RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9738
(133 letters)
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 122 bits (309), Expect = 2e-35
Identities = 77/136 (56%), Positives = 89/136 (65%), Gaps = 25/136 (18%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
MAPE RK YGPKV W S MA ++MIEGEPP NENPLR
Sbjct: 183 MAPEV-VTRKAYGPKVDI---W-SLGIMA-IEMIEGEPPY-LNENPLR------------ 223
Query: 58 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
ALYLIATN PE++ EKLS IF+DFL++CLE +VE R SA LL+H FLKIA+PL+
Sbjct: 224 ---ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLS 280
Query: 118 SLTPLIMAAKEAAKGH 133
SLTPLI AAKEA K +
Sbjct: 281 SLTPLIAAAKEATKNN 296
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 116 bits (292), Expect = 8e-33
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 25/133 (18%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
MAPE R Y +V W S M ++M++GEPP ++++P++
Sbjct: 208 MAPEV-ISRSLYATEVDI---W-SLGIMV-IEMVDGEPPY-FSDSPVQ------------ 248
Query: 58 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
A+ + + P++K K+S + +DFL++ L + + RA+A LL HPFL
Sbjct: 249 ---AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPE 305
Query: 118 SLTPLIMAAKEAA 130
L PLI ++
Sbjct: 306 CLVPLIQLYRKQT 318
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 111 bits (279), Expect = 6e-31
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 25/134 (18%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
MAPE Y W S A ++M EG+PP + +P+R
Sbjct: 192 MAPEV-IQEIGYNCVADI---W-SLGITA-IEMAEGKPPY-ADIHPMR------------ 232
Query: 58 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLA 117
A+++I TN P ++ E S F DF+ QCL + E RA+A+ LL+HPF++ A+ ++
Sbjct: 233 ---AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
Query: 118 SLTPLIMAAKEAAK 131
L LI A +
Sbjct: 290 ILRDLINEAMDVKL 303
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 106 bits (266), Expect = 4e-29
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 28/136 (20%)
Query: 1 MAPE----GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYL 53
MAPE Y K W S ++M + EPP NP+R
Sbjct: 184 MAPEVVMCETMKDTPYDYKADI---W-SLGITL-IEMAQIEPPH-HELNPMR-------- 229
Query: 54 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
L IA + P + K S F+DFL L++ ETR SA+ LL+HPF+
Sbjct: 230 -------VLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282
Query: 114 RPLASLTPLIMAAKEA 129
+L L+ AK
Sbjct: 283 TSNKALRELVAEAKAE 298
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 107 bits (268), Expect = 4e-29
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 27/136 (19%)
Query: 1 MAPE--GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
MAPE QY KV W S +++ E +PPL +N N +
Sbjct: 217 MAPEVILAMDEGQYDGKVDV---W-SLGITC-IELAERKPPL-FNMNAMS---------- 260
Query: 56 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
ALY IA N+ P ++ S+ F++F+D CL++ + R ++ +LLKH F+ RP
Sbjct: 261 -----ALYHIAQNESPALQSG-HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314
Query: 116 LASLTPLIMAAKEAAK 131
+ LI K+A +
Sbjct: 315 PTVIMDLIQRTKDAVR 330
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 88.6 bits (220), Expect = 3e-22
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 1 MAPE----GGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYL 53
MAPE + Y K W S A +M EG PPL + +P+R
Sbjct: 196 MAPEVIACDENPDATYDFKSDL---W-SLGITAI-EMAEGAPPL-CDMHPMR-------- 241
Query: 54 FILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
AL+LI N P +K K K S+ FQ F++ CL + R + L+KHPF++
Sbjct: 242 -------ALFLIPRNPAPRLKSK-KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293
Query: 114 RPLASLTPLIMAAKEAAK 131
+ + + K
Sbjct: 294 PNERQVRIQLKDHIDRTK 311
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 85.8 bits (213), Expect = 2e-21
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 28/132 (21%)
Query: 1 MAPEGGHHRKQYGPKVGYFGHWVS---MAYLKMIEGEPPLIWNENPLRPHFLIPYLFILS 57
MAPE + Y K W S A ++ GEPP +P++
Sbjct: 186 MAPEV-IKQSAYDSKADI---W-SLGITAI-ELARGEPPH-SELHPMK------------ 226
Query: 58 CRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL-KIARPL 116
L+LI N P ++ S+ ++F++ CL +E R +A LLKH F+ + A+
Sbjct: 227 ---VLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281
Query: 117 ASLTPLIMAAKE 128
+ LT LI K
Sbjct: 282 SYLTELIDRYKR 293
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 85.8 bits (213), Expect = 2e-21
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 29/129 (22%)
Query: 1 MAPEGGHHRKQYGPKVGY--FGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
MAPE + Y K FG + +++ G P P++
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFG----ITAIELATGAAPY-HKYPPMK------------- 234
Query: 59 RQALYLIATNKKPEIKE-------KEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
L L N P ++ +K + F+ + CL+++ E R +A+ LL+H F +
Sbjct: 235 --VLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
Query: 112 IARPLASLT 120
A+ L
Sbjct: 293 KAKNKEFLQ 301
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 84.0 bits (208), Expect = 1e-20
Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 16/104 (15%)
Query: 28 LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
L M+ G P IA+ P + + + +
Sbjct: 247 LHMLNGCHPW-TQYFRG---------------PLCLKIASEPPPIREIPPSCAPLTAQAI 290
Query: 88 DQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK 131
+ L +E RASA L + + +P KE
Sbjct: 291 QEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPRG 334
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 71.6 bits (176), Expect = 4e-16
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 1 MAPEGGHHRKQYGPKVG-Y-FGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
MAPE ++Y V Y FG M L+M E P ++E
Sbjct: 197 MAPEMY--EEKYDESVDVYAFG----MCMLEMATSEYP--YSE--------------CQN 234
Query: 59 RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
+Y T+ + ++ ++ C+ + + R S LL H F +
Sbjct: 235 AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 68.4 bits (167), Expect = 8e-15
Identities = 23/129 (17%), Positives = 34/129 (26%), Gaps = 31/129 (24%)
Query: 30 MIEGEPPLIWNENPLRPHFLIP----------------------------YLFILSCRQA 61
+ G P + + S +
Sbjct: 230 LANGHVPF-KDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTS 288
Query: 62 LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS--L 119
+ P S F F++QCL+ + R SAS LL H F K + AS L
Sbjct: 289 TPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 348
Query: 120 TPLIMAAKE 128
L+
Sbjct: 349 PELLRPVTP 357
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 66.2 bits (162), Expect = 4e-14
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 18/97 (18%)
Query: 28 LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKK-PEIKEKEKLSQIFQDF 86
++M G+PP P A++ + K PEI E +S + F
Sbjct: 216 IEMATGKPPFYELGEPQ---------------AAMFKVGMFKVHPEIPES--MSAEAKAF 258
Query: 87 LDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
+ +C E + + RA A+ LL FLK++ P +
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPKL 295
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 58.9 bits (143), Expect = 2e-11
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 15/88 (17%)
Query: 28 LKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFL 87
+++ G+ P + L + + P + S FQ F+
Sbjct: 220 VELATGQFPYKNCKTDFE---------------VLTKVLQEEPPLLPGHMGFSGDFQSFV 264
Query: 88 DQCLEEEVETRASASLLLKHPFLKIARP 115
CL ++ R + LL+H F+K
Sbjct: 265 KDCLTKDHRKRPKYNKLLEHSFIKRYET 292
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 57.3 bits (139), Expect = 6e-11
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 25/119 (21%)
Query: 1 MAPE---GGHHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
MAPE ++K Y K + G ++M +++ P P +
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLG--ITM--IELAILRFPYDSWGTPFQ---------- 221
Query: 56 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
L + P++ +K S F DF QCL++ + R + L++HPF +
Sbjct: 222 -----QLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 55.8 bits (135), Expect = 2e-10
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 25/119 (21%)
Query: 1 MAPE---GGHHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
MAPE ++K Y K + G ++M +++ P P + +
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLG--ITM--IELAILRFPYDSWGTPFQQLKQVV---- 271
Query: 56 LSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
+ +K S F DF QCL++ + R + L++HPF +
Sbjct: 272 ------------EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 55.8 bits (135), Expect = 2e-10
Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 1 MAPE---GGHHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFI 55
MAPE R+ Y + V G +++ ++ G P +
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLG--ITL--YELATGRFPYPKWNSVFD---------- 237
Query: 56 LSCRQALYLIATNKKPEIKEKEKL--SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIA 113
L + P++ E+ S F +F++ CL ++ R LLKHPF+ +
Sbjct: 238 -----QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292
Query: 114 R 114
Sbjct: 293 E 293
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 49.8 bits (119), Expect = 3e-08
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 68 NKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
N+ P S FQDF+++CL + RA L+ H F+K +
Sbjct: 286 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 48.1 bits (115), Expect = 1e-07
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 57 SCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIAR 114
+ I + P I + LSQ F + L + + E R SA L+KH L A
Sbjct: 232 RNGDQWHEIRQGRLPRIPQV--LSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 47.5 bits (113), Expect = 2e-07
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 1 MAPE--GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSC 58
+APE ++ V F Y+ + EG P
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYV-ISEGSHPF-GKSLQ--------------- 235
Query: 59 RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
RQA L+ + ++ I ++ +++ + + + R SA +LKHPF
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW 288
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 45.8 bits (109), Expect = 7e-07
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 51 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
P+ I++ L+ I + EI+ + + QD L CL+ + + R S LL HP++
Sbjct: 219 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
Query: 111 KIARP 115
+I
Sbjct: 278 QIQTH 282
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 45.6 bits (108), Expect = 8e-07
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 51 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
P+ I++ L+ I + EI+ + + QD L CL+ + + R S LL HP++
Sbjct: 266 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
Query: 111 KIARP 115
+I
Sbjct: 325 QIQTH 329
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 44.2 bits (105), Expect = 2e-06
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 51 PYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFL 110
P+ I++ L+ I + EI+ + + QD L CL+ + + R S LL HP++
Sbjct: 238 PFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 111 KI 112
+I
Sbjct: 297 QI 298
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 43.8 bits (104), Expect = 3e-06
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 64 LIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
L PE LS + L LE + + RA+A LL P L+
Sbjct: 264 LRQGYLPPEFTAG--LSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 38.9 bits (91), Expect = 2e-04
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 70 KPEIKEKEKLS----QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
+ + EK K S + DFL L+ + RA A L+ HP+LK + +
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 38.5 bits (90), Expect = 2e-04
Identities = 8/82 (9%), Positives = 24/82 (29%), Gaps = 9/82 (10%)
Query: 53 LFILSC-------RQALYLIATNKKPEIKEK--EKLSQIFQDFLDQCLEEEVETRASASL 103
F + R + + E + ++ + + ++ + R A
Sbjct: 221 FFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGART 280
Query: 104 LLKHPFLKIARPLASLTPLIMA 125
LL +L + + + +
Sbjct: 281 LLNSGWLPVKHQDEVIKEALKS 302
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 37.0 bits (86), Expect = 8e-04
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 69 KKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
+ E F+D + + L+ + +TR L+H F K
Sbjct: 335 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 36.1 bits (84), Expect = 0.001
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 83 FQDFLDQCLEEEVETRASASLLLKHPFLK 111
F DFL L+ + R S + LLKH FL+
Sbjct: 332 FCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 36.0 bits (83), Expect = 0.002
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 70 KPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
K E ++E F DFL LE E RA+A+ L+HP+L
Sbjct: 357 KYEWSQEEA--AGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 35.8 bits (83), Expect = 0.002
Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
+ I + P + S + + Q + R S + +L+ F+
Sbjct: 232 NLVLKIISGSFPPVSLH--YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 35.7 bits (83), Expect = 0.002
Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 64 LIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
+ I + + + L + L ++ E R + S +L+ + P
Sbjct: 227 FFTDLRDGIISDI--FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 35.5 bits (82), Expect = 0.002
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 59 RQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
R L +++ K +F DFL QCLE + R + L+HP+L+ P
Sbjct: 361 RGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.6 bits (79), Expect = 0.005
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 24/85 (28%)
Query: 36 PLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEE-- 93
PL + L L+P A + IA+ +++E+ F L + E
Sbjct: 8 PLTLSHGSLEHVLLVP--------TASFFIAS----QLQEQ------FNKILPEPTEGFA 49
Query: 94 -EVETRASASLLLKHPFLK-IARPL 116
+ E A L+ K FL ++ +
Sbjct: 50 ADDEPTTPAELVGK--FLGYVSSLV 72
Score = 26.6 bits (58), Expect = 3.1
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 21/71 (29%)
Query: 74 KEKEKLSQIFQDFLD-------QCLEEEVETRASASLLLKHPF-----LK--IARP---- 115
+E L Q + + + L E + T A + L+ P
Sbjct: 171 EELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDY 230
Query: 116 LASLT---PLI 123
L S+ PLI
Sbjct: 231 LLSIPISCPLI 241
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 34.6 bits (80), Expect = 0.006
Identities = 8/60 (13%), Positives = 19/60 (31%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 119
+L + S+ + ++ C+ + E R + + A +SL
Sbjct: 244 YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 34.2 bits (79), Expect = 0.008
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 73 IKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
+ ++ + D + + LE + R + LKHPF + +
Sbjct: 295 MLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 33.0 bits (76), Expect = 0.016
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 71 PEIKEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
PEIKE+E L + + D +CL + + R + LL H F +
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 33.1 bits (76), Expect = 0.016
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 7/95 (7%)
Query: 28 LKMIE---GEPP--LIWNENPLRPHFLIPYLFILSCRQALYLIATNK--KPEIKEKEKLS 80
L M+E G P +I + + ++ + Y+ K K + +
Sbjct: 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307
Query: 81 QIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP 115
D + + LE + R + + L HPF P
Sbjct: 308 VQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP 342
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 32.6 bits (75), Expect = 0.020
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
+ S + + + L + R S +L++P +
Sbjct: 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 32.7 bits (74), Expect = 0.026
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARP-LASLTPL 122
+ + + Q + L+ L E R ++ P + R L++ PL
Sbjct: 327 RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPL 376
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 31.8 bits (73), Expect = 0.052
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 69 KKPEIKEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
K P+ ++ E L F L CL + R + LL HP+ +
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 31.2 bits (71), Expect = 0.077
Identities = 3/40 (7%), Positives = 9/40 (22%)
Query: 80 SQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASL 119
+ L R A ++++ +
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGKT 292
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 30.8 bits (70), Expect = 0.090
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 62 LYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHP-FLKIARPLASLT 120
+A + I + + S L+ + + R LLL L+ P T
Sbjct: 255 SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTT 314
Query: 121 PLI 123
++
Sbjct: 315 QIL 317
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 30.7 bits (70), Expect = 0.12
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
DF+ L + E R +A + L H +L+ P ++ + H
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQDH 314
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 122
+D L + R +A LK P++ +AS
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHR 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 30.5 bits (69), Expect = 0.14
Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 21/117 (17%)
Query: 1 MAPE------GGHHRKQYGPKVGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLF 54
APE +++ + F Y+ + +G+ P ++
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI-LSKGKHPF-GDKY-------SRESN 249
Query: 55 ILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
I+ +L + + L D + Q ++ + R +A +L+HP
Sbjct: 250 IIRGIFSL------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW 300
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 30.2 bits (68), Expect = 0.17
Identities = 9/38 (23%), Positives = 17/38 (44%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 122
DF+ + L + TR + L+HP+L + +
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI 426
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 29.3 bits (66), Expect = 0.32
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIM 124
D + + L + + R + L+HP+L+ L+
Sbjct: 378 DLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS 417
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 28.9 bits (65), Expect = 0.42
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+ + L +E R + L+HP++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT 277
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 28.9 bits (64), Expect = 0.43
Identities = 4/33 (12%), Positives = 10/33 (30%)
Query: 79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
L + + + L + R ++ P
Sbjct: 325 LPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 28.8 bits (65), Expect = 0.45
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
DF+ + L ++ + R + L+HP++K +L+
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKA 288
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 28.8 bits (65), Expect = 0.47
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+ + L +E R + L+HP++
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWIT 277
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.1 bits (64), Expect = 0.54
Identities = 18/149 (12%), Positives = 32/149 (21%), Gaps = 67/149 (44%)
Query: 7 HHRKQYGPK--VGYFGHWVSMAYLKMIEGEPPLIWNENPLRPHFLIPYLFILSCRQALYL 64
HH P ++ + P + NP L +
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCR----PQDLPREVLTTNPR----------------RLSI 332
Query: 65 IATNKKPEIK--------EKEKLSQIFQDFLD---------------------------- 88
IA + + + +KL+ I + L+
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392
Query: 89 ---------QCLEEEVETRASASLLLKHP 108
+ V SL+ K P
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Score = 27.1 bits (59), Expect = 2.4
Identities = 30/162 (18%), Positives = 49/162 (30%), Gaps = 64/162 (39%)
Query: 19 FG-HWVSMAY-------LKMIEG-----EPPLIWNEN-----PLRPHFLI---------- 50
F W+++ L+M++ +P + LR H +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241
Query: 51 PY---LFIL--------------SCRQALYLIATNKKP--EIKEKEKLSQIFQDFLDQCL 91
PY L +L SC+ L+ T K + + I D L
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCK---ILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 92 EEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
+ E + SLLLK +L L P +E +
Sbjct: 299 TPD-EVK---SLLLK--YLDC--RPQDL-P-----REVLTTN 326
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 28.7 bits (64), Expect = 0.62
Identities = 3/35 (8%), Positives = 11/35 (31%)
Query: 77 EKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
+ + L R A+ ++++ +
Sbjct: 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 28.3 bits (64), Expect = 0.63
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+ LE++ R + L HP++
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWID 266
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 28.4 bits (64), Expect = 0.64
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 122
D + + L + R +A+L+L+HP++ L
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIV-HWDQLPQYQL 292
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 28.5 bits (64), Expect = 0.69
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
+F+ + L +E R SAS LKHP+L
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLS 347
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 28.4 bits (64), Expect = 0.76
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKE 128
D + + L + R + L HP+LK A L ++
Sbjct: 265 DLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQ 308
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 28.4 bits (64), Expect = 0.76
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
+D L + R +A LK P++ +AS
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVAS 296
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 28.0 bits (63), Expect = 0.81
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D +++ L R +A+ LKHP++
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWIS 272
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 28.1 bits (63), Expect = 0.81
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+ L++E R + L+HP+LK
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWLK 309
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 28.0 bits (63), Expect = 0.86
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+D+ L +E ++R +AS L+HP+LK
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLK 262
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 28.1 bits (62), Expect = 0.89
Identities = 8/45 (17%), Positives = 16/45 (35%)
Query: 74 KEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLAS 118
+ + + Q + L+ L E R ++ P + R S
Sbjct: 331 RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 28.0 bits (63), Expect = 0.92
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D + + L + + R +A L HPF +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 28.1 bits (63), Expect = 0.94
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D + + L+ + E R +A L+HPF +
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFFE 364
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 27.9 bits (63), Expect = 1.0
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
DF+ + L ++ + R + + L+H ++K
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 28.0 bits (63), Expect = 1.0
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASL-TPLIM 124
D + + L + + R SA+ +L+HP+++ P +L TP+++
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMVL 314
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 27.9 bits (62), Expect = 1.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 84 QDFLDQCLEEEVETRASASLLLKHPFLK 111
+D L L V+ R A L+HP++
Sbjct: 308 RDLLSNLLNRNVDERFDAMRALQHPWIS 335
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium; NMR {Clostridium perfringens} PDB:
2kyb_A
Length = 76
Score = 26.5 bits (59), Expect = 1.1
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 6/35 (17%)
Query: 15 KVGYFGH--WVSMAYLKMIEGEPPLIWNENPLRPH 47
K+ Y G +V+ Y+K I+ E E+ H
Sbjct: 46 KIEYKGSHGYVAKEYIKDIKDEV----LEHHHHHH 76
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 27.6 bits (62), Expect = 1.1
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAKGH 133
D + L + R S L + +L+ L+S PL+ + G
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS-NPLMTPDILGSSGA 296
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 27.7 bits (62), Expect = 1.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 84 QDFLDQCLEEEVETRASASLLLKHPFLK 111
+D + Q L+ + + R SA L+HP++K
Sbjct: 269 KDLIKQMLQFDSQRRISAQQALEHPWIK 296
>2prv_A Uncharacterized protein YOBK; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE; 1.30A {Bacillus subtilis} SCOP:
d.369.1.1
Length = 153
Score = 27.3 bits (60), Expect = 1.3
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 13/78 (16%)
Query: 32 EGEPPLIWNENPLRPHFLIP--YLFILSCRQALYLIATNK-----------KPEIKEKEK 78
++ N + H+ + + I Y + TNK I ++
Sbjct: 66 FDHASVVNRTNEYKEHYGLTDGLVVIEDVDYFAYCLDTNKMKDGECPVVEWDRVIGYQDT 125
Query: 79 LSQIFQDFLDQCLEEEVE 96
++ F +F ++E +
Sbjct: 126 VADSFIEFFYNKIQEAKD 143
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 27.3 bits (61), Expect = 1.4
Identities = 5/27 (18%), Positives = 14/27 (51%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D + + + + + R + L+HP++
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWVT 310
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 27.4 bits (61), Expect = 1.5
Identities = 5/28 (17%), Positives = 12/28 (42%)
Query: 84 QDFLDQCLEEEVETRASASLLLKHPFLK 111
++ + L + R +A L ++K
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIK 306
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 27.4 bits (61), Expect = 1.7
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 84 QDFLDQCLEEEVETRASASLLLKHPFLK 111
+D + + L R SA L H +++
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDHEWIQ 286
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 27.3 bits (61), Expect = 1.7
Identities = 7/38 (18%), Positives = 16/38 (42%)
Query: 84 QDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
+D + + L R +A+ L+HP+++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS 291
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 26.8 bits (60), Expect = 1.9
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D + + L R +A+ L+HP+++
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 27.0 bits (60), Expect = 2.2
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 80 SQIFQDFLDQCLEEEVETRASASLLLKHPF-LKIARPLASLTPL 122
+F + L+ E R S + ++ + AR + +P+
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPI 318
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 26.9 bits (60), Expect = 2.4
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
+ + L+Q+ DFL+Q L R +A L HP++
Sbjct: 266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 26.6 bits (59), Expect = 2.4
Identities = 18/136 (13%), Positives = 31/136 (22%), Gaps = 41/136 (30%)
Query: 1 MAPE-------GGHHRKQYGPKV--------------GY-------FGHWVSMAYLKMIE 32
+ P+ H+K+YG V G K+I
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241
Query: 33 GEPPLIWNENPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLE 92
G+P + + I + + +L L + L LE
Sbjct: 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSL-------------SRGLQVLLTPVLANILE 288
Query: 93 EEVETRASASLLLKHP 108
+ E
Sbjct: 289 ADQEKCWGFDQFFAET 304
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 26.5 bits (59), Expect = 2.7
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTP 121
+S + +CL + +R S +L P+++ L P
Sbjct: 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNP 298
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 26.5 bits (59), Expect = 2.7
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLIMAAKEAAK 131
D + + L + + R + L+HP+L+ L+ E+
Sbjct: 253 DLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTA 299
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 26.4 bits (59), Expect = 3.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D L Q L ++ E R SA+ +L H + K
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWFK 283
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 26.5 bits (59), Expect = 3.1
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
EK+ + I + L++ L + E R +A L HP+ +
Sbjct: 268 LEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 26.5 bits (59), Expect = 3.1
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
++ +Q+F D L++ LE +V+ R +A+ L HPF +
Sbjct: 266 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 26.4 bits (59), Expect = 3.3
Identities = 6/39 (15%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
+ + L + + R ++ L+H + + +S L+
Sbjct: 240 SLIRRLLTKSPKQRITSLQALEHEWFEKQLS-SSPRNLL 277
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 26.5 bits (59), Expect = 3.5
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
K K +++F D LD+ L R L HP+L+
Sbjct: 274 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully
methylated CG, SUVH5, 5MC binding protein, fully
methylated CG duplex DNA; HET: DNA 5CM; 2.20A
{Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X*
Length = 167
Score = 25.8 bits (56), Expect = 3.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 14 PKVGYFGHWVSMAYLKMIEGEPPLIWNE 41
+ G G V L+ I G+P L W E
Sbjct: 138 EETGSHGKLVFKFKLRRIPGQPELPWKE 165
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 26.1 bits (58), Expect = 3.9
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
K + +F D L++ L + + R +A+ L H +
Sbjct: 272 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 316
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling,
linkage specificity, deubiquitinating enzyme, Lys63-
linked, anti-oncogene; 2.8A {Homo sapiens}
Length = 374
Score = 26.3 bits (57), Expect = 4.0
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 14/73 (19%)
Query: 42 NPLRPHFLIPYLFILSCRQALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASA 101
NPLR + + I+ R+ L +++ + +D EE
Sbjct: 64 NPLRIYGYVCATKIMKLRKIL--------EKVEAASGFTSEEKD------PEEFLNILFH 109
Query: 102 SLLLKHPFLKIAR 114
+L P LKI
Sbjct: 110 HILRVEPLLKIRS 122
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 26.3 bits (58), Expect = 4.1
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
+E L++ F L + L R + + L HPF K
Sbjct: 357 REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 26.2 bits (58), Expect = 4.1
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
++ L Q + + L+ L+ R + L HP+LK
Sbjct: 322 RKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 25.8 bits (57), Expect = 5.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLK 111
D LD+ L+ R SA+ LKHPF+
Sbjct: 307 DLLDKLLQFNPNKRISANDALKHPFVS 333
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 25.7 bits (57), Expect = 5.0
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
L ++F D L + L + R +A L+HP+L+
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 25.7 bits (57), Expect = 6.2
Identities = 8/52 (15%), Positives = 25/52 (48%)
Query: 60 QALYLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASLLLKHPFLK 111
L+ ++ E ++ +++ +D + + L++ E+R + HP++
Sbjct: 246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>2icg_A LIN2918 protein; hypothetical protein, structural genomics, PSI-
protein structure initiative, joint center for
structural G JCSG; 1.65A {Listeria innocua} SCOP:
d.369.1.1
Length = 160
Score = 25.4 bits (55), Expect = 6.5
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 71 PEIKEKEKLSQIFQDFLDQCLEEEVE 96
+ EK+ ++ F +FL + +E +
Sbjct: 132 KDNTEKKVVANSFGEFLLEEIELSLT 157
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 25.3 bits (56), Expect = 6.5
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 85 DFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPL 122
+ L+ E R + + + HP++ TPL
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHPWIM-QSTKVPQTPL 271
>3l34_A Sensor protein; two-component sensor,structural genomics, PSI-2,
protein structure initiative, midwest center for
structural genomics; 1.70A {Pseudomonas aeruginosa} PDB:
3kkb_A 3n24_A
Length = 130
Score = 25.1 bits (54), Expect = 6.7
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 56 LSCRQAL---YLIATNKKPEIKEKEKLSQIFQDFLDQCLEEEVETRASASL 103
RQ L +I + P+ + E+ F+ L+Q V++ A+L
Sbjct: 19 QQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAAL 69
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 25.4 bits (56), Expect = 7.5
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 9/51 (17%)
Query: 69 KKPEIKEKEKLSQIFQ--------DFLDQCLEEEVETRASASLLLKHPFLK 111
K P+IK +++F+ + LE R + H F
Sbjct: 292 KFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 25.3 bits (56), Expect = 7.6
Identities = 7/45 (15%), Positives = 17/45 (37%)
Query: 79 LSQIFQDFLDQCLEEEVETRASASLLLKHPFLKIARPLASLTPLI 123
+S ++ L + L R + ++K ++ L P +
Sbjct: 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFV 281
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 25.3 bits (56), Expect = 8.3
Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 7/45 (15%)
Query: 74 KEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
+ + D + + LE + R S L+HP+ +
Sbjct: 277 VPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 25.2 bits (56), Expect = 9.2
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 7/51 (13%)
Query: 68 NKKPEIKEKEKLSQIFQ-------DFLDQCLEEEVETRASASLLLKHPFLK 111
P L + D L L+ R SA L+HP+
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,090,277
Number of extensions: 110705
Number of successful extensions: 383
Number of sequences better than 10.0: 1
Number of HSP's gapped: 356
Number of HSP's successfully gapped: 132
Length of query: 133
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 50
Effective length of database: 4,384,350
Effective search space: 219217500
Effective search space used: 219217500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (23.9 bits)