BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9738
(133 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE RK YGPKV + + + ++MIEGEPP + NENPLR
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
ALYLIATN PE++ EKLS IF+DFL++CLE +VE R SA LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 122 bits (307), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE RK YGPKV + + + ++MIEGEPP + NENPLR
Sbjct: 184 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 224
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
ALYLIATN PE++ EKLS IF+DFL++CLE +VE R SA L++H FLKIA+PL+SLT
Sbjct: 225 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLT 284
Query: 121 PLIMAAKEAAKGH 133
PLI AAKEA K +
Sbjct: 285 PLIAAAKEATKNN 297
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE RK YGPKV + + + ++MIEGEPP + NENPLR
Sbjct: 184 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 224
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
ALYLIATN PE++ EKLS IF+DFL++CLE +VE R SA L++H FLKIA+PL+SLT
Sbjct: 225 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLT 284
Query: 121 PLIMAAKEAAKGH 133
PLI AAKEA K +
Sbjct: 285 PLIAAAKEATKNN 297
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 122 bits (307), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE RK YGPKV + + + ++MIEGEPP + NENPLR
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
ALYLIATN PE++ EKLS IF+DFL++CL+ +VE R SA LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 122 bits (306), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE RK YGPKV + + + ++MIEGEPP + NENPLR
Sbjct: 183 MAPEV-VTRKAYGPKVDIWS--LGIMAIEMIEGEPPYL-NENPLR--------------- 223
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
ALYLIATN PE++ EKLS IF+DFL++CL+ +VE R SA LL+H FLKIA+PL+SLT
Sbjct: 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
Query: 121 PLIMAAKEAAKGH 133
PLI AAKEA K +
Sbjct: 284 PLIAAAKEATKNN 296
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 237 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 277
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 278 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 337
Query: 121 PLI 123
PL+
Sbjct: 338 PLM 340
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 194 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 234
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 235 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 294
Query: 121 PLI 123
PL+
Sbjct: 295 PLM 297
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 314 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 354
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 355 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 414
Query: 121 PLI 123
PL+
Sbjct: 415 PLM 417
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 183 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 223
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 224 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 283
Query: 121 PLI 123
PL+
Sbjct: 284 PLM 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 187 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 227
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 228 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 287
Query: 121 PLI 123
PL+
Sbjct: 288 PLM 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YGP+V + + + ++M++GEPP +NE PL+
Sbjct: 192 MAPEL-ISRLPYGPEVDIWS--LGIMVIEMVDGEPPY-FNEPPLK--------------- 232
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ +I N P +K K+S + FLD+ L + RA+A+ LLKHPFL A P AS+
Sbjct: 233 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIV 292
Query: 121 PLI 123
PL+
Sbjct: 293 PLM 295
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R YG +V + + + ++MI+GEPP +NE PL Q
Sbjct: 208 MAPEV-ISRLPYGTEVDIWS--LGIMVIEMIDGEPPY-FNEPPL---------------Q 248
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ I + P +K+ K+S + + FLD L E RA+A LL HPFLK+A P + +
Sbjct: 249 AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIV 308
Query: 121 PLI 123
PL+
Sbjct: 309 PLM 311
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Query: 23 VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
+ + ++M EG+PP + +P+R F+IP TN P ++ E S
Sbjct: 211 LGITAIEMAEGKPPYA-DIHPMRAIFMIP---------------TNPPPTFRKPELWSDN 254
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEA 129
F DF+ QCL + E RA+A+ LL+HPF++ A+ ++ L LI A +
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLINEAMDV 301
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
P LF ++ ALY IA N+ P ++ S+ F++F+D CL++ + R ++ +LLKH F+
Sbjct: 251 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
Query: 111 KIARPLASLTPLIMAAKEAAK 131
RP + LI K+A +
Sbjct: 310 LRERPPTVIMDLIQRTKDAVR 330
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
P LF ++ ALY IA N+ P ++ S+ F++F+D CL++ + R ++ +LLKH F+
Sbjct: 212 PPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
Query: 111 KIARPLASLTPLIMAAKEAAK 131
RP + LI K+A +
Sbjct: 271 LRERPPTVIMDLIQRTKDAVR 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQ 60
MAPE R Y +V + + + ++M++GEPP ++++P+ Q
Sbjct: 208 MAPEV-ISRSLYATEVDIWS--LGIMVIEMVDGEPPY-FSDSPV---------------Q 248
Query: 61 ALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLT 120
A+ + + P++K K+S + +DFL++ L + + RA+A LL HPFL L
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLV 308
Query: 121 PLI 123
PLI
Sbjct: 309 PLI 311
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 23 VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
+ + ++M EG PPL + +P+R AL+LI N P +K K K S+
Sbjct: 220 LGITAIEMAEGAPPLC-DMHPMR---------------ALFLIPRNPAPRLKSK-KWSKK 262
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQ F++ CL + R + L+KHPF++
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L IA ++ P + + + S F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 221 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 273
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L IA ++ P + + + S F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L IA ++ P + + + S F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L IA ++ P + + + S F+DFL +CLE+ V+ R + S LL+HPF+ +
Sbjct: 247 RVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 299
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 56 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
L+ + L IA + P + K S F+DFL L++ ETR SA+ LL+HPF+
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 276
Query: 116 LASLTPLIMAAK 127
+L L+ AK
Sbjct: 277 NKALRELVAEAK 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 56 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
L+ + L IA + P + K S F+DFL L++ ETR SA+ LL+HPF+
Sbjct: 225 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 284
Query: 116 LASLTPLIMAAK 127
+L L+ AK
Sbjct: 285 NKALRELVAEAK 296
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 20/113 (17%)
Query: 23 VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
+ + +++ +GEPP + +P+R FLIP N P + ++
Sbjct: 206 LGITAIELAKGEPPNS-DMHPMRVLFLIP---------------KNNPPTLVGD--FTKS 247
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFL-KIARPLASLTPLIMAAKE-AAKGH 133
F++F+D CL ++ R +A LLKH F+ K ++ + LT LI K A+GH
Sbjct: 248 FKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFKRWKAEGH 300
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
F F++QCL+ + R SAS LL H F K + AS
Sbjct: 310 FHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
F F++QCL+ + R SAS LL H F K + AS
Sbjct: 294 FHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 329
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 19/102 (18%)
Query: 23 VSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQI 82
+ + +++ +GEPP + +P+R FLIP N P ++ + S+
Sbjct: 202 LGITAIELAKGEPPNS-DLHPMRVLFLIP---------------KNSPPTLEGQH--SKP 243
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFL-KIARPLASLTPLI 123
F++F++ CL ++ R +A LLKH F+ + + + LT LI
Sbjct: 244 FKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELI 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLAS 118
+ L+LI N P ++ S+ ++F++ CL +E R +A LLKH F L+ A+ +
Sbjct: 211 KVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 268
Query: 119 LTPLI 123
LT LI
Sbjct: 269 LTELI 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLAS 118
+ L+LI N P ++ S+ ++F++ CL +E R +A LLKH F L+ A+ +
Sbjct: 226 KVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283
Query: 119 LTPLI 123
LT LI
Sbjct: 284 LTELI 288
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLAS 118
+ L+LI N P ++ S+ ++F++ CL +E R +A LLKH F L+ A+ +
Sbjct: 211 KVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 268
Query: 119 LTPLI 123
LT LI
Sbjct: 269 LTELI 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLAS 118
+ L+LI N P ++ S+ ++F++ CL +E R +A LLKH F L+ A+ +
Sbjct: 231 KVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 288
Query: 119 LTPLI 123
LT LI
Sbjct: 289 LTELI 293
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI----ARPLASLTPLIMA 125
+K S F DF QCL++ + R + L +HPF + +AS LI+A
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVASFVKLILA 316
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.3 bits (72), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI----ARPLASLTPLIMA 125
+K S F DF QCL++ + R + L++HPF + +AS LI+
Sbjct: 281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILG 333
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI----ARPLASLTPLIMA 125
+K S F DF QCL++ + R + L++HPF + +AS LI+
Sbjct: 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILG 289
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 82 IFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
+F DFL QCLE + R + L+HP+L+ P
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 82 IFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
+F DFL QCLE + R + L+HP+L+ P
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 82 IFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
+F DFL QCLE + R + L+HP+L+ P
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+D+ L +E ++R +AS L+HP+LK
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 246 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 282
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 242 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 278
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 243 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 279
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 262 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 298
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 242 FQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 290 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 290 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 29.3 bits (64), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 290 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
P+I EK+ QD L CL+ + + R S LL HP+++I
Sbjct: 262 PDIPEKD-----LQDVLKCCLKRDPKQRISIPELLAHPYVQI 298
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 235 FQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 64 LIATNKKPEIKEKE-------KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ A + PEIKE+E KLS++ D +CL + + R + LL H F ++
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 255 FQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 336 FQDFVNKCLIKNPAERADLKQLMVHAFIK 364
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 274 FQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 274 FQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 274 FQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 274 FQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.9 bits (63), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQDF+++CL + RA L+ H F+K
Sbjct: 301 FQDFVNKCLIKNPAERADLKQLMVHAFIK 329
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 60 QALYLIATNKKPE----IKEKE---KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L L N P +++KE K + F+ + CL+++ E R +A+ LL+H F +
Sbjct: 229 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
Query: 113 AR 114
A+
Sbjct: 289 AK 290
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
FQ+F+++CL + RA +L H F+K
Sbjct: 288 FQEFVNKCLIKNPAERADLKMLTNHTFIK 316
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 55 ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
IL+CR L E +E + +S+ ++F+ + L +E R SAS LKHP+L
Sbjct: 300 ILACRWDL---------EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 60 QALYLIATNKKPE----IKEKE---KLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKI 112
+ L L N P +++KE K + F+ + CL+++ E R +A+ LL+H F +
Sbjct: 234 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293
Query: 113 AR 114
A+
Sbjct: 294 AK 295
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 75 EKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
E+ + S F +F++ CL ++ R LLKHPF+
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLK----IARPLASLTPLIMAAKEAAK 131
S FQ F+ CL ++ R + LL+H F+K + +AS +MA E+ +
Sbjct: 256 FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPR 312
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
F DFL LE E RASA L+HP+L
Sbjct: 360 FTDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|3QVX|A Chain A, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Fulgidus Mutant K367a
Length = 392
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 87 LDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
++ ++E+ + ASAS+L + LK+ P A+ TP
Sbjct: 167 FERMIDEDRKEYASASMLYAYAALKLGLPYANFTP 201
>pdb|3QVW|A Chain A, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Fulgidus Mutant K278a
Length = 392
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 87 LDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
++ ++E+ + ASAS+L + LK+ P A+ TP
Sbjct: 167 FERMIDEDRKEYASASMLYAYAALKLGLPYANFTP 201
>pdb|3QW2|A Chain A, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Mutant N255a
pdb|3QW2|B Chain B, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Mutant N255a
pdb|3QW2|C Chain C, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Mutant N255a
pdb|3QW2|D Chain D, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Mutant N255a
Length = 392
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 87 LDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
++ ++E+ + ASAS+L + LK+ P A+ TP
Sbjct: 167 FERMIDEDRKEYASASMLYAYAALKLGLPYANFTP 201
>pdb|1U1I|A Chain A, Myo-Inositol Phosphate Synthase Mips From A. Fulgidus
pdb|1U1I|B Chain B, Myo-Inositol Phosphate Synthase Mips From A. Fulgidus
pdb|1U1I|C Chain C, Myo-Inositol Phosphate Synthase Mips From A. Fulgidus
pdb|1U1I|D Chain D, Myo-Inositol Phosphate Synthase Mips From A. Fulgidus
pdb|3QVS|A Chain A, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Fulgidus Wild Type
pdb|3QVT|A Chain A, L-Myo-Inositol 1-Phosphate Synthase From Archaeoglobus
Fulgidus Wild- Type With The Intermediate 5-Keto
1-Phospho Glucose
Length = 392
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 87 LDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
++ ++E+ + ASAS+L + LK+ P A+ TP
Sbjct: 167 FERMIDEDRKEYASASMLYAYAALKLGLPYANFTP 201
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKI 112
D LD+ L+ R SA+ LKHPF+ I
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFVSI 334
>pdb|2J04|A Chain A, The Tau60-Tau91 Subcomplex Of Yeast Transcription Factor
Iiic
pdb|2J04|C Chain C, The Tau60-Tau91 Subcomplex Of Yeast Transcription Factor
Iiic
Length = 588
Score = 26.9 bits (58), Expect = 3.5, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 55 ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
ILS +ALY A NKK E+ L+ + + L+ E + +LL+K+ FL+
Sbjct: 451 ILSFLEALYEYAINKKSELTNSFDLACVLS--IAAILKREAPIY-NGTLLMKNSFLEETF 507
Query: 115 PLASLT 120
L S T
Sbjct: 508 NLESFT 513
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D L++ LE +V+ R +A+ L HPF +
Sbjct: 302 DLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D L++ LE +V+ R +A+ L HPF +
Sbjct: 284 DLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
PEI E +S + F+ +C E + + RA A+ LL FLK++
Sbjct: 245 PEIPES--MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
F DFL LE E RA+A+ L+HP+L
Sbjct: 352 FTDFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 26.2 bits (56), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
F DFL LE E RA+A+ L+HP+L
Sbjct: 368 FTDFLLPMLELIPEKRATAAECLRHPWLN 396
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,183,067
Number of Sequences: 62578
Number of extensions: 155247
Number of successful extensions: 653
Number of sequences better than 100.0: 89
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 564
Number of HSP's gapped (non-prelim): 89
length of query: 133
length of database: 14,973,337
effective HSP length: 88
effective length of query: 45
effective length of database: 9,466,473
effective search space: 425991285
effective search space used: 425991285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)