RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9741
         (199 letters)



>d1xtea_ d.189.1.1 (A:) Serine/threonine-protein kinase Sgk3, Cisk
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 116

 Score = 69.3 bits (169), Expect = 3e-16
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 37  NSKINTHITSYEIKDKIALYKITVQVGEVCWSLSHRYSDFVELNDKLVKDHS-LNKDLLP 95
           +  I +     E K +  +YK+ V VG   W +  RY++F +L + L K    +   +  
Sbjct: 6   SVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNSLKKQFPAMALKIPA 65

Query: 96  PKKVLRNLDPTFLEKRKTDLEIYLQNVVNFLEKSLPRCLIDFLHL 140
            +    N DP F+++R+  L  ++QN+V + E      +  FL +
Sbjct: 66  KRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQM 110


>d1h6ha_ d.189.1.1 (A:) p40phox NADPH oxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 143

 Score = 63.2 bits (153), Expect = 1e-13
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 36  NNSKINTHITSYEIK---DKIALYKITVQV-GEVCWSLSHRYSDFVELNDKLVKDHSLNK 91
           ++  I+ +I   E K       ++ I V+  G   + +  RY  F  L  KL +    + 
Sbjct: 17  DDVAISANIADIEEKRGFTSHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEERFGPDS 76

Query: 92  DLL--------PPKKVLRNLDPTFLEKRKTDLEIYLQNVVNFLEK-SLPRCLIDFLHLVK 142
                       P KV   +     E R   L  Y++++++      +   +  F +   
Sbjct: 77  KSSALACTLPTLPAKVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSP 136

Query: 143 YDIN 146
           YD  
Sbjct: 137 YDSE 140


>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 117

 Score = 62.3 bits (151), Expect = 1e-13
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 15/113 (13%)

Query: 39  KINTHITSYEIKDKIALYKITVQVGEVCWSLSHRYSDFVELNDKLVKDH-SLNKDLLPPK 97
           K+   +   +I  K  LY ++     +      RYS+F +L  +L +D  S      P K
Sbjct: 5   KLRIKVDDVKINPKYVLYGVSTPNKRLY----KRYSEFWKLKTRLERDVGSTIPYDFPEK 60

Query: 98  KVL-------RNLDPTFLEKRKTDLEIYLQNVVNFLEKSLPR---CLIDFLHL 140
             +       R  DP  +++R+  LE +L  + N    S  R      DFL L
Sbjct: 61  PGVLDRRWQRRYDDPEMIDERRIGLERFLNELYNDRFDSRWRDTKIAQDFLQL 113


>d1kq6a_ d.189.1.1 (A:) p47phox NADPH oxidase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 140

 Score = 55.1 bits (132), Expect = 1e-10
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 13/118 (11%)

Query: 43  HITSYEIK---DKIALYKITVQVGE-VCWSLSHRYSDFVELNDKLVKDHSLNKDLLPPKK 98
            +  +E +    +  +Y   V+  +     +  R+++  E +  L +   +    + P+ 
Sbjct: 9   ALLGFEKRFVPSQHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPEN 68

Query: 99  --------VLRNLDPTFLEKRKTDLEIYLQNVVNFLEK-SLPRCLIDFLHLVKYDINI 147
                             E R+  L  Y   +++   K S    L+DF  +   D+ +
Sbjct: 69  RIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPDDLKL 126


>d1ocsa_ d.189.1.1 (A:) Sorting nexin grd19 {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 132

 Score = 50.1 bits (119), Expect = 7e-09
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 13/96 (13%)

Query: 56  YKITVQV-----GEVCWSLSHRYSDFVELNDKLVKDHSLNKDLLPP-------KKVLRNL 103
           Y+I  +       +    +  RYSDF      L+K+ S+                +    
Sbjct: 31  YEIICRTNLPSFHKRVSKVRRRYSDFEFFRKCLIKEISMLNHPKVMVPHLPGKILLSNRF 90

Query: 104 DPTFLEKRKTDLEIYLQNVVNFLE-KSLPRCLIDFL 138
               +E+R+  L  ++Q+V      +S  + L+ F+
Sbjct: 91  SNEVIEERRQGLNTWMQSVAGHPLLQSGSKVLVRFI 126


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.138    0.413 

Gapped
Lambda     K      H
   0.267   0.0576    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 724,755
Number of extensions: 33010
Number of successful extensions: 59
Number of sequences better than 10.0: 1
Number of HSP's gapped: 53
Number of HSP's successfully gapped: 8
Length of query: 199
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 118
Effective length of database: 1,295,466
Effective search space: 152864988
Effective search space used: 152864988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.4 bits)