pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~e  277 (286)
T d1ob3a_         200 -LFPG-VSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ  277 (286)
T ss_dssp             -SCCC-SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             -CCCC-CCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHH
Confidence             8876 5556665555321  00                        000012336789999999999999999999999


Q ss_pred             HhcCccccc
Q psy9736         371 LLKHPFLKI  379 (400)
Q Consensus       371 ~l~hp~~~~  379 (400)
                      +|+||||++
T Consensus       278 ll~Hp~f~~  286 (286)
T d1ob3a_         278 ALEHAYFKE  286 (286)
T ss_dssp             HHTSGGGGC
T ss_pred             HhcCcccCc
Confidence            999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-43  Score=327.31  Aligned_cols=248  Identities=16%  Similarity=0.239  Sum_probs=205.8

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChHHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLTDV   80 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~   80 (400)
                      ||+|+|+.||++..... .+||+|.+..... ..+.|.+|+.++++++|+||+++++++. ++..++||||+++|+|..+
T Consensus        25 iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~-~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~  101 (285)
T d1fmka3          25 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF  101 (285)
T ss_dssp             EEECSSCEEEEEEETTT-EEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHH
T ss_pred             EeeCCCeEEEEEEECCC-CEEEEEEECcccC-CHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhh
Confidence            68999999999987655 4699999875544 5678999999999999999999999985 4567899999999999988


Q ss_pred             Hhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          81 VTE---TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        81 i~~---~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      +..   ..+++..++.++.||+.||.|||+.+|+||||||+||+++.++.++|+|||  +++........          
T Consensus       102 ~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfG--la~~~~~~~~~----------  169 (285)
T d1fmka3         102 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG--LARLIEDNEYT----------  169 (285)
T ss_dssp             HSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCC--TTC------------------
T ss_pred             hhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccc--hhhhccCCCce----------
Confidence            763   369999999999999999999999999999999999999999999999999  54422111100          


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       170 --------------------------------------------------------------------------------  169 (285)
T d1fmka3         170 --------------------------------------------------------------------------------  169 (285)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPHFLI  317 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~~  317 (400)
                                                  ......||+.|+|||++.+..+...+|+||+|+++|||++|..         
T Consensus       170 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~---------  212 (285)
T d1fmka3         170 ----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR---------  212 (285)
T ss_dssp             ----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC---------
T ss_pred             ----------------------------eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCC---------
Confidence                                        0122368999999999999999999999999999999999755         


Q ss_pred             CcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc--CccccccCC
Q psy9736         318 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK--HPFLKIARP  382 (400)
Q Consensus       318 P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~--hp~~~~~~~  382 (400)
                      ||....+..+.+..+.++..+..  +..+++.+.+||.+||+.||++|||++++++  |+||.+..+
T Consensus       213 p~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p  277 (285)
T d1fmka3         213 VPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  277 (285)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCC--CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence            77776788888888887765544  4458999999999999999999999999987  899987554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-43  Score=335.21  Aligned_cols=244  Identities=16%  Similarity=0.247  Sum_probs=195.2

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.|++++..     ..+.+||+|.+.... ......+.+|+.+++++ +|+|||++++++.+.+..++|||||+
T Consensus        45 lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~  124 (325)
T d1rjba_          45 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCC  124 (325)
T ss_dssp             EEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             EeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCC
Confidence            689999999998643     335678888875432 23446789999999998 89999999999999999999999999


Q ss_pred             CCChHHHHhhc------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          74 GGSLTDVVTET------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        74 ~~~L~~~i~~~------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      +|+|.+++...                        .+++..++.++.|++.||.|||+++|+||||||+||+++.++.+|
T Consensus       125 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~K  204 (325)
T d1rjba_         125 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVK  204 (325)
T ss_dssp             TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEE
T ss_pred             CCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEE
Confidence            99999998642                        378899999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  +++.........                                                             
T Consensus       205 l~DFG--la~~~~~~~~~~-------------------------------------------------------------  221 (325)
T d1rjba_         205 ICDFG--LARDIMSDSNYV-------------------------------------------------------------  221 (325)
T ss_dssp             ECCCG--GGSCGGGCTTSE-------------------------------------------------------------
T ss_pred             Eeecc--ccccccCCCcee-------------------------------------------------------------
Confidence            99999  554221111000                                                             


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                              ...+..||+.|||||++.+..++.
T Consensus       222 --------------------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~  245 (325)
T d1rjba_         222 --------------------------------------------------------VRGNARLPVKWMAPESLFEGIYTI  245 (325)
T ss_dssp             --------------------------------------------------------EETTEEECGGGCCHHHHHHCCCCH
T ss_pred             --------------------------------------------------------eeccccCCCccCChHHHcCCCCCc
Confidence                                                                    012346899999999999998889


Q ss_pred             ccCCCCccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcH
Q psy9736         290 TTPPTGLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA  368 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~  368 (400)
                      .+|+||+|+++|||++ |..         ||.. .+..+.+..++++.. .++.+..+++.+.+||.+||+.||++|||+
T Consensus       246 ~~DiwS~Gvil~emlt~g~~---------Pf~~-~~~~~~~~~~~~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPt~  314 (325)
T d1rjba_         246 KSDVWSYGILLWEIFSLGVN---------PYPG-IPVDANFYKLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSF  314 (325)
T ss_dssp             HHHHHHHHHHHHHHTTTSCC---------SSTT-CCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             ceeccchhHHHHHHHhCCCC---------CCCC-CCHHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence            9999999999999997 776         8776 444444555554422 222345688999999999999999999999


Q ss_pred             HHHhcC
Q psy9736         369 SLLLKH  374 (400)
Q Consensus       369 ~~~l~h  374 (400)
                      +|+++|
T Consensus       315 ~ei~~~  320 (325)
T d1rjba_         315 PNLTSF  320 (325)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999986

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-43  Score=325.86  Aligned_cols=244  Identities=14%  Similarity=0.162  Sum_probs=198.2

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    +......||+|.+..... ...+.|.+|+.++++++|+||+++++++...+..++++||+.++
T Consensus        15 iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~   94 (283)
T d1mqba_          15 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG   94 (283)
T ss_dssp             EEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             EeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccC
Confidence            6899999998875    334456799998864432 34567899999999999999999999999989999999999999


Q ss_pred             ChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      ++.+.+..  ..+++..+..++.|++.|+.|||+++|+||||||+||+++.++.+||+|||  +++.........     
T Consensus        95 ~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFG--la~~~~~~~~~~-----  167 (283)
T d1mqba_          95 ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG--LSRVLEDDPEAT-----  167 (283)
T ss_dssp             EHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCC--C----------------
T ss_pred             cchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccc--hhhcccCCCccc-----
Confidence            99988764  369999999999999999999999999999999999999999999999999  554221111100     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       168 --------------------------------------------------------------------------------  167 (283)
T d1mqba_         168 --------------------------------------------------------------------------------  167 (283)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                     .......||+.|+|||++.+..+...+|+||+|+++|||+++..     
T Consensus       168 -------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~-----  211 (283)
T d1mqba_         168 -------------------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE-----  211 (283)
T ss_dssp             -------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC-----
T ss_pred             -------------------------------eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCC-----
Confidence                                           00122368999999999999988899999999999999999766     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                          |+....+..+.+..+..+..+..  +.+++..+.+||.+||+.||++|||+.|+++
T Consensus       212 ----~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         212 ----RPYWELSNHEVMKAINDGFRLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             ----CTTTTCCHHHHHHHHHTTCCCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----CccccCCHHHHHHHHhccCCCCC--chhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                77776777777777777755544  4458899999999999999999999999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-42  Score=331.96  Aligned_cols=253  Identities=18%  Similarity=0.205  Sum_probs=194.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCC-----EEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGE-----ELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~~   74 (400)
                      ||+|+|++|+++.+..+...||+|.+.... ....+++.+|+.+|++++|+||+++++++..+.     .++++ +|+.+
T Consensus        16 LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~-~~~~~   94 (345)
T d1pmea_          16 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMG   94 (345)
T ss_dssp             CC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE-EECCC
T ss_pred             EeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE-EeecC
Confidence            799999999999988888899999886443 334567899999999999999999999987543     34555 55568


Q ss_pred             CChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          75 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        75 ~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      ++|.+++..+.+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||  ++..........      
T Consensus        95 g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG--~a~~~~~~~~~~------  166 (345)
T d1pmea_          95 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG--LARVADPDHDHT------  166 (345)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT--TCEECCGGGCBC------
T ss_pred             CchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccC--ceeeccCCCccc------
Confidence            999999998899999999999999999999999999999999999999999999999999  443111111000      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       167 --------------------------------------------------------------------------------  166 (345)
T d1pmea_         167 --------------------------------------------------------------------------------  166 (345)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecC-CCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDK-NKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ......+||+.|+|||++... .+....|+||+|+++|+|++|..     
T Consensus       167 ------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~-----  211 (345)
T d1pmea_         167 ------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP-----  211 (345)
T ss_dssp             ------------------------------CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSC-----
T ss_pred             ------------------------------eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCC-----
Confidence                                          012345799999999998554 44578899999999999999987     


Q ss_pred             ccccCcchhhcHHHHHHHHHhC--C-------------------------CCCc-chhhhhcHHHHHHHHHhhhhhhhhh
Q psy9736         314 HFLIPYLFILSCRQALYLIATN--K-------------------------KPEI-KEKEKLSQIFQDFLDQCLEEEVETR  365 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~--~-------------------------~~~~-~~~~~~s~~~~dli~~~L~~dP~~R  365 (400)
                          ||.. .+...........  .                         .... .....+|+.+.+||.+||++||++|
T Consensus       212 ----pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  286 (345)
T d1pmea_         212 ----IFPG-KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR  286 (345)
T ss_dssp             ----SCCC-SSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             ----CCCC-CCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHC
Confidence                7765 3332222222110  0                         0000 0113467789999999999999999


Q ss_pred             hcHHHHhcCccccccCC
Q psy9736         366 ASASLLLKHPFLKIARP  382 (400)
Q Consensus       366 ~s~~~~l~hp~~~~~~~  382 (400)
                      ||++|+|+||||+....
T Consensus       287 ~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         287 IEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             CCHHHHHTSGGGTTTCC
T ss_pred             cCHHHHhcCHhhccCCC
Confidence            99999999999996444

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.4e-42  Score=328.69  Aligned_cols=245  Identities=19%  Similarity=0.257  Sum_probs=195.1

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeC--CEEEEEEeccCCCCh
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVG--EELWVVMEYLPGGSL   77 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~~~~~~L   77 (400)
                      ||+|+|++||++++..+...||+|++...   ..+++.+|+.+|++++ |+||++++++|...  ...++||||+.+++|
T Consensus        43 LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L  119 (328)
T d3bqca1          43 LGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF  119 (328)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBG
T ss_pred             EecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcH
Confidence            69999999999999999999999998643   3467899999999995 99999999999743  569999999999999


Q ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhhccccccc
Q psy9736          78 TDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        78 ~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ..+.+  .+++..++.++.||+.||.|||++||+||||||+||+++.++ .++|+|||  .+......            
T Consensus       120 ~~~~~--~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG--~a~~~~~~------------  183 (328)
T d3bqca1         120 KQLYQ--TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWG--LAEFYHPG------------  183 (328)
T ss_dssp             GGTTT--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGG--GCEECCTT------------
T ss_pred             HHHhc--CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccc--cceeccCC------------
Confidence            77653  589999999999999999999999999999999999998765 68999999  43311000            


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       184 --------------------------------------------------------------------------------  183 (328)
T d3bqca1         184 --------------------------------------------------------------------------------  183 (328)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~  315 (400)
                                                  .......||+.|+|||++.+.. ++..+|+||+||++|||++|..       
T Consensus       184 ----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~-------  228 (328)
T d3bqca1         184 ----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-------  228 (328)
T ss_dssp             ----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS-------
T ss_pred             ----------------------------CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCC-------
Confidence                                        0123347889999999988754 4678899999999999999987       


Q ss_pred             ccCcchhhcHHHHHHHHHhC-------------CC---------------------CCcchhhhhcHHHHHHHHHhhhhh
Q psy9736         316 LIPYLFILSCRQALYLIATN-------------KK---------------------PEIKEKEKLSQIFQDFLDQCLEEE  361 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~-------------~~---------------------~~~~~~~~~s~~~~dli~~~L~~d  361 (400)
                        ||....+.......+...             ..                     ........+++.+.|||++||++|
T Consensus       229 --pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  306 (328)
T d3bqca1         229 --PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD  306 (328)
T ss_dssp             --SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSS
T ss_pred             --CCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCC
Confidence              886644443333332110             00                     001122447889999999999999


Q ss_pred             hhhhhcHHHHhcCccccccC
Q psy9736         362 VETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       362 P~~R~s~~~~l~hp~~~~~~  381 (400)
                      |++|||++|+|+||||+.+.
T Consensus       307 P~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         307 HQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             GGGSCCHHHHHTSGGGTTSC
T ss_pred             hhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999753

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-42  Score=320.67  Aligned_cols=252  Identities=22%  Similarity=0.262  Sum_probs=204.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCChH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGSLT   78 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   78 (400)
                      ||+|+|++||++.+..+...||+|.++...  ....+++.+|+.+++.++|+||+++++++......+++++++.++++.
T Consensus        10 LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~   89 (292)
T d1unla_          10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKK   89 (292)
T ss_dssp             EEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHH
T ss_pred             EecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccccccc
Confidence            699999999999998888889999876443  234678999999999999999999999999999999999999998888


Q ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccccccc
Q psy9736          79 DVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTA  157 (400)
Q Consensus        79 ~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  157 (400)
                      .++... .+++..++.++.|++.||.|||+++|+||||||+||+++.++.++++|||  .+........           
T Consensus        90 ~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG--~a~~~~~~~~-----------  156 (292)
T d1unla_          90 YFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFG--LARAFGIPVR-----------  156 (292)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCT--TCEECCSCCS-----------
T ss_pred             cccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecc--hhhcccCCCc-----------
Confidence            877654 78999999999999999999999999999999999999999999999999  4431111100           


Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCcc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNTT  237 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  237 (400)
                                                                                                      
T Consensus       157 --------------------------------------------------------------------------------  156 (292)
T d1unla_         157 --------------------------------------------------------------------------------  156 (292)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC-CCcccCCCCccchhhhhcCCCCcccccccc
Q psy9736         238 DEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN-KNQTTPPTGLTGSILEFLGPHKWSFQPHFL  316 (400)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~d~~s~g~~~~~~~~gd~ws~g~~~~  316 (400)
                                                  ......+++.|+|||++.... ++..+|+||+||++|||++|..        
T Consensus       157 ----------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~--------  200 (292)
T d1unla_         157 ----------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR--------  200 (292)
T ss_dssp             ----------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSC--------
T ss_pred             ----------------------------cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCC--------
Confidence                                        112235677899999988765 4578999999999999999987        


Q ss_pred             cCcchhhcHHHHHHHHHhC--CC------------------------CCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHH
Q psy9736         317 IPYLFILSCRQALYLIATN--KK------------------------PEIKEKEKLSQIFQDFLDQCLEEEVETRASASL  370 (400)
Q Consensus       317 ~P~~~~~~~~~~~~~i~~~--~~------------------------~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~  370 (400)
                       ||....+..+.+..+...  .+                        ........+++.+.|||++||+.||.+||||+|
T Consensus       201 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e  279 (292)
T d1unla_         201 -PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEE  279 (292)
T ss_dssp             -CSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -CCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHH
Confidence             887656655555554321  10                        000112346789999999999999999999999


Q ss_pred             HhcCccccccCC
Q psy9736         371 LLKHPFLKIARP  382 (400)
Q Consensus       371 ~l~hp~~~~~~~  382 (400)
                      +|+||||++-.+
T Consensus       280 ~L~Hp~f~~~~~  291 (292)
T d1unla_         280 ALQHPYFSDFCP  291 (292)
T ss_dssp             HTTSGGGSSCSC
T ss_pred             HhcChhhcCCCC
Confidence            999999987443

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-42  Score=321.28  Aligned_cols=241  Identities=17%  Similarity=0.221  Sum_probs=192.2

Q ss_pred             CCcceEEEEEecCCC---ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDR---RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~---~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++...   .....||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++||||+++|+
T Consensus        15 iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~   93 (273)
T d1mp8a_          15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGE   93 (273)
T ss_dssp             EEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEE
T ss_pred             EeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCc
Confidence            689999999988543   344678888876443 334577999999999999999999999986 567899999999999


Q ss_pred             hHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccc
Q psy9736          77 LTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        77 L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      +.+++..  ..+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||  ++..........      
T Consensus        94 l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG--~a~~~~~~~~~~------  165 (273)
T d1mp8a_          94 LRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDSTYYK------  165 (273)
T ss_dssp             HHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------------------
T ss_pred             HHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccch--hheeccCCccee------
Confidence            9988764  368999999999999999999999999999999999999999999999999  444221111100      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (273)
T d1mp8a_         166 --------------------------------------------------------------------------------  165 (273)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQP  313 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~  313 (400)
                                                      .....||+.|+|||++.+..+...+|+||+|+++|||++ |..     
T Consensus       166 --------------------------------~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~-----  208 (273)
T d1mp8a_         166 --------------------------------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK-----  208 (273)
T ss_dssp             -------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC-----
T ss_pred             --------------------------------ccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCC-----
Confidence                                            123368899999999999988899999999999999998 554     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||.. .+..+....+..+..+.+  +.++++.+.+||.+||..||++|||++|+++|
T Consensus       209 ----P~~~-~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         209 ----PFQG-VKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             ----TTTT-CCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCC-CCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                5555 677777778887765544  44689999999999999999999999999875

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-42  Score=329.44  Aligned_cols=245  Identities=18%  Similarity=0.165  Sum_probs=191.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeC------CEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVG------EELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~   74 (400)
                      ||+|+|++||++++..++..||+|++.....    ...+|+.++++++|+||++++++|...      .++|+||||+++
T Consensus        28 LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~  103 (350)
T d1q5ka_          28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE  103 (350)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSE
T ss_pred             EeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCC
Confidence            6999999999999999899999999865432    235799999999999999999998643      368999999976


Q ss_pred             CChHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCC-ceEEeccchhhhhhhccccchhh
Q psy9736          75 GSLTDVVT----ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDG-SVKLSKWNRFIATKLYIEISKVI  149 (400)
Q Consensus        75 ~~L~~~i~----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~  149 (400)
                      +.+..+..    ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .++|+|||  ++.....    . 
T Consensus       104 ~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG--~a~~~~~----~-  176 (350)
T d1q5ka_         104 TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVR----G-  176 (350)
T ss_dssp             EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCT--TCEECCT----T-
T ss_pred             ccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEeccc--chhhccC----C-
Confidence            53333221    23699999999999999999999999999999999999999875 89999999  3331100    0 


Q ss_pred             ccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         150 IYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       150 ~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                                                                                                      
T Consensus       177 --------------------------------------------------------------------------------  176 (350)
T d1q5ka_         177 --------------------------------------------------------------------------------  176 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceec-CCCCcccCCCCccchhhhhcCCCC
Q psy9736         230 IEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLD-KNKNQTTPPTGLTGSILEFLGPHK  308 (400)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~d~~s~g~~~~~~~~gd~  308 (400)
                                                         ....+..||+.|+|||++.+ ..+....|+||+||++|||++|..
T Consensus       177 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~  221 (350)
T d1q5ka_         177 -----------------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP  221 (350)
T ss_dssp             -----------------------------------SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSC
T ss_pred             -----------------------------------cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCC
Confidence                                               01233478999999998875 456788999999999999999986


Q ss_pred             cccccccccCcchhhcHHHHHHHHHhC--CC-----------------CCc-------chhhhhcHHHHHHHHHhhhhhh
Q psy9736         309 WSFQPHFLIPYLFILSCRQALYLIATN--KK-----------------PEI-------KEKEKLSQIFQDFLDQCLEEEV  362 (400)
Q Consensus       309 ws~g~~~~~P~~~~~~~~~~~~~i~~~--~~-----------------~~~-------~~~~~~s~~~~dli~~~L~~dP  362 (400)
                               ||.. .+..+.+..+.+.  .+                 +..       ....++++.+.|||.+||++||
T Consensus       222 ---------pf~~-~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP  291 (350)
T d1q5ka_         222 ---------IFPG-DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP  291 (350)
T ss_dssp             ---------SSCC-SSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSG
T ss_pred             ---------CCCC-CCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCCh
Confidence                     8866 4555555555321  00                 000       0112468899999999999999


Q ss_pred             hhhhcHHHHhcCccccccC
Q psy9736         363 ETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       363 ~~R~s~~~~l~hp~~~~~~  381 (400)
                      ++|||++|+|+||||+..+
T Consensus       292 ~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         292 TARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             GGSCCHHHHHTSGGGGGGG
T ss_pred             hHCcCHHHHhcCHhhcccc
Confidence            9999999999999998743

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-41  Score=327.89  Aligned_cols=247  Identities=17%  Similarity=0.228  Sum_probs=190.2

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccC--cchHHHHHHHHHHHHhCCCCCcccccceeEe------CCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV------GEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~------~~~~~lv~e~~   72 (400)
                      ||+|+|++||++.+..++..||+|.+....  .....++.+|+.++++++|+||++++++|..      ..++|+|||||
T Consensus        25 LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~  104 (355)
T d2b1pa1          25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM  104 (355)
T ss_dssp             CSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECC
T ss_pred             eecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEecc
Confidence            799999999999998888999999986442  3344678899999999999999999999863      36899999999


Q ss_pred             CCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          73 PGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        73 ~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      .+ ++...+. ..+++..++.++.|++.||.|||+.||+||||||+||+++.++.++++|||  ........        
T Consensus       105 ~~-~l~~~~~-~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~--~~~~~~~~--------  172 (355)
T d2b1pa1         105 DA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTS--------  172 (355)
T ss_dssp             SE-EHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCC--C---------------
T ss_pred             ch-HHHHhhh-cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechh--hhhccccc--------
Confidence            66 4444443 458999999999999999999999999999999999999999999999999  33211000        


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       173 --------------------------------------------------------------------------------  172 (355)
T d2b1pa1         173 --------------------------------------------------------------------------------  172 (355)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                      ...+..+||+.|+|||++.+..+....|+||+||++|+|++|..    
T Consensus       173 --------------------------------~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~----  216 (355)
T d2b1pa1         173 --------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----  216 (355)
T ss_dssp             ----------------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC----
T ss_pred             --------------------------------cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCC----
Confidence                                            01233478999999999999988899999999999999999987    


Q ss_pred             cccccCcchhhcHHHHHHHHHh----------------------CCC-----------------CCcchhhhhcHHHHHH
Q psy9736         313 PHFLIPYLFILSCRQALYLIAT----------------------NKK-----------------PEIKEKEKLSQIFQDF  353 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~----------------------~~~-----------------~~~~~~~~~s~~~~dl  353 (400)
                           ||.. .+.......+..                      +..                 .........|+.+.||
T Consensus       217 -----pF~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  290 (355)
T d2b1pa1         217 -----LFPG-RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL  290 (355)
T ss_dssp             -----SSCC-SSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred             -----CCCC-CCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHH
Confidence                 7765 333333333221                      100                 0111123357789999


Q ss_pred             HHHhhhhhhhhhhcHHHHhcCccccccC
Q psy9736         354 LDQCLEEEVETRASASLLLKHPFLKIAR  381 (400)
Q Consensus       354 i~~~L~~dP~~R~s~~~~l~hp~~~~~~  381 (400)
                      |++||+.||++||||+|+|+||||+...
T Consensus       291 l~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         291 LSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999999998633

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-42  Score=328.46  Aligned_cols=248  Identities=17%  Similarity=0.224  Sum_probs=195.9

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc--chHHHHHHHHHHHHhCCCCCcccccceeEeC-----CEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG-----EELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~   73 (400)
                      ||+|+|++||++.+..++..||+|++.....  ...+++.+|+.+|++++|+||+++++++...     ...+++++|+.
T Consensus        26 LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~  105 (348)
T d2gfsa1          26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  105 (348)
T ss_dssp             CGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeec
Confidence            7999999999999999999999999874432  3446788999999999999999999998643     23455667777


Q ss_pred             CCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          74 GGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        74 ~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +++|.+++..+.+++..++.++.||+.||.|||++||+||||||+||+++.+|.++++|||  .+...    ...     
T Consensus       106 gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg--~a~~~----~~~-----  174 (348)
T d2gfsa1         106 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG--LARHT----DDE-----  174 (348)
T ss_dssp             SEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC------CC----TGG-----
T ss_pred             CCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccc--hhccc----Ccc-----
Confidence            9999999988899999999999999999999999999999999999999999999999999  33211    100     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (348)
T d2gfsa1         175 --------------------------------------------------------------------------------  174 (348)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCC-CcccCCCCccchhhhhcCCCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNK-NQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                       ..+..||+.|+|||++.+..+ +..+|+||+|+++|+|++|..    
T Consensus       175 ---------------------------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~----  217 (348)
T d2gfsa1         175 ---------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT----  217 (348)
T ss_dssp             ---------------------------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSC----
T ss_pred             ---------------------------------cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCC----
Confidence                                             123367888999998776544 578899999999999999986    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCC-------------------------Ccc---hhhhhcHHHHHHHHHhhhhhhhh
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKP-------------------------EIK---EKEKLSQIFQDFLDQCLEEEVET  364 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~-------------------------~~~---~~~~~s~~~~dli~~~L~~dP~~  364 (400)
                           ||.. .+.......+.+....                         ...   .....++.+.|||++||+.||++
T Consensus       218 -----pF~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  291 (348)
T d2gfsa1         218 -----LFPG-TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  291 (348)
T ss_dssp             -----SCCC-SSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             -----CCCC-CCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhh
Confidence                 8766 4444444444322110                         000   01246788999999999999999


Q ss_pred             hhcHHHHhcCccccccCC
Q psy9736         365 RASASLLLKHPFLKIARP  382 (400)
Q Consensus       365 R~s~~~~l~hp~~~~~~~  382 (400)
                      |||++|+|+||||++...
T Consensus       292 R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         292 RITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             SCCHHHHHTSGGGTTTCC
T ss_pred             CcCHHHHhcCHhhCCCCC
Confidence            999999999999997443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-41  Score=321.14  Aligned_cols=242  Identities=14%  Similarity=0.228  Sum_probs=193.5

Q ss_pred             CCcceEEEEEecC----CCceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSD----DRRFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~----~~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~   75 (400)
                      ||+|+|+.||++.    ++.++.+||+|.+.... ....+.|.+|+.++++++|+||+++++++.++ ..+++++|+.++
T Consensus        17 lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~   95 (317)
T d1xkka_          17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFG   95 (317)
T ss_dssp             EEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTC
T ss_pred             EecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCC
Confidence            6899999999884    45567789999876432 33567899999999999999999999999865 567788898899


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+.+...  .+++..++.++.||+.||.|||+++|+||||||+||+++.++.+||+|||  ++..........     
T Consensus        96 ~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFG--la~~~~~~~~~~-----  168 (317)
T d1xkka_          96 CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG--LAKLLGAEEKEY-----  168 (317)
T ss_dssp             BHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCS--HHHHTTTTCC-------
T ss_pred             cccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccc--cceecccccccc-----
Confidence            998877643  79999999999999999999999999999999999999999999999999  554221111100     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (317)
T d1xkka_         169 --------------------------------------------------------------------------------  168 (317)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCcccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQ  312 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g  312 (400)
                                                      ......||+.|+|||++.+..++..+|+||+|+++|||++ |..    
T Consensus       169 --------------------------------~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~----  212 (317)
T d1xkka_         169 --------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----  212 (317)
T ss_dssp             --------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC----
T ss_pred             --------------------------------cccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCC----
Confidence                                            0122368999999999999988899999999999999998 554    


Q ss_pred             cccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         313 PHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       313 ~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                           ||.. .+..+....+.++..+..  +..+++.+.+||.+||+.||++|||+.|+++|
T Consensus       213 -----p~~~-~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         213 -----PYDG-IPASEISSILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             -----TTTT-SCGGGHHHHHHHTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCC-CCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                 5544 556666666667655444  44588999999999999999999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-41  Score=316.78  Aligned_cols=243  Identities=15%  Similarity=0.254  Sum_probs=203.2

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccCcc-hHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||+++.     ......||+|.+...... ..++|.+|+.++++++|+||+++++++...+..++++||+++
T Consensus        21 lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~  100 (301)
T d1lufa_          21 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY  100 (301)
T ss_dssp             EEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCC
Confidence            68999999999963     345678999998755433 356799999999999999999999999999999999999999


Q ss_pred             CChHHHHhhc-------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceE
Q psy9736          75 GSLTDVVTET-------------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVK  129 (400)
Q Consensus        75 ~~L~~~i~~~-------------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~  129 (400)
                      ++|.+++...                         .+++..+..++.|++.||.|||+++++||||||+||+++.++.+|
T Consensus       101 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~K  180 (301)
T d1lufa_         101 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVK  180 (301)
T ss_dssp             CBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred             CcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEE
Confidence            9999988531                         378889999999999999999999999999999999999999999


Q ss_pred             EeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccc
Q psy9736         130 LSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELW  209 (400)
Q Consensus       130 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (400)
                      |+|||  +++.........                                                             
T Consensus       181 l~DFG--ls~~~~~~~~~~-------------------------------------------------------------  197 (301)
T d1lufa_         181 IADFG--LSRNIYSADYYK-------------------------------------------------------------  197 (301)
T ss_dssp             ECCCS--CHHHHTGGGCBC-------------------------------------------------------------
T ss_pred             Eccch--hheeccCCcccc-------------------------------------------------------------
Confidence            99999  544221111000                                                             


Q ss_pred             eeeeecccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCc
Q psy9736         210 NIVNYLDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQ  289 (400)
Q Consensus       210 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  289 (400)
                                                                              ...+..||+.|+|||++.+..++.
T Consensus       198 --------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~t~  221 (301)
T d1lufa_         198 --------------------------------------------------------ADGNDAIPIRWMPPESIFYNRYTT  221 (301)
T ss_dssp             ------------------------------------------------------------CCBCGGGCCHHHHHHCCCCH
T ss_pred             --------------------------------------------------------ccCCCCcCcCcCCHHHHccCCCCh
Confidence                                                                    123346889999999999999999


Q ss_pred             ccCCCCccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHH
Q psy9736         290 TTPPTGLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASAS  369 (400)
Q Consensus       290 ~~d~~s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~  369 (400)
                      .+|+||+|+++|||++|..         |++...+..+....+.++..+.+  +..+++.+.+||.+||+.||++|||+.
T Consensus       222 ksDVwS~Gvvl~ell~~~~---------~p~~~~~~~e~~~~v~~~~~~~~--p~~~~~~~~~li~~cl~~~P~~RPt~~  290 (301)
T d1lufa_         222 ESDVWAYGVVLWEIFSYGL---------QPYYGMAHEEVIYYVRDGNILAC--PENCPLELYNLMRLCWSKLPADRPSFC  290 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTTC---------CTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hhhhccchhhHHHHHccCC---------CCCCCCCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCChhHCcCHH
Confidence            9999999999999999865         55555888888888888876655  445888999999999999999999999


Q ss_pred             HHhc
Q psy9736         370 LLLK  373 (400)
Q Consensus       370 ~~l~  373 (400)
                      |+++
T Consensus       291 ev~~  294 (301)
T d1lufa_         291 SIHR  294 (301)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9965

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-41  Score=319.50  Aligned_cols=241  Identities=16%  Similarity=0.215  Sum_probs=198.4

Q ss_pred             CCcceEEEEEecCCCceeE--EEEecccccc-CcchHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFS--KILSNPITLA-QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~--~va~K~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||++....++.  .||+|.+... .....+.+.+|+.+++++ +|+||+++++++..++..++||||+++|+
T Consensus        18 iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~   97 (309)
T d1fvra_          18 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN   97 (309)
T ss_dssp             EECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             EeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCc
Confidence            6999999999997765543  4677776433 233456799999999998 79999999999999999999999999999


Q ss_pred             hHHHHhh-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhh
Q psy9736          77 LTDVVTE-----------------TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIAT  139 (400)
Q Consensus        77 L~~~i~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~  139 (400)
                      |.+++..                 ..+++..+..++.||+.|+.|+|+.+++||||||+||+++.++.+||+|||  ++.
T Consensus        98 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG--~a~  175 (309)
T d1fvra_          98 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSR  175 (309)
T ss_dssp             HHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTT--CEE
T ss_pred             HHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccc--ccc
Confidence            9999853                 258999999999999999999999999999999999999999999999999  433


Q ss_pred             hhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccc
Q psy9736         140 KLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYL  219 (400)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  219 (400)
                      ......                                                                          
T Consensus       176 ~~~~~~--------------------------------------------------------------------------  181 (309)
T d1fvra_         176 GQEVYV--------------------------------------------------------------------------  181 (309)
T ss_dssp             SSCEEC--------------------------------------------------------------------------
T ss_pred             cccccc--------------------------------------------------------------------------
Confidence            111000                                                                          


Q ss_pred             ccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccch
Q psy9736         220 VGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGS  299 (400)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~  299 (400)
                                                                    ......||..|+|||.+.+..++..+|+||+|++
T Consensus       182 ----------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvi  215 (309)
T d1fvra_         182 ----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL  215 (309)
T ss_dssp             ----------------------------------------------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHH
T ss_pred             ----------------------------------------------cccceecCCcccchHHhccCCCCccceeehhHHH
Confidence                                                          0123368899999999999888889999999999


Q ss_pred             hhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         300 ILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       300 ~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|||++|..         |++...+..+....+.++..+..  +.++++.+.+||.+||+.||++|||++++++|
T Consensus       216 l~ell~~~~---------~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         216 LWEIVSLGG---------TPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHHHHTTSC---------CTTTTCCHHHHHHHGGGTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCC---------CCCCCCCHHHHHHHHHhcCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999864         55555788888888887765554  45689999999999999999999999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=314.99  Aligned_cols=246  Identities=15%  Similarity=0.183  Sum_probs=198.0

Q ss_pred             CCcceEEEEEecCCCc---eeEEEEecccccc-CcchHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccCCC
Q psy9736           1 MKRGVTIDRFSSDDRR---FFSKILSNPITLA-QQPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPGG   75 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~---~~~~va~K~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~   75 (400)
                      ||+|+|++||++....   ....||+|.++.. .....++|.+|+.++++++|+||+++++++.. ++..++|||||+++
T Consensus        35 iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g  114 (311)
T d1r0pa_          35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG  114 (311)
T ss_dssp             EEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTC
T ss_pred             EeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecC
Confidence            6999999999876433   2345788887643 33455789999999999999999999999765 46899999999999


Q ss_pred             ChHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcccc
Q psy9736          76 SLTDVVTET--CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCW  153 (400)
Q Consensus        76 ~L~~~i~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  153 (400)
                      +|.+++...  .+++..+..++.|++.|+.|+|+.+|+||||||+||+++.++.++|+|||  ++..........     
T Consensus       115 ~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG--~~~~~~~~~~~~-----  187 (311)
T d1r0pa_         115 DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFG--LARDMYDKEFDS-----  187 (311)
T ss_dssp             BHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSG--GGCCTTTTTCCC-----
T ss_pred             chhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEeccc--chhhcccccccc-----
Confidence            999988754  57788899999999999999999999999999999999999999999999  444221111000     


Q ss_pred             ccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCC
Q psy9736         154 DWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEP  233 (400)
Q Consensus       154 ~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  233 (400)
                                                                                                      
T Consensus       188 --------------------------------------------------------------------------------  187 (311)
T d1r0pa_         188 --------------------------------------------------------------------------------  187 (311)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCccccc
Q psy9736         234 SNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQP  313 (400)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~  313 (400)
                                                    ........||+.|+|||++....++..+|+||+|+++|||++|..     
T Consensus       188 ------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~-----  232 (311)
T d1r0pa_         188 ------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA-----  232 (311)
T ss_dssp             ------------------------------TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC-----
T ss_pred             ------------------------------ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCC-----
Confidence                                          001223468999999999999888899999999999999999877     


Q ss_pred             ccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         314 HFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       314 ~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                          ||....+..+....+..+..+..  +..+++.+.+||.+||+.||++|||+.|+++|
T Consensus       233 ----p~~~~~~~~~~~~~i~~g~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         233 ----PPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ----CSCC------CHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCCCCHHHHHHHHHcCCCCCC--cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                88776777777777888766554  34578899999999999999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=322.70  Aligned_cols=248  Identities=19%  Similarity=0.294  Sum_probs=195.0

Q ss_pred             CCcceEEEEEecC---CCceeEEEEecccccc----CcchHHHHHHHHHHHHhCCC-CCcccccceeEeCCEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLA----QQPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~----~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~   72 (400)
                      ||+|+|++||++.   ++.++..||+|.+...    .....+.+.+|+.++++++| +||+++++++.....+++++||+
T Consensus        32 IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~  111 (322)
T d1vzoa_          32 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI  111 (322)
T ss_dssp             EEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecc
Confidence            6899999999884   3445667777766432    22234667899999999966 79999999999999999999999


Q ss_pred             CCCChHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhcc
Q psy9736          73 PGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIY  151 (400)
Q Consensus        73 ~~~~L~~~i~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  151 (400)
                      .+++|.+++... .+++..++.++.|++.||.|+|+.+|+||||||+||+++.+|.++|+|||  ++..........   
T Consensus       112 ~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG--~a~~~~~~~~~~---  186 (322)
T d1vzoa_         112 NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG--LSKEFVADETER---  186 (322)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSS--EEEECCGGGGGG---
T ss_pred             cccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeecc--chhhhccccccc---
Confidence            999999998754 78999999999999999999999999999999999999999999999999  443221111111   


Q ss_pred             ccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCC
Q psy9736         152 CWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIE  231 (400)
Q Consensus       152 ~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  231 (400)
                                                                                                      
T Consensus       187 --------------------------------------------------------------------------------  186 (322)
T d1vzoa_         187 --------------------------------------------------------------------------------  186 (322)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC--CCcccCCCCccchhhhhcCCCCc
Q psy9736         232 EPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN--KNQTTPPTGLTGSILEFLGPHKW  309 (400)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~d~~s~g~~~~~~~~gd~w  309 (400)
                                                         ..+..||+.|+|||.+....  +...+|+||+||++|||++|.. 
T Consensus       187 -----------------------------------~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~-  230 (322)
T d1vzoa_         187 -----------------------------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS-  230 (322)
T ss_dssp             -----------------------------------GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC-
T ss_pred             -----------------------------------ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC-
Confidence                                               12346888999999997654  3467899999999999999987 


Q ss_pred             ccccccccCcchhh--cHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhh-----cHHHHhcCccccc
Q psy9736         310 SFQPHFLIPYLFIL--SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRA-----SASLLLKHPFLKI  379 (400)
Q Consensus       310 s~g~~~~~P~~~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~-----s~~~~l~hp~~~~  379 (400)
                              ||....  .....+........+.+  +..+|+.+.+||.+||++||++||     |++|+|+||||+.
T Consensus       231 --------PF~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         231 --------PFTVDGEKNSQAEISRRILKSEPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             --------TTSCTTSCCCHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             --------CCCCCCHHHHHHHHHHhcccCCCCC--cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence                    886632  22222222222222333  345899999999999999999999     5899999999976

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-41  Score=314.99  Aligned_cols=245  Identities=18%  Similarity=0.254  Sum_probs=189.4

Q ss_pred             CCcceEEEEEecCC-----CceeEEEEeccccccC-cchHHHHHHHHHHHHhC-CCCCcccccceeEeC-CEEEEEEecc
Q psy9736           1 MKRGVTIDRFSSDD-----RRFFSKILSNPITLAQ-QPKKELIINEILVMREN-KHPNIVNYLDSYLVG-EELWVVMEYL   72 (400)
Q Consensus         1 ~g~G~~~~v~~~~~-----~~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~-~~~~lv~e~~   72 (400)
                      ||+|+|+.||++..     ......||+|.+.... ....+.+.+|..++.++ +|+||+.+++++..+ ..++++||||
T Consensus        21 iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~  100 (299)
T d1ywna1          21 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC  100 (299)
T ss_dssp             EEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECC
T ss_pred             EeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEec
Confidence            68999999998853     3344679999886443 23456678888888876 789999999887654 4689999999


Q ss_pred             CCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccch
Q psy9736          73 PGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        73 ~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~  135 (400)
                      ++|+|.+++...                 .+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+||| 
T Consensus       101 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFG-  179 (299)
T d1ywna1         101 KFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG-  179 (299)
T ss_dssp             TTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC---
T ss_pred             CCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCc-
Confidence            999999998632                 37899999999999999999999999999999999999999999999999 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       +++.......                                                                     
T Consensus       180 -la~~~~~~~~---------------------------------------------------------------------  189 (299)
T d1ywna1         180 -LARDIYKDPD---------------------------------------------------------------------  189 (299)
T ss_dssp             -----CCSCTT---------------------------------------------------------------------
T ss_pred             -chhhcccccc---------------------------------------------------------------------
Confidence             4441111100                                                                     


Q ss_pred             ccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCC
Q psy9736         216 DSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTG  295 (400)
Q Consensus       216 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s  295 (400)
                                                                      ........||+.|+|||++.+..++..+|+||
T Consensus       190 ------------------------------------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS  221 (299)
T d1ywna1         190 ------------------------------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWS  221 (299)
T ss_dssp             ------------------------------------------------SCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             ------------------------------------------------ccccCceeeCccccchhHhhcCCCCcccceee
Confidence                                                            01123457999999999999998989999999


Q ss_pred             ccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         296 LTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       296 ~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                      +|+++|||++|..        .||............+..+..+..  +..+++.+.+||.+||+.||++|||++|+++|
T Consensus       222 ~Gvil~ellt~~~--------~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         222 FGVLLWEIFSLGA--------SPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHHHHHHTTSC--------CSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHhCCC--------CCCCCCCHHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999999998754        156553344445555556655544  44588999999999999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-41  Score=311.70  Aligned_cols=234  Identities=19%  Similarity=0.286  Sum_probs=191.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEe-CCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~   79 (400)
                      ||.|+|+.|+++...  ..+||+|.++..  ...+.+.+|+.++++++|+||+++++++.. ++.+++||||+++|+|.+
T Consensus        15 lG~G~fg~Vy~~~~~--~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~   90 (262)
T d1byga_          15 IGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD   90 (262)
T ss_dssp             EEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHH
T ss_pred             EecCCCeEEEEEEEC--CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHH
Confidence            589999999998764  457999998643  355789999999999999999999998854 456899999999999999


Q ss_pred             HHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccc
Q psy9736          80 VVTET---CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWT  156 (400)
Q Consensus        80 ~i~~~---~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  156 (400)
                      ++...   .+++..++.++.||+.|+.|||+.+++||||||+||+++.++.++++|||  .+....    .         
T Consensus        91 ~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg--~s~~~~----~---------  155 (262)
T d1byga_          91 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG--LTKEAS----S---------  155 (262)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC--C-------------------
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccc--cceecC----C---------
Confidence            98643   58999999999999999999999999999999999999999999999999  333110    0         


Q ss_pred             cccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCCCc
Q psy9736         157 AVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPSNT  236 (400)
Q Consensus       157 ~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  236 (400)
                                                                                                      
T Consensus       156 --------------------------------------------------------------------------------  155 (262)
T d1byga_         156 --------------------------------------------------------------------------------  155 (262)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccccccc
Q psy9736         237 TDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSFQPHF  315 (400)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~g~~~  315 (400)
                                                   ...+..+|+.|+|||++.+..++..+|+||+|+++|||++ |..       
T Consensus       156 -----------------------------~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~-------  199 (262)
T d1byga_         156 -----------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV-------  199 (262)
T ss_dssp             -----------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC-------
T ss_pred             -----------------------------CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCC-------
Confidence                                         0122357789999999999888899999999999999998 453       


Q ss_pred             ccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcC
Q psy9736         316 LIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKH  374 (400)
Q Consensus       316 ~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~h  374 (400)
                        ||.. .+..+....+.++..+.++  .++++.+.+||.+||+.||++|||+.+++++
T Consensus       200 --p~~~-~~~~~~~~~i~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         200 --PYPR-IPLKDVVPRVEKGYKMDAP--DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             --SCTT-SCGGGHHHHHTTTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCC-CCHHHHHHHHHcCCCCCCC--ccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence              5444 6777777778777666654  4588999999999999999999999999873

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=309.64  Aligned_cols=247  Identities=18%  Similarity=0.217  Sum_probs=190.5

Q ss_pred             CCcceEEEEEecC---CCceeEEEEecccccc---CcchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSD---DRRFFSKILSNPITLA---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~---~~~~~~~va~K~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||+++   .......||+|.+...   .....+.|.+|+.++++++|+||+++++++.+ ...++|+||+++
T Consensus        16 iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~   94 (273)
T d1u46a_          16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPL   94 (273)
T ss_dssp             CC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred             EecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecC
Confidence            7999999999885   3233457888887643   23345779999999999999999999999975 467899999999


Q ss_pred             CChHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccc
Q psy9736          75 GSLTDVVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        75 ~~L~~~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      +++.+.+..  +.+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||  ++..........    
T Consensus        95 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfG--l~~~~~~~~~~~----  168 (273)
T d1u46a_          95 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG--LMRALPQNDDHY----  168 (273)
T ss_dssp             CBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT--TCEECCC-CCEE----
T ss_pred             cchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccch--hhhhcccCCCcc----
Confidence            999987753  369999999999999999999999999999999999999999999999999  444221111100    


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       169 --------------------------------------------------------------------------------  168 (273)
T d1u46a_         169 --------------------------------------------------------------------------------  168 (273)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcC-CCCccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLG-PHKWSF  311 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~-gd~ws~  311 (400)
                                                      .......||+.|+|||++.+..++..+|+||+|+++|||++ |..   
T Consensus       169 --------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~---  213 (273)
T d1u46a_         169 --------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE---  213 (273)
T ss_dssp             --------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC---
T ss_pred             --------------------------------eecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCC---
Confidence                                            01223357889999999999888888999999999999997 765   


Q ss_pred             ccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccc
Q psy9736         312 QPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI  379 (400)
Q Consensus       312 g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~  379 (400)
                            ||.. .+..+....+.+... ..+.+..++..+.+||.+||+.||++|||++++++  +|++
T Consensus       214 ------Pf~~-~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~--~L~~  271 (273)
T d1u46a_         214 ------PWIG-LNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD--FLLE  271 (273)
T ss_dssp             ------TTTT-CCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             ------CCCC-cCHHHHHHHHHhCCC-CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH--HHHh
Confidence                  8766 777788777776632 22334568899999999999999999999999863  4443

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-40  Score=309.07  Aligned_cols=242  Identities=16%  Similarity=0.266  Sum_probs=194.3

Q ss_pred             CCcceEEEEEecCCCce-------eEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEec
Q psy9736           1 MKRGVTIDRFSSDDRRF-------FSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEY   71 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~-------~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   71 (400)
                      ||+|+|+.||+++....       ...||+|.+..... .....+.+|...+.++ +|+||+++++++..++..++||||
T Consensus        21 iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~  100 (299)
T d1fgka_          21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY  100 (299)
T ss_dssp             CC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             EeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEc
Confidence            79999999999864332       35799999875543 3447788899999887 899999999999999999999999


Q ss_pred             cCCCChHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          72 LPGGSLTDVVTET-----------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        72 ~~~~~L~~~i~~~-----------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++|+|.+++...                 .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||
T Consensus       101 ~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg  180 (299)
T d1fgka_         101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFG  180 (299)
T ss_dssp             CTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTT
T ss_pred             cCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccch
Confidence            9999999999632                 38999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .+.........                                                                   
T Consensus       181 --~~~~~~~~~~~-------------------------------------------------------------------  191 (299)
T d1fgka_         181 --LARDIHHIDYY-------------------------------------------------------------------  191 (299)
T ss_dssp             --CCCCGGGCCTT-------------------------------------------------------------------
T ss_pred             --hhccccccccc-------------------------------------------------------------------
Confidence              33312111100                                                                   


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                        .......||+.|+|||++.+..++..+|+|
T Consensus       192 --------------------------------------------------~~~~~~~~~~~y~aPE~l~~~~y~~k~Diw  221 (299)
T d1fgka_         192 --------------------------------------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVW  221 (299)
T ss_dssp             --------------------------------------------------CCCTTSCCGGGGSCHHHHHHCCCCHHHHHH
T ss_pred             --------------------------------------------------cccccCCCChhhhhhhHhcCCCCCchhhhH
Confidence                                                              012344789999999999999999999999


Q ss_pred             CccchhhhhcC-CCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLG-PHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~-gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+|+++|||++ |+-         ||.. .+.......+..+..+..  +.++++.+.+||.+||+.||++|||++|+++
T Consensus       222 S~Gvvl~ell~~g~~---------p~~~-~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         222 SFGVLLWEIFTLGGS---------PYPG-VPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHHHHHHTTSCC---------SSTT-CCHHHHHHHHHTTCCCCC--CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhHHHHHHhccCCCC---------CCCC-CCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            99999999997 564         5544 666666666666655544  4568999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-40  Score=311.95  Aligned_cols=249  Identities=15%  Similarity=0.189  Sum_probs=205.3

Q ss_pred             CCcceEEEEEecCCC-----ceeEEEEeccccccC-cchHHHHHHHHHHHHhCCCCCcccccceeEeCCEEEEEEeccCC
Q psy9736           1 MKRGVTIDRFSSDDR-----RFFSKILSNPITLAQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWVVMEYLPG   74 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~-----~~~~~va~K~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   74 (400)
                      ||+|+|+.||++...     ....+||+|.++... ....+.+.+|+.++++++|+||+++++++..+...++||||+++
T Consensus        28 lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~  107 (308)
T d1p4oa_          28 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTR  107 (308)
T ss_dssp             EEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCC
Confidence            689999999998764     335789999886443 23345689999999999999999999999988999999999999


Q ss_pred             CChHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          75 GSLTDVVTET-----------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        75 ~~L~~~i~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      |+|.+++...           .+++..+..++.|++.||.|||+++|+||||||+||+++.++++||+|||  +++....
T Consensus       108 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFG--la~~~~~  185 (308)
T d1p4oa_         108 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYE  185 (308)
T ss_dssp             CBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT--CCCGGGG
T ss_pred             CCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecc--cceeccC
Confidence            9999988531           36888999999999999999999999999999999999999999999999  5542211


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      .....                                                                           
T Consensus       186 ~~~~~---------------------------------------------------------------------------  190 (308)
T d1p4oa_         186 TDYYR---------------------------------------------------------------------------  190 (308)
T ss_dssp             GGCEE---------------------------------------------------------------------------
T ss_pred             Cccee---------------------------------------------------------------------------
Confidence            11100                                                                           


Q ss_pred             ccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhh
Q psy9736         224 LWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEF  303 (400)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~  303 (400)
                                                                ......||+.|+|||.+.+..+...+|+||+|+++|||
T Consensus       191 ------------------------------------------~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El  228 (308)
T d1p4oa_         191 ------------------------------------------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  228 (308)
T ss_dssp             ------------------------------------------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------------------------------eccceecccccCCHHHHccCCCCcccccccHHHHHHHH
Confidence                                                      01223688999999999999888899999999999999


Q ss_pred             cCCCCcccccccccCcchhhcHHHHHHHHHhCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc------Cccc
Q psy9736         304 LGPHKWSFQPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK------HPFL  377 (400)
Q Consensus       304 ~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~------hp~~  377 (400)
                      ++|..         |+....+..+.+..+.++..+..  +..+++.+.+||.+||+.||++|||++++++      +|+|
T Consensus       229 ~t~~~---------~p~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~  297 (308)
T d1p4oa_         229 ATLAE---------QPYQGLSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF  297 (308)
T ss_dssp             HHTSC---------CTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred             HhCCC---------CCCCCCCHHHHHHHHHhCCCCCC--cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence            99854         44444788888888888766554  4458889999999999999999999999987      5666


Q ss_pred             cc
Q psy9736         378 KI  379 (400)
Q Consensus       378 ~~  379 (400)
                      ++
T Consensus       298 ~~  299 (308)
T d1p4oa_         298 RE  299 (308)
T ss_dssp             HH
T ss_pred             cC
Confidence            53

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=307.40  Aligned_cols=243  Identities=16%  Similarity=0.228  Sum_probs=197.8

Q ss_pred             CCcceEEEEEecC-----CCceeEEEEeccccccCc-chHHHHHHHHHHHHhC-CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSD-----DRRFFSKILSNPITLAQQ-PKKELIINEILVMREN-KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~-----~~~~~~~va~K~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      ||+|+|+.||+++     +......||+|.+..... .....+.+|+.+++++ +|+||+++++++.++...+++||||+
T Consensus        31 iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~  110 (311)
T d1t46a_          31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC  110 (311)
T ss_dssp             EEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             EeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCC
Confidence            6999999999984     456778899999875443 3456789999999998 69999999999999999999999999


Q ss_pred             CCChHHHHhhc-------------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          74 GGSLTDVVTET-------------------CMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        74 ~~~L~~~i~~~-------------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      +++|.+++...                   .+++..+..++.||+.|+.|||+++++||||||+||+++.++.++++|||
T Consensus       111 ~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG  190 (311)
T d1t46a_         111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG  190 (311)
T ss_dssp             TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCG
T ss_pred             CCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccc
Confidence            99999998632                   48899999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeee
Q psy9736         135 RFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNY  214 (400)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (400)
                        .++.........                                                                  
T Consensus       191 --~~~~~~~~~~~~------------------------------------------------------------------  202 (311)
T d1t46a_         191 --LARDIKNDSNYV------------------------------------------------------------------  202 (311)
T ss_dssp             --GGSCTTSCTTSE------------------------------------------------------------------
T ss_pred             --hheeccCCCcce------------------------------------------------------------------
Confidence              444221110000                                                                  


Q ss_pred             cccccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCC
Q psy9736         215 LDSYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPT  294 (400)
Q Consensus       215 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~  294 (400)
                                                                         ......||+.|+|||++.+..++..+|+|
T Consensus       203 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DIw  231 (311)
T d1t46a_         203 ---------------------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVW  231 (311)
T ss_dssp             ---------------------------------------------------ECSSSEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             ---------------------------------------------------EeeecccChHHcCHHHhcCCCCCCccccc
Confidence                                                               02234789999999999998888999999


Q ss_pred             CccchhhhhcCCCCcccccccccCcchhhcHHHHHHHHH-hCCCCCcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         295 GLTGSILEFLGPHKWSFQPHFLIPYLFILSCRQALYLIA-TNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       295 s~g~~~~~~~~gd~ws~g~~~~~P~~~~~~~~~~~~~i~-~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |+|+++|||+++..         |+....+....+..++ .+..+..  +..++..+.+||.+||+.||++|||++++++
T Consensus       232 S~G~~l~ellt~g~---------p~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         232 SYGIFLWELFSLGS---------SPYPGMPVDSKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHHHHHTTTC---------CSSTTCCSSHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHhCCC---------CCCCCCCHHHHHHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999998654         5555455545554444 4443333  3457899999999999999999999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-38  Score=295.31  Aligned_cols=254  Identities=16%  Similarity=0.237  Sum_probs=181.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccccceeEeCC----EEEEEEeccCCCC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNYLDSYLVGE----ELWVVMEYLPGGS   76 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~~~~~   76 (400)
                      ||+|+|+.||+++.  .+.+||+|.+..... .......|+..++.++|+||+++++++..++    ..|+||||+++|+
T Consensus        11 iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~   87 (303)
T d1vjya_          11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             EECCSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             EeeCCCeEEEEEEE--CCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCC
Confidence            69999999999874  467899998864432 2222334455556789999999999987643    6899999999999


Q ss_pred             hHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh--------CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchh
Q psy9736          77 LTDVVTETCMDEGQIAAVCREVLQALEFLHS--------NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKV  148 (400)
Q Consensus        77 L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~--------~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  148 (400)
                      |.+++.+..+++..+..++.|++.|+.|+|+        ++|+||||||+||+++.++.+||+|||  ++..........
T Consensus        88 L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG--l~~~~~~~~~~~  165 (303)
T d1vjya_          88 LFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG--LAVRHDSATDTI  165 (303)
T ss_dssp             HHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT--TCEEEETTTTEE
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC--ccccccCCCcce
Confidence            9999998889999999999999999999996        599999999999999999999999999  444221111000


Q ss_pred             hccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         149 IIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       149 ~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                                                                                      
T Consensus       166 --------------------------------------------------------------------------------  165 (303)
T d1vjya_         166 --------------------------------------------------------------------------------  165 (303)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCC------CCcccCCCCccchhhh
Q psy9736         229 PIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKN------KNQTTPPTGLTGSILE  302 (400)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~d~~s~g~~~~~  302 (400)
                                                         ........||+.|+|||++.+..      ++..+|+||+|+++||
T Consensus       166 -----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~e  210 (303)
T d1vjya_         166 -----------------------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  210 (303)
T ss_dssp             -----------------------------------CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHH
Confidence                                               00123347899999999887643      2246799999999999


Q ss_pred             hcCCCCc-ccccccccCcchh----hcHHHHHHHHHhC-CCCCcchh---hhhcHHHHHHHHHhhhhhhhhhhcHHHHhc
Q psy9736         303 FLGPHKW-SFQPHFLIPYLFI----LSCRQALYLIATN-KKPEIKEK---EKLSQIFQDFLDQCLEEEVETRASASLLLK  373 (400)
Q Consensus       303 ~~~gd~w-s~g~~~~~P~~~~----~~~~~~~~~i~~~-~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  373 (400)
                      |++|..+ ........|+...    .+.......+..+ ..|.++..   ......+.+|+.+||+.||++|||+.|+++
T Consensus       211 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            9999542 2222222333321    1222222222222 22333221   223456899999999999999999999976


Q ss_pred             C
Q psy9736         374 H  374 (400)
Q Consensus       374 h  374 (400)
                      +
T Consensus       291 ~  291 (303)
T d1vjya_         291 T  291 (303)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4e-37  Score=289.58  Aligned_cols=256  Identities=17%  Similarity=0.181  Sum_probs=189.7

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCcccc-cceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVNY-LDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~-~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+...+..||+|.+.....  .+++.+|+.+++.++|+|++.. ..++..+...++||||+ ++++..
T Consensus        15 iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~   91 (299)
T d1ckia_          15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   91 (299)
T ss_dssp             EEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhh
Confidence            6899999999999888888899998765433  2457899999999987765554 56667778999999999 556666


Q ss_pred             HHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC---CCceEEeccchhhhhhhccccchhhccccc
Q psy9736          80 VVT--ETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL---DGSVKLSKWNRFIATKLYIEISKVIIYCWD  154 (400)
Q Consensus        80 ~i~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  154 (400)
                      .+.  .+.+++..+..++.|++.||.|||+++|+||||||+||+++.   +..++++|||  ++..+.......      
T Consensus        92 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG--~a~~~~~~~~~~------  163 (299)
T d1ckia_          92 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG--LAKKYRDARTHQ------  163 (299)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCS--SCEECBCTTTCC------
T ss_pred             hhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccC--cceecccccccc------
Confidence            654  347999999999999999999999999999999999999864   4579999999  554222111110      


Q ss_pred             cccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCCCC
Q psy9736         155 WTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEEPS  234 (400)
Q Consensus       155 ~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  234 (400)
                                                                                         .            
T Consensus       164 -------------------------------------------------------------------~------------  164 (299)
T d1ckia_         164 -------------------------------------------------------------------H------------  164 (299)
T ss_dssp             -------------------------------------------------------------------B------------
T ss_pred             -------------------------------------------------------------------c------------
Confidence                                                                               0            


Q ss_pred             CccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccccc
Q psy9736         235 NTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQPH  314 (400)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g~~  314 (400)
                                                 .......+..||+.|+|||++.+..++..+|.||+|+++|||++|..      
T Consensus       165 ---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~------  211 (299)
T d1ckia_         165 ---------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL------  211 (299)
T ss_dssp             ---------------------------CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSC------
T ss_pred             ---------------------------eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCC------
Confidence                                       00011345689999999999999989999999999999999999987      


Q ss_pred             cccCcchhhcHHHHHH---HHHhC-CCCCcc-hhhhhcHHHHHHHHHhhhhhhhhhhcHH---HHhcCccccccCCC
Q psy9736         315 FLIPYLFILSCRQALY---LIATN-KKPEIK-EKEKLSQIFQDFLDQCLEEEVETRASAS---LLLKHPFLKIARPL  383 (400)
Q Consensus       315 ~~~P~~~~~~~~~~~~---~i~~~-~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~s~~---~~l~hp~~~~~~~~  383 (400)
                         ||... .......   +.... .....+ ...++++.+.+||..||+.||++||+++   ++|+|+|.+.....
T Consensus       212 ---P~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~~~  284 (299)
T d1ckia_         212 ---PWQGL-KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY  284 (299)
T ss_dssp             ---TTCCC-C-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCCC
T ss_pred             ---ccccc-chHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCCCC
Confidence               88652 2221111   11111 001111 1235788999999999999999999987   55888887654443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.4e-35  Score=278.29  Aligned_cols=246  Identities=15%  Similarity=0.174  Sum_probs=192.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCC-CCcccccceeEeCCEEEEEEeccCCCChHH
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKH-PNIVNYLDSYLVGEELWVVMEYLPGGSLTD   79 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   79 (400)
                      ||+|+|+.||++.+...+..||+|.+....  ..+.+.+|+.+++.+.| +|++.+++++..+...++||||+ +++|.+
T Consensus        13 iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~   89 (293)
T d1csna_          13 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLED   89 (293)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHH
Confidence            689999999999988888899999875433  23447789999999965 89999999999999999999999 779988


Q ss_pred             HHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecC-----CCceEEeccchhhhhhhccccchhhccc
Q psy9736          80 VVTE--TCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGL-----DGSVKLSKWNRFIATKLYIEISKVIIYC  152 (400)
Q Consensus        80 ~i~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~-----~~~~~l~dfg~~~~~~~~~~~~~~~~~~  152 (400)
                      ++..  ..++...+..++.|++.||.|||+.||+||||||+||+++.     .+.++|+|||  ++...........   
T Consensus        90 ~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG--~a~~~~~~~~~~~---  164 (293)
T d1csna_          90 LLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG--MVKFYRDPVTKQH---  164 (293)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT--TCEESBCTTTCCB---
T ss_pred             HHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccc--eeEEcccCccccc---
Confidence            8864  36999999999999999999999999999999999999975     5789999999  5553322221110   


Q ss_pred             cccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCCCCC
Q psy9736         153 WDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKPIEE  232 (400)
Q Consensus       153 ~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  232 (400)
                                                                                                      
T Consensus       165 --------------------------------------------------------------------------------  164 (293)
T d1csna_         165 --------------------------------------------------------------------------------  164 (293)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCccchhhhhcCCCCcccc
Q psy9736         233 PSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGLTGSILEFLGPHKWSFQ  312 (400)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~g~~~~~~~~gd~ws~g  312 (400)
                                                   ..........||+.|||||++.+..++..+|.||+|+++|||++|..    
T Consensus       165 -----------------------------~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~----  211 (293)
T d1csna_         165 -----------------------------IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL----  211 (293)
T ss_dssp             -----------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC----
T ss_pred             -----------------------------eeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCC----
Confidence                                         00012345689999999999999988899999999999999999987    


Q ss_pred             cccccCcchh--hcHHHHHHHHHhCCC-CCcch-hhhhcHHHHHHHHHhhhhhhhhhhcHHHHh
Q psy9736         313 PHFLIPYLFI--LSCRQALYLIATNKK-PEIKE-KEKLSQIFQDFLDQCLEEEVETRASASLLL  372 (400)
Q Consensus       313 ~~~~~P~~~~--~~~~~~~~~i~~~~~-~~~~~-~~~~s~~~~dli~~~L~~dP~~R~s~~~~l  372 (400)
                           ||...  .+.......+..... ...+. ..++++.+.+++..|+..+|++||+.+.+.
T Consensus       212 -----Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         212 -----PWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             -----TTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             -----cCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence                 88642  233333333322211 11111 134778899999999999999999877654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-35  Score=286.96  Aligned_cols=248  Identities=17%  Similarity=0.177  Sum_probs=181.6

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC-----------CCCcccccceeEeC--CEEEE
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK-----------HPNIVNYLDSYLVG--EELWV   67 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~~~~~~~~~--~~~~l   67 (400)
                      ||+|+|++||++++..+...||+|+++... ...+.+.+|+.+++.+.           |+||+++++++...  ...++
T Consensus        21 LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~   99 (362)
T d1q8ya_          21 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV   99 (362)
T ss_dssp             EEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceee
Confidence            699999999999999999999999986443 23466789999998875           57899999887643  46666


Q ss_pred             EEeccCCCCh-HHHHh---hcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCCCceEecCCCc------eEEeccchh
Q psy9736          68 VMEYLPGGSL-TDVVT---ETCMDEGQIAAVCREVLQALEFLHS-NQVIHRDIKSDNILLGLDGS------VKLSKWNRF  136 (400)
Q Consensus        68 v~e~~~~~~L-~~~i~---~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~nil~~~~~~------~~l~dfg~~  136 (400)
                      ++.++..+.. .....   ...+++..++.++.|++.|+.|||+ .||+||||||+||+++..+.      ++++|||  
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg--  177 (362)
T d1q8ya_         100 VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG--  177 (362)
T ss_dssp             EEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCT--
T ss_pred             eeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecc--
Confidence            6666644433 22222   2368999999999999999999998 79999999999999987653      8999999  


Q ss_pred             hhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecc
Q psy9736         137 IATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLD  216 (400)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (400)
                      .+....    .                                                                     
T Consensus       178 ~s~~~~----~---------------------------------------------------------------------  184 (362)
T d1q8ya_         178 NACWYD----E---------------------------------------------------------------------  184 (362)
T ss_dssp             TCEETT----B---------------------------------------------------------------------
T ss_pred             cccccc----c---------------------------------------------------------------------
Confidence            332110    0                                                                     


Q ss_pred             cccccccccccCCCCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCccCCCcceecCCCCcccCCCCc
Q psy9736         217 SYLVGEELWYTKPIEEPSNTTDEKTSTSSASPLSTPPLSLIQPPPPSTPPRSTLNGALTSLPPPVVLDKNKNQTTPPTGL  296 (400)
Q Consensus       217 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~d~~s~  296 (400)
                                                                       ......||+.|+|||++....++..+|+||+
T Consensus       185 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  215 (362)
T d1q8ya_         185 -------------------------------------------------HYTNSIQTREYRSPEVLLGAPWGCGADIWST  215 (362)
T ss_dssp             -------------------------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHH
T ss_pred             -------------------------------------------------ccccccccccccChhhccccCCCccccccch
Confidence                                                             0223468899999999998888889999999


Q ss_pred             cchhhhhcCCCCcccccccccCcchhhc-----HHHHHH---HHHhCCC-----------------------C-------
Q psy9736         297 TGSILEFLGPHKWSFQPHFLIPYLFILS-----CRQALY---LIATNKK-----------------------P-------  338 (400)
Q Consensus       297 g~~~~~~~~gd~ws~g~~~~~P~~~~~~-----~~~~~~---~i~~~~~-----------------------~-------  338 (400)
                      |+++++|++|..         ||.....     ....+.   .++...+                       .       
T Consensus       216 G~il~el~~g~~---------pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (362)
T d1q8ya_         216 ACLIFELITGDF---------LFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL  286 (362)
T ss_dssp             HHHHHHHHHSSC---------CC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCH
T ss_pred             HHHHHHHHHCCC---------CCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCch
Confidence            999999999976         6654211     011111   1110000                       0       


Q ss_pred             ------CcchhhhhcHHHHHHHHHhhhhhhhhhhcHHHHhcCccccccCC
Q psy9736         339 ------EIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP  382 (400)
Q Consensus       339 ------~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~~~l~hp~~~~~~~  382 (400)
                            ........++.+.|||++||++||.+|||++|+|+||||++...
T Consensus       287 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~  336 (362)
T d1q8ya_         287 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  336 (362)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             hhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCC
Confidence                  00012346778999999999999999999999999999996543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.72  E-value=2.3e-18  Score=149.76  Aligned_cols=122  Identities=14%  Similarity=0.145  Sum_probs=94.0

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCc------------------chHHHHHHHHHHHHhCCCCCcccccceeEeC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQ------------------PKKELIINEILVMRENKHPNIVNYLDSYLVG   62 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~------------------~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~   62 (400)
                      ||+|+|+.||.+.+. .+..||+|.......                  .......+|..++.++.|.+++..+++..  
T Consensus         8 IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~~--   84 (191)
T d1zara2           8 MGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG--   84 (191)
T ss_dssp             EEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEET--
T ss_pred             eeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEecC--
Confidence            689999999998764 356788886542210                  01233457888999999999988775432  


Q ss_pred             CEEEEEEeccCCCChHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCCCceEecCCCceEEeccc
Q psy9736          63 EELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHSNQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus        63 ~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                        .+++|||+++..+.+      ++...+..++.|++.++.|||++||+||||||+||+++.++ ++++|||
T Consensus        85 --~~lvme~~~~~~~~~------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG  147 (191)
T d1zara2          85 --NAVLMELIDAKELYR------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFP  147 (191)
T ss_dssp             --TEEEEECCCCEEGGG------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCT
T ss_pred             --CEEEEEeeccccccc------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECC
Confidence              278999998765533      34455678999999999999999999999999999998655 8899999

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.47  E-value=0.00023  Score=62.28  Aligned_cols=47  Identities=11%  Similarity=-0.168  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCChHHHH
Q psy9736          35 ELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSLTDVV   81 (400)
Q Consensus        35 ~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~i   81 (400)
                      ..+.+|...++.+. +--+.+++.+...++..++||++++|.++....
T Consensus        54 ~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             hhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccc
Confidence            34678888888774 334567777778888999999999887775443

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=5.2e-05  Score=67.63  Aligned_cols=86  Identities=17%  Similarity=0.224  Sum_probs=57.6

Q ss_pred             HHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCC
Q psy9736         100 QALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEP  175 (400)
Q Consensus       100 ~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~  175 (400)
                      ......|.    .+|.-.  .-.++-+.+-|..+..+.+      .......         ...||..|+|||.+.+.. 
T Consensus       120 H~~~IiHrDiKp~NILl~--~~~~~KL~DFG~a~~~~~~------~~~~~~~---------~~~GT~~Y~APE~~~~~~-  181 (271)
T d1nvra_         120 HGIGITHRDIKPENLLLD--ERDNLKISDFGLATVFRYN------NRERLLN---------KMCGTLPYVAPELLKRRE-  181 (271)
T ss_dssp             HHTTEECSCCCGGGEEEC--TTCCEEECCCTTCEECEET------TEECCBC---------CCCSCGGGSCTHHHHCSS-
T ss_pred             HHcCCccCcccHHHEEEC--CCCCEEEccchhheeeccC------Ccccccc---------ceeeCcCccCHhHhcCCC-
Confidence            44455663    245421  1246777777877765443      1111111         136889999999998876 


Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                                               .+....|+||+|++++++++|..+|...
T Consensus       182 -------------------------~~~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         182 -------------------------FHAEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             -------------------------BCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             -------------------------CCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence                                     3456789999999999999999998653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=2.7e-05  Score=70.58  Aligned_cols=86  Identities=12%  Similarity=0.091  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc-cCCCCCCC--------------------Cc
Q psy9736         178 ELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY-TKPIEEPS--------------------NT  236 (400)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~--------------------~~  236 (400)
                      +...+|+..++.++|||+|.+++.+...+.+|-+++.+........... ....++.+                    ..
T Consensus        72 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiH  151 (299)
T d1jpaa_          72 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH  151 (299)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence            3568999999999999999999999888888888877754332221111 11222222                    33


Q ss_pred             ccccccc---CCCCCCCCCCCCCCCCCCCC
Q psy9736         237 TDEKTST---SSASPLSTPPLSLIQPPPPS  263 (400)
Q Consensus       237 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~  263 (400)
                      +|+++.+   +..+.+|.+|||.+......
T Consensus       152 rDlKp~NILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         152 RDLAARNILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             SCCCGGGEEECTTCCEEECCC---------
T ss_pred             CccccceEEECCCCcEEECCcccceEccCC
Confidence            6777776   57789999999988655543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=8.5e-05  Score=67.86  Aligned_cols=43  Identities=21%  Similarity=0.271  Sum_probs=37.9

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.|..                           |....|+||+|++++++++|..+|...
T Consensus       164 ~GT~~Y~APEvl~~~~---------------------------y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         164 VGTRSYMSPERLQGTH---------------------------YSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             CCSSCCCCHHHHHCSC---------------------------CCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             cCCccccCchHHcCCC---------------------------CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            4788999999998865                           678899999999999999999998753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=7.8e-05  Score=66.11  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=37.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           |....|+||+|++++++++|..+|..
T Consensus       165 ~Gt~~Y~APE~~~~~~---------------------------~~~~~DiwSlGvilyell~G~~Pf~~  206 (263)
T d2j4za1         165 CGTLDYLPPEMIEGRM---------------------------HDEKVDLWSLGVLCYEFLVGKPPFEA  206 (263)
T ss_dssp             TEEGGGCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             CCCCcccCHHHHcCCC---------------------------CCchhhhhhHhHHHHHHhcCCCCCCC
Confidence            4788999999999865                           56788999999999999999999865

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=7.1e-05  Score=67.34  Aligned_cols=85  Identities=13%  Similarity=0.166  Sum_probs=55.0

Q ss_pred             HHHHHHHHhC----CeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHSN----QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~~----~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.-    +|.-.  ...++-+.+-|..+..+..  ..    .....         ...||..|+|||.+.+..
T Consensus       124 lH~~~iiHrDiKp~NIll~--~~~~vkl~DFG~a~~~~~~--~~----~~~~~---------~~~GT~~Y~APE~~~~~~  186 (288)
T d1uu3a_         124 LHGKGIIHRDLKPENILLN--EDMHIQITDFGTAKVLSPE--SK----QARAN---------SFVGTAQYVSPELLTEKS  186 (288)
T ss_dssp             HHHTTEECSCCSGGGEEEC--TTSCEEECCCTTCEECC-------------------------CCCCGGGCCHHHHHTCC
T ss_pred             hccccEEcCcCCccccccC--CCceEEecccccceecccC--Cc----ccccc---------cccCCccccCceeeccCC
Confidence            4445556732    44321  1235677777877765433  11    11111         135789999999998865


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                 |....|+||+|++++++++|..+|..
T Consensus       187 ---------------------------~~~~~DiwSlGvilyell~g~~Pf~~  212 (288)
T d1uu3a_         187 ---------------------------ACKSSDLWALGCIIYQLVAGLPPFRA  212 (288)
T ss_dssp             ---------------------------CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------------------CCcccceehhhHHHHHHhhCCCCCCC
Confidence                                       56778999999999999999999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.47  E-value=0.0037  Score=53.92  Aligned_cols=42  Identities=17%  Similarity=0.204  Sum_probs=30.8

Q ss_pred             HHHHHHHHHHhCCC--CCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736          36 LIINEILVMRENKH--PNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus        36 ~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      .+..|...++.+..  -.+.+++.+...++..+++|++++|.++
T Consensus        50 ~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          50 ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            36678888877633  3356667777777888999999987665

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00014  Score=65.64  Aligned_cols=42  Identities=17%  Similarity=0.215  Sum_probs=37.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           |....|+||+|++++++++|..+|..
T Consensus       176 ~gT~~Y~APE~~~~~~---------------------------y~~~~DiwSlG~il~ell~g~~pf~~  217 (305)
T d1blxa_         176 VVTLWYRAPEVLLQSS---------------------------YATPVDLWSVGCIFAEMFRRKPLFRG  217 (305)
T ss_dssp             CCCCTTCCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccChhhcCcchhcCCC---------------------------CChhehhhchHHHHHHHHHCCCCCCC
Confidence            4788999999998865                           66789999999999999999999865

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.43  E-value=0.00012  Score=65.58  Aligned_cols=86  Identities=17%  Similarity=0.188  Sum_probs=59.5

Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc--CCCCCCC-------------------
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT--KPIEEPS-------------------  234 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~-------------------  234 (400)
                      ..+...+|+..++.++|||+|.+.+.+..++.+|-+++.+...-........  ...++..                   
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          56 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456789999999999999999999999888888888777543222211111  1112111                   


Q ss_pred             -Ccccccccc---CCCCCCCCCCCCCCCCCC
Q psy9736         235 -NTTDEKTST---SSASPLSTPPLSLIQPPP  261 (400)
Q Consensus       235 -~~~~~~~~~---~~~~~~~~~~~~~~~~~~  261 (400)
                       ..+|.++.+   +..+.+|.+|||.+....
T Consensus       136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~  166 (287)
T d1opja_         136 FIHRDLAARNCLVGENHLVKVADFGLSRLMT  166 (287)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred             cccCccccCeEEECCCCcEEEccccceeecC
Confidence             346778776   566899999999875433

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00018  Score=66.03  Aligned_cols=44  Identities=16%  Similarity=0.277  Sum_probs=38.6

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      ..||..|+|||.+.+..                           |....|+|++|++++++++|.++|...
T Consensus       165 ~~GT~~Y~aPE~~~~~~---------------------------y~~~~DiwSlGvilyeml~G~~pf~~~  208 (337)
T d1o6la_         165 FCGTPEYLAPEVLEDND---------------------------YGRAVDWWGLGVVMYEMMCGRLPFYNQ  208 (337)
T ss_dssp             CEECGGGCCGGGGSSSC---------------------------BCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ceeCHHHhhhhhccCCC---------------------------CChhhcccchhhHHHHHHHCCCCCCCc
Confidence            35789999999998875                           678899999999999999999888653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.40  E-value=0.00019  Score=66.73  Aligned_cols=45  Identities=16%  Similarity=0.101  Sum_probs=38.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      .||..|+|||.+.+..                          .|....|+|++|++++++++|..+|....
T Consensus       166 ~GT~~y~APE~~~~~~--------------------------~~~~~~DiwSlGvilyemltG~~Pf~~~~  210 (364)
T d1omwa3         166 VGTHGYMAPEVLQKGV--------------------------AYDSSADWFSLGCMLFKLLRGHSPFRQHK  210 (364)
T ss_dssp             CSCGGGCCHHHHSTTC--------------------------CCCTHHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             ccccccchhHHhhcCC--------------------------CCCcccchhHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999987654                          46778899999999999999999997643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00015  Score=64.43  Aligned_cols=42  Identities=14%  Similarity=0.192  Sum_probs=35.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           |....|+|++|++++++++|..+|..
T Consensus       175 ~gt~~Y~APE~l~~~~---------------------------~~~~~DIwSlGvilyel~tg~~Pf~~  216 (269)
T d2java1         175 VGTPYYMSPEQMNRMS---------------------------YNEKSDIWSLGCLLYELCALMPPFTA  216 (269)
T ss_dssp             -CCCSCCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCcccCCHHHHcCCC---------------------------CChHHHHHhhCHHHHHHhhCCCCCCC
Confidence            4678899999997764                           56778999999999999999998865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.39  E-value=0.00013  Score=65.06  Aligned_cols=43  Identities=19%  Similarity=0.212  Sum_probs=33.8

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|++++++++|..+|..
T Consensus       174 ~~Gt~~Y~aPE~~~~~~---------------------------~~~~~DiwSlGvilyelltG~~Pf~~  216 (277)
T d1o6ya_         174 VIGTAQYLSPEQARGDS---------------------------VDARSDVYSLGCVLYEVLTGEPPFTG  216 (277)
T ss_dssp             -----TTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCcccccCHHHHcCCC---------------------------CCcceecccchHHHHHHHhCCCCCCC
Confidence            46789999999998865                           55678999999999999999999865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.00018  Score=64.67  Aligned_cols=171  Identities=8%  Similarity=0.049  Sum_probs=92.5

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC----------CCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENK----------HPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~----------h~niv~~~~~~~~~~~~~lv~   69 (400)
                      +|.|.++.+.. .++..+|.|++.+.-....+.-.+++ +-+..++.-+          ..++.-+.+++.. +.+   .
T Consensus        31 G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~-~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g-g~L---~  105 (293)
T d1yhwa1          31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI-LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG-GSL---T  105 (293)
T ss_dssp             SSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHH-HHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT-CBH---H
T ss_pred             CcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHH-HHHHhCCCCCEeeEeEEEEECCEEEEEEEecCC-CcH---H
Confidence            68898888864 67888999988765443332222222 1233333311          1222222333332 221   2


Q ss_pred             eccCCCChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHhC----CeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          70 EYLPGGSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHSN----QVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        70 e~~~~~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~~----~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      ++...+.+......     .-...++..  .+.....+|.-    +|.-.  .-.++.+.+-|..+..+-+      ...
T Consensus       106 ~~~~~~~l~~~~~~-----~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~--~~~~vkl~DFG~a~~~~~~------~~~  172 (293)
T d1yhwa1         106 DVVTETCMDEGQIA-----AVCRECLQALEFLHSNQVIHRDIKSDNILLG--MDGSVKLTDFGFCAQITPE------QSK  172 (293)
T ss_dssp             HHHHHSCCCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--TTCCEEECCCTTCEECCST------TCC
T ss_pred             HHhhccCCCHHHHH-----HHHHHHHHHHHHHHHCCCcccCCcHHHeEEC--CCCcEeeccchhheeeccc------ccc
Confidence            23322233221111     122333322  24445567742    44421  1246777777776644322      111


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                      ...           ..||..|+|||.+.+..                           |....|+|++|++++++++|..
T Consensus       173 ~~~-----------~~gt~~Y~aPE~~~~~~---------------------------~~~~~DiwSlGvilyemltG~~  214 (293)
T d1yhwa1         173 RST-----------MVGTPYWMAPEVVTRKA---------------------------YGPKVDIWSLGIMAIEMIEGEP  214 (293)
T ss_dssp             BCC-----------CCSCGGGCCHHHHSSSC---------------------------BCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccc-----------cccCCCccChhhhcCCC---------------------------CCchhceehHhHHHHHHhhCCC
Confidence            111           24788999999998865                           5678899999999999999999


Q ss_pred             cccc
Q psy9736         224 LWYT  227 (400)
Q Consensus       224 ~~~~  227 (400)
                      +|..
T Consensus       215 Pf~~  218 (293)
T d1yhwa1         215 PYLN  218 (293)
T ss_dssp             TTTT
T ss_pred             CCCC
Confidence            9864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.33  E-value=0.00014  Score=65.85  Aligned_cols=173  Identities=14%  Similarity=0.130  Sum_probs=81.7

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcc--hHH-HHHHHHH---HHHh---C-CCCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQP--KKE-LIINEIL---VMRE---N-KHPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~--~~~-~~~~Ei~---~l~~---l-~h~niv~~~~~~~~~~~~~lv~   69 (400)
                      +|.|.++.+.. .++..+|.|++.|........  ..| .+...+.   +++-   . ...++.-+.+++.. +.   +.
T Consensus        20 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~g-g~---L~   95 (307)
T d1a06a_          20 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG-GE---LF   95 (307)
T ss_dssp             GGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS-CB---HH
T ss_pred             ccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC-Cc---HH
Confidence            57898888765 567888999987765433222  222 2333332   1111   1 12222222333332 21   12


Q ss_pred             ecc-CCCChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHh----CCeecCCC-CCCceEecCCCceEEeccchhhhhhh
Q psy9736          70 EYL-PGGSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHS----NQVIHRDI-KSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        70 e~~-~~~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~----~~ivH~di-kp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +++ ..+.+......     ..+..++..  .+......|.    .+|.-... .-.++.+.+-|..+..+-+  ...  
T Consensus        96 ~~l~~~~~l~e~~~~-----~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~--~~~--  166 (307)
T d1a06a_          96 DRIVEKGFYTERDAS-----RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVL--  166 (307)
T ss_dssp             HHHHTCSCCCHHHHH-----HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----------------
T ss_pred             HhhhcccCCCHHHHH-----HHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC--Cee--
Confidence            222 22233221111     112222222  2344455663    25543322 2345777777777665544  111  


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                        .            ...||..|+|||.+.+..                           |....|+|++|++++++++|
T Consensus       167 --~------------~~~GT~~y~APE~~~~~~---------------------------~~~~~DiwSlGvilyell~g  205 (307)
T d1a06a_         167 --S------------TACGTPGYVAPEVLAQKP---------------------------YSKAVDCWSIGVIAYILLCG  205 (307)
T ss_dssp             --------------------CTTSCHHHHTTCC---------------------------CCTHHHHHHHHHHHHHHHHS
T ss_pred             --e------------eeeeCccccCcHHHcCCC---------------------------CCcHHHhhhhhHHHHHHHhC
Confidence              0            124788999999998865                           56789999999999999999


Q ss_pred             cccccc
Q psy9736         222 EELWYT  227 (400)
Q Consensus       222 ~~~~~~  227 (400)
                      ..+|..
T Consensus       206 ~~Pf~~  211 (307)
T d1a06a_         206 YPPFYD  211 (307)
T ss_dssp             SCSCCC
T ss_pred             CCCCCC
Confidence            999865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00022  Score=63.30  Aligned_cols=41  Identities=10%  Similarity=0.026  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+                            .+....|+|++|++++++++|..+|..
T Consensus       174 ~GT~~Y~aPE~~~~----------------------------~~~~~~DIwSlGvilyel~~g~~Pf~~  214 (270)
T d1t4ha_         174 IGTPEFMAPEMYEE----------------------------KYDESVDVYAFGMCMLEMATSEYPYSE  214 (270)
T ss_dssp             CSSCCCCCGGGGGT----------------------------CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCccccCHHHhCC----------------------------CCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence            47889999999865                            356788999999999999999998864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.00014  Score=64.68  Aligned_cols=83  Identities=18%  Similarity=0.147  Sum_probs=56.0

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +......|.    .+|.- +-+...+.+.+-|..+..+-.  ...                 ...||..|+|||.+.+..
T Consensus       126 lH~~~iiHrDiKp~NIll-~~~~~~vkl~DFG~a~~~~~~--~~~-----------------~~~GT~~y~aPE~~~~~~  185 (273)
T d1xwsa_         126 CHNCGVLHRDIKDENILI-DLNRGELKLIDFGSGALLKDT--VYT-----------------DFDGTRVYSPPEWIRYHR  185 (273)
T ss_dssp             HHHTTEECSCCSGGGEEE-ETTTTEEEECCCTTCEECCSS--CBC-----------------CCCSCGGGSCHHHHHHSC
T ss_pred             HHHCCCccccCcccceEE-ecCCCeEEECccccceecccc--ccc-----------------ccccCCCcCCHHHHcCCC
Confidence            344455663    24442 222345667777777665543  111                 135789999999988766


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                .+....|+|++|++++++++|..+|..
T Consensus       186 --------------------------~~~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         186 --------------------------YHGRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             --------------------------BCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             --------------------------CCCcccccccceeeehhHhhCCCCCCC
Confidence                                      445678999999999999999988854

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.00024  Score=63.27  Aligned_cols=45  Identities=11%  Similarity=0.172  Sum_probs=37.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+....                        .|....|+||+|+++.|+++|..+|..
T Consensus       167 ~gt~~y~APE~l~~~~~~------------------------~~~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         167 SGSILWMAPEVIRMQDKN------------------------PYSFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             CCCGGGCCHHHHTTCSSC------------------------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCcccCCHHHHhcccCC------------------------CCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence            578889999999875421                        466788999999999999999998865

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.19  E-value=0.00027  Score=63.40  Aligned_cols=182  Identities=12%  Similarity=0.122  Sum_probs=102.3

Q ss_pred             CCcceEEEEEec-CCCceeEEEEeccccccCcchHHHHHHHHHHHHh-CCCCCcccccceeEe--------CCEEEEEEe
Q psy9736           1 MKRGVTIDRFSS-DDRRFFSKILSNPITLAQQPKKELIINEILVMRE-NKHPNIVNYLDSYLV--------GEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~--------~~~~~lv~e   70 (400)
                      +|.|.++.+... +++.+|.|+.-+..... ....  ..+++..++. -.++++..+...-..        ++...-...
T Consensus        16 G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-~~~~--e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~   92 (293)
T d1csna_          16 GSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-QLRD--EYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD   92 (293)
T ss_dssp             CSSCEEEEEEETTTTEEEEEEEEECCTTSC-CHHH--HHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHH
T ss_pred             CCCeEEEEEEECCCCCEEEEEEEccccCcH-HHHH--HHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHH
Confidence            688988888754 67788999876665444 3222  2467777765 666666544321110        111110111


Q ss_pred             ccCCCChHHHHhhcCCCHHHHHHHH--HHHHHHHHHHHh----CCeecC---CCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          71 YLPGGSLTDVVTETCMDEGQIAAVC--REVLQALEFLHS----NQVIHR---DIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        71 ~~~~~~L~~~i~~~~l~~~~~~~i~--~qi~~~l~~lH~----~~ivH~---dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      .. +..+.....     ......++  .+.+.....+|.    .+|.-.   .....++.+.+-|..+...-+  .....
T Consensus        93 ~~-~~~~~~~~~-----~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~--~~~~~  164 (293)
T d1csna_          93 LC-GRKFSVKTV-----AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP--VTKQH  164 (293)
T ss_dssp             HT-TTCCCHHHH-----HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT--TTCCB
T ss_pred             hh-ccchhhHHH-----HHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccC--ccccc
Confidence            11 212211111     01122222  223445566773    255432   123456788888877765433  11111


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      . ...       ......||..|+|||.+.++.                           +....|+||+|+++.++++|
T Consensus       165 ~-~~~-------~~~~~~GT~~y~aPE~~~~~~---------------------------~~~~~DiwSlG~~l~elltg  209 (293)
T d1csna_         165 I-PYR-------EKKNLSGTARYMSINTHLGRE---------------------------QSRRDDLEALGHVFMYFLRG  209 (293)
T ss_dssp             C-CCC-------CCCCCCSCTTTCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHHS
T ss_pred             e-eec-------ccCceEEchhhcCHHHhcCCC---------------------------CChHHHHHHhhHHHHHHHhC
Confidence            1 111       123467999999999999875                           56778999999999999999


Q ss_pred             ccccccC
Q psy9736         222 EELWYTK  228 (400)
Q Consensus       222 ~~~~~~~  228 (400)
                      ..+|...
T Consensus       210 ~~Pf~~~  216 (293)
T d1csna_         210 SLPWQGL  216 (293)
T ss_dssp             SCTTSSC
T ss_pred             CCcCCCc
Confidence            9999753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.11  E-value=0.0081  Score=55.74  Aligned_cols=74  Identities=15%  Similarity=-0.003  Sum_probs=40.4

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccc-----cC--cchHHHHHHHHHHHHhCC-C--CCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITL-----AQ--QPKKELIINEILVMRENK-H--PNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~-----~~--~~~~~~~~~Ei~~l~~l~-h--~niv~~~~~~~~~~~~~lv~e   70 (400)
                      +|-|..-.+|+.++......+++|....     ..  .....+...|...|+.+. +  ..+.+++.+  +....+++||
T Consensus        34 ig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE  111 (392)
T d2pula1          34 IGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVME  111 (392)
T ss_dssp             CCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEEC
T ss_pred             eCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEEEe
Confidence            4667777777776665556677764321     11  112234567888887662 2  234445433  3445678999


Q ss_pred             ccCCCC
Q psy9736          71 YLPGGS   76 (400)
Q Consensus        71 ~~~~~~   76 (400)
                      ++.+..
T Consensus       112 ~L~~~~  117 (392)
T d2pula1         112 DLSHLK  117 (392)
T ss_dssp             CCTTSE
T ss_pred             ccCCcc
Confidence            997644

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.00029  Score=64.15  Aligned_cols=42  Identities=21%  Similarity=0.302  Sum_probs=37.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           |....|+|++|++++++++|..+|.+
T Consensus       164 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwSlGvilyemltG~~PF~~  205 (320)
T d1xjda_         164 CGTPDYIAPEILLGQK---------------------------YNHSVDWWSFGVLLYEMLIGQSPFHG  205 (320)
T ss_dssp             CSCGGGCCHHHHTTCC---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCcCCHHHHcCCC---------------------------CCchhhhhhhhHHHHHHHhCCCCCCC
Confidence            4788999999999875                           66789999999999999999999875

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.00027  Score=64.78  Aligned_cols=170  Identities=14%  Similarity=0.173  Sum_probs=92.3

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHHHHHHHHHHHHhCCCCCccc--------------ccceeEeCCEE
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKELIINEILVMRENKHPNIVN--------------YLDSYLVGEEL   65 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~--------------~~~~~~~~~~~   65 (400)
                      ++.|.++.+.. .+++.+|.|++-+.-....+     +......+..-+--.+..              +.+++. ++.+
T Consensus        23 G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E-----~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~-gg~L   96 (335)
T d2ozaa1          23 GINGKVLQIFNKRTQEKFALKMLQDCPKARRE-----VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD-GGEL   96 (335)
T ss_dssp             CSSCEEEEEEETTTCCEEEEEEEECSHHHHHH-----HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC-SEEH
T ss_pred             ccCeEEEEEEECCCCCEEEEEEECCcHHHHHH-----HHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC-CCcH
Confidence            68898888865 67888899998776654322     222233343322211211              122222 2211


Q ss_pred             EEEEeccC---CCChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHh----CCeecCCCC-CCceEecCCCceEEeccch
Q psy9736          66 WVVMEYLP---GGSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHS----NQVIHRDIK-SDNILLGLDGSVKLSKWNR  135 (400)
Q Consensus        66 ~lv~e~~~---~~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~----~~ivH~dik-p~nil~~~~~~~~l~dfg~  135 (400)
                         .+++.   +..+......     .-+..++..  .+.....+|.    .+|.-.+-. ...+-+..-|..+...-+ 
T Consensus        97 ---~~~i~~~~~~~l~e~~~~-----~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~-  167 (335)
T d2ozaa1          97 ---FSRIQDRGDQAFTEREAS-----EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-  167 (335)
T ss_dssp             ---HHHHHSCSCCCEEHHHHH-----HHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC-
T ss_pred             ---HHHHHhcCCCCcCHHHHH-----HHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCC-
Confidence               23321   1123221111     112222222  2344555673    255543322 234566666766544322 


Q ss_pred             hhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeec
Q psy9736         136 FIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYL  215 (400)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (400)
                       -..     .           ...||..|+|||.+.+..                           |....|+|++|+++
T Consensus       168 -~~~-----~-----------~~~gt~~y~aPE~~~~~~---------------------------y~~~~DiwSlGvil  203 (335)
T d2ozaa1         168 -NSL-----T-----------TPCYTPYYVAPEVLGPEK---------------------------YDKSCDMWSLGVIM  203 (335)
T ss_dssp             -CCC-----C-----------CCSCCCSSCCCCCCCGGG---------------------------GSHHHHHHHHHHHH
T ss_pred             -Ccc-----c-----------cccCCcccCCcHHHcCCC---------------------------CCHHHHHHhhchhH
Confidence             111     1           124788999999987753                           67789999999999


Q ss_pred             ccccccccccccCC
Q psy9736         216 DSYLVGEELWYTKP  229 (400)
Q Consensus       216 ~~~l~~~~~~~~~~  229 (400)
                      +++++|..+|.+..
T Consensus       204 y~lltg~~Pf~~~~  217 (335)
T d2ozaa1         204 YILLCGYPPFYSNH  217 (335)
T ss_dssp             HHHTTSSCSCEETT
T ss_pred             HHHhhCCCCCCCCC
Confidence            99999999997643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.00028  Score=63.35  Aligned_cols=43  Identities=23%  Similarity=0.283  Sum_probs=37.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .|....|+||+|++++++++|.++|..
T Consensus       161 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DiwSlGvil~el~~g~~pf~~  203 (299)
T d1ua2a_         161 VVTRWYRAPELLFGAR--------------------------MYGVGVDMWAVGCILAELLLRVPFLPG  203 (299)
T ss_dssp             CCCCTTCCHHHHTTCS--------------------------CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ecChhhccHHHHccCC--------------------------CCChhhhhhhcchHHHHHHhCcCCCCC
Confidence            4678899999987765                          567889999999999999999988865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.00031  Score=62.91  Aligned_cols=47  Identities=15%  Similarity=0.061  Sum_probs=37.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+.....                      ..|....|+||+|++++++++|..+|..
T Consensus       171 ~Gt~~y~APE~l~~~~~~~----------------------~~y~~k~DiwSlGvilyemltg~~Pf~~  217 (288)
T d2jfla1         171 IGTPYWMAPEVVMCETSKD----------------------RPYDYKADVWSLGITLIEMAEIEPPHHE  217 (288)
T ss_dssp             CSCCTTCCHHHHTTCSTTT----------------------SSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccccCCHHHHhhcccCC----------------------CCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence            3678899999987543211                      1467789999999999999999998865

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.82  E-value=0.00045  Score=62.73  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=37.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+..                           |....|+|++|++++++++|..+|..
T Consensus       162 ~Gt~~Y~APE~l~~~~---------------------------y~~~~DiwSlGvilyemltG~~Pf~~  203 (316)
T d1fota_         162 CGTPDYIAPEVVSTKP---------------------------YNKSIDWWSFGILIYEMLAGYTPFYD  203 (316)
T ss_dssp             CSCTTTCCHHHHTTCC---------------------------BCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCcccccCHHHHcCCC---------------------------CCchhhccccchhHHHHHhCCCCCCC
Confidence            5788899999998865                           56788999999999999999999865

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=95.80  E-value=0.00038  Score=64.22  Aligned_cols=172  Identities=14%  Similarity=0.171  Sum_probs=93.7

Q ss_pred             CCcceEEEEE-ecCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC----------CCCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRF-SSDDRRFFSKILSNPITLAQQPKKELIINEILVMREN----------KHPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~-~~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l----------~h~niv~~~~~~~~~~~~~lv~   69 (400)
                      +|.|.++.+. ..++..+|.|++.+........-.+++ +-+..++.-          ...++.-+.+++..+.    +.
T Consensus        37 G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~-~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~----L~  111 (350)
T d1koaa2          37 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEI-QTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE----LF  111 (350)
T ss_dssp             ETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHH-HHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCB----HH
T ss_pred             CcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHH-HHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCC----HH
Confidence            5789888876 467888999998776544333222222 223333321          1122222333333221    12


Q ss_pred             ecc--CCCChHHHHhhcCCCHHHHHHHHHHH--HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          70 EYL--PGGSLTDVVTETCMDEGQIAAVCREV--LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        70 e~~--~~~~L~~~i~~~~l~~~~~~~i~~qi--~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +++  ..+.+..-...     ..+..++..+  +.....+|.    .+|.-.+=....+.+.+-|..+..+-.  ..   
T Consensus       112 ~~l~~~~~~l~e~~~~-----~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~---  181 (350)
T d1koaa2         112 EKVADEHNKMSEDEAV-----EYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QS---  181 (350)
T ss_dssp             HHHTCTTSCBCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--SC---
T ss_pred             HHHHhhcCCCCHHHHH-----HHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc--cc---
Confidence            332  12233221111     1122222222  344555674    255433223345777777766544322  11   


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                        ..           ...||..|+|||.+.+..                           |....|+|++|++++++++|
T Consensus       182 --~~-----------~~~gT~~Y~aPEv~~~~~---------------------------~~~~~DiwSlGvilyell~G  221 (350)
T d1koaa2         182 --VK-----------VTTGTAEFAAPEVAEGKP---------------------------VGYYTDMWSVGVLSYILLSG  221 (350)
T ss_dssp             --EE-----------EECSCTTTCCHHHHHTCC---------------------------BCHHHHHHHHHHHHHHHHHS
T ss_pred             --cc-----------eecCcccccCHHHHcCCC---------------------------CChhHhhhhhhHHHHHHHhC
Confidence              11           124688899999998865                           56678999999999999999


Q ss_pred             cccccc
Q psy9736         222 EELWYT  227 (400)
Q Consensus       222 ~~~~~~  227 (400)
                      ..+|..
T Consensus       222 ~~Pf~~  227 (350)
T d1koaa2         222 LSPFGG  227 (350)
T ss_dssp             SCSSCC
T ss_pred             CCCCCC
Confidence            999865

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.78  E-value=0.00046  Score=63.59  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=55.1

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|.-.  +-.++-+.+-|..+..+=.   ..                 ...||..|+|||.+.++.
T Consensus       157 LH~~~iiHRDIKP~NILl~--~~g~ikL~DFG~a~~~~~~---~~-----------------~~~Gt~~Y~APE~~~~~~  214 (350)
T d1rdqe_         157 LHSLDLIYRDLKPENLLID--QQGYIQVTDFGFAKRVKGR---TW-----------------TLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             HHHTTEECCCCSGGGEEEC--TTSCEEECCCTTCEECSSC---BC-----------------CCEECGGGCCHHHHTTCC
T ss_pred             HHhCCEecCcCCHHHcccC--CCCCEEeeeceeeeecccc---cc-----------------cccCccccCCHHHHcCCC
Confidence            445556673    244421  1246777777776654321   11                 024788899999999875


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                 +....|+|++|++++++++|..+|..
T Consensus       215 ---------------------------~~~~~DiwSlGvilyemltG~~Pf~~  240 (350)
T d1rdqe_         215 ---------------------------YNKAVDWWALGVLIYEMAAGYPPFFA  240 (350)
T ss_dssp             ---------------------------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------------------CCccccccchhHHHHHHHhCCCCCCC
Confidence                                       56788999999999999999999865

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0005  Score=62.20  Aligned_cols=44  Identities=14%  Similarity=0.097  Sum_probs=38.8

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..+|..|+|||.+.+..                          .+....|+|++|+++.++++|..+|.+
T Consensus       181 ~~gT~~Y~aPE~~~~~~--------------------------~~~~k~DiwSlGvil~el~~g~~pf~~  224 (318)
T d3blha1         181 RVVTLWYRPPELLLGER--------------------------DYGPPIDLWGAGCIMAEMWTRSPIMQG  224 (318)
T ss_dssp             CCSCGGGCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             eecCHHHhhHHHHcCCC--------------------------CCCcHHHcccCCceeeeHhhCCCCCCC
Confidence            35788999999998876                          577889999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.00052  Score=61.47  Aligned_cols=67  Identities=12%  Similarity=0.050  Sum_probs=49.9

Q ss_pred             CCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCch
Q psy9736         116 KSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNI  195 (400)
Q Consensus       116 kp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
                      ...++.+.+-|..+..+.+  -..    .            ...+|..|+|||.+.+..                     
T Consensus       152 ~~~~vkl~DfG~a~~~~~~--~~~----~------------~~~~t~~y~APE~~~~~~---------------------  192 (293)
T d1jksa_         152 PKPRIKIIDFGLAHKIDFG--NEF----K------------NIFGTPEFVAPEIVNYEP---------------------  192 (293)
T ss_dssp             SSCCEEECCCTTCEECTTS--CBC----S------------CCCCCGGGCCHHHHTTCC---------------------
T ss_pred             cccceEecchhhhhhcCCC--ccc----c------------ccCCCCcccCHHHHcCCC---------------------
Confidence            3446777777877766654  111    1            124577899999998764                     


Q ss_pred             hhhhhhhccccccceeeeeccccccccccccc
Q psy9736         196 VNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                            +....|+||+|++++++++|..+|..
T Consensus       193 ------~~~~~DiwSlGvilyell~g~~Pf~~  218 (293)
T d1jksa_         193 ------LGLEADMWSIGVITYILLSGASPFLG  218 (293)
T ss_dssp             ------BCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ------CCCcccchhhhHHHHHHHcCCCCCCC
Confidence                  66788999999999999999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.69  E-value=0.00059  Score=61.16  Aligned_cols=93  Identities=15%  Similarity=0.185  Sum_probs=58.9

Q ss_pred             HHHHHHHHh----CCeecCCCC-CCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCC
Q psy9736          99 LQALEFLHS----NQVIHRDIK-SDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGM  173 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dik-p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~  173 (400)
                      +.....+|.    .+|...... ..++.+.+-|..+...-+. ........         ......||..|+|||.+.|.
T Consensus       119 lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~  188 (299)
T d1ckia_         119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR-THQHIPYR---------ENKNLTGTARYASINTHLGI  188 (299)
T ss_dssp             HHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT-TCCBCCCC---------BCCSCCCCSSSCCHHHHTTB
T ss_pred             HHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc-cccceecc---------ccCCcCCCccccCHHHHhCC
Confidence            344556673    245322221 2346666777766554320 11101111         12345789999999999887


Q ss_pred             CCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         174 EPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .                           +....|+|++|+++.++++|..+|...
T Consensus       189 ~---------------------------~~~~~DiwSlG~~l~el~tg~~P~~~~  216 (299)
T d1ckia_         189 E---------------------------QSRRDDLESLGYVLMYFNLGSLPWQGL  216 (299)
T ss_dssp             C---------------------------CCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             C---------------------------CCChhhEEecCHHHHHHHhCCCccccc
Confidence            5                           567899999999999999999998763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=95.28  E-value=0.00086  Score=61.75  Aligned_cols=173  Identities=14%  Similarity=0.158  Sum_probs=92.2

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHH--HHHHHHH---HHHh---C-CCCCcccccceeEeCCEEEEEEe
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKE--LIINEIL---VMRE---N-KHPNIVNYLDSYLVGEELWVVME   70 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~--~~~~Ei~---~l~~---l-~h~niv~~~~~~~~~~~~~lv~e   70 (400)
                      +|.|.++.+.. .++..+|.|++-+........-..  .+.+.+.   +++-   . ...++.-+.+++.. +.+   .+
T Consensus        40 G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g-g~L---~~  115 (352)
T d1koba_          40 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG-GEL---FD  115 (352)
T ss_dssp             ETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC-CBH---HH
T ss_pred             CCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC-ChH---HH
Confidence            57898888775 678889999987765433322222  2233322   1111   1 12222222333332 211   22


Q ss_pred             ccC--CCChHHHHhhcCCCHHHHHHHHHH--HHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          71 YLP--GGSLTDVVTETCMDEGQIAAVCRE--VLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        71 ~~~--~~~L~~~i~~~~l~~~~~~~i~~q--i~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      ++.  +..|......     ..+..++..  .+.....+|.    .+|.-..-+..++.+.+-|..+..+=+      ..
T Consensus       116 ~~~~~~~~l~e~~~~-----~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~------~~  184 (352)
T d1koba_         116 RIAAEDYKMSEAEVI-----NYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD------EI  184 (352)
T ss_dssp             HTTCTTCCBCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT------SC
T ss_pred             HHHhcCCCCCHHHHH-----HHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC------Cc
Confidence            221  2223221111     112222222  2344455674    255543334457777777766654322      00


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ...            ..+|..|+|||.+.+..                           +....|+|++|++++++++|.
T Consensus       185 ~~~------------~~gt~~y~aPE~~~~~~---------------------------~~~~~DiwSlGvilyelltG~  225 (352)
T d1koba_         185 VKV------------TTATAEFAAPEIVDREP---------------------------VGFYTDMWAIGVLGYVLLSGL  225 (352)
T ss_dssp             EEE------------ECSSGGGCCHHHHTTCC---------------------------BCHHHHHHHHHHHHHHHHHSC
T ss_pred             eee------------ccCcccccCHHHHcCCC---------------------------CCCccchHHHHHHHHHHHhCC
Confidence            111            12567899999998865                           567789999999999999999


Q ss_pred             ccccc
Q psy9736         223 ELWYT  227 (400)
Q Consensus       223 ~~~~~  227 (400)
                      .+|..
T Consensus       226 ~Pf~~  230 (352)
T d1koba_         226 SPFAG  230 (352)
T ss_dssp             CSSCC
T ss_pred             CCCCC
Confidence            99865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.00087  Score=60.91  Aligned_cols=42  Identities=17%  Similarity=0.116  Sum_probs=35.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                           +....|+||+|+++.++++ |.++|...
T Consensus       228 gt~~y~aPE~l~~~~---------------------------~~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         228 LPVKWMAPESLFEGI---------------------------YTIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             ECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CCCccCChHHHcCCC---------------------------CCcceeccchhHHHHHHHhCCCCCCCCC
Confidence            577899999987654                           5678899999999999997 88888653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.0011  Score=58.83  Aligned_cols=42  Identities=10%  Similarity=0.126  Sum_probs=35.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+||+|+++.|+++ |..+|..
T Consensus       171 ~gt~~y~APE~l~~~~---------------------------~~~~sDiwS~Gv~l~ellt~g~~Pf~~  213 (277)
T d1xbba_         171 KWPVKWYAPECINYYK---------------------------FSSKSDVWSFGVLMWEAFSYGQKPYRG  213 (277)
T ss_dssp             CCCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             CCCceecCchhhcCCC---------------------------CCchhhhccchhhhhHHhhCCCCCCCC
Confidence            4677899999987653                           6678899999999999997 8888865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.0017  Score=57.04  Aligned_cols=40  Identities=8%  Similarity=0.049  Sum_probs=32.3

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc-ccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG-EELWY  226 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~  226 (400)
                      +|..|+|||.+.+..                           +....|+||+|+++.|++++ .+++.
T Consensus       164 gt~~y~aPE~l~~~~---------------------------~~~k~DVwS~Gvil~el~t~~~~~~~  204 (263)
T d1sm2a_         164 FPVKWASPEVFSFSR---------------------------YSSKSDVWSFGVLMWEVFSEGKIPYE  204 (263)
T ss_dssp             -CTTSCCHHHHTTCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             cCcccCChHHhcCCC---------------------------CCchhhhcchHHHHHHHHHCCCCCCC
Confidence            577899999998865                           56788999999999999995 55443

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.0016  Score=59.61  Aligned_cols=43  Identities=21%  Similarity=0.351  Sum_probs=38.1

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .++..|+|||...+..                          .+....|+|++|++++++++|.++|..
T Consensus       183 ~gt~~y~aPE~~~~~~--------------------------~~~~~~DIwSlG~il~el~~g~~pf~~  225 (350)
T d1q5ka_         183 ICSRYYRAPELIFGAT--------------------------DYTSSIDVWSAGCVLAELLLGQPIFPG  225 (350)
T ss_dssp             CSCTTSCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cccccccChHHhhccc--------------------------CCCcceeecccceEEEehhhCCCCCCC
Confidence            4788899999988766                          578899999999999999999999865

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.55  E-value=0.0019  Score=58.24  Aligned_cols=45  Identities=11%  Similarity=0.101  Sum_probs=37.4

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .||..|+|||.+.+....                        .|....|+||+|++++++++|..+|..
T Consensus       172 ~GT~~Y~APE~~~~~~~~------------------------~y~~~~DiwSlGvilyel~~g~~Pf~~  216 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEG------------------------QYDGKVDVWSLGITCIELAERKPPLFN  216 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSC------------------------CBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCccccCHHHHhccCCC------------------------CcCchhhhhhHHHHHHHHHHCCCCCCC
Confidence            478889999999875421                        467789999999999999999988864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.0012  Score=59.67  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=34.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.|+++ |.++|..
T Consensus       174 ~gt~~y~APE~l~~~~---------------------------~~~~sDvwS~Gvil~el~t~g~~p~~~  216 (317)
T d1xkka_         174 KVPIKWMALESILHRI---------------------------YTHQSDVWSYGVTVWELMTFGSKPYDG  216 (317)
T ss_dssp             -CCTTTSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccCccccChHHHhcCC---------------------------CChhhhhhhHHHHHHHHHHCCCCCCCC
Confidence            3677899999987764                           6678999999999999998 6777765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.0045  Score=55.07  Aligned_cols=43  Identities=12%  Similarity=0.076  Sum_probs=34.5

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc-ccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE-ELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~  227 (400)
                      ..||..|+|||.+.+..                           +....|+|++|+++.+++++. ++|..
T Consensus       196 ~~gt~~y~APE~l~~~~---------------------------~~~~sDiwS~Gvil~ellt~~~~p~~~  239 (299)
T d1ywna1         196 ARLPLKWMAPETIFDRV---------------------------YTIQSDVWSFGVLLWEIFSLGASPYPG  239 (299)
T ss_dssp             CCCGGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             eeeCccccchhHhhcCC---------------------------CCcccceeehHHHHHHHHhCCCCCCCC
Confidence            35788899999988764                           567889999999999999874 44543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.0022  Score=58.52  Aligned_cols=43  Identities=16%  Similarity=0.285  Sum_probs=37.3

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                          .+....|+|++|+++.++++|.++|..
T Consensus       179 ~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwSlGvil~ell~g~~pf~~  221 (346)
T d1cm8a_         179 VVTRWYRAPEVILNWM--------------------------RYTQTVDIWSVGCIMAEMITGKTLFKG  221 (346)
T ss_dssp             CSCGGGCCTHHHHTTT--------------------------CCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccCHHHHcCCC--------------------------CCCccchhhcchHHHHHHHHCcCCCCC
Confidence            4677899999998866                          467789999999999999999998865

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.0026  Score=58.04  Aligned_cols=87  Identities=11%  Similarity=0.166  Sum_probs=57.2

Q ss_pred             HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCC
Q psy9736          99 LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGME  174 (400)
Q Consensus        99 ~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  174 (400)
                      +.....+|.    .+|+-.  +..++-+..-|..+....+  .   .......         ...++..|+|||.+....
T Consensus       125 LH~~~iiHRDIKp~NILl~--~~~~~kl~DfG~a~~~~~~--~---~~~~~~~---------~~~gt~~y~aPE~l~~~~  188 (345)
T d1pmea_         125 IHSANVLHRDLKPSNLLLN--TTCDLKICDFGLARVADPD--H---DHTGFLT---------EYVATRWYRAPEIMLNSK  188 (345)
T ss_dssp             HHHTTEECCCCCGGGEEEC--TTCCEEECCCTTCEECCGG--G---CBCCTTC---------CCCSCGGGCCGGGTTTBC
T ss_pred             HHHCCCcCCCCCcceEEEC--CCCCEEEcccCceeeccCC--C---ccceeec---------cccccceechHHHhhcCC
Confidence            344455663    255432  3456777777776655433  1   1111111         135788899999986655


Q ss_pred             CchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         175 PKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                .+....|+|++|+++.++++|..+|..
T Consensus       189 --------------------------~~~~~~DiwSlG~il~eml~g~~pf~~  215 (345)
T d1pmea_         189 --------------------------GYTKSIDIWSVGCILAEMLSNRPIFPG  215 (345)
T ss_dssp             --------------------------SCSTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             --------------------------CCCchhhhhccCceehHHhhCCCCCCC
Confidence                                      467789999999999999999999865

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.0025  Score=58.42  Aligned_cols=42  Identities=19%  Similarity=0.296  Sum_probs=35.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       179 ~~t~~y~aPE~l~~~~---------------------------~~~~~DiwSlG~~l~ell~g~~pF~~  220 (355)
T d2b1pa1         179 VVTRYYRAPEVILGMG---------------------------YKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_dssp             --CCTTCCHHHHTTCC---------------------------CCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccChhhhcCCC---------------------------CCCCcccccccchHHHHhhCCCCCCC
Confidence            3577899999998864                           66789999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.0018  Score=57.55  Aligned_cols=42  Identities=12%  Similarity=0.090  Sum_probs=35.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+||+|+++.|+++ |..+|..
T Consensus       173 ~gt~~y~aPE~~~~~~---------------------------~~~ksDVwS~Gv~l~E~lt~G~~Pf~~  215 (285)
T d1u59a_         173 KWPLKWYAPECINFRK---------------------------FSSRSDVWSYGVTMWEALSYGQKPYKK  215 (285)
T ss_dssp             CCCGGGCCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ccCccccChHHHhCCC---------------------------CCccchhhcchHHHHHHHhCCCCCCCC
Confidence            4677899999987653                           6678899999999999998 8888865

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.0026  Score=56.76  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=37.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||...+..                          .+....|+||+|++++++++|..+|..
T Consensus       163 ~gt~~y~apE~~~~~~--------------------------~~~~~~DiwSlGvily~m~~G~~Pf~~  205 (298)
T d1gz8a_         163 VVTLWYRAPEILLGCK--------------------------YYSTAVDIWSLGCIFAEMVTRRALFPG  205 (298)
T ss_dssp             BCCCTTCCHHHHTTCS--------------------------SCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccceeeehhhhcccc--------------------------CCCccccccccchhhhHHhhCCCCCCC
Confidence            3678899999988776                          456789999999999999999998864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.02  E-value=0.0043  Score=55.49  Aligned_cols=49  Identities=8%  Similarity=-0.140  Sum_probs=37.3

Q ss_pred             ccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         158 VASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       158 ~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ..||..|+|||.+.+..-..                     ...+....|+|++|+++.|+++|.+++..
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~---------------------~~~~~~k~Di~S~Gvvl~el~tg~~~~~~  220 (303)
T d1vjya_         172 RVGTKRYMAPEVLDDSINMK---------------------HFESFKRADIYAMGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             CCSCGGGCCHHHHTTCSCTT---------------------CHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred             eecccCcCChhhcccccccc---------------------CCCcCcchhhhhhHHHHHHHhhCCCCCCc
Confidence            46889999999988754110                     01356778999999999999999877654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.0039  Score=56.35  Aligned_cols=45  Identities=13%  Similarity=0.183  Sum_probs=36.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccCC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTKP  229 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  229 (400)
                      ++..|++||.+.+...                         .+....|+||+|++++++++|..+|....
T Consensus       192 g~~~~~~pe~~~~~~~-------------------------~~~~ksDIWSlG~iLyelltG~~PF~~~~  236 (322)
T d1vzoa_         192 GTIEYMAPDIVRGGDS-------------------------GHDKAVDWWSLGVLMYELLTGASPFTVDG  236 (322)
T ss_dssp             SCCTTCCHHHHTTCC----------------------------CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred             cccccchhHHhhcCCc-------------------------CCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            5678999999987652                         35567899999999999999999997643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.0022  Score=56.53  Aligned_cols=42  Identities=14%  Similarity=0.127  Sum_probs=34.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-cccccccC
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYTK  228 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~  228 (400)
                      +|..|+|||.+.+..                           +....|+|++|+++.++++ |.++|...
T Consensus       171 gt~~y~apE~l~~~~---------------------------~~~~~DiwSlGvil~e~lt~g~~P~~~~  213 (273)
T d1mp8a_         171 LPIKWMAPESINFRR---------------------------FTSASDVWMFGVCMWEILMHGVKPFQGV  213 (273)
T ss_dssp             CCGGGCCHHHHHHCC---------------------------CSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cCcccchhhHhccCC---------------------------CCCccccccchHHHHHHHhcCCCCCCCC
Confidence            567799999987764                           5677899999999999998 78877653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=93.73  E-value=0.0031  Score=55.77  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=36.7

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||.+.+..                          .+....|+|++|+++.++++|..+|..
T Consensus       162 ~~~~y~~pE~~~~~~--------------------------~~~~~~DiwslGv~l~el~~G~~pf~~  203 (286)
T d1ob3a_         162 VTLWYRAPDVLMGSK--------------------------KYSTTIDIWSVGCIFAEMVNGTPLFPG  203 (286)
T ss_dssp             CCCTTCCHHHHTTCC--------------------------SCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccchhhhHHHHhCCC--------------------------CCCcceeehhcCcHHHHHHHCCCCCCC
Confidence            456799999998876                          567889999999999999999999865

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.58  E-value=0.0033  Score=55.66  Aligned_cols=40  Identities=13%  Similarity=0.068  Sum_probs=32.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      .+|..|+|||.+.+..                           +....|+||+|+++.|++++..++
T Consensus       174 ~gt~~Y~APE~l~~~~---------------------------~~~~sDI~S~Gvil~el~t~~~~~  213 (283)
T d1mqba_         174 KIPIRWTAPEAISYRK---------------------------FTSASDVWSFGIVMWEVMTYGERP  213 (283)
T ss_dssp             CCCGGGSCHHHHHSCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCCccccCHHHHccCC---------------------------CCCcccccccHHHHHHHHhCCCCc
Confidence            4677899999988765                           566789999999999999965443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.0029  Score=57.27  Aligned_cols=171  Identities=14%  Similarity=0.153  Sum_probs=90.2

Q ss_pred             CCcceEEEEEec-CCCceeEEEEeccccccCcchHHHHHHHHHHHHhCC----------CCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRFSS-DDRRFFSKILSNPITLAQQPKKELIINEILVMRENK----------HPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~----------h~niv~~~~~~~~~~~~~lv~   69 (400)
                      ++.|.++.+... +++.+|.|++-+.-..... ..+++ +-+..++.-+          ..++.-+.+++.. +.   +.
T Consensus        16 G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~-~~~Ei-~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~g-g~---L~   89 (321)
T d1tkia_          16 GEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEI-SILNIARHRNILHLHESFESMEELVMIFEFISG-LD---IF   89 (321)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECCCTHHHHH-HHHHH-HHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC-CB---HH
T ss_pred             CCCeEEEEEEECCCCcEEEEEEEcCCcccHHH-HHHHH-HHHHhCCCCCCCeEEEEEEECCEEEEEEecCCC-Cc---HH
Confidence            578988888765 6777888888665443322 22222 1233333321          2222222333332 21   22


Q ss_pred             eccC--CCChHHHHhhcCCCHHHHHHHHH--HHHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhh
Q psy9736          70 EYLP--GGSLTDVVTETCMDEGQIAAVCR--EVLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKL  141 (400)
Q Consensus        70 e~~~--~~~L~~~i~~~~l~~~~~~~i~~--qi~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~  141 (400)
                      +++.  ++.+.+....     .....++.  +.+.....+|.    .+|.-.+=...+|.+.+-|..+...-+      .
T Consensus        90 ~~i~~~~~~l~e~~~~-----~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~------~  158 (321)
T d1tkia_          90 ERINTSAFELNEREIV-----SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG------D  158 (321)
T ss_dssp             HHHTSSSCCCCHHHHH-----HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT------C
T ss_pred             HHHHhcCCCCCHHHHH-----HHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC------C
Confidence            3332  2233221111     11122222  22344455663    255433323446666666766544322      1


Q ss_pred             ccccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccc
Q psy9736         142 YIEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVG  221 (400)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  221 (400)
                      ....            ..+|..|+|||...+..                           |....|+|++|++++++++|
T Consensus       159 ~~~~------------~~~t~~y~ape~~~~~~---------------------------~~~~~DiWSlGvily~ll~G  199 (321)
T d1tkia_         159 NFRL------------LFTAPEYYAPEVHQHDV---------------------------VSTATDMWSLGTLVYVLLSG  199 (321)
T ss_dssp             EEEE------------EESCGGGSCHHHHTTCE---------------------------ECHHHHHHHHHHHHHHHHHS
T ss_pred             cccc------------cccccccccchhccCCC---------------------------CCchhhcccHHHHHHHHHhC
Confidence            1111            12467799999987764                           67789999999999999999


Q ss_pred             cccccc
Q psy9736         222 EELWYT  227 (400)
Q Consensus       222 ~~~~~~  227 (400)
                      ..+|..
T Consensus       200 ~~Pf~~  205 (321)
T d1tkia_         200 INPFLA  205 (321)
T ss_dssp             SCTTCC
T ss_pred             CCCCCC
Confidence            999865

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.0032  Score=55.00  Aligned_cols=42  Identities=7%  Similarity=0.074  Sum_probs=35.5

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .++..|+|||.+.++.                           +....|+|++|+++.++++ |..+|..
T Consensus       162 ~~t~~y~aPE~~~~~~---------------------------~~~ksDiwS~G~~l~el~t~g~~Pf~~  204 (258)
T d1k2pa_         162 KFPVRWSPPEVLMYSK---------------------------FSSKSDIWAFGVLMWEIYSLGKMPYER  204 (258)
T ss_dssp             CCCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CCCCCcCCcHHhcCCC---------------------------CCcceeecccchhhHhHHhcCCCCCCC
Confidence            4677899999988765                           5678999999999999998 7877765

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.0028  Score=55.86  Aligned_cols=168  Identities=11%  Similarity=0.151  Sum_probs=86.5

Q ss_pred             CCcceEEEEEecCCCceeEEEEeccccccCcchHH-HHHHHHH---HHHhC---CCCCcccccceeEeCCEEEEEEeccC
Q psy9736           1 MKRGVTIDRFSSDDRRFFSKILSNPITLAQQPKKE-LIINEIL---VMREN---KHPNIVNYLDSYLVGEELWVVMEYLP   73 (400)
Q Consensus         1 ~g~G~~~~v~~~~~~~~~~~va~K~~~~~~~~~~~-~~~~Ei~---~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~   73 (400)
                      +|.|.++++....+..+|.|++-+.........+| .+...+.   +++-+   ...++.-+.+++..+.    +.+++.
T Consensus        24 G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~----L~~~~~   99 (272)
T d1qpca_          24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS----LVDFLK   99 (272)
T ss_dssp             ETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTCB----HHHHTT
T ss_pred             CCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCCCc----HHHHHh
Confidence            57899999999999999999886654333322221 2222221   11111   2233322233333221    111221


Q ss_pred             C-----CChHHHHhhcCCCHHHHHHHHHHH--HHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhc
Q psy9736          74 G-----GSLTDVVTETCMDEGQIAAVCREV--LQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLY  142 (400)
Q Consensus        74 ~-----~~L~~~i~~~~l~~~~~~~i~~qi--~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~  142 (400)
                      .     .+....+       ..+..++..+  +..-..+|.    .+|.-.  .-.++.+.+-|..+...-+      ..
T Consensus       100 ~~~~~~l~~~~~~-------~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~--~~~~~Kl~DFGla~~~~~~------~~  164 (272)
T d1qpca_         100 TPSGIKLTINKLL-------DMAAQIAEGMAFIEERNYIHRDLRAANILVS--DTLSCKIADFGLARLIEDN------EY  164 (272)
T ss_dssp             SHHHHTCCHHHHH-------HHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--TTSCEEECCCTTCEECSSS------CE
T ss_pred             hcCCCCCCHHHHH-------HHHHHHHHHHHHHHhCCcccCccchhheeee--cccceeeccccceEEccCC------cc
Confidence            1     1222221       1223333222  334445663    244321  1234567777776654322      11


Q ss_pred             cccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc
Q psy9736         143 IEISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE  222 (400)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  222 (400)
                      ....          ...++..|+|||.+.+..                           +....|+||+|+++.+++++.
T Consensus       165 ~~~~----------~~~gt~~y~APE~~~~~~---------------------------~~~~sDvwS~Gvvl~ellt~~  207 (272)
T d1qpca_         165 TARE----------GAKFPIKWTAPEAINYGT---------------------------FTIKSDVWSFGILLTEIVTHG  207 (272)
T ss_dssp             ECCT----------TCCCCTTTSCHHHHHHCE---------------------------ECHHHHHHHHHHHHHHHHTTT
T ss_pred             cccc----------ccCCcccccChHHHhCCC---------------------------CCchhhhhhhHHHHHHHHhCC
Confidence            1111          124677899999987653                           667889999999999999964


Q ss_pred             cc
Q psy9736         223 EL  224 (400)
Q Consensus       223 ~~  224 (400)
                      .+
T Consensus       208 ~~  209 (272)
T d1qpca_         208 RI  209 (272)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=92.77  E-value=0.0055  Score=55.25  Aligned_cols=170  Identities=10%  Similarity=0.100  Sum_probs=90.1

Q ss_pred             CCcceEEEEEe-cCCCceeEEEEeccccccCcchHHHHHHHHHHHHhC----------CCCCcccccceeEeCCEEEEEE
Q psy9736           1 MKRGVTIDRFS-SDDRRFFSKILSNPITLAQQPKKELIINEILVMREN----------KHPNIVNYLDSYLVGEELWVVM   69 (400)
Q Consensus         1 ~g~G~~~~v~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~Ei~~l~~l----------~h~niv~~~~~~~~~~~~~lv~   69 (400)
                      ++.|.++.+.. .+++.+|.|++-+. ....-...-.++..+.--..+          .+.++.-+.+++..+.    +.
T Consensus        46 G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~----L~  120 (328)
T d3bqca1          46 GKYSEVFEAINITNNEKVVVKILKPV-KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD----FK  120 (328)
T ss_dssp             CSSEEEEEEEETTTTEEEEEEEECSS-CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCB----GG
T ss_pred             CcCeEEEEEEECCCCCEEEEEEECHH-HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCc----HH
Confidence            57898888765 56777888886544 444332223344444311111          1222333333333221    11


Q ss_pred             eccCCCChHHHHhhcCCCHHHHHHHHH--HHHHHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhcc
Q psy9736          70 EYLPGGSLTDVVTETCMDEGQIAAVCR--EVLQALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYI  143 (400)
Q Consensus        70 e~~~~~~L~~~i~~~~l~~~~~~~i~~--qi~~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~  143 (400)
                      .+...-+.... .      .....++.  +-+.....+|.    .+|.- +-.-..+.+..-|..+..+-+  ..  .  
T Consensus       121 ~~~~~l~e~~i-~------~i~~qil~aL~~LH~~gIvHrDiKp~NILi-~~~~~~vkl~DFG~a~~~~~~--~~--~--  186 (328)
T d3bqca1         121 QLYQTLTDYDI-R------FYMYEILKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPG--QE--Y--  186 (328)
T ss_dssp             GTTTSCCHHHH-H------HHHHHHHHHHHHHHHTTEECCCCSGGGEEE-ETTTTEEEECCGGGCEECCTT--CC--C--
T ss_pred             HHhcCCCHHHH-H------HHHHHHHHHHHHHhhcccccccccccceEE-cCCCCeeeecccccceeccCC--Cc--c--
Confidence            22222122211 1      12333333  22444555673    24542 111123556666666554322  11  1  


Q ss_pred             ccchhhccccccccccccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccc
Q psy9736         144 EISKVIIYCWDWTAVASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEE  223 (400)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  223 (400)
                       .           ...+|..|+|||.+.+..                          .+....|+|++|+++.++++|..
T Consensus       187 -~-----------~~~~t~~y~aPE~~~~~~--------------------------~~~~~~DiwslG~~l~e~~~g~~  228 (328)
T d3bqca1         187 -N-----------VRVASRYFKGPELLVDYQ--------------------------MYDYSLDMWSLGCMLASMIFRKE  228 (328)
T ss_dssp             -C-----------SCCSCGGGCCHHHHTTCC--------------------------CCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             -c-----------ccccCccccCcccccCCC--------------------------CCCcccchhhhhhhhHHhccCCC
Confidence             0           124678899999998876                          56778899999999999999998


Q ss_pred             cccc
Q psy9736         224 LWYT  227 (400)
Q Consensus       224 ~~~~  227 (400)
                      +|..
T Consensus       229 pf~~  232 (328)
T d3bqca1         229 PFFH  232 (328)
T ss_dssp             SSSC
T ss_pred             CCCC
Confidence            8765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.0051  Score=54.83  Aligned_cols=42  Identities=14%  Similarity=0.130  Sum_probs=34.7

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .++..|+|||.+.+..                           |....|+|++|+++.++++ |.++|..
T Consensus       198 ~~~~~y~aPE~l~~~~---------------------------y~~k~DiwS~Gvvl~ell~~g~~p~~~  240 (299)
T d1fgka_         198 RLPVKWMAPEALFDRI---------------------------YTHQSDVWSFGVLLWEIFTLGGSPYPG  240 (299)
T ss_dssp             CCGGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCChhhhhhhHhcCCC---------------------------CCchhhhHHhHHHHHHhccCCCCCCCC
Confidence            4577899999987754                           6678899999999999998 6777764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.0049  Score=54.24  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=34.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.|+++ |..+|..
T Consensus       176 ~~~~~~aPE~~~~~~---------------------------~~~~~Di~S~Gvil~emlt~G~~Pf~~  217 (273)
T d1u46a_         176 VPFAWCAPESLKTRT---------------------------FSHASDTWMFGVTLWEMFTYGQEPWIG  217 (273)
T ss_dssp             CCGGGCCHHHHHHCE---------------------------EEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCcccCCHHHHhCCC---------------------------CCcchhhhhhHHHHHHHHhCCCCCCCC
Confidence            456799999988754                           5677899999999999998 7888865

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=92.11  E-value=0.0073  Score=53.24  Aligned_cols=49  Identities=14%  Similarity=0.194  Sum_probs=36.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccccC
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYTK  228 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  228 (400)
                      .||..|+|||.+.+....                     ....+....|+|++|++++++++|..+|...
T Consensus       170 ~gt~~y~~PE~~~~~~~~---------------------~~~~~~~~~DiwslGvilyeml~g~~Pf~~~  218 (277)
T d1phka_         170 CGTPSYLAPEIIECSMND---------------------NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR  218 (277)
T ss_dssp             CSCGGGCCHHHHHHHHCT---------------------TSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eccCCCCCHHHhhccccc---------------------cCCCCCchheEcccchhhhhhccCCCCCCCC
Confidence            367889999998653200                     0014567789999999999999999998753

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.05  E-value=0.44  Score=42.09  Aligned_cols=56  Identities=7%  Similarity=0.027  Sum_probs=33.6

Q ss_pred             EEEEeccccccCcchHHHHHHHHHHHHhCCCCCc--c---cc--cceeEeCCEEEEEEeccCCC
Q psy9736          19 SKILSNPITLAQQPKKELIINEILVMRENKHPNI--V---NY--LDSYLVGEELWVVMEYLPGG   75 (400)
Q Consensus        19 ~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~h~ni--v---~~--~~~~~~~~~~~lv~e~~~~~   75 (400)
                      .++++|..... ....+++..|+..+..|....+  +   ..  -..+..++..+.++++++|.
T Consensus        47 ~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          47 RRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             CCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             CEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            34666664433 2355778889988887742222  1   11  12334567889999998763

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.0056  Score=53.52  Aligned_cols=41  Identities=15%  Similarity=0.164  Sum_probs=33.2

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      ++..|+|||.+.+..                           +....|+||+|+++.|+++ |.++|..
T Consensus       162 ~~~~y~aPE~l~~~~---------------------------~t~~sDIwSfG~il~el~t~~~~p~~~  203 (262)
T d1byga_         162 LPVKWTAPEALREKK---------------------------FSTKSDVWSFGILLWEIYSFGRVPYPR  203 (262)
T ss_dssp             CCTTTSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred             ccccCCChHHHhCCC---------------------------CChHHHHHhHHHHHHHHHHCCCCCCCC
Confidence            356799999987754                           5678999999999999998 6776654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.0073  Score=54.80  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=36.5

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      ++..|+|||...+..                          .+....|+|++|++++++++|..+|.+
T Consensus       180 g~~~y~apE~~~~~~--------------------------~~~~~~DiwSlGv~l~~ll~g~~pF~~  221 (348)
T d2gfsa1         180 ATRWYRAPEIMLNWM--------------------------HYNQTVDIWSVGCIMAELLTGRTLFPG  221 (348)
T ss_dssp             HHHHTSCHHHHTTCS--------------------------CCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccCchhhcCCc--------------------------cCCcccchhhhhHHHHHHHhCCCCCCC
Confidence            566799999988876                          567889999999999999999999865

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.12  E-value=0.01  Score=53.09  Aligned_cols=42  Identities=17%  Similarity=0.202  Sum_probs=34.0

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccc-ccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLV-GEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++ |.+.+..
T Consensus       208 ~gt~~y~aPE~~~~~~---------------------------~~~~~DIwS~G~~l~ellt~g~p~~~~  250 (311)
T d1t46a_         208 RLPVKWMAPESIFNCV---------------------------YTFESDVWSYGIFLWELFSLGSSPYPG  250 (311)
T ss_dssp             EECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             ccChHHcCHHHhcCCC---------------------------CCCcccccchHHHHHHHHhCCCCCCCC
Confidence            4677899999987654                           6678999999999999998 5666654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.04  E-value=0.01  Score=52.81  Aligned_cols=42  Identities=17%  Similarity=0.124  Sum_probs=33.8

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc-ccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE-ELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~  227 (400)
                      .++..|+|||.+.+..                           |....|+||+|+++.|++++. ++|..
T Consensus       203 ~~~~~y~aPE~~~~~~---------------------------~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         203 AIPIRWMPPESIFYNR---------------------------YTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             CBCGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CcCcCcCCHHHHccCC---------------------------CChhhhhccchhhHHHHHccCCCCCCC
Confidence            3567799999988765                           567889999999999999985 45544

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.56  E-value=0.0099  Score=52.58  Aligned_cols=39  Identities=13%  Similarity=0.137  Sum_probs=32.0

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELW  225 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  225 (400)
                      ++..|+|||.+.+..                           +....|+|++|+++.+++++..++
T Consensus       176 gt~~y~aPE~~~~~~---------------------------~~~ksDI~S~Giil~el~t~~~p~  214 (285)
T d1fmka3         176 FPIKWTAPEAALYGR---------------------------FTIKSDVWSFGILLTELTTKGRVP  214 (285)
T ss_dssp             CCGGGSCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ccccccChHHHhCCC---------------------------CCcHHhhhcchHHHHHHHhCCCCC
Confidence            577899999987765                           556789999999999999965443

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.14  E-value=0.013  Score=52.54  Aligned_cols=86  Identities=12%  Similarity=0.066  Sum_probs=53.3

Q ss_pred             HHHHHHHh----CCeecCCCCCCceEecCCCceEEeccchhhhhhhccccchhhccccccccccccceeeehhhccCCCC
Q psy9736         100 QALEFLHS----NQVIHRDIKSDNILLGLDGSVKLSKWNRFIATKLYIEISKVIIYCWDWTAVASGTVYTAIESSTGMEP  175 (400)
Q Consensus       100 ~~l~~lH~----~~ivH~dikp~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~  175 (400)
                      .....+|.    .+|.-.  ...++.+.+-|..+....+  ..   ..... .       ....+|..|+|||.+.+.. 
T Consensus       147 H~~~iiHrDLK~~NILl~--~~~~~kL~DFG~~~~~~~~--~~---~~~~~-~-------~~~~gt~~y~aPE~~~~~~-  210 (311)
T d1r0pa_         147 ASKKFVHRDLAARNCMLD--EKFTVKVADFGLARDMYDK--EF---DSVHN-K-------TGAKLPVKWMALESLQTQK-  210 (311)
T ss_dssp             HHTTCCCSCCSGGGEEEC--TTCCEEECSSGGGCCTTTT--TC---CCTTC-T-------TCSSCCGGGSCHHHHHHCC-
T ss_pred             cccCcccCCccHHhEeEC--CCCCEEEecccchhhcccc--cc---cccee-c-------ccccccccccChHHHhcCC-
Confidence            34445663    255432  2346777777766654433  11   00011 0       1235788899999987654 


Q ss_pred             chHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         176 KKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                                                +....|+|++|+++.|++++..+|..
T Consensus       211 --------------------------~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         211 --------------------------FTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             --------------------------CCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             --------------------------CCChhHhhhhHHHHHHHHHCCCCCCC
Confidence                                      56778999999999999997766543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.94  E-value=0.014  Score=52.98  Aligned_cols=42  Identities=17%  Similarity=0.344  Sum_probs=35.2

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeeccccccccccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (400)
                      .+|..|+|||.+.+..                           +....|+|++|+++.++++|..+|..
T Consensus       190 ~gt~~y~aPE~~~~~~---------------------------~~~~~DiwSlG~il~el~~g~~pF~~  231 (362)
T d1q8ya_         190 IQTREYRSPEVLLGAP---------------------------WGCGADIWSTACLIFELITGDFLFEP  231 (362)
T ss_dssp             CSCGGGCCHHHHHTCC---------------------------CCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             cccccccChhhccccC---------------------------CCccccccchHHHHHHHHHCCCCCCC
Confidence            3677899999988765                           56789999999999999999998865

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.39  E-value=0.013  Score=52.42  Aligned_cols=41  Identities=17%  Similarity=0.136  Sum_probs=33.1

Q ss_pred             ccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc-ccccc
Q psy9736         160 SGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE-ELWYT  227 (400)
Q Consensus       160 ~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~  227 (400)
                      +|..|+|||.+.+.                           .+....|+||+|+++.++++|. ++|..
T Consensus       188 gt~~y~aPE~l~~~---------------------------~~~~~sDvwSfGvil~ell~~~~~p~~~  229 (309)
T d1fvra_         188 LPVRWMAIESLNYS---------------------------VYTTNSDVWSYGVLLWEIVSLGGTPYCG  229 (309)
T ss_dssp             CCTTTCCHHHHHHC---------------------------EECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cCCcccchHHhccC---------------------------CCCccceeehhHHHHHHHHhcCCCCCCC
Confidence            56779999998765                           4667899999999999999975 45544

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.66  E-value=0.025  Score=49.53  Aligned_cols=40  Identities=10%  Similarity=0.175  Sum_probs=33.2

Q ss_pred             cceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccccccc
Q psy9736         161 GTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGEELWY  226 (400)
Q Consensus       161 ~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  226 (400)
                      +..|++||.+.+..                          .+....|+|++|+++.++++|..+|.
T Consensus       164 ~~~~~~pe~~~~~~--------------------------~~~~~~DiwSlG~il~ell~g~~p~~  203 (292)
T d1unla_         164 TLWYRPPDVLFGAK--------------------------LYSTSIDMWSAGCIFAELANAGRPLF  203 (292)
T ss_dssp             CGGGCCHHHHTTCS--------------------------CCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred             ccchhhhhHhccCC--------------------------CCCchhhccccchHHHHHhhCCCCCC
Confidence            45588999988766                          45678899999999999999987753

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.88  E-value=0.43  Score=43.37  Aligned_cols=53  Identities=13%  Similarity=0.140  Sum_probs=31.3

Q ss_pred             EEEEeccccccCcchHHHHHHHHHHHHhCC-CCCcccccceeEeCCEEEEEEeccCCCCh
Q psy9736          19 SKILSNPITLAQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGEELWVVMEYLPGGSL   77 (400)
Q Consensus        19 ~~va~K~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L   77 (400)
                      .+|+++..- ... ......+|..+++.+. +.-..++++++.+    .+|+||++|.++
T Consensus        75 ~~vllRi~g-~~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l  128 (395)
T d1nw1a_          75 NKVLLRVYF-NPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL  128 (395)
T ss_dssp             SEEEEEEEC-SCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             CcEEEEecC-Ccc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccC
Confidence            445555543 222 2233467998988874 3334467766642    578999987544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.12  E-value=0.089  Score=46.42  Aligned_cols=27  Identities=30%  Similarity=0.338  Sum_probs=24.9

Q ss_pred             CCeecCCCCCCceEecCCCceEEeccc
Q psy9736         108 NQVIHRDIKSDNILLGLDGSVKLSKWN  134 (400)
Q Consensus       108 ~~ivH~dikp~nil~~~~~~~~l~dfg  134 (400)
                      .|+||+|+.++|++++.+....+.||+
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~  209 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFY  209 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCT
T ss_pred             cccccCCcchhhhhcccccceeEeccc
Confidence            389999999999999988888999999

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.48  E-value=0.034  Score=49.38  Aligned_cols=42  Identities=10%  Similarity=0.010  Sum_probs=33.6

Q ss_pred             cccceeeehhhccCCCCchHHHHHHHHHHhhcCCCchhhhhhhhccccccceeeeecccccccc-ccccc
Q psy9736         159 ASGTVYTAIESSTGMEPKKELIINEILVMRENKHPNIVNYLDSYLVGEELWNIVNYLDSYLVGE-ELWYT  227 (400)
Q Consensus       159 ~~~~~y~ape~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~  227 (400)
                      .++..|+|||.+.+..                           +....|+|++|+++.|++++. ++|..
T Consensus       196 ~~t~~y~aPe~l~~~~---------------------------~~~~~Dv~S~G~il~El~t~~~~p~~~  238 (308)
T d1p4oa_         196 LLPVRWMSPESLKDGV---------------------------FTTYSDVWSFGVVLWEIATLAEQPYQG  238 (308)
T ss_dssp             EECGGGCCHHHHHHCC---------------------------CCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             ecccccCCHHHHccCC---------------------------CCcccccccHHHHHHHHHhCCCCCCCC
Confidence            4577899999987765                           556789999999999999985 55543