Query psy9748
Match_columns 1359
No_of_seqs 840 out of 4724
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 18:33:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 5.5E-73 1.9E-77 707.7 18.1 544 113-968 51-624 (632)
2 3nd0_A SLL0855 protein; CLC fa 100.0 1.9E-52 6.6E-57 503.7 22.0 393 91-801 29-444 (466)
3 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 1.1E-51 3.9E-56 495.3 24.6 395 91-800 18-436 (446)
4 1ots_A Voltage-gated CLC-type 100.0 1.1E-51 3.9E-56 497.9 24.0 368 117-801 82-452 (465)
5 3org_A CMCLC; transporter, tra 99.9 4.7E-25 1.6E-29 275.7 4.6 127 1202-1357 332-465 (632)
6 1ots_A Voltage-gated CLC-type 99.8 2.1E-21 7.3E-26 234.4 4.2 105 1202-1332 344-452 (465)
7 3nd0_A SLL0855 protein; CLC fa 99.8 3E-21 1E-25 232.7 4.9 105 1202-1332 336-444 (466)
8 4ene_A CLC-EC1, H(+)/CL(-) exc 99.8 2.4E-20 8.1E-25 224.1 7.6 104 1202-1331 329-436 (446)
9 2d4z_A Chloride channel protei 99.7 6.9E-17 2.4E-21 180.2 13.2 159 804-969 1-246 (250)
10 3k6e_A CBS domain protein; str 99.6 3.8E-15 1.3E-19 154.1 11.2 129 816-972 15-145 (156)
11 2j9l_A Chloride channel protei 99.6 2.8E-14 9.6E-19 149.2 14.7 166 806-974 1-170 (185)
12 4esy_A CBS domain containing m 99.5 9.5E-15 3.2E-19 152.1 9.2 141 812-970 14-163 (170)
13 3i8n_A Uncharacterized protein 99.5 1.1E-14 3.9E-19 144.5 9.3 122 813-969 3-129 (130)
14 3lhh_A CBS domain protein; str 99.5 3.2E-14 1.1E-18 148.7 13.2 125 813-973 39-168 (172)
15 3hf7_A Uncharacterized CBS-dom 99.5 1.9E-14 6.4E-19 143.5 10.7 123 816-970 2-128 (130)
16 3lfr_A Putative metal ION tran 99.5 5.8E-15 2E-19 148.1 6.9 125 815-973 2-131 (136)
17 3lv9_A Putative transporter; C 99.5 4.4E-14 1.5E-18 143.2 13.1 122 813-970 20-146 (148)
18 3oco_A Hemolysin-like protein 99.5 2E-14 7E-19 146.9 10.2 128 813-974 17-148 (153)
19 3lqn_A CBS domain protein; csg 99.5 2.2E-14 7.6E-19 145.4 9.7 142 805-972 4-146 (150)
20 3jtf_A Magnesium and cobalt ef 99.5 2.5E-14 8.5E-19 142.1 9.5 122 814-970 3-127 (129)
21 3nqr_A Magnesium and cobalt ef 99.5 1.3E-14 4.3E-19 143.6 6.9 120 815-969 2-126 (127)
22 3ocm_A Putative membrane prote 99.5 1.2E-13 4.2E-18 145.1 12.5 126 813-974 33-162 (173)
23 3ctu_A CBS domain protein; str 99.5 7.7E-14 2.6E-18 142.5 10.2 136 811-973 10-146 (156)
24 3kpb_A Uncharacterized protein 99.5 1.2E-13 4E-18 134.8 11.0 116 816-969 1-120 (122)
25 2ef7_A Hypothetical protein ST 99.5 3.1E-13 1.1E-17 133.9 13.6 123 814-971 2-127 (133)
26 3fv6_A YQZB protein; CBS domai 99.5 3E-13 1E-17 139.0 13.7 130 811-974 12-149 (159)
27 3fhm_A Uncharacterized protein 99.5 2.4E-13 8.2E-18 140.6 12.2 132 811-972 19-153 (165)
28 3gby_A Uncharacterized protein 99.5 1.5E-13 5E-18 136.0 9.9 121 814-969 3-126 (128)
29 2rih_A Conserved protein with 99.4 4.7E-13 1.6E-17 134.3 13.4 120 815-969 4-128 (141)
30 2yzi_A Hypothetical protein PH 99.4 6.2E-13 2.1E-17 132.6 13.8 125 813-972 4-132 (138)
31 3kh5_A Protein MJ1225; AMPK, A 99.4 1.8E-13 6.3E-18 151.8 10.4 165 815-1015 83-255 (280)
32 3ddj_A CBS domain-containing p 99.4 9.3E-14 3.2E-18 156.4 8.1 165 815-1015 92-259 (296)
33 1o50_A CBS domain-containing p 99.4 7.7E-13 2.6E-17 135.6 13.7 139 812-970 12-154 (157)
34 1pbj_A Hypothetical protein; s 99.4 7.2E-13 2.5E-17 129.5 12.1 119 816-969 1-122 (125)
35 4gqw_A CBS domain-containing p 99.4 3.1E-13 1.1E-17 136.2 9.7 140 814-972 3-146 (152)
36 2p9m_A Hypothetical protein MJ 99.4 7.7E-13 2.6E-17 131.7 12.0 124 812-969 4-136 (138)
37 2pfi_A Chloride channel protei 99.4 5.8E-13 2E-17 136.3 11.3 130 813-971 10-149 (164)
38 2emq_A Hypothetical conserved 99.4 9.6E-13 3.3E-17 134.1 12.5 134 812-972 7-142 (157)
39 3sl7_A CBS domain-containing p 99.4 4.1E-13 1.4E-17 139.5 9.9 147 815-972 3-159 (180)
40 1yav_A Hypothetical protein BS 99.4 7.4E-13 2.5E-17 135.8 11.6 135 812-973 10-146 (159)
41 2o16_A Acetoin utilization pro 99.4 9.6E-13 3.3E-17 135.6 11.9 129 815-969 4-135 (160)
42 2rc3_A CBS domain; in SITU pro 99.4 1.1E-12 3.7E-17 130.6 11.8 122 817-970 7-132 (135)
43 3oi8_A Uncharacterized protein 99.4 1.7E-13 5.9E-18 140.8 6.1 116 813-964 35-155 (156)
44 3kxr_A Magnesium transporter, 99.4 9.1E-13 3.1E-17 142.5 11.9 122 814-975 52-180 (205)
45 3kh5_A Protein MJ1225; AMPK, A 99.4 1.7E-12 5.9E-17 144.0 14.0 171 819-1015 7-180 (280)
46 2yzq_A Putative uncharacterize 99.4 4.3E-13 1.5E-17 149.4 8.8 154 816-1015 1-158 (282)
47 2v8q_E 5'-AMP-activated protei 99.4 2.5E-12 8.6E-17 147.1 15.4 187 811-1015 30-225 (330)
48 1y5h_A Hypothetical protein RV 99.4 3.1E-13 1.1E-17 133.9 6.8 122 814-969 6-131 (133)
49 2nyc_A Nuclear protein SNF4; b 99.4 1.5E-12 5.3E-17 130.1 11.8 123 814-969 6-141 (144)
50 3k2v_A Putative D-arabinose 5- 99.4 1.4E-12 4.8E-17 132.4 11.4 119 815-965 27-148 (149)
51 4fry_A Putative signal-transdu 99.4 1.7E-12 5.9E-17 132.6 11.1 127 816-973 7-139 (157)
52 1pvm_A Conserved hypothetical 99.3 2.1E-12 7.2E-17 136.1 10.5 123 815-969 8-133 (184)
53 2uv4_A 5'-AMP-activated protei 99.3 4E-12 1.4E-16 129.5 11.2 125 811-969 18-151 (152)
54 2qrd_G Protein C1556.08C; AMPK 99.3 6.5E-12 2.2E-16 143.8 14.2 181 811-1015 17-217 (334)
55 2yzq_A Putative uncharacterize 99.3 3.8E-12 1.3E-16 141.7 11.7 169 815-1016 59-254 (282)
56 1vr9_A CBS domain protein/ACT 99.3 3.6E-12 1.2E-16 138.1 11.2 153 814-1016 11-166 (213)
57 3pc3_A CG1753, isoform A; CBS, 99.3 6.9E-12 2.3E-16 153.9 13.0 146 794-972 361-514 (527)
58 3t4n_C Nuclear protein SNF4; C 99.3 4.9E-12 1.7E-16 144.2 10.7 164 818-1015 116-294 (323)
59 3ddj_A CBS domain-containing p 99.3 7.3E-12 2.5E-16 141.0 11.7 170 812-1015 16-188 (296)
60 3t4n_C Nuclear protein SNF4; C 99.3 1.2E-11 4E-16 141.1 13.2 187 811-1015 25-222 (323)
61 2yvy_A MGTE, Mg2+ transporter 99.3 1.4E-11 5E-16 138.7 11.9 120 814-973 133-261 (278)
62 2oux_A Magnesium transporter; 99.2 8.8E-12 3E-16 141.4 9.4 121 814-974 135-264 (286)
63 2v8q_E 5'-AMP-activated protei 99.2 1.9E-11 6.4E-16 139.9 10.4 166 817-1015 119-297 (330)
64 3l2b_A Probable manganase-depe 99.2 2.9E-11 1E-15 133.1 9.7 147 815-968 6-243 (245)
65 2zy9_A Mg2+ transporter MGTE; 99.2 7.8E-11 2.7E-15 142.8 12.2 118 814-971 153-279 (473)
66 2qrd_G Protein C1556.08C; AMPK 99.1 1.9E-10 6.6E-15 131.6 14.2 165 819-1015 110-289 (334)
67 4fxs_A Inosine-5'-monophosphat 99.1 5.2E-12 1.8E-16 153.7 0.7 160 764-968 36-208 (496)
68 3usb_A Inosine-5'-monophosphat 99.1 2.9E-10 9.8E-15 138.9 12.9 116 817-969 114-234 (511)
69 1me8_A Inosine-5'-monophosphat 99.1 1.1E-11 3.8E-16 151.2 -0.7 198 767-1017 47-258 (503)
70 1vrd_A Inosine-5'-monophosphat 99.1 8E-12 2.7E-16 152.2 -2.1 172 753-970 32-216 (494)
71 4avf_A Inosine-5'-monophosphat 99.1 1.4E-11 4.6E-16 149.9 -0.8 160 763-968 34-206 (490)
72 1jcn_A Inosine monophosphate d 99.0 2.7E-12 9.2E-17 157.1 -11.7 172 756-968 47-232 (514)
73 1zfj_A Inosine monophosphate d 99.0 3.1E-09 1.1E-13 129.2 15.1 116 817-969 91-211 (491)
74 2cu0_A Inosine-5'-monophosphat 98.9 2.1E-11 7.3E-16 148.2 -6.9 165 756-968 32-207 (486)
75 4af0_A Inosine-5'-monophosphat 98.8 7.6E-10 2.6E-14 132.8 0.1 104 832-968 149-257 (556)
76 4esy_A CBS domain containing m 98.5 1.8E-08 6.1E-13 104.6 0.6 104 913-1016 17-138 (170)
77 3lhh_A CBS domain protein; str 98.5 4.4E-07 1.5E-11 94.5 10.5 94 912-1016 40-139 (172)
78 3lv9_A Putative transporter; C 98.5 4.4E-07 1.5E-11 91.6 10.2 94 912-1016 21-120 (148)
79 3k2v_A Putative D-arabinose 5- 98.5 4E-07 1.4E-11 92.1 9.8 94 914-1015 28-127 (149)
80 2yzi_A Hypothetical protein PH 98.5 6E-07 2.1E-11 89.1 10.9 96 913-1015 6-104 (138)
81 3kpb_A Uncharacterized protein 98.4 3.5E-07 1.2E-11 88.7 8.6 89 915-1015 2-94 (122)
82 3gby_A Uncharacterized protein 98.4 1.6E-07 5.6E-12 92.4 6.2 94 912-1015 3-100 (128)
83 3k6e_A CBS domain protein; str 98.4 1E-07 3.5E-12 98.3 4.7 120 915-1037 16-141 (156)
84 2o16_A Acetoin utilization pro 98.4 5.8E-07 2E-11 92.2 10.0 101 914-1015 5-110 (160)
85 2rih_A Conserved protein with 98.4 1.2E-06 3.9E-11 87.6 10.8 92 914-1015 5-102 (141)
86 3fv6_A YQZB protein; CBS domai 98.4 9E-07 3.1E-11 90.6 9.9 95 913-1015 16-115 (159)
87 3lqn_A CBS domain protein; csg 98.4 4.3E-07 1.5E-11 91.6 7.3 101 913-1017 14-120 (150)
88 1pbj_A Hypothetical protein; s 98.4 8.8E-07 3E-11 86.1 9.2 93 915-1015 2-97 (125)
89 2ef7_A Hypothetical protein ST 98.4 1.2E-06 4E-11 86.4 9.9 93 914-1015 4-99 (133)
90 2p9m_A Hypothetical protein MJ 98.3 9.6E-07 3.3E-11 87.4 8.6 92 913-1013 7-103 (138)
91 1pvm_A Conserved hypothetical 98.3 1.7E-06 5.9E-11 90.8 10.5 96 914-1015 9-107 (184)
92 2emq_A Hypothetical conserved 98.3 9E-07 3.1E-11 89.8 7.6 102 913-1017 10-116 (157)
93 3fhm_A Uncharacterized protein 98.3 1.3E-06 4.4E-11 90.0 8.6 98 911-1015 21-125 (165)
94 1yav_A Hypothetical protein BS 98.3 6.4E-07 2.2E-11 91.5 6.2 100 913-1014 13-117 (159)
95 3i8n_A Uncharacterized protein 98.3 1.5E-06 5E-11 85.9 8.6 93 913-1016 5-104 (130)
96 1y5h_A Hypothetical protein RV 98.3 7.6E-07 2.6E-11 87.8 6.1 96 913-1015 7-106 (133)
97 3lfr_A Putative metal ION tran 98.3 7E-07 2.4E-11 89.1 5.7 94 914-1016 3-102 (136)
98 3nqr_A Magnesium and cobalt ef 98.3 6.2E-07 2.1E-11 88.2 5.2 93 914-1016 3-101 (127)
99 3hf7_A Uncharacterized CBS-dom 98.3 1.4E-06 4.7E-11 86.4 7.7 95 914-1016 2-102 (130)
100 1o50_A CBS domain-containing p 98.2 1.7E-06 5.8E-11 88.3 8.5 103 911-1015 13-127 (157)
101 2rc3_A CBS domain; in SITU pro 98.2 2.1E-06 7E-11 85.0 8.6 95 914-1015 6-106 (135)
102 3oco_A Hemolysin-like protein 98.2 1.8E-06 6.2E-11 87.8 8.1 93 913-1016 19-118 (153)
103 4gqw_A CBS domain-containing p 98.2 1.1E-06 3.6E-11 88.2 6.1 102 913-1015 4-117 (152)
104 3ctu_A CBS domain protein; str 98.2 1.1E-06 3.8E-11 89.3 6.3 96 914-1013 15-116 (156)
105 2pfi_A Chloride channel protei 98.2 2.4E-06 8.3E-11 86.9 8.7 100 913-1015 12-122 (164)
106 3jtf_A Magnesium and cobalt ef 98.2 1.2E-06 3.9E-11 86.6 5.9 92 913-1016 4-101 (129)
107 3ghd_A A cystathionine beta-sy 98.2 2.4E-06 8.3E-11 76.8 7.5 69 831-927 2-70 (70)
108 2j9l_A Chloride channel protei 98.2 3.1E-06 1.1E-10 88.0 9.2 104 913-1016 10-141 (185)
109 2d4z_A Chloride channel protei 98.2 3.8E-06 1.3E-10 93.7 9.5 59 911-969 10-73 (250)
110 3l2b_A Probable manganase-depe 98.1 2.8E-06 9.4E-11 93.3 7.7 57 913-969 6-65 (245)
111 3oi8_A Uncharacterized protein 98.1 1.8E-06 6.2E-11 88.3 5.5 93 913-1016 37-135 (156)
112 3sl7_A CBS domain-containing p 98.1 1.3E-06 4.4E-11 90.4 4.4 101 914-1015 4-130 (180)
113 2nyc_A Nuclear protein SNF4; b 98.1 6.9E-06 2.4E-10 81.6 8.8 90 919-1014 16-114 (144)
114 2uv4_A 5'-AMP-activated protei 98.1 6.4E-06 2.2E-10 83.5 8.5 95 913-1015 22-125 (152)
115 4fry_A Putative signal-transdu 98.1 4.8E-06 1.6E-10 84.6 7.4 94 914-1015 7-110 (157)
116 3ocm_A Putative membrane prote 98.0 9.8E-06 3.3E-10 84.9 9.3 91 913-1016 35-132 (173)
117 3pc3_A CG1753, isoform A; CBS, 98.0 7.4E-06 2.5E-10 100.5 8.9 97 912-1015 382-483 (527)
118 3kxr_A Magnesium transporter, 98.0 1.6E-05 5.4E-10 85.7 9.4 88 914-1015 54-148 (205)
119 1vr9_A CBS domain protein/ACT 97.9 7.6E-06 2.6E-10 88.4 6.1 88 914-1015 13-104 (213)
120 2oux_A Magnesium transporter; 97.9 1.1E-05 3.6E-10 91.4 6.4 89 913-1015 136-233 (286)
121 3ghd_A A cystathionine beta-sy 97.9 1.4E-05 4.9E-10 71.8 5.9 66 924-996 2-70 (70)
122 3fio_A A cystathionine beta-sy 97.9 2.7E-05 9.4E-10 68.3 7.5 68 832-927 3-70 (70)
123 2yvy_A MGTE, Mg2+ transporter 97.7 5.9E-05 2E-09 84.7 9.3 88 914-1015 135-231 (278)
124 2zy9_A Mg2+ transporter MGTE; 97.6 9.9E-05 3.4E-09 89.5 9.1 88 913-1014 154-250 (473)
125 3fio_A A cystathionine beta-sy 97.6 7.8E-05 2.7E-09 65.3 5.8 64 924-994 2-68 (70)
126 4fxs_A Inosine-5'-monophosphat 97.3 0.00048 1.6E-08 83.9 9.5 90 915-1016 90-184 (496)
127 1zfj_A Inosine monophosphate d 97.3 0.00039 1.3E-08 84.5 8.6 89 916-1016 92-186 (491)
128 1vrd_A Inosine-5'-monophosphat 97.3 4.3E-05 1.5E-09 93.0 0.2 88 915-1015 96-189 (494)
129 3usb_A Inosine-5'-monophosphat 97.2 0.00035 1.2E-08 85.5 7.8 88 916-1015 115-208 (511)
130 1me8_A Inosine-5'-monophosphat 97.1 0.0001 3.4E-09 90.1 0.8 85 920-1016 103-196 (503)
131 4avf_A Inosine-5'-monophosphat 96.8 0.00025 8.4E-09 86.4 0.6 88 915-1016 89-182 (490)
132 1jcn_A Inosine monophosphate d 96.4 0.00026 9E-09 86.6 -2.7 90 915-1015 109-207 (514)
133 2cu0_A Inosine-5'-monophosphat 96.3 0.00063 2.1E-08 82.7 0.1 85 916-1016 95-183 (486)
134 4af0_A Inosine-5'-monophosphat 96.2 0.00077 2.6E-08 81.5 0.1 84 918-1015 142-232 (556)
135 2p13_A CBS domain; alpha-beta 83.3 0.9 3.1E-05 42.4 4.1 59 991-1052 14-76 (90)
136 2oai_A Hemolysin; PFAM03471, x 82.4 0.76 2.6E-05 43.3 3.2 59 991-1052 17-80 (94)
137 2pls_A CBS domain protein; APC 82.2 0.74 2.5E-05 42.5 3.0 59 991-1052 8-72 (86)
138 2pli_A Uncharacterized protein 81.9 0.74 2.5E-05 43.1 2.9 58 991-1052 17-77 (91)
139 3llb_A Uncharacterized protein 81.8 0.73 2.5E-05 42.4 2.8 58 991-1052 8-68 (83)
140 2p4p_A Hypothetical protein HD 81.7 0.57 2E-05 43.3 2.1 59 991-1052 8-70 (86)
141 3ded_A Probable hemolysin; str 81.3 0.62 2.1E-05 45.6 2.2 59 991-1052 34-99 (113)
142 3lae_A UPF0053 protein HI0107; 76.7 0.99 3.4E-05 41.3 2.0 58 991-1052 8-68 (81)
143 2r2z_A Hemolysin; APC85144, en 75.7 1.3 4.4E-05 41.5 2.5 58 991-1052 15-77 (93)
144 2o3g_A Putative protein; APC85 74.6 0.67 2.3E-05 43.4 0.2 59 991-1052 16-78 (92)
145 2rk5_A Putative hemolysin; str 72.8 1.6 5.6E-05 40.3 2.4 57 991-1051 7-72 (87)
146 2p3h_A Uncharacterized CBS dom 72.6 2.1 7.1E-05 41.1 3.1 58 991-1053 11-71 (101)
147 2nqw_A CBS domain protein; PFA 71.5 1.5 5.3E-05 41.0 1.9 57 991-1052 14-79 (93)
148 2yko_A LINE-1 ORF1P; RNA-bindi 48.0 26 0.00089 38.3 6.4 131 1002-1134 43-188 (233)
149 2w7a_A LINE-1 ORF1P; RNA-bindi 30.6 15 0.00051 35.2 1.1 70 1014-1086 9-85 (100)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=5.5e-73 Score=707.65 Aligned_cols=544 Identities=19% Similarity=0.305 Sum_probs=388.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhccc--cccccCchhhhHHHHHHHHHhhcCCCCCCcchHHH
Q psy9748 113 EYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEIKTILSGFI--IRGYLGKWTLIIKSVGIMLAVSAGLSLGKEGPMVH 190 (1359)
Q Consensus 113 ~~~~~~~~~~~~~~~a~~l~~~~~p~a~GsGIpeik~~l~g~~--~~~~l~~~tl~~K~i~~~lav~sGls~GkEGP~vh 190 (1359)
.|..|+++++.++.++++++++++|+++||||||||++++|.. +++++++|++++|++++++++++|+|+|||||+||
T Consensus 51 ~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~l~g~~~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vq 130 (632)
T 3org_A 51 GYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSILSGFYDKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVH 130 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHHTTTTHHHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHhCccccccccccHHHHHHHHHHHHHHHhcCCCccccchHHH
Confidence 5566778888889999999999999999999999999999986 78899999999999999999999999999999999
Q ss_pred HHHHHHHHHhh--hcccCCCChhhHHHHHHhhHhhhhhhhcCCCccceeeeeeecccccceeehhhhhhhhhhccccccc
Q psy9748 191 IASCIGNILSY--LFPKYGRNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSFFLFFRIFHLEMEGRRRRGRPRLR 268 (1359)
Q Consensus 191 iga~ig~~l~~--~~~~~~~~~~~~r~ll~agaaAGvaa~FgaPigGvlFalE~l~~~~~~~~~~~~~~~~~~~Ar~~~r 268 (1359)
+|+++|+.++| +|++++.|+++||++++||||||+|++|||||||++|++||+
T Consensus 131 iGa~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~------------------------- 185 (632)
T 3org_A 131 IACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETI------------------------- 185 (632)
T ss_dssp HHHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHH-------------------------
Confidence 99999999999 775445688999999999999999999999999999999995
Q ss_pred cccccccccccccccccccccccccccccccccccccchhhhhHhhhhhhHhhhhhccccccccccccCCcccccccccc
Q psy9748 269 WVDMIHNDIEKEVSYYFPLKTLWRSFPFSIYIRSIPTKWMCDKFELAGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQC 348 (1359)
Q Consensus 269 ~~~G~~~~f~~~~s~~~~~~~~w~~f~~~i~~~~~~~~w~~~~~~~~~~iA~~i~i~~~wl~dlk~G~c~~~~~~~~~~c 348 (1359)
+.+|+.+.+|+++++ +++|+++. +.+.. .
T Consensus 186 -------------~~~~~~~~~~~~~~a-------------------s~~a~~v~---~~~~~-~--------------- 214 (632)
T 3org_A 186 -------------ASFYLVQAFWKGVLS-------------------ALSGAIVY---ELLYT-T--------------- 214 (632)
T ss_dssp -------------CSEEETTHHHHHHHH-------------------HHHHHHHT---TC--------------------
T ss_pred -------------HHHHhHHHHHHHHHH-------------------HHHHHHHH---HHhcc-C---------------
Confidence 345667788999988 78888766 11100 0
Q ss_pred cCCCCCCcccCCCCCCCCCcccccccceeeccccccccCCCCCcccccchhhhhhhccCccccccchhHHHHHHHHHHHH
Q psy9748 349 CWSSNETSFEDTGNCSQPKPLQQHQQHFHYDILNNYEDVNKPPGVLLQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLF 428 (1359)
Q Consensus 349 c~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~~~~~~~~~~~~~~~W~~w~~~~~~~~~~~~~~~~e~i~fil~gv~~ 428 (1359)
+. ...+|.. .|+.+ ..| ...++ .|+++|+ +
T Consensus 215 ------------~~---------~~~~~~~-------~~~~~----~~~----------------~~~~l-~~~~lGi-~ 244 (632)
T 3org_A 215 ------------PL---------VEAFEGT-------NFDAS----DVS----------------RTQTL-LYAILGA-L 244 (632)
T ss_dssp ----------------------------------------------CCC----------------CSCTH-HHHHHHH-H
T ss_pred ------------cc---------ccccccc-------ccccc----CCC----------------cHHHH-HHHHHHH-H
Confidence 00 0001111 11100 012 34578 8999999 9
Q ss_pred HHHHHHHHHHhhhhhcccCCCccccCCCCCCCCCccccccccccchhhhhhhhhhccCCCCCCccccCCCCCCCcccccc
Q psy9748 429 ASLAAGLVRMFAPYACGSGIPEALTHPHSLHSDPLSVLTQDSMTVQDVETNYRERERGGQKYPWALFPAGYSGPKFRCLG 508 (1359)
Q Consensus 429 ~gl~g~l~~~~~~~~~g~Gi~eik~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~~~~~~~~~~~~~~~~~ 508 (1359)
+|+.|.+|.+++.++ .++|.++.. .++|++
T Consensus 245 ~Gl~g~~f~~~~~~~----------------------------------~~~~~~~~~-~~~~~~--------------- 274 (632)
T 3org_A 245 MGVLGALFIRCVRSI----------------------------------YELRMRHYP-GTNRYF--------------- 274 (632)
T ss_dssp HHHHHHHHHHHHHHH----------------------------------HHHHHHSST-TCCTHH---------------
T ss_pred HHHHHHHHHHHHHHH----------------------------------HHHHHHhhc-chhHHH---------------
Confidence 999999998877665 222221111 112221
Q ss_pred cchhhhhhhcCCCcccccccccceeEEEeecccccchhhhhhhcccCCCcccCCCCCcccccccccchhhhhhhhhcccc
Q psy9748 509 LDREKAEKEMGNGRTLSLSEDEGIIDITTSGTMNERHLAEQINISHGSGFLDSDEIPGIGQYEDFHTIDWQRDLARDRMR 588 (1359)
Q Consensus 509 ~~~~~~~~~~~n~~~~~~~~~e~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (1359)
+ ..+++++++ .+.| |
T Consensus 275 ---------------------~--~~~~~~~~~-------------------------~l~~-----------------p 289 (632)
T 3org_A 275 ---------------------L--VGVVALFAS-------------------------ALQY-----------------P 289 (632)
T ss_dssp ---------------------H--HHHHHHHHH-------------------------HHTT-----------------T
T ss_pred ---------------------H--HHHHHHHHH-------------------------HHHH-----------------H
Confidence 1 111111111 1111 2
Q ss_pred chhhhcccchhhHHhhhccccccchhhhhhhccccccccccccCCCccccccccccccCCCCCCCCCCCCCCCchhHHHH
Q psy9748 589 HRYIVKRKQNSIIDLIKGAHDAWSGWLCVLLVGLVTDKFIGCCNFFECFAFSDYVINHNATSTSNPTTSEAGPGVYTAVW 668 (1359)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1359)
+.+... ...+.+.. +|.+ |.. ++. + ...+.
T Consensus 290 ~~~g~~-~~~~~i~~------------------l~~~-----~~~------~~~-------------------~-~~~~~ 319 (632)
T 3org_A 290 FRLFAL-DPRATIND------------------LFKA-----VPL------YQT-------------------D-HFGWT 319 (632)
T ss_dssp C-------CHHHHHH------------------HHSC-----C------------------------------------C
T ss_pred HHhcCC-cHHHHHHH------------------HHcC-----Ccc------ccc-------------------c-chhHH
Confidence 221111 11222222 3333 110 000 0 00112
Q ss_pred HHHHHHHHHHHHHHhhcCCcccceeehHHHHHHHHHhHHHHHHhHHhhhhhhhhhhhccCCccccCHHHHHHHHhhcccc
Q psy9748 669 LLMITLVLKLVLTVFTFGIKVPCGRLYLALFEQNKQGTYLSFYFIYFSVSLVVIMFELTGGVRYIVPLMAAAMASKWHKK 748 (1359)
Q Consensus 669 ~L~~~~v~K~~lt~~T~G~g~pgGif~PSL~iGA~~Gr~~g~~~~~~~~~~~~~~~~c~~~~~~i~pg~yAaaa~~a~l~ 748 (1359)
.|++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++.++|. .++|+.||++||+|+++
T Consensus 320 ~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~~~g~~~~~~~p~-------------~~~p~~~a~vGmaa~~~ 386 (632)
T 3org_A 320 ELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLYGELMRVVFGN-------------AIVPGSYAVVGAAAFTA 386 (632)
T ss_dssp CSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHHHHHHHHHHHHCT-------------TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHhCCc-------------ccchHHHHHHHHHHHHH
Confidence 46677899999999999999999999999999999999999998876431 26899999888889999
Q ss_pred ceechhHHHHHHHHHhcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCcch-hhhcccccccccccccCC
Q psy9748 749 LKTLFRLSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLDSK-EEFASTALASDVMQPKHS 827 (1359)
Q Consensus 749 gvtr~pls~vvi~~ElTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd~k-~e~l~~~~V~DVMt~~~~ 827 (1359)
|++|+|++++ |++|+||++++++|+|+++++|+++++.++ ++|||.+++.|++|++++. .+..++.+|+|+|+|+++
T Consensus 387 ~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~-~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~~~ 464 (632)
T 3org_A 387 GVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAFN-RSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEG 464 (632)
T ss_dssp HHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCTTT
T ss_pred HHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHhcCCCccccccccccccCcHHHHhhcCCC
Confidence 9999999875 899999999999999999999999999998 6999999999999998754 345578999999996533
Q ss_pred CCeEEEeCCCCCHHHHHHHHH-hcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhc-cCCCC-ccceecccCCC--
Q psy9748 828 DPLSVLTQDSMTVQDVETLLK-ETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTL-EGLRG-DSIVRFVQNDT-- 902 (1359)
Q Consensus 828 ~pLvviv~~~~TV~el~~lL~-~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~-~~~~~-~s~v~F~~~~~-- 902 (1359)
++.+++++|++|+.++|. +++++++||+| ++++++|+|+++||..++.+...+. +.... +....+..++.
T Consensus 465 ---v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd--~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 539 (632)
T 3org_A 465 ---EPHLFPDSEPQHIKGILEKFPNRLVFPVID--ANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSE 539 (632)
T ss_dssp ---SCCBCSSSCHHHHHHHHHHSTTCCEECBBC--TTCBBCCEESHHHHTTTTTTC------------------------
T ss_pred ---ceEecCCCcHHHHHHHHHhcCCcceEEEEe--cCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHh
Confidence 346789999999999999 89999999997 5789999999999998764321100 00000 00000110000
Q ss_pred --------CCC--CCC------CCCccc-ccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHH
Q psy9748 903 --------QPQ--PLP------GAPPIL-RLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDS 962 (1359)
Q Consensus 903 --------~p~--~~~------~~~~~i-dL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkD 962 (1359)
.|. ... ...++. +++++|+++|++|+++++++++.+.|.+ +++||+ |+|+++||||++|
T Consensus 540 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~D 618 (632)
T 3org_A 540 NIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVERED 618 (632)
T ss_dssp -------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGG
T ss_pred hcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhh
Confidence 000 000 000112 3889999999999999999999994444 679999 5559999999999
Q ss_pred HHHHHh
Q psy9748 963 IVRFVQ 968 (1359)
Q Consensus 963 ILr~l~ 968 (1359)
+++.+.
T Consensus 619 ll~~~~ 624 (632)
T 3org_A 619 VAYGYS 624 (632)
T ss_dssp TEECCC
T ss_pred HHHHHh
Confidence 987654
No 2
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=1.9e-52 Score=503.72 Aligned_cols=393 Identities=19% Similarity=0.171 Sum_probs=282.6
Q ss_pred ccHHHHHHHhhhhchhh---HHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHhccCCCCCChHHH
Q psy9748 91 LQWLTWAEVMGSNKEGF---MAYTLEY--------------------VFFIAWALLFASLAAGLVRMFAPYACGSGIPEI 147 (1359)
Q Consensus 91 ~~W~~ws~~~g~~~~~~---~~~~~~~--------------------~~~~~~~~~~~~~a~~l~~~~~p~a~GsGIpei 147 (1359)
.+|...+.++|...|.. +...+++ +.+++.+..+++++++++++++|+++|||||||
T Consensus 29 ~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v 108 (466)
T 3nd0_A 29 PRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQI 108 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHH
Confidence 46888888888776541 2222222 122222334456677899999999999999999
Q ss_pred HHHHhccccccccCchhhhHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHhhhcccCCCChhhHHHHHHhhHhhhhhh
Q psy9748 148 KTILSGFIIRGYLGKWTLIIKSVGIMLAVSAGLSLGKEGPMVHIASCIGNILSYLFPKYGRNEAKKREILSAAAAAGVSV 227 (1359)
Q Consensus 148 k~~l~g~~~~~~l~~~tl~~K~i~~~lav~sGls~GkEGP~vhiga~ig~~l~~~~~~~~~~~~~~r~ll~agaaAGvaa 227 (1359)
|++++|. +++.++|+++.|++++++++++|+|+|||||+||+|+++|+.++|+| ++++++||++++||+|||+|+
T Consensus 109 ~~~l~g~--~~~~~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~---~~~~~~~r~ll~aGaAAGlaA 183 (466)
T 3nd0_A 109 EGHLEGK--LPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWF---KATQENQRILIAVGAGAGLAT 183 (466)
T ss_dssp HHHTTSS--SCCCHHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC--CCCchHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHc---CCChhHHHHHHHHHHHHHHHH
Confidence 9999984 35567899999999999999999999999999999999999999999 688999999999999999999
Q ss_pred hcCCCccceeeeeeecccccceeehhhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccch
Q psy9748 228 AFGAPIGGVLFSLEEVSFFLFFRIFHLEMEGRRRRGRPRLRWVDMIHNDIEKEVSYYFPLKTLWRSFPFSIYIRSIPTKW 307 (1359)
Q Consensus 228 ~FgaPigGvlFalE~l~~~~~~~~~~~~~~~~~~~Ar~~~r~~~G~~~~f~~~~s~~~~~~~~w~~f~~~i~~~~~~~~w 307 (1359)
+||||+||++|++||+..+|+ .....+++++++
T Consensus 184 aF~APlaGvlFalE~l~~~~~------------------------------------~~~~~~~~~~~a----------- 216 (466)
T 3nd0_A 184 AFNAPLAGVALIGEEMHPRFR------------------------------------SQTLAYHSLLFG----------- 216 (466)
T ss_dssp HHTCHHHHHHHHHSSSCCCCS------------------------------------SCCTTHHHHHHH-----------
T ss_pred HhCCchHHHHHHHHhhhcccc------------------------------------HHHHHHHHHHHH-----------
Confidence 999999999999999632111 112234456655
Q ss_pred hhhhHhhhhhhHhhhhhccccccccccccCCcccccccccccCCCCCCcccCCCCCCCCCcccccccceeeccccccccC
Q psy9748 308 MCDKFELAGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSNETSFEDTGNCSQPKPLQQHQQHFHYDILNNYEDV 387 (1359)
Q Consensus 308 ~~~~~~~~~~iA~~i~i~~~wl~dlk~G~c~~~~~~~~~~cc~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~~~~~~ 387 (1359)
+++|+++. +. + +++. ..|+++ .+
T Consensus 217 --------s~~a~~v~---------~~----------------------~--~g~~----------~~f~~~------~~ 239 (466)
T 3nd0_A 217 --------CVMATIIL---------RM----------------------I--RGQS----------AIISLT------EF 239 (466)
T ss_dssp --------HHHHHHHH---------HH----------------------H--TCSS----------CSSCCT------TC
T ss_pred --------HHHHHHHH---------HH----------------------H--cCCC----------CceecC------CC
Confidence 77777776 20 0 0100 112220 11
Q ss_pred CCCCcccccchhhhhhhccCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCCCCccccc
Q psy9748 388 NKPPGVLLQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEALTHPHSLHSDPLSVLT 467 (1359)
Q Consensus 388 ~~~~~~~~~W~~w~~~~~~~~~~~~~~~~e~i~fil~gv~~~gl~g~l~~~~~~~~~g~Gi~eik~~~~~~~~~~~~~~~ 467 (1359)
+ .| ...+++.|+++|+ ++|+.|.+|.+...+.
T Consensus 240 ~-------~~----------------~~~~l~~~illGi-~~Gl~g~lf~~~~~~~------------------------ 271 (466)
T 3nd0_A 240 K-------RV----------------PLDSLWMFIILGI-LFGVMGYTFNRGLFKV------------------------ 271 (466)
T ss_dssp C-------CC----------------CGGGHHHHHHHHH-HHHHHHHHHHHHHHHH------------------------
T ss_pred C-------CC----------------CHHHHHHHHHHHH-HHHHHHHHHHHHHHHH------------------------
Confidence 1 12 3457888999998 8889999998876655
Q ss_pred cccccchhhhhhhhhhccCCCCCCccccCCCCCCCcccccccchhhhhhhcCCCcccccccccceeEEEeecccccchhh
Q psy9748 468 QDSMTVQDVETNYRERERGGQKYPWALFPAGYSGPKFRCLGLDREKAEKEMGNGRTLSLSEDEGIIDITTSGTMNERHLA 547 (1359)
Q Consensus 468 ~~~~~~~~~~~~~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~e~~~~~~~~~t~~~~~~~ 547 (1359)
.+++++... ..|+. + ..+.+++++
T Consensus 272 ----------~~~~~~~~~--~~~~~------------------------------------~--~~l~g~~~g------ 295 (466)
T 3nd0_A 272 ----------LDWFDRLPP--LATKW------------------------------------K--GFLLGSIIG------ 295 (466)
T ss_dssp ----------HHHHHTCCH--HHHHH------------------------------------H--HHHHHHHHH------
T ss_pred ----------HHHHHHccc--ccHHH------------------------------------H--HHHHHHHHH------
Confidence 222221100 00110 1 111112221
Q ss_pred hhhhcccCCCcccCCCCCcccccccccchhhhhhhhhccccchhhhcccchhhHHhhhccccccchhhhhhhcccccccc
Q psy9748 548 EQINISHGSGFLDSDEIPGIGQYEDFHTIDWQRDLARDRMRHRYIVKRKQNSIIDLIKGAHDAWSGWLCVLLVGLVTDKF 627 (1359)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 627 (1359)
++.+ ..|.... .+.+.++. ++++
T Consensus 296 -------------------~l~~-----------------~~p~~~G-~G~~~i~~------------------~~~~-- 318 (466)
T 3nd0_A 296 -------------------ILSL-----------------FPLPLTD-GGDNAVLW------------------AFNS-- 318 (466)
T ss_dssp -------------------HHTT-----------------SSSSCSS-SSHHHHHH------------------HTTS--
T ss_pred -------------------HHHH-----------------HHHHHcC-CcHHHHHH------------------HHcC--
Confidence 1111 0000000 11111111 1111
Q ss_pred ccccCCCccccccccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCcccceeehHHHHHHHHHhHH
Q psy9748 628 IGCCNFFECFAFSDYVINHNATSTSNPTTSEAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGRLYLALFEQNKQGTY 707 (1359)
Q Consensus 628 ~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~K~~lt~~T~G~g~pgGif~PSL~iGA~~Gr~ 707 (1359)
. ..+..|++++++|+++|++|+|+|+|||+|+|||++||++|++
T Consensus 319 ---------------------------------~---~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~ 362 (466)
T 3nd0_A 319 ---------------------------------Q---SHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVA 362 (466)
T ss_dssp ---------------------------------C---CCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHH
T ss_pred ---------------------------------C---ccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHH
Confidence 0 0235688899999999999999999999999999999999999
Q ss_pred HHHHhHHhhhhhhhhhhhccCCccccCHHHHHHHHhhccccceechhHHHHHHHHHhcCCcchHHHHhHHHHHHHHHHhh
Q psy9748 708 LSFYFIYFSVSLVVIMFELTGGVRYIVPLMAAAMASKWHKKLKTLFRLSLVVIMFELTGGVRYIVPLMAAAMASKWVGDA 787 (1359)
Q Consensus 708 ~g~~~~~~~~~~~~~~~~c~~~~~~i~pg~yAaaa~~a~l~gvtr~pls~vvi~~ElTG~~~~ilP~miav~is~~v~~~ 787 (1359)
+|.+++.++| ...++|+.||++||+|+++|++|+|+|+++|++|+||++++++|+|+++++|++++|.
T Consensus 363 ~g~~~~~~~p------------~~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~ 430 (466)
T 3nd0_A 363 MARHFHLLFP------------SQIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEA 430 (466)
T ss_dssp HHHHHHHHCT------------TTCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCC------------ccccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHH
Confidence 9999887654 1357899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcchhhhhcc
Q psy9748 788 LGKQGIYDAHIMLN 801 (1359)
Q Consensus 788 ~~~~sIYd~~I~ln 801 (1359)
+++++|||.+++..
T Consensus 431 ~~~~~iY~~~l~r~ 444 (466)
T 3nd0_A 431 LGGKPIYTVLLERT 444 (466)
T ss_dssp SCCCCHHHHHHHHH
T ss_pred hCCCChHHHHHHHH
Confidence 99999999998743
No 3
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=1.1e-51 Score=495.35 Aligned_cols=395 Identities=19% Similarity=0.222 Sum_probs=280.1
Q ss_pred ccHHHHHHHhhhhchhh---HHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHhccCCCCCChHHH
Q psy9748 91 LQWLTWAEVMGSNKEGF---MAYTLEYV--------------------FFIAWALLFASLAAGLVRMFAPYACGSGIPEI 147 (1359)
Q Consensus 91 ~~W~~ws~~~g~~~~~~---~~~~~~~~--------------------~~~~~~~~~~~~a~~l~~~~~p~a~GsGIpei 147 (1359)
.+|...+.++|...|.. +...++++ .+++++..++.++++++++++|+++|||||||
T Consensus 18 ~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v 97 (446)
T 4ene_A 18 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEI 97 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHH
Confidence 47888888888776541 22222221 12223345667778899999999999999999
Q ss_pred HHHHhccccccccCchhhhHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHhhhcccCCCChhhHH-HHHHhhHhhhhh
Q psy9748 148 KTILSGFIIRGYLGKWTLIIKSVGIMLAVSAGLSLGKEGPMVHIASCIGNILSYLFPKYGRNEAKKR-EILSAAAAAGVS 226 (1359)
Q Consensus 148 k~~l~g~~~~~~l~~~tl~~K~i~~~lav~sGls~GkEGP~vhiga~ig~~l~~~~~~~~~~~~~~r-~ll~agaaAGva 226 (1359)
|++++|. +++.++|+++.|++++++++++|+|+|||||+||+|+++|+.++|+| +.+++++| ++++||+|||+|
T Consensus 98 ~~~l~~~--~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~---~~~~~~~r~~ll~aGaaAG~a 172 (446)
T 4ene_A 98 EGALEDQ--RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIF---RLKGDEARHTLLATGAAAGLA 172 (446)
T ss_dssp HHHHHTC--SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHT---TCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC--CccchHHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHHHH
Confidence 9999983 34455889999999999999999999999999999999999999998 56777776 999999999999
Q ss_pred hhcCCCccceeeeeeecccccceeehhhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccc
Q psy9748 227 VAFGAPIGGVLFSLEEVSFFLFFRIFHLEMEGRRRRGRPRLRWVDMIHNDIEKEVSYYFPLKTLWRSFPFSIYIRSIPTK 306 (1359)
Q Consensus 227 a~FgaPigGvlFalE~l~~~~~~~~~~~~~~~~~~~Ar~~~r~~~G~~~~f~~~~s~~~~~~~~w~~f~~~i~~~~~~~~ 306 (1359)
++||||+||++|++|+++.++ ....+.+++++++
T Consensus 173 aaF~aPlaGvlFalE~l~~~~------------------------------------~~~~~~~~~~~~a---------- 206 (446)
T 4ene_A 173 AAFNAPLAGILFIIEEMRPQF------------------------------------RYTLISIKAVFIG---------- 206 (446)
T ss_dssp HHHTCHHHHHHHHHHTTSCSS------------------------------------SCCCCCHHHHHHH----------
T ss_pred HHhCCcchHHHHHHHHHHhhc------------------------------------chhHHHHHHHHHH----------
Confidence 999999999999999963111 0112456666666
Q ss_pred hhhhhHhhhhhhHhhhhhccccccccccccCCcccccccccccCCCCCCcccCCCCCCCCCcccccccceeecccccccc
Q psy9748 307 WMCDKFELAGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSNETSFEDTGNCSQPKPLQQHQQHFHYDILNNYED 386 (1359)
Q Consensus 307 w~~~~~~~~~~iA~~i~i~~~wl~dlk~G~c~~~~~~~~~~cc~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~~~~~ 386 (1359)
+++|+++. +. +. ++ ...|++ ..
T Consensus 207 ---------s~~a~~v~---------~~----------------------~~--g~----------~~~~~~------~~ 228 (446)
T 4ene_A 207 ---------VIMSTIMY---------RI----------------------FN--HE----------VALIDV------GK 228 (446)
T ss_dssp ---------HHHHHHHH---------HH----------------------TT--TT----------CCSCCC------CC
T ss_pred ---------HHHHHHHH---------HH----------------------Hc--CC----------Cceeec------CC
Confidence 77777776 21 00 10 011222 01
Q ss_pred CCCCCcccccchhhhhhhccCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCCCCcccc
Q psy9748 387 VNKPPGVLLQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAAGLVRMFAPYACGSGIPEALTHPHSLHSDPLSVL 466 (1359)
Q Consensus 387 ~~~~~~~~~~W~~w~~~~~~~~~~~~~~~~e~i~fil~gv~~~gl~g~l~~~~~~~~~g~Gi~eik~~~~~~~~~~~~~~ 466 (1359)
++. + ...+++.|+++|+ ++|+.|.+|.+.+.+.
T Consensus 229 ~~~-------~----------------~~~~l~~~illGi-~~Gl~g~~f~~~~~~~----------------------- 261 (446)
T 4ene_A 229 LSD-------A----------------PLNTLWLYLILGI-IFGIFGPIFNKWVLGM----------------------- 261 (446)
T ss_dssp CCC-------C----------------CGGGHHHHHHHHH-HHHHHHHHHHHHHHHH-----------------------
T ss_pred CCc-------c----------------CHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-----------------------
Confidence 111 1 3457788999998 9999999998877665
Q ss_pred ccccccchhhhhhhhhhccCCCCCCccccCCCCCCCcccccccchhhhhhhcCCCcccccccccceeEEEeecccccchh
Q psy9748 467 TQDSMTVQDVETNYRERERGGQKYPWALFPAGYSGPKFRCLGLDREKAEKEMGNGRTLSLSEDEGIIDITTSGTMNERHL 546 (1359)
Q Consensus 467 ~~~~~~~~~~~~~~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~e~~~~~~~~~t~~~~~~ 546 (1359)
.+++++... .|.. | ++.. ..+++++++
T Consensus 262 -----------~~~~~~~~~---~~~~-----------~---------------------~~~~--~~l~g~~~g----- 288 (446)
T 4ene_A 262 -----------QDLLHRVHG---GNIT-----------K---------------------WVLM--GGAIGGLCG----- 288 (446)
T ss_dssp -----------HHHHHHHHT---TCHH-----------H---------------------HHHH--HHHHHHHHH-----
T ss_pred -----------HHHHHhccc---cchh-----------H---------------------HHHH--HHHHHHHHH-----
Confidence 222221110 0000 0 0000 000011111
Q ss_pred hhhhhcccCCCcccCCCCCcccccccccchhhhhhhhhccccchhhhcccchhhHHhhhccccccchhhhhhhccccccc
Q psy9748 547 AEQINISHGSGFLDSDEIPGIGQYEDFHTIDWQRDLARDRMRHRYIVKRKQNSIIDLIKGAHDAWSGWLCVLLVGLVTDK 626 (1359)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 626 (1359)
++.+ .+.+
T Consensus 289 --------------------~l~~---------------------------------------------------~~p~- 296 (446)
T 4ene_A 289 --------------------LLGF---------------------------------------------------VAPA- 296 (446)
T ss_dssp --------------------HHHH---------------------------------------------------HCGG-
T ss_pred --------------------HHHH---------------------------------------------------HhHh-
Confidence 1111 0000
Q ss_pred cccccCCCccccccccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCcccceeehHHHHHHHHHhH
Q psy9748 627 FIGCCNFFECFAFSDYVINHNATSTSNPTTSEAGPGVYTAVWLLMITLVLKLVLTVFTFGIKVPCGRLYLALFEQNKQGT 706 (1359)
Q Consensus 627 ~~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~K~~lt~~T~G~g~pgGif~PSL~iGA~~Gr 706 (1359)
.-...+... +...+ +. ..+..|+++++.|+++|++|+|+|+|||+|+|||++||++|+
T Consensus 297 ----~~G~G~~~i-~~~~~--------------~~---~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~ 354 (446)
T 4ene_A 297 ----TSGGGFNLI-PIATA--------------GN---FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGT 354 (446)
T ss_dssp ----GSSCCSTHH-HHHHT--------------TC---SCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHH
T ss_pred ----hcCCcHHHH-HHHHc--------------CC---chHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHH
Confidence 000000000 00000 00 013467888999999999999999999999999999999999
Q ss_pred HHHHHhHHhhhhhhhhhhhccCCccccCHHHHHHHHhhccccceechhHHHHHHHHHhcCCcchHHHHhHHHHHHHHHHh
Q psy9748 707 YLSFYFIYFSVSLVVIMFELTGGVRYIVPLMAAAMASKWHKKLKTLFRLSLVVIMFELTGGVRYIVPLMAAAMASKWVGD 786 (1359)
Q Consensus 707 ~~g~~~~~~~~~~~~~~~~c~~~~~~i~pg~yAaaa~~a~l~gvtr~pls~vvi~~ElTG~~~~ilP~miav~is~~v~~ 786 (1359)
++|..++.++|. ..++|+.||++||+|+++|++|+|+|+++|++|+||++++++|+|+++++|+++++
T Consensus 355 ~~g~~~~~~~p~------------~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~ 422 (446)
T 4ene_A 355 AFGMVAVELFPQ------------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQ 422 (446)
T ss_dssp HHHHHHHHHCGG------------GTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc------------cccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHH
Confidence 999998877542 24789999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcchhhhhc
Q psy9748 787 ALGKQGIYDAHIML 800 (1359)
Q Consensus 787 ~~~~~sIYd~~I~l 800 (1359)
.+++++|||.+++.
T Consensus 423 ~~~~~~iY~~~l~r 436 (446)
T 4ene_A 423 FTGGKPLYSAILAR 436 (446)
T ss_dssp HTTCCCHHHHHHHH
T ss_pred HhCCCChHHHHHHH
Confidence 99999999998864
No 4
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=1.1e-51 Score=497.90 Aligned_cols=368 Identities=19% Similarity=0.233 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHhccccccccCchhhhHHHHHHHHHhhcCCCCCCcchHHHHHHHHH
Q psy9748 117 FIAWALLFASLAAGLVRMFAPYACGSGIPEIKTILSGFIIRGYLGKWTLIIKSVGIMLAVSAGLSLGKEGPMVHIASCIG 196 (1359)
Q Consensus 117 ~~~~~~~~~~~a~~l~~~~~p~a~GsGIpeik~~l~g~~~~~~l~~~tl~~K~i~~~lav~sGls~GkEGP~vhiga~ig 196 (1359)
|+++++.++.+++++++++.|+++|||||||+++++|. ++..++|+++.|++++++++++|+|+|||||+||+|+++|
T Consensus 82 ~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v~~~l~~~--~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig 159 (465)
T 1ots_A 82 AFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQ--RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIG 159 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCCChHHHHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHH
Confidence 44566777788889999999999999999999999984 3456789999999999999999999999999999999999
Q ss_pred HHHhhhcccCC-CChhhHHHHHHhhHhhhhhhhcCCCccceeeeeeecccccceeehhhhhhhhhhcccccccccccccc
Q psy9748 197 NILSYLFPKYG-RNEAKKREILSAAAAAGVSVAFGAPIGGVLFSLEEVSFFLFFRIFHLEMEGRRRRGRPRLRWVDMIHN 275 (1359)
Q Consensus 197 ~~l~~~~~~~~-~~~~~~r~ll~agaaAGvaa~FgaPigGvlFalE~l~~~~~~~~~~~~~~~~~~~Ar~~~r~~~G~~~ 275 (1359)
+.++|+| + .++++||++++||+|||+|++||||+||++|++||++.
T Consensus 160 ~~l~~~~---~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~------------------------------ 206 (465)
T 1ots_A 160 RMVLDIF---RLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRP------------------------------ 206 (465)
T ss_dssp HHHHHHT---TCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSC------------------------------
T ss_pred HHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHH------------------------------
Confidence 9999998 5 48999999999999999999999999999999999632
Q ss_pred ccccccccccccc--cccccccccccccccccchhhhhHhhhhhhHhhhhhccccccccccccCCcccccccccccCCCC
Q psy9748 276 DIEKEVSYYFPLK--TLWRSFPFSIYIRSIPTKWMCDKFELAGSVAGIIDIGSSWMSDLKYGLCPEAFWLNKEQCCWSSN 353 (1359)
Q Consensus 276 ~f~~~~s~~~~~~--~~w~~f~~~i~~~~~~~~w~~~~~~~~~~iA~~i~i~~~wl~dlk~G~c~~~~~~~~~~cc~~~~ 353 (1359)
+++.+ .++.++++ +++|+++. +.
T Consensus 207 --------~~~~~~~~~~~~~~a-------------------s~~a~~v~---------~~------------------- 231 (465)
T 1ots_A 207 --------QFRYTLISIKAVFIG-------------------VIMSTIMY---------RI------------------- 231 (465)
T ss_dssp --------SSSCCCCCHHHHHHH-------------------HHHHHHHH---------HH-------------------
T ss_pred --------hcchHHHHHHHHHHH-------------------HHHHHHHH---------HH-------------------
Confidence 22222 25555555 77777776 21
Q ss_pred CCcccCCCCCCCCCcccccccceeeccccccccCCCCCcccccchhhhhhhccCccccccchhHHHHHHHHHHHHHHHHH
Q psy9748 354 ETSFEDTGNCSQPKPLQQHQQHFHYDILNNYEDVNKPPGVLLQWLTWAEVMGSNKEGFMAYTLEYVFFIAWALLFASLAA 433 (1359)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~f~v~~~~~~~~~~~~~~~~~~W~~w~~~~~~~~~~~~~~~~e~i~fil~gv~~~gl~g 433 (1359)
+ +|.. ..|++ ..++. + ...+++.|+++|+ ++|+.|
T Consensus 232 ---~--~G~~----------~~f~~------~~~~~-------~----------------~~~~l~~~illGi-~~Gl~g 266 (465)
T 1ots_A 232 ---F--NHEV----------ALIDV------GKLSD-------A----------------PLNTLWLYLILGI-IFGIFG 266 (465)
T ss_dssp ---H--SCSC----------CSSCC------CCCCC-------C----------------CGGGHHHHHHHHH-HHHHHH
T ss_pred ---H--cCCC----------ceeec------CCCCC-------C----------------CHHHHHHHHHHHH-HHHHHH
Confidence 0 0100 01111 01111 1 2347888999999 899999
Q ss_pred HHHHHhhhhhcccCCCccccCCCCCCCCCccccccccccchhhhhhhhhhccCCCCCCccccCCCCCCCcccccccchhh
Q psy9748 434 GLVRMFAPYACGSGIPEALTHPHSLHSDPLSVLTQDSMTVQDVETNYRERERGGQKYPWALFPAGYSGPKFRCLGLDREK 513 (1359)
Q Consensus 434 ~l~~~~~~~~~g~Gi~eik~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 513 (1359)
.+|...+.+. .+++++... .|..
T Consensus 267 ~~f~~~~~~~----------------------------------~~~~~~~~~---~~~~-------------------- 289 (465)
T 1ots_A 267 PIFNKWVLGM----------------------------------QDLLHRVHG---GNIT-------------------- 289 (465)
T ss_dssp HHHHHHHHHH----------------------------------HHHHHHHHT---TCHH--------------------
T ss_pred HHHHHHHHHH----------------------------------HHHHHhccc---CCch--------------------
Confidence 9998877665 222222110 0000
Q ss_pred hhhhcCCCcccccccccceeEEEeecccccchhhhhhhcccCCCcccCCCCCcccccccccchhhhhhhhhccccchhhh
Q psy9748 514 AEKEMGNGRTLSLSEDEGIIDITTSGTMNERHLAEQINISHGSGFLDSDEIPGIGQYEDFHTIDWQRDLARDRMRHRYIV 593 (1359)
Q Consensus 514 ~~~~~~n~~~~~~~~~e~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1359)
.++.+ ..+.+++++ ++.+ ..|..-
T Consensus 290 ------------~~~~~--~~i~gl~~g-------------------------~l~~-----------------~~P~~l 313 (465)
T 1ots_A 290 ------------KWVLM--GGAIGGLCG-------------------------LLGF-----------------VAPATS 313 (465)
T ss_dssp ------------HHHHH--HHHHHHHHH-------------------------HHHH-----------------HCGGGS
T ss_pred ------------hHHHH--HHHHHHHHH-------------------------HHHH-----------------HhHhhc
Confidence 00011 111222222 2222 001100
Q ss_pred cccchhhHHhhhccccccchhhhhhhccccccccccccCCCccccccccccccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q psy9748 594 KRKQNSIIDLIKGAHDAWSGWLCVLLVGLVTDKFIGCCNFFECFAFSDYVINHNATSTSNPTTSEAGPGVYTAVWLLMIT 673 (1359)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 673 (1359)
. .+.+.++. ++++ . ..+..|+++
T Consensus 314 G-~G~~~i~~------------------~~~~------------------------------------~--~~~~~l~~~ 336 (465)
T 1ots_A 314 G-GGFNLIPI------------------ATAG------------------------------------N--FSMGMLVFI 336 (465)
T ss_dssp S-CSTTHHHH------------------HHHT------------------------------------C--SCHHHHHHH
T ss_pred C-ChHHHHHH------------------HHcC------------------------------------C--chHHHHHHH
Confidence 0 11111111 1111 0 013467888
Q ss_pred HHHHHHHHHhhcCCcccceeehHHHHHHHHHhHHHHHHhHHhhhhhhhhhhhccCCccccCHHHHHHHHhhccccceech
Q psy9748 674 LVLKLVLTVFTFGIKVPCGRLYLALFEQNKQGTYLSFYFIYFSVSLVVIMFELTGGVRYIVPLMAAAMASKWHKKLKTLF 753 (1359)
Q Consensus 674 ~v~K~~lt~~T~G~g~pgGif~PSL~iGA~~Gr~~g~~~~~~~~~~~~~~~~c~~~~~~i~pg~yAaaa~~a~l~gvtr~ 753 (1359)
++.|+++|++|+|+|+|||+|+|+|++||++|+++|.+++.++| ..+++|+.||++||+|+++|++|+
T Consensus 337 ~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p------------~~~~~~~~~alvGmaa~~a~v~ra 404 (465)
T 1ots_A 337 FVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFP------------QYHLEAGTFAIAGMGALLAASIRA 404 (465)
T ss_dssp HHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCG------------GGTCCHHHHHHHHHTHHHHHTSCC
T ss_pred HHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCC------------cccccHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999887654 235799999999999999999999
Q ss_pred hHHHHHHHHHhcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhcc
Q psy9748 754 RLSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLN 801 (1359)
Q Consensus 754 pls~vvi~~ElTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~ln 801 (1359)
|+|+++|++|+||++++++|+|+++++|++++|.+++++|||.+++.+
T Consensus 405 Plt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 405 PLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999876
No 5
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.90 E-value=4.7e-25 Score=275.72 Aligned_cols=127 Identities=17% Similarity=0.236 Sum_probs=111.5
Q ss_pred eEEEeecccccccccccccchhhhhhcceeeeeee----ccCCCCccccccccccCCccCccceeeecccccccchhhhh
Q psy9748 1202 DIFTFLGKQFEGGLQLTFKHILSLSSHGMIVVCFY----LNSPPSVSSLVWPKVSLSNLTAMQTRMVVCTSNDLTLLLTF 1277 (1359)
Q Consensus 1202 ~~~t~~~~~p~g~f~~~~~~ips~~~g~~~g~~~~----~~~p~~~~~~~~~~~~~~~i~pg~ya~vg~a~~~~~~~~a~ 1277 (1359)
|++|+|..+|.|.| .|++++|+++|..+. .++|.+ ++||.||++||| |+
T Consensus 332 t~~s~g~g~pGGif------~P~l~iGA~~G~~~g~~~~~~~p~~-------------~~p~~~a~vGma--------a~ 384 (632)
T 3org_A 332 VALSIGLPLPAGVF------VPSFLIGAGFGRLYGELMRVVFGNA-------------IVPGSYAVVGAA--------AF 384 (632)
T ss_dssp HHHHTTSSSBCBCH------HHHHHHHHHHHHHHHHHHHHHHCTT-------------SCHHHHHHHHHH--------HH
T ss_pred HHHHHhCCCcchhh------HHHHHHHHHHHHHHHHHHHHhCCcc-------------cchHHHHHHHHH--------HH
Confidence 99999999999999 999999888877743 334532 569999999999 99
Q ss_pred hhhccccchhheehhhhhcCCcchHHHHHHHHHHHHHHHhhcCCCChhhHHHhhcCCCCCCCc-hhhccccccccccc--
Q psy9748 1278 LTLFGTRDVSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLDSK-EEFASTALASDVMQ-- 1354 (1359)
Q Consensus 1278 ~~g~t~~tiS~~vI~fElTg~~~~ilPlMia~~ia~~v~~~~~~~siYd~~i~~k~~P~l~~~-~~~~~~~~v~diM~-- 1354 (1359)
+||++|+| ++++|++||||++++++|+|+++++|++|++.|+ +|+||.+++.|++|++++. .+..++++|+|+|+
T Consensus 385 ~~~v~~ap-~t~vi~~E~tg~~~~~lpl~ia~~~a~~v~~~~~-~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~ 462 (632)
T 3org_A 385 TAGVTRAL-SCAVIIFEVTGQIRHLVPVLISVLLAVIVGNAFN-RSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPI 462 (632)
T ss_dssp HHHHSCCT-THHHHHHHHTCCCSCSHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCT
T ss_pred HHHHHHHH-HHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHhcCCCccccccccccccCcHHHHhhcC
Confidence 99999955 5567999999999999999999999999999998 7999999999999999876 34568899999999
Q ss_pred CCC
Q psy9748 1355 PKL 1357 (1359)
Q Consensus 1355 ~~~ 1357 (1359)
+++
T Consensus 463 ~~v 465 (632)
T 3org_A 463 EGE 465 (632)
T ss_dssp TTS
T ss_pred CCc
Confidence 665
No 6
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.82 E-value=2.1e-21 Score=234.36 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=95.7
Q ss_pred eEEEeecccccccccccccchhhhhhcceeeeeee----ccCCCCccccccccccCCccCccceeeecccccccchhhhh
Q psy9748 1202 DIFTFLGKQFEGGLQLTFKHILSLSSHGMIVVCFY----LNSPPSVSSLVWPKVSLSNLTAMQTRMVVCTSNDLTLLLTF 1277 (1359)
Q Consensus 1202 ~~~t~~~~~p~g~f~~~~~~ips~~~g~~~g~~~~----~~~p~~~~~~~~~~~~~~~i~pg~ya~vg~a~~~~~~~~a~ 1277 (1359)
|.+|+|...|.|.| .|++++|.++|..+. .++|. .+++|+.||++||| |+
T Consensus 344 t~lt~gsG~~GGif------~Psl~iGA~~G~~~g~~~~~~~p~------------~~~~~~~~alvGma--------a~ 397 (465)
T 1ots_A 344 TLLCFSSGAPGGIF------APMLALGTVLGTAFGMVAVELFPQ------------YHLEAGTFAIAGMG--------AL 397 (465)
T ss_dssp HHHHHHTTCSSBSH------HHHHHHHHHHHHHHHHHHHHHCGG------------GTCCHHHHHHHHHT--------HH
T ss_pred HHHHHcCCCChhhh------HHHHHHHHHHHHHHHHHHHHHCCc------------ccccHHHHHHHHHH--------HH
Confidence 99999999999999 999999888887743 23442 24679999999999 99
Q ss_pred hhhccccchhheehhhhhcCCcchHHHHHHHHHHHHHHHhhcCCCChhhHHHhhc
Q psy9748 1278 LTLFGTRDVSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLN 1332 (1359)
Q Consensus 1278 ~~g~t~~tiS~~vI~fElTg~~~~ilPlMia~~ia~~v~~~~~~~siYd~~i~~k 1332 (1359)
++|++|+|+|.++|++|+||++++++|+|+++++|+++++.++++|+||.+++.+
T Consensus 398 ~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 398 LAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp HHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876
No 7
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.82 E-value=3e-21 Score=232.70 Aligned_cols=105 Identities=15% Similarity=0.223 Sum_probs=94.8
Q ss_pred eEEEeecccccccccccccchhhhhhcceeeeee----eccCCCCccccccccccCCccCccceeeecccccccchhhhh
Q psy9748 1202 DIFTFLGKQFEGGLQLTFKHILSLSSHGMIVVCF----YLNSPPSVSSLVWPKVSLSNLTAMQTRMVVCTSNDLTLLLTF 1277 (1359)
Q Consensus 1202 ~~~t~~~~~p~g~f~~~~~~ips~~~g~~~g~~~----~~~~p~~~~~~~~~~~~~~~i~pg~ya~vg~a~~~~~~~~a~ 1277 (1359)
|.+|+|...|.|.| .|++++|.++|..+ ...+|. .+++|+.||++||| |+
T Consensus 336 t~lt~gsG~~GGif------~Psl~iGA~~G~~~g~~~~~~~p~------------~~~~~~~~a~vGma--------a~ 389 (466)
T 3nd0_A 336 TLICYGSGAIGGIF------APMLGIASIVSVAMARHFHLLFPS------------QIPEPAVMAIAGMG--------AL 389 (466)
T ss_dssp HHHHHHTTCBCCSH------HHHHHHHHHHHHHHHHHHHHHCTT------------TCSSTHHHHHHTTS--------HH
T ss_pred HHHHHhCCCCCcee------hHHHHHHHHHHHHHHHHHHHhCCc------------cccCHHHHHHHHHH--------HH
Confidence 99999999999999 99999988888764 333452 14679999999999 99
Q ss_pred hhhccccchhheehhhhhcCCcchHHHHHHHHHHHHHHHhhcCCCChhhHHHhhc
Q psy9748 1278 LTLFGTRDVSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLN 1332 (1359)
Q Consensus 1278 ~~g~t~~tiS~~vI~fElTg~~~~ilPlMia~~ia~~v~~~~~~~siYd~~i~~k 1332 (1359)
++|++|+|+|.++|++||||++++++|+|+++++|++++|.++++|+||.+++..
T Consensus 390 ~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~~~~~~iY~~~l~r~ 444 (466)
T 3nd0_A 390 VAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLERT 444 (466)
T ss_dssp HHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999899999998653
No 8
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.80 E-value=2.4e-20 Score=224.13 Aligned_cols=104 Identities=14% Similarity=0.198 Sum_probs=93.7
Q ss_pred eEEEeecccccccccccccchhhhhhcceeeeeee----ccCCCCccccccccccCCccCccceeeecccccccchhhhh
Q psy9748 1202 DIFTFLGKQFEGGLQLTFKHILSLSSHGMIVVCFY----LNSPPSVSSLVWPKVSLSNLTAMQTRMVVCTSNDLTLLLTF 1277 (1359)
Q Consensus 1202 ~~~t~~~~~p~g~f~~~~~~ips~~~g~~~g~~~~----~~~p~~~~~~~~~~~~~~~i~pg~ya~vg~a~~~~~~~~a~ 1277 (1359)
|.+|+|...|.|.| .|++++|.++|..+. ..+|. .+++|+.||++||| |+
T Consensus 329 t~lt~gsG~~GGif------~Psl~iGA~~G~~~g~~~~~~~p~------------~~~~~~~~a~vGma--------a~ 382 (446)
T 4ene_A 329 TLLCFSSGAPGGIF------APMLALGTVLGTAFGMVAVELFPQ------------YHLEAGTFAIAGMG--------AL 382 (446)
T ss_dssp HHHHHTTTCSSBSH------HHHHHHHHHHHHHHHHHHHHHCGG------------GTCCHHHHHHHHHT--------HH
T ss_pred HHHHHccCCCcchh------HHHHHHHHHHHHHHHHHHHHhCCc------------cccCHHHHHHHHHH--------HH
Confidence 99999999999999 999999877776643 33442 13679999999999 99
Q ss_pred hhhccccchhheehhhhhcCCcchHHHHHHHHHHHHHHHhhcCCCChhhHHHhh
Q psy9748 1278 LTLFGTRDVSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIML 1331 (1359)
Q Consensus 1278 ~~g~t~~tiS~~vI~fElTg~~~~ilPlMia~~ia~~v~~~~~~~siYd~~i~~ 1331 (1359)
++|++|+|+|.++|++||||++++++|+|+++++|++|++.++++|+||.+++.
T Consensus 383 ~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~~~~~iY~~~l~r 436 (446)
T 4ene_A 383 LAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILAR 436 (446)
T ss_dssp HHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764
No 9
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.69 E-value=6.9e-17 Score=180.21 Aligned_cols=159 Identities=13% Similarity=0.233 Sum_probs=112.8
Q ss_pred CCCcchhhhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhh
Q psy9748 804 PFLDSKEEFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAK 883 (1359)
Q Consensus 804 PfLd~k~e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~ 883 (1359)
|.|.+......+++|+|+|+++ ++++.+++++.++.++|.++++++||||+++++++++|+|+++||+.++....
T Consensus 1 P~L~~~~~~~~~~~v~diMt~~-----vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~ 75 (250)
T 2d4z_A 1 PELSWSSANKYNIQVGDIMVRD-----VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRI 75 (250)
T ss_dssp --CCCCCCCCSSCBTTSSSBSS-----CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHH
T ss_pred CCCCCCCcccCCCChHHhcCCC-----CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhh
Confidence 5666665677789999999986 45667899999999999999999999998544579999999999999876432
Q ss_pred hhccCC---------------C-------CccceecccCC-----------------CCCC-------------------
Q psy9748 884 RTLEGL---------------R-------GDSIVRFVQND-----------------TQPQ------------------- 905 (1359)
Q Consensus 884 ~~~~~~---------------~-------~~s~v~F~~~~-----------------~~p~------------------- 905 (1359)
...... . ..+.+.|.... ..|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 155 (250)
T 2d4z_A 76 SAYRRQPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQK 155 (250)
T ss_dssp HTTSSSCCCCCCBCCC----------------------------------------------------------------
T ss_pred hhhhhhhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCcccccccccccccccccccc
Confidence 111000 0 00111121100 0000
Q ss_pred ----------CC--------------CCCCccccccc-ccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEE
Q psy9748 906 ----------PL--------------PGAPPILRLDK-ILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLE 956 (1359)
Q Consensus 906 ----------~~--------------~~~~~~idL~~-iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvG 956 (1359)
.. ......+++++ +|+++|++|.+++|+++|++ +|+ |++||+++| +|+|
T Consensus 156 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~-LF~~lglr~l~V~~~G-rLVG 233 (250)
T 2d4z_A 156 KQKGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHT-LFSLLGLDRAYVTSMG-KLVG 233 (250)
T ss_dssp -----------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHH-HHHHHTCSEEEEEETT-EEEE
T ss_pred ccccccccCcccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHH-HHHHhCCeEEEEEECC-EEEE
Confidence 00 00123455664 79999999999999999999 898 999999875 9999
Q ss_pred EEeHHHHHHHHhh
Q psy9748 957 GLRGDSIVRFVQN 969 (1359)
Q Consensus 957 IITrkDILr~l~~ 969 (1359)
|||+||+++++.+
T Consensus 234 IVTrkDl~kai~~ 246 (250)
T 2d4z_A 234 VVALAEIQAAIEG 246 (250)
T ss_dssp EEEHHHHHHHHHC
T ss_pred EEEHHHHHHHHHH
Confidence 9999999999864
No 10
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.58 E-value=3.8e-15 Score=154.11 Aligned_cols=129 Identities=12% Similarity=0.097 Sum_probs=106.7
Q ss_pred ccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 816 ALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 816 ~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
.+++++|+|+.+ ++++.+++|++++.++|.+++++++||+| ++++++|+|+.+|+..++.......
T Consensus 15 ~~~~~iM~P~~~---v~~v~~~~t~~~a~~~m~~~~~s~~pVvd--~~~~lvGiit~~Di~~~~~~~~~~~--------- 80 (156)
T 3k6e_A 15 GQEETFLTPAKN---LAVLIDTHNADHATLLLSQMTYTRVPVVT--DEKQFVGTIGLRDIMAYQMEHDLSQ--------- 80 (156)
T ss_dssp TTGGGGEEETTS---SCCEETTSBHHHHHHHHTTSSSSEEEEEC--C-CBEEEEEEHHHHHHHHHHHTCCH---------
T ss_pred ccHHHhCcchhH---eEEECCcCCHHHHHHHHHHcCCcEEEEEc--CCCcEEEEEEecchhhhhhhccccc---------
Confidence 468999999764 45678999999999999999999999997 5689999999999998875432110
Q ss_pred ecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc--ceeEEEcCCCcEEEEEeHHHHHHHHhhccC
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT--KQLLFPANAKRTLEGLRGDSIVRFVQNDTQ 972 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr--R~LpVVdegGrLvGIITrkDILr~l~~~~~ 972 (1359)
......+++++|.+.++++++++++.++++ +|. +.+||+|++|+++||||++|+++++.+...
T Consensus 81 -------------~~~~~~~v~~im~~~~~~v~~~~~l~~~~~-~m~~~~~lpVVd~~g~l~GiiT~~Dil~~~~~~~~ 145 (156)
T 3k6e_A 81 -------------EIMADTDIVHMTKTDVAVVSPDFTITEVLH-KLVDESFLPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp -------------HHHTTSBGGGTCBCSCCCBCTTCCHHHHHH-HTTTSSEEEEECTTSBEEEEEEHHHHHHHHHHHSC
T ss_pred -------------ccccccCHHHhhcCCceecccccHHHHHHH-HHHHcCCeEEEecCCEEEEEEEHHHHHHHHHHHhc
Confidence 001246789999999999999999999999 555 779999998899999999999999876543
No 11
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.55 E-value=2.8e-14 Score=149.24 Aligned_cols=166 Identities=46% Similarity=0.706 Sum_probs=114.9
Q ss_pred CcchhhhcccccccccccccCCC-CeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhh
Q psy9748 806 LDSKEEFASTALASDVMQPKHSD-PLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKR 884 (1359)
Q Consensus 806 Ld~k~e~l~~~~V~DVMt~~~~~-pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~ 884 (1359)
|+++++.+...+|+|+|+++.+. ++.+.+++++++.++.++|.+++++++||++++++++++|+|+.+||...+.....
T Consensus 1 l~~~~~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~ 80 (185)
T 2j9l_A 1 MEAKEEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARK 80 (185)
T ss_dssp --------CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHT
T ss_pred CCchhhhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcc
Confidence 45677788899999999986321 12222389999999999999999999999943367899999999999988765322
Q ss_pred hccCCCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHH
Q psy9748 885 TLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGD 961 (1359)
Q Consensus 885 ~~~~~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrk 961 (1359)
........+.+.|..... ..........+++++|++.++++++++++.++++.|.+ +++||+| +|+++|+||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~ 157 (185)
T 2j9l_A 81 KQDGVVSTSIIYFTEHSP--PLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKK 157 (185)
T ss_dssp SCSCCCTTCEEECSSSCC--CCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHH
T ss_pred cCCCccccceeecccCCc--ccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHH
Confidence 222222333344432111 11111233567999999999999999999999994443 6799999 56999999999
Q ss_pred HHHHHHhhccCCC
Q psy9748 962 SIVRFVQNDTQPQ 974 (1359)
Q Consensus 962 DILr~l~~~~~~~ 974 (1359)
|+++++.+...++
T Consensus 158 dll~~l~~~~~~~ 170 (185)
T 2j9l_A 158 DVLKHIAQMANQD 170 (185)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHhhccc
Confidence 9999998765544
No 12
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.53 E-value=9.5e-15 Score=152.12 Aligned_cols=141 Identities=10% Similarity=0.105 Sum_probs=104.9
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhc-----
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTL----- 886 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~----- 886 (1359)
.+.+++|+|+|+++ ++++++++|+.++.++|.+++++++||+| ++++++|+|+.+|++.++.......
T Consensus 14 ~l~~~~V~diM~~~-----v~~v~~~~tl~~a~~~m~~~~~~~~pVvd--~~g~lvGiit~~Dll~~~~~~~~~~~~~~~ 86 (170)
T 4esy_A 14 AIRQVPIRDILTSP-----VVTVREDDTLDAVAKTMLEHQIGCAPVVD--QNGHLVGIITESDFLRGSIPFWIYEASEIL 86 (170)
T ss_dssp HHHTSBGGGGCCSC-----CCCEETTSBHHHHHHHHHHTTCSEEEEEC--TTSCEEEEEEGGGGGGGTCCTTHHHHHHHH
T ss_pred HHcCCCHHHhcCCC-----CcEECCcCcHHHHHHHHHHcCCeEEEEEc--CCccEEEEEEHHHHHHHHhhccccchhhhh
Confidence 45678899999986 35678999999999999999999999997 6789999999999976532110000
Q ss_pred cCCCC-ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHH
Q psy9748 887 EGLRG-DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDS 962 (1359)
Q Consensus 887 ~~~~~-~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkD 962 (1359)
..... ...-.+. .......++++|+++++++++++++.++++.|.+ +++||+|+| +++||||++|
T Consensus 87 ~~~~~~~~~~~~~----------~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g-~lvGivt~~D 155 (170)
T 4esy_A 87 SRAIPAPEVEHLF----------ETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDG-VPVGIVTRRD 155 (170)
T ss_dssp TTTSCHHHHHHHH----------HHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETT-EEEEEEEHHH
T ss_pred hhccchhhHHhhh----------ccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEECC-EEEEEEEHHH
Confidence 00000 0000000 0122467899999999999999999999994444 789999974 9999999999
Q ss_pred HHHHHhhc
Q psy9748 963 IVRFVQND 970 (1359)
Q Consensus 963 ILr~l~~~ 970 (1359)
+++++..+
T Consensus 156 il~~l~~~ 163 (170)
T 4esy_A 156 LLKLLLLE 163 (170)
T ss_dssp HTTTSCCC
T ss_pred HHHHHHhc
Confidence 99987543
No 13
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.53 E-value=1.1e-14 Score=144.52 Aligned_cols=122 Identities=17% Similarity=0.198 Sum_probs=100.1
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
+.+.+|+|+|+++.. ++.+++++|+.++.++|.+++++.+||++ ++ ++++|+|+.+||..++.+.
T Consensus 3 l~~~~v~~iM~~~~~---v~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~~Givt~~dl~~~~~~~--------- 68 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPV---VFRVDATMTINEFLDKHKDTPFSRPLVYS--EQKDNIIGFVHRLELFKMQQSG--------- 68 (130)
T ss_dssp ----CCTTTSCCBCC---CCEEETTSBHHHHHHHTTTCSCSCCEEES--SSTTCEEEECCHHHHHHHHHTT---------
T ss_pred cCcCCHhhCCCcHHH---EEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCCcEEEEEEHHHHHHHHhcC---------
Confidence 456789999998642 45678999999999999999999999997 44 7999999999999886431
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHH
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFV 967 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l 967 (1359)
....+++++|+ +++++++++++.++++ +|+ +++||+|++|+++|+||++|+++++
T Consensus 69 -------------------~~~~~v~~~m~-~~~~v~~~~~l~~~~~-~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 69 -------------------SGQKQLGAVMR-PIQVVLNNTALPKVFD-QMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp -------------------TTTSBHHHHSE-ECCEEETTSCHHHHHH-HHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred -------------------CCcCCHHHHhc-CCcCcCCCCcHHHHHH-HHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 11356889995 4889999999999999 555 6799999888999999999999987
Q ss_pred hh
Q psy9748 968 QN 969 (1359)
Q Consensus 968 ~~ 969 (1359)
.+
T Consensus 128 ~g 129 (130)
T 3i8n_A 128 VG 129 (130)
T ss_dssp HT
T ss_pred cC
Confidence 54
No 14
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.53 E-value=3.2e-14 Score=148.70 Aligned_cols=125 Identities=11% Similarity=0.126 Sum_probs=102.6
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
+...+|+|+|+++.+ ++++++++|+.++.++|.+++++++||++ ++ ++++|+|+.+||..++.+.
T Consensus 39 l~~~~v~diM~~~~~---~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~~~~--------- 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSD---IVFLDLNLPLDANLRTVMQSPHSRFPVCR--NNVDDMVGIISAKQLLSESIAG--------- 104 (172)
T ss_dssp ----CTTTTSEEGGG---CCCEETTSCHHHHHHHHHTCCCSEEEEES--SSTTSEEEEEEHHHHHHHHHTT---------
T ss_pred cCCCCHHHhCccHHH---eEEEcCCCCHHHHHHHHHhCCCCEEEEEe--CCCCeEEEEEEHHHHHHHHhhc---------
Confidence 456789999996532 35678999999999999999999999996 44 7899999999999886321
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHH
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFV 967 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l 967 (1359)
...+++++| ++++++++++++.++++ +|+ +++||+|++|+++|+||++|+++++
T Consensus 105 --------------------~~~~v~~im-~~~~~v~~~~~l~~a~~-~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 105 --------------------ERLELVDLV-KNCNFVPNSLSGMELLE-HFRTTGSQMVFVVDEYGDLKGLVTLQDMMDAL 162 (172)
T ss_dssp --------------------CCCCGGGGC-BCCEEEETTCCHHHHHH-HHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred --------------------CcccHHHHh-cCCeEeCCCCCHHHHHH-HHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHH
Confidence 135689999 88999999999999999 555 6799999888999999999999999
Q ss_pred hhccCC
Q psy9748 968 QNDTQP 973 (1359)
Q Consensus 968 ~~~~~~ 973 (1359)
.+...+
T Consensus 163 ~~~~~d 168 (172)
T 3lhh_A 163 TGEFFQ 168 (172)
T ss_dssp HTTCC-
T ss_pred hCCCcc
Confidence 765443
No 15
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=1.9e-14 Score=143.48 Aligned_cols=123 Identities=13% Similarity=0.076 Sum_probs=100.6
Q ss_pred ccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 816 ALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 816 ~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
.+|+|+|+++.+ ++++++++|++++.++|.+++++++||++ +++++++|+|+.+||..++.+..
T Consensus 2 ~~v~~iM~~~~~---~~~v~~~~~v~~a~~~m~~~~~~~~pVv~-~~~~~lvGivt~~dl~~~~~~~~------------ 65 (130)
T 3hf7_A 2 VSVNDIMVPRNE---IVGIDINDDWKSIVRQLTHSPHGRIVLYR-DSLDDAISMLRVREAYRLMTEKK------------ 65 (130)
T ss_dssp CBHHHHSEEGGG---CCEEETTSCHHHHHHHHHTCSSSEEEEES-SSGGGEEEEEEHHHHHHHHTSSS------------
T ss_pred cCHHHhCccHHH---EEEEcCCCCHHHHHHHHHHCCCCeEEEEc-CCCCcEEEEEEHHHHHHHHhccC------------
Confidence 579999987532 45678999999999999999999999995 23579999999999998863210
Q ss_pred ecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
......++++| ++|+++++++++.++++ +|+ +++||+|++|+++|+||++|+++++.++
T Consensus 66 --------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~-~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 66 --------------EFTKEIMLRAA-DEIYFVPEGTPLSTQLV-KFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp --------------CCCHHHHHHHS-BCCCEEETTCBHHHHHH-HHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred --------------ccchhhHHHhc-cCCeEeCCCCcHHHHHH-HHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 01235678889 66889999999999999 565 6799999888999999999999988653
No 16
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.53 E-value=5.8e-15 Score=148.13 Aligned_cols=125 Identities=15% Similarity=0.234 Sum_probs=99.2
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
+.+|+|+|+++.+ ++++++++|+.++.++|.+++++++||++ ++ ++++|+|+.+||..++.+.
T Consensus 2 ~~~v~~iM~~~~~---~~~v~~~~~v~~a~~~m~~~~~~~~pVvd--~~~~~~vGivt~~dl~~~~~~~----------- 65 (136)
T 3lfr_A 2 DLQVRDIMVPRSQ---MISIKATQTPREFLPAVIDAAHSRYPVIG--ESHDDVLGVLLAKDLLPLILKA----------- 65 (136)
T ss_dssp -CBHHHHSEEGGG---CCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGGGSS-----------
T ss_pred CCChHhccccHHH---EEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCCcEEEEEEHHHHHHHHHhc-----------
Confidence 4679999997532 35678999999999999999999999997 44 7999999999998765210
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
.....+++++|++ ++++++++++.++++ +|+ +++||+|++|+++|+||++|+++.+.+
T Consensus 66 ----------------~~~~~~v~~~m~~-~~~v~~~~~l~~~~~-~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 66 ----------------DGDSDDVKKLLRP-ATFVPESKRLNVLLR-EFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp ----------------SGGGCCGGGTCBC-CCEEETTCBHHHHHH-HHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--
T ss_pred ----------------cCCCcCHHHHcCC-CeEECCCCcHHHHHH-HHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 0123578899977 899999999999999 555 679999988899999999999998866
Q ss_pred ccCC
Q psy9748 970 DTQP 973 (1359)
Q Consensus 970 ~~~~ 973 (1359)
+..+
T Consensus 128 ~~~d 131 (136)
T 3lfr_A 128 DIED 131 (136)
T ss_dssp ----
T ss_pred CCcC
Confidence 4433
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.53 E-value=4.4e-14 Score=143.23 Aligned_cols=122 Identities=19% Similarity=0.259 Sum_probs=103.5
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
+...+|+|+|+++.+ ++.+++++|+.++.+.|.+++++++||++ ++ ++++|+|+.+||..++.+..
T Consensus 20 l~~~~v~diM~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~~~~~-------- 86 (148)
T 3lv9_A 20 FEEKKIREIMVPRTD---MVCIYESDSEEKILAILKEEGVTRYPVCR--KNKDDILGFVHIRDLYNQKINEN-------- 86 (148)
T ss_dssp GGTCBGGGTSEETTT---CCCEETTCCHHHHHHHHHHSCCSEEEEES--SSTTSEEEEEEHHHHHHHHHHHS--------
T ss_pred cCCCCHHHccccHHH---eEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCCcEEEEEEHHHHHHHHhcCC--------
Confidence 456889999998432 34678999999999999999999999996 44 79999999999998864321
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHH
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFV 967 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l 967 (1359)
..+++++| ++++++++++++.++++ +|+ +++||+|++|+++|+||++|+++++
T Consensus 87 ---------------------~~~v~~~m-~~~~~v~~~~~l~~~~~-~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 87 ---------------------KIELEEIL-RDIIYISENLTIDKALE-RIRKEKLQLAIVVDEYGGTSGVVTIEDILEEI 143 (148)
T ss_dssp ---------------------CCCGGGTC-BCCEEEETTSBHHHHHH-HHHHHTCSEEEEECTTSSEEEEEEHHHHHHHH
T ss_pred ---------------------CccHHHhc-CCCeEECCCCCHHHHHH-HHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 24688999 88999999999999999 555 6799999888999999999999998
Q ss_pred hhc
Q psy9748 968 QND 970 (1359)
Q Consensus 968 ~~~ 970 (1359)
.++
T Consensus 144 ~~~ 146 (148)
T 3lv9_A 144 VGE 146 (148)
T ss_dssp HHT
T ss_pred hCc
Confidence 653
No 18
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.52 E-value=2e-14 Score=146.87 Aligned_cols=128 Identities=14% Similarity=0.206 Sum_probs=103.4
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCc
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGD 892 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~ 892 (1359)
+.+.+|+|+|+++.+ ++++++++|+.++.++|.+++++++||++++++++++|+|+.+||..++....
T Consensus 17 l~~~~v~~iM~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~--------- 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTS---MSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD--------- 84 (153)
T ss_dssp HHHCBHHHHSEEGGG---CCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT---------
T ss_pred cCCCEeeeEecchhh---eEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC---------
Confidence 456789999997322 34678999999999999999999999993223479999999999998874321
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
..+++++| +.++++++++++.++++ +|. +++||+|++|+++|+||++|+++++.
T Consensus 85 --------------------~~~v~~~m-~~~~~v~~~~~l~~~~~-~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 --------------------KAKISTIM-RDIVSVPENMKVPDVME-EMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp --------------------TSBGGGTC-BCCEEEETTSBHHHHHH-HHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred --------------------CCcHHHHh-CCCeEECCCCCHHHHHH-HHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 24688999 88999999999999999 555 67999998889999999999999997
Q ss_pred hccCCC
Q psy9748 969 NDTQPQ 974 (1359)
Q Consensus 969 ~~~~~~ 974 (1359)
+...++
T Consensus 143 ~~~~de 148 (153)
T 3oco_A 143 GNLRDE 148 (153)
T ss_dssp C-----
T ss_pred ccCCCc
Confidence 654443
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.51 E-value=2.2e-14 Score=145.37 Aligned_cols=142 Identities=9% Similarity=0.071 Sum_probs=110.0
Q ss_pred CCcchhhhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhh
Q psy9748 805 FLDSKEEFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKR 884 (1359)
Q Consensus 805 fLd~k~e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~ 884 (1359)
+++...+.+...+|+|+|++..+ ++.+++++++.++.+.|.+++++.+||+| ++++++|+|+.+||..++.....
T Consensus 4 ~~~~~~~~l~~~~v~~im~~~~~---~~~v~~~~~l~~a~~~~~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~~~~~~ 78 (150)
T 3lqn_A 4 MISIPKDEFQQIFVKDLMISSEK---VAHVQIGNGLEHALLVLVKSGYSAIPVLD--PMYKLHGLISTAMILDGILGLER 78 (150)
T ss_dssp ----CHHHHHHCBHHHHSEEGGG---SCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHTBCSSS
T ss_pred HHHHHHHhhhcCChhhcccCCCc---eEEECCCCcHHHHHHHHHHcCCcEEEEEC--CCCCEEEEEEHHHHHHHHHhhcc
Confidence 44444556778999999997422 34678999999999999999999999997 57899999999999987631100
Q ss_pred hccCCCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc-ceeEEEcCCCcEEEEEeHHHH
Q psy9748 885 TLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT-KQLLFPANAKRTLEGLRGDSI 963 (1359)
Q Consensus 885 ~~~~~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr-R~LpVVdegGrLvGIITrkDI 963 (1359)
+ ........+++++|++.++++++++++.++++.|.+ +.+||+|++|+++|+||++|+
T Consensus 79 ------------~---------~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~l~Vvd~~g~~~Giit~~di 137 (150)
T 3lqn_A 79 ------------I---------EFERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPFICAVNEDGYFEGILTRRAI 137 (150)
T ss_dssp ------------B---------CGGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSEEEEECTTCBEEEEEEHHHH
T ss_pred ------------c---------chhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCEEEEECCCCcEEEEEEHHHH
Confidence 0 000123467899999999999999999999994444 669999988899999999999
Q ss_pred HHHHhhccC
Q psy9748 964 VRFVQNDTQ 972 (1359)
Q Consensus 964 Lr~l~~~~~ 972 (1359)
++++.+..+
T Consensus 138 l~~l~~~~~ 146 (150)
T 3lqn_A 138 LKLLNKKVR 146 (150)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhH
Confidence 999876543
No 20
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.51 E-value=2.5e-14 Score=142.08 Aligned_cols=122 Identities=16% Similarity=0.248 Sum_probs=98.9
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
.+.+|+|+|+|+.+ ++.++++++++++.++|.+++++++||+++ ++++++|+|+.+||..++.
T Consensus 3 ~~~~v~diM~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~~Givt~~dl~~~~~------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSR---MDLLDISQPLPQLLATIIETAHSRFPVYED-DRDNIIGILLAKDLLRYML------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGG---CCCEETTSCHHHHHHHHHHSCCSEEEEESS-STTCEEEEEEGGGGGGGGT-------------
T ss_pred CCCCHHHhCccHHH---eEEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCCcEEEEEEHHHHHhHhc-------------
Confidence 35789999997532 356789999999999999999999999962 2379999999999986541
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
....+++++|++ ++++++++++.++++.|.+ +++||+|++|+++|+||++|+++++.++
T Consensus 66 -----------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 66 -----------------EPALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp -----------------CTTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred -----------------cCCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 012457888865 8899999999999994444 6799999878999999999999998653
No 21
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.51 E-value=1.3e-14 Score=143.63 Aligned_cols=120 Identities=15% Similarity=0.315 Sum_probs=97.9
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
+.+|+|+|+++.+ ++.+++++|++++.++|.+++++++||++ ++ ++++|+|+.+||..++.+.
T Consensus 2 ~~~v~diM~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~vGivt~~dl~~~~~~~----------- 65 (127)
T 3nqr_A 2 DQRVRDIMIPRSQ---MITLKRNQTLDECLDVIIESAHSRFPVIS--EDKDHIEGILMAKDLLPFMRSD----------- 65 (127)
T ss_dssp -CBHHHHSEEGGG---CCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGGSTT-----------
T ss_pred CcCHHHhcccHHH---eEEEcCCCCHHHHHHHHHhCCCCEEEEEc--CCCCcEEEEEEHHHHHHHHhcc-----------
Confidence 4679999997532 34568999999999999999999999996 44 7999999999998764210
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
....+++++|++ ++++++++++.++++ +|+ +++||+|++|+++|+||++|+++++.+
T Consensus 66 -----------------~~~~~v~~~m~~-~~~v~~~~~l~~a~~-~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 66 -----------------AEAFSMDKVLRT-AVVVPESKRVDRMLK-EFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp -----------------CCCCCHHHHCBC-CCEEETTCBHHHHHH-HHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred -----------------CCCCCHHHHcCC-CeEECCCCcHHHHHH-HHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 123568899966 789999999999999 555 679999988899999999999998643
No 22
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.48 E-value=1.2e-13 Score=145.12 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=102.7
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCc
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGD 892 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~ 892 (1359)
+...+|+|+|+++.+ ++.+++++|+.++.++|.+++++++||+++ +.++++|+|+.+||..++.+..
T Consensus 33 l~~~~v~diM~~~~~---v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~lvGivt~~Dl~~~~~~~~--------- 99 (173)
T 3ocm_A 33 LAERSIRSIMTPRTD---VSWVNIDDDAATIRQQLTAAPHSFFPVCRG-SLDEVVGIGRAKDLVADLITEG--------- 99 (173)
T ss_dssp HTTSCSTTTSEEGGG---CCCEETTSCHHHHHHHHHHSSCSEEEEESS-STTSEEEEEEHHHHHHHHHHHS---------
T ss_pred cCCCCHHHhCCcHHH---eEEEeCCCCHHHHHHHHHhCCCCEEEEEeC-CCCCEEEEEEHHHHHHHHhcCC---------
Confidence 467889999997532 456789999999999999999999999962 2378999999999998864311
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
..+++ |.+++++|++++++.++++ +|+ +.+||+|++|+++||||++|+++.+.
T Consensus 100 --------------------~~~v~--~~~~~~~v~~~~~l~~al~-~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 100 --------------------RVRRN--RLRDPIIVHESIGILRLMD-TLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp --------------------SCCGG--GSBCCCEECGGGCHHHHHH-HHHHSTTCCEEEECTTCCEEEEECHHHHHHHHH
T ss_pred --------------------cchhH--hcCCCeEECCCCcHHHHHH-HHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHh
Confidence 13455 4467889999999999999 555 67899998889999999999999998
Q ss_pred hccCCC
Q psy9748 969 NDTQPQ 974 (1359)
Q Consensus 969 ~~~~~~ 974 (1359)
+...++
T Consensus 157 ~~i~de 162 (173)
T 3ocm_A 157 GEFPDE 162 (173)
T ss_dssp CCCCCT
T ss_pred CcCCCc
Confidence 755444
No 23
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.48 E-value=7.7e-14 Score=142.51 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=108.4
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
..+...+++|+|++..+ ++.+++++|+.++.++|.+++++.+||+| ++++++|+|+.+||...+......
T Consensus 10 ~~l~~~~v~dim~p~~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~~~~~Giit~~dl~~~~~~~~~~----- 79 (156)
T 3ctu_A 10 ETFLLGQEETFLTPAKN---LAVLIDTHNADHATLLLSQMTYTRVPVVT--DEKQFVGTIGLRDIMAYQMEHDLS----- 79 (156)
T ss_dssp HHHHHTTGGGGEEEGGG---CCCEETTSBHHHHHHHHTTCSSSEEEEEC--C-CBEEEEEEHHHHHHHHHHHTCC-----
T ss_pred HHHHHHHHHHHcCcccC---ceEECCCCCHHHHHHHHHHCCCceEeEEC--CCCEEEEEEcHHHHHHHHHhcccc-----
Confidence 34456679999997532 34578999999999999999999999997 578999999999999887542110
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc-ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT-KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr-R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
.......+++++|++.++++++++++.++++.|.+ +++||+|++|+++|+||++|+++++.+
T Consensus 80 -----------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 80 -----------------QEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDESFLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -----------------HHHHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSSEEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -----------------ccccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcCeEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 00012357899999999999999999999994444 789999988899999999999999977
Q ss_pred ccCC
Q psy9748 970 DTQP 973 (1359)
Q Consensus 970 ~~~~ 973 (1359)
..++
T Consensus 143 ~~~~ 146 (156)
T 3ctu_A 143 LLHD 146 (156)
T ss_dssp HSCC
T ss_pred HHHh
Confidence 5543
No 24
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.47 E-value=1.2e-13 Score=134.76 Aligned_cols=116 Identities=18% Similarity=0.347 Sum_probs=100.0
Q ss_pred ccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 816 ALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 816 ~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
++|+|+|+++ +..+++++++.++.+.|.+++++.+||++ ++++++|+|+.+||..++...
T Consensus 1 ~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~G~vt~~dl~~~~~~~------------- 60 (122)
T 3kpb_A 1 TLVKDILSKP-----PITAHSNISIMEAAKILIKHNINHLPIVD--EHGKLVGIITSWDIAKALAQN------------- 60 (122)
T ss_dssp CBHHHHCCSC-----CCCEETTSBHHHHHHHHHHHTCSCEEEEC--TTSBEEEEECHHHHHHHHHTT-------------
T ss_pred CchHHhhCCC-----CEEeCCCCcHHHHHHHHHHcCCCeEEEEC--CCCCEEEEEEHHHHHHHHHhc-------------
Confidence 3688999986 34568999999999999999999999997 678999999999999876421
Q ss_pred ecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
..+++++|++.++++++++++.++++ +|. +++||+|++|+++|+||++|+++++.+
T Consensus 61 -----------------~~~v~~~~~~~~~~v~~~~~l~~~~~-~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 61 -----------------KKTIEEIMTRNVITAHEDEPVDHVAI-KMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp -----------------CCBGGGTSBSSCCCEETTSBHHHHHH-HHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred -----------------ccCHHHHhcCCCeEECCCCCHHHHHH-HHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 12688999999999999999999999 555 679999997899999999999998854
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.47 E-value=3.1e-13 Score=133.93 Aligned_cols=123 Identities=15% Similarity=0.224 Sum_probs=103.3
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
.+.+|+|+|+++ +..+++++++.++.+.|.+++++.+||++ +++++|+|+.+||...+.+..
T Consensus 2 ~~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~Givt~~dl~~~~~~~~---------- 63 (133)
T 2ef7_A 2 EEEIVKEYMKTQ-----VISVTKDAKLNDIAKVMTEKNIGSVIVVD---GNKPVGIITERDIVKAIGKGK---------- 63 (133)
T ss_dssp CCCBGGGTSBCS-----CCEEETTCBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHHHTTC----------
T ss_pred CcccHHHhccCC-----CEEECCCCcHHHHHHHHHhcCCCEEEEEE---CCEEEEEEcHHHHHHHHhcCC----------
Confidence 467899999985 34568999999999999999999999997 579999999999987764211
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
....+++++|++.+.++++++++.++++.|.+ +++||+|++|+++|+||++|+++++.+.
T Consensus 64 -----------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 64 -----------------SLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp -----------------CTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred -----------------CcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 11356889999999999999999999994444 6799999878999999999999988765
Q ss_pred c
Q psy9748 971 T 971 (1359)
Q Consensus 971 ~ 971 (1359)
.
T Consensus 127 ~ 127 (133)
T 2ef7_A 127 F 127 (133)
T ss_dssp C
T ss_pred H
Confidence 4
No 26
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.46 E-value=3e-13 Score=139.05 Aligned_cols=130 Identities=12% Similarity=0.123 Sum_probs=108.3
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
+.+...+|+|+|++. + ++.+++++.++.++|.+++++.+||++ ++++++|+|+.+||..++....
T Consensus 12 ~~l~~~~v~~im~~~-----~-~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~------- 76 (159)
T 3fv6_A 12 DKLKKLQVKDFQSIP-----V-VIHENVSVYDAICTMFLEDVGTLFVVD--RDAVLVGVLSRKDLLRASIGQQ------- 76 (159)
T ss_dssp HHHTTCBGGGSCBCC-----C-EEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHTSCS-------
T ss_pred HHHhhCCHHHHcCCC-----E-EECCCCcHHHHHHHHHHCCCCEEEEEc--CCCcEEEEEeHHHHHHHhhccC-------
Confidence 456778999999862 2 578999999999999999999999997 5789999999999998762110
Q ss_pred CccceecccCCCCCCCCCCCCccccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCCC---cEEEEEeHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANAK---RTLEGLRGDS 962 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdegG---rLvGIITrkD 962 (1359)
.....+++++|++ .++++++++++.++++.|.+ +++||+|++| +++|+||++|
T Consensus 77 -------------------~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~d 137 (159)
T 3fv6_A 77 -------------------ELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTN 137 (159)
T ss_dssp -------------------CTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHH
T ss_pred -------------------cccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHH
Confidence 1234578999998 88999999999999994444 6799999988 9999999999
Q ss_pred HHHHHhhccCCC
Q psy9748 963 IVRFVQNDTQPQ 974 (1359)
Q Consensus 963 ILr~l~~~~~~~ 974 (1359)
+++++.+.....
T Consensus 138 il~~l~~~~~~~ 149 (159)
T 3fv6_A 138 MTKILVSLSENE 149 (159)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhhcc
Confidence 999998765544
No 27
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=2.4e-13 Score=140.65 Aligned_cols=132 Identities=11% Similarity=0.122 Sum_probs=107.5
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
..+..++|+|+|++..++ ++.+++++++.++.++|.+++++.+||++ ++++++|+|+.+||..++......
T Consensus 19 ~~l~~~~v~dim~~~~~~--~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~~~----- 89 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRD--VVTVGPDVSIGEAAGTLHAHKIGAVVVTD--ADGVVLGIFTERDLVKAVAGQGAA----- 89 (165)
T ss_dssp CSSSSCBHHHHHHHHCSC--CCEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHHHHHGGG-----
T ss_pred HhhhhcCHHHHhccCCCC--CeEECCCCCHHHHHHHHHHcCCCEEEEEc--CCCeEEEEEEHHHHHHHHHhcCCc-----
Confidence 356778999999973001 34678999999999999999999999997 678999999999999887543211
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFV 967 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l 967 (1359)
....+++++|.+.++++++++++.++++.|.+ +++||+|+ |+++|+||++|+++++
T Consensus 90 --------------------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~ 148 (165)
T 3fhm_A 90 --------------------SLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKAR 148 (165)
T ss_dssp --------------------GGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred --------------------cccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 12357899999999999999999999994444 67999999 7999999999999998
Q ss_pred hhccC
Q psy9748 968 QNDTQ 972 (1359)
Q Consensus 968 ~~~~~ 972 (1359)
.+...
T Consensus 149 ~~~~~ 153 (165)
T 3fhm_A 149 IGEIE 153 (165)
T ss_dssp TCC--
T ss_pred HHHHH
Confidence 66443
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.45 E-value=1.5e-13 Score=135.96 Aligned_cols=121 Identities=11% Similarity=-0.013 Sum_probs=101.1
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
.+.+++|+|+++. ..++++++++++.+.|.+++++.+||++ + ++++|+|+.+||..++.+.
T Consensus 3 ~s~~v~~~m~~~~-----~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~-~~~~Givt~~dl~~~~~~~----------- 63 (128)
T 3gby_A 3 ASVTFSYLAETDY-----PVFTLGGSTADAARRLAASGCACAPVLD--G-ERYLGMVHLSRLLEGRKGW----------- 63 (128)
T ss_dssp TTCBGGGGCBCCS-----CCEETTSBHHHHHHHHHHHTCSEEEEEE--T-TEEEEEEEHHHHHTTCSSS-----------
T ss_pred cceEHHHhhcCCc-----ceECCCCCHHHHHHHHHHCCCcEEEEEE--C-CEEEEEEEHHHHHHHHhhC-----------
Confidence 3578999999872 3567899999999999999999999998 4 8999999999998653110
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
.....+++++|++.+.++++++++.++++.|.+ +++||+|++|+++|+||++|+++++.+
T Consensus 64 ----------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 64 ----------------PTVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ----------------CCTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred ----------------CcccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 011256889999999999999999999994444 569999988899999999999998865
No 29
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.45 E-value=4.7e-13 Score=134.32 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=99.9
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCC--eEEEEEEhHHHHHHHHhhhhhccCCCCc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQ--YLVGFVLRRDLNLAIANAKRTLEGLRGD 892 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~--~LVG~Isr~DLl~aL~~~~~~~~~~~~~ 892 (1359)
..+|+|+|+++ ++.+++++++.++.++|.+++++.+||++ +++ +++|+|+++||...+.+..
T Consensus 4 ~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~~~Givt~~dl~~~~~~~~--------- 67 (141)
T 2rih_A 4 AIRTSELLKRP-----PVSLPETATIREVATELAKNRVGLAVLTA--RDNPKRPVAVVSERDILRAVAQRL--------- 67 (141)
T ss_dssp -CBGGGGCCSC-----CEEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEEEEHHHHHHHHHTTC---------
T ss_pred ceEHHHHhcCC-----CeEeCCCCcHHHHHHHHHHcCCCEEEEEc--CCCcceeEEEEEHHHHHHHHhcCC---------
Confidence 46799999975 35678999999999999999999999998 455 9999999999998764210
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
....+++++|.+.+++++++ ++.++++.|.+ +++||+|++|+++|+||++|+++++..
T Consensus 68 ------------------~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 68 ------------------DLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp ------------------CTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred ------------------CCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 11357889999999999999 99999994444 689999987899999999999876543
No 30
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.44 E-value=6.2e-13 Score=132.61 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=102.3
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHH-HHhhhhhccCCCC
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLA-IANAKRTLEGLRG 891 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~a-L~~~~~~~~~~~~ 891 (1359)
+...+|+|+|+++ +..+++++|+.++.+.|.+++++.+||++ ++++++|+|+.+||... +.+.
T Consensus 4 l~~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~--------- 67 (138)
T 2yzi_A 4 DMKAPIKVYMTKK-----LLGVKPSTSVQEASRLMMEFDVGSLVVIN--DDGNVVGFFTKSDIIRRVIVPG--------- 67 (138)
T ss_dssp CTTSBGGGTCBCC-----CCEECTTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHTTTTC---------
T ss_pred hhhhhHHHHhcCC-----CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHHHHhcC---------
Confidence 3467899999875 34678999999999999999999999997 57899999999999743 2110
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
.....+++++|++.++++++++++.++++.|.+ +++ |+|++|+++|+||++|+++++.
T Consensus 68 ------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~ 128 (138)
T 2yzi_A 68 ------------------LPYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASR 128 (138)
T ss_dssp ------------------CCTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHH
T ss_pred ------------------CcccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHH
Confidence 012357899999999999999999999994444 668 9997779999999999999987
Q ss_pred hccC
Q psy9748 969 NDTQ 972 (1359)
Q Consensus 969 ~~~~ 972 (1359)
+..+
T Consensus 129 ~~~~ 132 (138)
T 2yzi_A 129 RRLE 132 (138)
T ss_dssp CCSC
T ss_pred HHHH
Confidence 6543
No 31
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.44 E-value=1.8e-13 Score=151.77 Aligned_cols=165 Identities=13% Similarity=0.223 Sum_probs=130.8
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
+.+++++|+++ ++.+++++++.++.+.|.+++++++||+| ++++++|+++.+|+...+....
T Consensus 83 ~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~----------- 144 (280)
T 3kh5_A 83 NEPVREIMEEN-----VITLKENADIDEAIETFLTKNVGGAPIVN--DENQLISLITERDVIRALLDKI----------- 144 (280)
T ss_dssp TSBGGGTSBCS-----CCCEETTCBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHHHHHGGGS-----------
T ss_pred hhhHHHhcCCC-----CEEECCCCCHHHHHHHHHhCCCCEEEEEc--CCCEEEEEEEHHHHHHHHhhcC-----------
Confidence 46799999975 34568999999999999999999999997 5789999999999998763211
Q ss_pred eecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
....+++++|.+.++++++++++.++++ .|+ +++||++ +|+++|+||++|+++++...
T Consensus 145 ----------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~-~~~~~~~~~~~Vv~-~~~~~Givt~~dl~~~~~~~ 206 (280)
T 3kh5_A 145 ----------------DENEVIDDYITRDVIVATPGERLKDVAR-TMVRNGFRRLPVVS-EGRLVGIITSTDFIKLLGSD 206 (280)
T ss_dssp ----------------CTTCBSGGGCBCSCCCBCTTCBHHHHHH-HHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHTSH
T ss_pred ----------------CCCCCHHHHhCCCCeEECCCCcHHHHHH-HHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHhhh
Confidence 1124688999999999999999999999 555 6789994 55999999999999987532
Q ss_pred cCC----CCCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 971 TQP----QPLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 971 ~~~----~~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
... ..........++.++|...+.++++++++.++.+.|.+++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 255 (280)
T 3kh5_A 207 WAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIG 255 (280)
T ss_dssp HHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCC
T ss_pred hhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCC
Confidence 100 000000123467889999999999999999999999998764
No 32
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.43 E-value=9.3e-14 Score=156.44 Aligned_cols=165 Identities=12% Similarity=0.128 Sum_probs=132.4
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
+.+++++|+++ ++++.+++++.++.++|.+++++.+||+| ++++++|+|+.+|+...+...
T Consensus 92 ~~~v~~im~~~-----~~~v~~~~~~~~a~~~m~~~~~~~lpVvd--~~~~lvGivt~~dl~~~~~~~------------ 152 (296)
T 3ddj_A 92 TTPIIDYMTPN-----PVTVYNTSDEFTAINIMVTRNFGSLPVVD--INDKPVGIVTEREFLLLYKDL------------ 152 (296)
T ss_dssp TSBGGGTSEES-----CCCEETTSCHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHGGGGGGS------------
T ss_pred cccHHHhccCC-----CEEEcCCCCHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHhhhcc------------
Confidence 56799999986 34568999999999999999999999997 578999999999998764211
Q ss_pred eecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhcc
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDT 971 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~ 971 (1359)
.....++++|++.++++++++++.++++.|.+ +++||+|++|+++|+||++|+++.+.+..
T Consensus 153 ----------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~ 216 (296)
T 3ddj_A 153 ----------------DEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAV 216 (296)
T ss_dssp ----------------CCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred ----------------cccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHH
Confidence 12347899999999999999999999994444 67999998889999999999999876321
Q ss_pred CCCCCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 972 QPQPLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 972 ~~~~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.+... .......+.++|...+.++.+++++.++++.|.+++++
T Consensus 217 ~~~~~-~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 259 (296)
T 3ddj_A 217 DKLDP-DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIG 259 (296)
T ss_dssp HHTCT-HHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCS
T ss_pred hhcCh-hhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCC
Confidence 11000 01123467889999999999999999999999998754
No 33
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.43 E-value=7.7e-13 Score=135.56 Aligned_cols=139 Identities=10% Similarity=0.046 Sum_probs=104.9
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCe-EEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNG-FPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sg-fPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
.....+|+|+|+++ ++.+++++|+.|+.++|.+++++. +||+| ++ +++|+|+.+||..++.... . ...
T Consensus 12 ~~~~~~v~~im~~~-----~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd--~~-~~vGivt~~dl~~~~~~~~-~-~~~- 80 (157)
T 1o50_A 12 HMKVKDVCKLISLK-----PTVVEEDTPIEEIVDRILEDPVTRTVYVAR--DN-KLVGMIPVMHLLKVSGFHF-F-GFI- 80 (157)
T ss_dssp TCBHHHHTTSSCCC-----CEEECTTCBHHHHHHHHHHSTTCCEEEEEE--TT-EEEEEEEHHHHHHHHHHHH-H-CCC-
T ss_pred hhccccHhhcccCC-----CceECCCCCHHHHHHHHHhCCCCccEEEEE--CC-EEEEEEEHHHHHHHHhhhH-H-hhh-
Confidence 45567899999986 456789999999999999999999 99998 45 9999999999998764210 0 000
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFV 967 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l 967 (1359)
.....|.. ........+++++|++ ++++++++++.++++.|.+ +++||+|++|+++|+||++|+++++
T Consensus 81 -~~~~~~~~-------~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l 151 (157)
T 1o50_A 81 -PKEELIRS-------SMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLAL 151 (157)
T ss_dssp -C--------------CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred -ccHHHHHH-------HHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 00001110 0011234678999999 9999999999999994444 6799999777999999999999998
Q ss_pred hhc
Q psy9748 968 QND 970 (1359)
Q Consensus 968 ~~~ 970 (1359)
.+.
T Consensus 152 ~~~ 154 (157)
T 1o50_A 152 WKG 154 (157)
T ss_dssp HHS
T ss_pred HHh
Confidence 754
No 34
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.42 E-value=7.2e-13 Score=129.50 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=98.9
Q ss_pred ccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 816 ALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 816 ~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
++|+|+|+++ +..+++++++.++.++|.+++++.+||+| +++++|+|+.+|+...+.+...
T Consensus 1 m~v~~~m~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~G~it~~dl~~~~~~~~~----------- 61 (125)
T 1pbj_A 1 MRVEDVMVTD-----VDTIDITASLEDVLRNYVENAKGSSVVVK---EGVRVGIVTTWDVLEAIAEGDD----------- 61 (125)
T ss_dssp -CHHHHCBCS-----CCEEETTCBHHHHHHHHHHHCCCEEEEEE---TTEEEEEEEHHHHHHHHHHTCC-----------
T ss_pred CCHHHhcCCC-----ceEECCCCcHHHHHHHHHHcCCCEEEEEe---CCeeEEEEeHHHHHHHHhcCCc-----------
Confidence 3688999875 34568999999999999999999999997 6899999999999977643210
Q ss_pred ecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
....+++++|++.++++++++++.++++.|.+ +++||+|+ |+++|+||++|+++++.+
T Consensus 62 ---------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 62 ---------------LAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp ---------------TTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred ---------------ccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 12357899999999999999999999994444 67999999 799999999999998854
No 35
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.42 E-value=3.1e-13 Score=136.20 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=102.7
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
...+|+|+|+++.+ ++.+++++++.++.++|.+++++.+||++ ++++++|+|+++||...+.....
T Consensus 3 ~~~~v~~im~~~~~---~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~G~vt~~dl~~~~~~~~~--------- 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKED---LHVVKPTTTVDEALELLVENRITGFPVID--EDWKLVGLVSDYDLLALDSGDST--------- 68 (152)
T ss_dssp CCSBGGGTSEESTT---CCCBCTTSBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHTTCC----C---------
T ss_pred ceEEhhhccCCCCC---CeEECCCCcHHHHHHHHHHcCCceEEEEe--CCCeEEEEEEHHHHHHhhcccCc---------
Confidence 35789999998422 35678999999999999999999999997 56899999999999754321100
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
...|.... .........+++++|++.++++++++++.++++ +|. +++||+|++|+++|+||++|+++++.+
T Consensus 69 ~~~~~~~~----~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~-~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 69 WKTFNAVQ----KLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAK-ILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp CHHHHHHH----TC-----CCBHHHHSEESCCCEESSSBHHHHHH-HHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccchHHHH----HHHHHhccccHHHhcCCCceEECCCCcHHHHHH-HHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 00000000 000012346789999999999999999999999 555 679999987899999999999999876
Q ss_pred ccC
Q psy9748 970 DTQ 972 (1359)
Q Consensus 970 ~~~ 972 (1359)
...
T Consensus 144 ~~~ 146 (152)
T 4gqw_A 144 IKR 146 (152)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 36
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.41 E-value=7.7e-13 Score=131.74 Aligned_cols=124 Identities=14% Similarity=0.172 Sum_probs=101.3
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHH-HHHHHhhhhhccCCC
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDL-NLAIANAKRTLEGLR 890 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DL-l~aL~~~~~~~~~~~ 890 (1359)
.+.+.+++|+|+++ +..+++++++.++.++|.+++++.+||++ ++++++|+|+++|+ ...+...
T Consensus 4 ~l~~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~-------- 68 (138)
T 2p9m_A 4 TLKNIKVKDVMTKN-----VITAKRHEGVVEAFEKMLKYKISSLPVID--DENKVIGIVTTTDIGYNLIRDK-------- 68 (138)
T ss_dssp -CTTCBGGGTSBCS-----CCCEETTSBHHHHHHHHHHHTCCEEEEEC--TTCBEEEEEEHHHHHHHHTTTC--------
T ss_pred ccccCCHHHhhcCC-----ceEECCCCcHHHHHHHHHHCCCcEEEEEC--CCCeEEEEEEHHHHHHHHHhhc--------
Confidence 35578899999875 23567999999999999999999999997 56899999999999 7654210
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc-c-------eeEEEcCCCcEEEEEeHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT-K-------QLLFPANAKRTLEGLRGDS 962 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr-R-------~LpVVdegGrLvGIITrkD 962 (1359)
.....+++++|++.++++++++++.++++.|.+ + ++||+|++|+++|+||++|
T Consensus 69 -------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~d 129 (138)
T 2p9m_A 69 -------------------YTLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGD 129 (138)
T ss_dssp -------------------CCSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHH
T ss_pred -------------------ccCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHH
Confidence 012357899999999999999999999994443 5 5899997779999999999
Q ss_pred HHHHHhh
Q psy9748 963 IVRFVQN 969 (1359)
Q Consensus 963 ILr~l~~ 969 (1359)
+++++.+
T Consensus 130 ll~~~~~ 136 (138)
T 2p9m_A 130 IIRTISK 136 (138)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 37
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.41 E-value=5.8e-13 Score=136.35 Aligned_cols=130 Identities=20% Similarity=0.259 Sum_probs=102.0
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCc
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGD 892 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~ 892 (1359)
....+|+|+|+++ ++.+++++|+.++.++|.+++++.+||+|++++++++|+|+++||...+.......
T Consensus 10 ~~~~~v~dim~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~------ 78 (164)
T 2pfi_A 10 SHHVRVEHFMNHS-----ITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR------ 78 (164)
T ss_dssp CCSCBHHHHCBCC-----CCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-----------
T ss_pred ccCCCHHHHcCCC-----CeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc------
Confidence 3467899999985 34568999999999999999999999997323689999999999998764321100
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccC------CeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHH
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMA------PITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDS 962 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~s------PiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkD 962 (1359)
.......++++|++. ++++++++++.++++ +|. +++||+|+ |+++|+||++|
T Consensus 79 ----------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~-~m~~~~~~~lpVvd~-g~l~Giit~~d 140 (164)
T 2pfi_A 79 ----------------APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQN-LFKLLNLQSLFVTSR-GRAVGCVSWVE 140 (164)
T ss_dssp ------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHH-HHHHTTCSEEEEEET-TEEEEEEEHHH
T ss_pred ----------------CCcccchhhhhhcccccccCCceEECCCCcHHHHHH-HHHHhCCCEEEEEEC-CEEEEEEEHHH
Confidence 001234577888776 789999999999999 555 67999994 69999999999
Q ss_pred HHHHHhhcc
Q psy9748 963 IVRFVQNDT 971 (1359)
Q Consensus 963 ILr~l~~~~ 971 (1359)
+++++.+..
T Consensus 141 il~~~~~~~ 149 (164)
T 2pfi_A 141 MKKAISNLT 149 (164)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999987654
No 38
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.41 E-value=9.6e-13 Score=134.11 Aligned_cols=134 Identities=10% Similarity=0.077 Sum_probs=104.7
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
.+...+|+|+|++..+ ++.+++++|+.++.++|.+++++.+||++ ++++++|+|+.+||...+.....
T Consensus 7 ~l~~~~v~~im~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~~~~~~------- 74 (157)
T 2emq_A 7 EFMQMTVKPFLIPADK---VAHVQPGNYLDHALLVLTKTGYSAIPVLD--TSYKLHGLISMTMMMDAILGLER------- 74 (157)
T ss_dssp ---CCBSTTTCEEGGG---SCCBCTTSBHHHHHHHHHHSSSSEEEEEC--TTCCEEEEEEHHHHHHHSBCSSS-------
T ss_pred hHhhCcHHhhccCCcc---ceEECCCCcHHHHHHHHHHCCceEEEEEc--CCCCEEEEeeHHHHHHHHhcccc-------
Confidence 4567889999997211 34578999999999999999999999997 56899999999999876521100
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc--ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT--KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr--R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
+. ........++++|++.++++++++++.++++ +|. +.+||+|++|+++|+||++|+++++.+
T Consensus 75 -----~~---------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~-~m~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 75 -----IE---------FERLETMKVEEVMNRNIPRLRLDDSLMKAVG-LIVNHPFVCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp -----BC---------GGGGGTCBGGGTCBCCCCEEETTSBHHHHHH-HHHHSSEEEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred -----cc---------hHHhcCCcHHHHhCCCCceecCCCcHHHHHH-HHhhCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 00 0012245789999999999999999999999 555 569999987899999999999999876
Q ss_pred ccC
Q psy9748 970 DTQ 972 (1359)
Q Consensus 970 ~~~ 972 (1359)
...
T Consensus 140 ~~~ 142 (157)
T 2emq_A 140 QLH 142 (157)
T ss_dssp TTC
T ss_pred Hhh
Confidence 543
No 39
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.40 E-value=4.1e-13 Score=139.54 Aligned_cols=147 Identities=20% Similarity=0.227 Sum_probs=103.5
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
.++|+|+|+++.+ ++.+++++++.++.++|.+++++++||++ ++++++|+|+.+||...+....... ...
T Consensus 3 ~~~v~dim~~~~~---~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~~~~~~~~-----~~~ 72 (180)
T 3sl7_A 3 GYTVGDFMTPRQN---LHVVKPSTSVDDALELLVEKKVTGLPVID--DNWTLVGVVSDYDLLALDSISGRSQ-----NDT 72 (180)
T ss_dssp CCBHHHHSEEGGG---CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHTCC----------------
T ss_pred ceeHHHhcCCCCC---ceeeCCCCcHHHHHHHHHHcCCCeEEEEC--CCCeEEEEEEHHHHHhhhhhccccC-----Ccc
Confidence 3679999998422 35678999999999999999999999997 5789999999999985321110000 000
Q ss_pred eecccCCCCCCCC-------CCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHH
Q psy9748 895 VRFVQNDTQPQPL-------PGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIV 964 (1359)
Q Consensus 895 v~F~~~~~~p~~~-------~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDIL 964 (1359)
..+.... ..... .......+++++|++.++++++++++.++++.|.+ +++||+|++|+++|+||++|++
T Consensus 73 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil 151 (180)
T 3sl7_A 73 NLFPDVD-STWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVV 151 (180)
T ss_dssp ---------CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHH
T ss_pred ccccccc-chhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHH
Confidence 0000000 00000 00123457899999999999999999999994444 6799999888999999999999
Q ss_pred HHHhhccC
Q psy9748 965 RFVQNDTQ 972 (1359)
Q Consensus 965 r~l~~~~~ 972 (1359)
+++.+..+
T Consensus 152 ~~~~~~~~ 159 (180)
T 3sl7_A 152 RAALQIKR 159 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99876443
No 40
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.40 E-value=7.4e-13 Score=135.81 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=105.5
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
.+...+|+|+|+++.+ ++.+++++++.++.++|.+++++.+||+| ++++++|+|+.+||...+.....
T Consensus 10 ~l~~~~v~~im~~~~~---~~~v~~~~~l~~a~~~m~~~~~~~~pVvd--~~~~lvGivt~~dl~~~~~~~~~------- 77 (159)
T 1yav_A 10 QLLEATVGQFMIEADK---VAHVQVGNNLEHALLVLTKTGYTAIPVLD--PSYRLHGLIGTNMIMNSIFGLER------- 77 (159)
T ss_dssp -CTTCBHHHHSEEGGG---SCCEETTCBHHHHHHHHHHHCCSEEEEEC--TTCBEEEEEEHHHHHHHHBCSSS-------
T ss_pred HHhHhhHHHHhCCccc---eEEECCCCcHHHHHHHHHhCCCcEEEEEC--CCCCEEEEeEHHHHHHHhhhhcc-------
Confidence 3456889999998211 24567899999999999999999999997 56799999999999987632100
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc--ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT--KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr--R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
..+ ......+++++|++.++++++++++.++++ +|. +.+||+|++|+++|+||++|+++++.+
T Consensus 78 ---~~~-----------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~-~m~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 78 ---IEF-----------EKLDQITVEEVMLTDIPRLHINDPIMKGFG-MVINNGFVCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp ---BCG-----------GGTTTSBHHHHSBCSCCEEETTSBHHHHHH-HTTTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ---cch-----------hhhccCCHHHhcCCCCceEcCCCCHHHHHH-HHHhCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 000 002246789999999999999999999999 555 569999987899999999999999876
Q ss_pred ccCC
Q psy9748 970 DTQP 973 (1359)
Q Consensus 970 ~~~~ 973 (1359)
...+
T Consensus 143 ~~~~ 146 (159)
T 1yav_A 143 HIRS 146 (159)
T ss_dssp HC--
T ss_pred HHHh
Confidence 5443
No 41
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.40 E-value=9.6e-13 Score=135.57 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=102.4
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
..+|+|+|+++ ++.+++++|+.++.++|.+++++.+||+| ++++++|+|+.+||...+......
T Consensus 4 ~~~v~dim~~~-----~~~v~~~~tl~~a~~~m~~~~~~~~pVvd--~~~~lvGivt~~dl~~~~~~~~~~--------- 67 (160)
T 2o16_A 4 MIKVEDMMTRH-----PHTLLRTHTLNDAKHLMEALDIRHVPIVD--ANKKLLGIVSQRDLLAAQESSLQR--------- 67 (160)
T ss_dssp CCBGGGTSEES-----CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHHHHHCC----------
T ss_pred cCcHHHHhcCC-----CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHHHHHhhcc---------
Confidence 56799999985 34578999999999999999999999997 568999999999999876532100
Q ss_pred eecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
+. .........+++++|++.++++++++++.++++.|.+ +++||+|+ |+++|+||++|+++++.+
T Consensus 68 --~~-------~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 68 --SA-------QGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp -----------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred --cc-------cccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 00 0000123467899999999999999999999994444 67999999 699999999999998764
No 42
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.40 E-value=1.1e-12 Score=130.56 Aligned_cols=122 Identities=13% Similarity=0.097 Sum_probs=98.4
Q ss_pred cccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcccee
Q psy9748 817 LASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVR 896 (1359)
Q Consensus 817 ~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~ 896 (1359)
+|+|+|+++.++ +..+++++++.++.+.|.+++++.+||++ +++++|+|+.+||...+....
T Consensus 7 ~v~~im~~~~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~~~Givt~~dl~~~~~~~~------------- 68 (135)
T 2rc3_A 7 TVKHLLQEKGHT--VVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERDFSRKSYLLD------------- 68 (135)
T ss_dssp BHHHHHHHHCCC--CCEECTTSBHHHHHHHHHHHTCSEEEEEE---TTEEEEEEEHHHHHHHGGGSS-------------
T ss_pred eHHHHHhcCCCC--cEEECCCCcHHHHHHHHHhcCCCEEEEEE---CCEEEEEEehHHHHHHHHHcC-------------
Confidence 799999932111 34678999999999999999999999996 579999999999986432100
Q ss_pred cccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 897 FVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 897 F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
.......++++|++.++++++++++.++++ +|. +++||+| +|+++|+||++|+++++.+.
T Consensus 69 ------------~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~-~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 69 ------------KPVKDTQVKEIMTRQVAYVDLNNTNEDCMA-LITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp ------------SCGGGSBGGGTSBCSCCCBCTTCBHHHHHH-HHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred ------------CCcccCCHHHhccCCCeEECCCCcHHHHHH-HHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 002346789999999999999999999999 555 6899999 56999999999999988654
No 43
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.39 E-value=1.7e-13 Score=140.77 Aligned_cols=116 Identities=17% Similarity=0.271 Sum_probs=97.0
Q ss_pred cccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-CeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 813 ASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-QYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 813 l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
+.+.+|+|+|+++.+ ++.+++++++.++.++|.+++++++||++ ++ ++++|+|+.+||..++.+
T Consensus 35 l~~~~v~diM~~~~~---~~~v~~~~~i~~a~~~m~~~~~~~~pVvd--~~~~~lvGivt~~dl~~~~~~---------- 99 (156)
T 3oi8_A 35 FSDLEVRDAMITRSR---MNVLKENDSIERITAYVIDTAHSRFPVIG--EDKDEVLGILHAKDLLKYMFN---------- 99 (156)
T ss_dssp HTTCBGGGTCEEGGG---CCCEETTCCHHHHHHHHHHHCCSEEEEES--SSTTCEEEEEEGGGGGGGSSC----------
T ss_pred cCCCCHhheeeeHHH---eEEECCCCCHHHHHHHHHHCCCCEEEEEc--CCCCcEEEEEEHHHHHHHHHc----------
Confidence 467889999998432 34678999999999999999999999997 34 589999999999865411
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHH
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIV 964 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDIL 964 (1359)
....+++++|++ ++++++++++.++++ +|+ +++||+|++|+++|+||++|++
T Consensus 100 -------------------~~~~~v~~im~~-~~~v~~~~~l~~a~~-~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 100 -------------------PEQFHLKSILRP-AVFVPEGKSLTALLK-EFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp -------------------GGGCCHHHHCBC-CCEEETTSBHHHHHH-HHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred -------------------CCcccHHHHcCC-CEEECCCCCHHHHHH-HHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 023568899976 899999999999999 555 6799999888999999999986
No 44
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.39 E-value=9.1e-13 Score=142.49 Aligned_cols=122 Identities=16% Similarity=0.160 Sum_probs=102.6
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhc---CCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKET---EHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~---~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
...+|+++|+++ ++.+++++|++++.+.|.+. +++.+||++ ++++++|+|+.+||+..
T Consensus 52 ~~~~v~~iM~~~-----~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd--~~~~lvGivt~~dll~~------------ 112 (205)
T 3kxr_A 52 SENEIGRYTDHQ-----MLVLSDKATVAQAQRFFRRIELDCNDNLFIVD--EADKYLGTVRRYDIFKH------------ 112 (205)
T ss_dssp CTTCGGGGCBCC-----CCEEETTCBHHHHHHHHHHCCCTTCCEEEEEC--TTCBEEEEEEHHHHTTS------------
T ss_pred CcchHHhhccCc-----eEEECCCCcHHHHHHHHHhhCccCeeEEEEEc--CCCeEEEEEEHHHHHhC------------
Confidence 467899999986 45678999999999999986 678899997 67899999999998632
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRF 966 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~ 966 (1359)
....+++++|++.+++|+++++++++++ +|+ +.+||+|++|+++|+||++|+++.
T Consensus 113 --------------------~~~~~v~~im~~~~~~v~~~~~l~~a~~-~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~ 171 (205)
T 3kxr_A 113 --------------------EPHEPLISLLSEDSRALTANTTLLDAAE-AIEHSREIELPVIDDAGELIGRVTLRAATAL 171 (205)
T ss_dssp --------------------CTTSBGGGGCCSSCCCEETTSCHHHHHH-HHHTSSCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred --------------------CCcchHHHHhcCCCeEECCCCCHHHHHH-HHHhcCCCEEEEEcCCCeEEEEEEHHHHHHH
Confidence 1235689999999999999999999999 665 579999988899999999999999
Q ss_pred HhhccCCCC
Q psy9748 967 VQNDTQPQP 975 (1359)
Q Consensus 967 l~~~~~~~~ 975 (1359)
+.++..++.
T Consensus 172 i~~e~~ed~ 180 (205)
T 3kxr_A 172 VREHYEAQL 180 (205)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHHH
Confidence 987665543
No 45
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.39 E-value=1.7e-12 Score=143.96 Aligned_cols=171 Identities=12% Similarity=0.145 Sum_probs=128.5
Q ss_pred cccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecc
Q psy9748 819 SDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFV 898 (1359)
Q Consensus 819 ~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~ 898 (1359)
.++|+++ ++.+++++|+.|+.++|.+++++++||+++ ++++++|+++.+|+...+...... .+.
T Consensus 7 ~~i~~~~-----~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~-~~~~~~Givt~~di~~~~~~~~~~----------~~~ 70 (280)
T 3kh5_A 7 KIAQNKK-----IVTVYPTTTIRKALMTMNENKYRRLPVVNA-GNNKVVGIITSMDIVDFMGGGSKY----------NLI 70 (280)
T ss_dssp GTSCCSC-----CCCBCTTSBHHHHHHHHHHHCCCEEEEECT-TTCBEEEEEEHHHHHHHTTTSGGG----------HHH
T ss_pred HHhcCCC-----cEEECCCCcHHHHHHHHHhCCCcEeeEEEC-CCCeEEEEEEHHHHHHHhcccchh----------hhh
Confidence 4455554 457899999999999999999999999962 368999999999999876321110 000
Q ss_pred cCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCC
Q psy9748 899 QNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQP 975 (1359)
Q Consensus 899 ~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~ 975 (1359)
..... ..........++++|.++++++++++++.++++.|.+ +++||+|++|+++|+||.+|+++.+.+....
T Consensus 71 ~~~~~--~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~-- 146 (280)
T 3kh5_A 71 REKHE--RNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDE-- 146 (280)
T ss_dssp HTTST--TCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCT--
T ss_pred hhccc--cchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCC--
Confidence 00000 0000011357899999999999999999999994443 6799999888999999999999988654321
Q ss_pred CCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 976 LPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 976 ~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
..++.++|...+.++++++++.++.+.|.+++++
T Consensus 147 ------~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~ 180 (280)
T 3kh5_A 147 ------NEVIDDYITRDVIVATPGERLKDVARTMVRNGFR 180 (280)
T ss_dssp ------TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCS
T ss_pred ------CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCC
Confidence 2356788888899999999999999999998754
No 46
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.38 E-value=4.3e-13 Score=149.41 Aligned_cols=154 Identities=12% Similarity=0.156 Sum_probs=109.6
Q ss_pred ccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 816 ALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 816 ~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
++|+|+|+++ ++.+++++|+.++.++|.+++++++||++ ++++++|+|+.+|+...+.
T Consensus 1 m~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~pV~d--~~~~~~Giv~~~dl~~~~~--------------- 58 (282)
T 2yzq_A 1 MRVKTIMTQN-----PVTITLPATRNYALELFKKYKVRSFPVVN--KEGKLVGIISVKRILVNPD--------------- 58 (282)
T ss_dssp CBHHHHSEES-----CCCEESSCC------------CCEEEEEC--TTCCEEEEEESSCC--------------------
T ss_pred CchHHhccCC-----CeEECCCCcHHHHHHHHHHcCCCeEEEEc--CCCcEEEEEEHHHHHhhhc---------------
Confidence 3688999975 34568999999999999999999999997 4789999999999975431
Q ss_pred ecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHH-HHhhcc
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVR-FVQNDT 971 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr-~l~~~~ 971 (1359)
...++++|.+.++++++++++.++++.|.+ +.+||+|++|+++|+||++|+++ ++.+..
T Consensus 59 -----------------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~ 121 (282)
T 2yzq_A 59 -----------------EEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSE 121 (282)
T ss_dssp ----------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCS
T ss_pred -----------------cCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccC
Confidence 145778999889999999999999994444 67999998889999999999998 665320
Q ss_pred CCCCCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 972 QPQPLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 972 ~~~~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.....++.++|...++++++++++.++.+.|.+++++
T Consensus 122 -------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~ 158 (282)
T 2yzq_A 122 -------KYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSM 158 (282)
T ss_dssp -------GGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSS
T ss_pred -------CcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCc
Confidence 0112346678888899999999999999999988754
No 47
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.38 E-value=2.5e-12 Score=147.14 Aligned_cols=187 Identities=13% Similarity=0.090 Sum_probs=132.2
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhcc-CC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLE-GL 889 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~-~~ 889 (1359)
+++.+.+|+|+|+++.+ ++.+++++|+.++.+.|.+++++++||+++ +.++++|+|+.+|+...+........ ..
T Consensus 30 ~~l~~~~v~dim~p~~~---v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~-~~~~~vGivt~~Dll~~l~~~~~~~~~~~ 105 (330)
T 2v8q_E 30 TFMKSHRCYDLIPTSSK---LVVFDTSLQVKKAFFALVTNGVRAAPLWDS-KKQSFVGMLTITDFINILHRYYKSALVQI 105 (330)
T ss_dssp HHHHHSBGGGGSCSEEE---EEEEETTSBHHHHHHHHHHHTCSEEEEEET-TTTEEEEEEEHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHcCcHhhhccCCCc---EEEEeCCCcHHHHHHHHHHcCCcEEEEEeC-CCCeEEEEEEHHHHHHHHHHHHhccccch
Confidence 45677899999976543 677899999999999999999999999983 23789999999999987753211100 00
Q ss_pred CCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcC-CCcEEEEEeHHHHH
Q psy9748 890 RGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPAN-AKRTLEGLRGDSIV 964 (1359)
Q Consensus 890 ~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVde-gGrLvGIITrkDIL 964 (1359)
......... .-...++++|.+.++++++++++.++++ +|+ +++||+|+ +|+++|+||.+|++
T Consensus 106 ~~l~~~~~~------------~~~~~~~~im~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~ 172 (330)
T 2v8q_E 106 YELEEHKIE------------TWREVYLQDSFKPLVCISPNASLFDAVS-SLIRNKIHRLPVIDPESGNTLYILTHKRIL 172 (330)
T ss_dssp CCGGGCBHH------------HHHHHHSSSSCCCCCCBCTTSBHHHHHH-HHHHHTCSCEEEECTTTCCEEEEECHHHHH
T ss_pred hHHhhccHH------------HHHHHHhhcccCCceEeCCCCCHHHHHH-HHHHCCCCeEEEEeCCCCcEEEEEcHHHHH
Confidence 000000000 0001235678899999999999999999 554 67999997 77999999999999
Q ss_pred HHHhhccCCCCCCCCCCccccccc--cc-cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 965 RFVQNDTQPQPLPGAPPILRLDKI--LD-MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 965 r~l~~~~~~~~~~~~~~~~rv~~i--m~-~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+++.....+.+... .....+.++ +. ..+.++.+++++.++.+.|.+++++
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 225 (330)
T 2v8q_E 173 KFLKLFITEFPKPE-FMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVS 225 (330)
T ss_dssp HHHHHHSCSSSCCG-GGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCS
T ss_pred HHHHHHhhccCchh-hhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCC
Confidence 98865432221111 011223333 44 6788999999999999999988754
No 48
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.38 E-value=3.1e-13 Score=133.90 Aligned_cols=122 Identities=12% Similarity=0.224 Sum_probs=98.4
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHH-HHHhhhhhccCCCCc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNL-AIANAKRTLEGLRGD 892 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~-aL~~~~~~~~~~~~~ 892 (1359)
...+|+|+|+++ +..+++++|+.++.++|.+++++.+||+| ++++++|+|+.+||.. .+.+..
T Consensus 6 ~~~~v~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~~--------- 69 (133)
T 1y5h_A 6 TMTTARDIMNAG-----VTCVGEHETLTAAAQYMREHDIGALPICG--DDDRLHGMLTDRDIVIKGLAAGL--------- 69 (133)
T ss_dssp --CCHHHHSEET-----CCCEETTSBHHHHHHHHHHHTCSEEEEEC--GGGBEEEEEEHHHHHHTTGGGTC---------
T ss_pred hhcCHHHHhcCC-----ceEeCCCCCHHHHHHHHHHhCCCeEEEEC--CCCeEEEEEeHHHHHHHHHhcCC---------
Confidence 346899999875 23567999999999999999999999997 4689999999999984 432100
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
.....+++++|++.++++++++++.++++.|.+ +++||+|+ |+++|+||++|+++++.+
T Consensus 70 -----------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 70 -----------------DPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -----------------CTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred -----------------CccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 012357899999999999999999999994444 68999998 699999999999997643
No 49
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.38 E-value=1.5e-12 Score=130.08 Aligned_cols=123 Identities=17% Similarity=0.182 Sum_probs=98.4
Q ss_pred ccccccc---cccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 814 STALASD---VMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 814 ~~~~V~D---VMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
.+.++++ +|+++ ++.+++++++.++.++|.+++++.+||++ ++++++|+|+.+||...+.....
T Consensus 6 ~~~~v~~~~~~~~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~~------ 72 (144)
T 2nyc_A 6 LKIPIGDLNIITQDN-----MKSCQMTTPVIDVIQMLTQGRVSSVPIID--ENGYLINVYEAYDVLGLIKGGIY------ 72 (144)
T ss_dssp GGSBGGGSSCCBCSS-----CCCBCTTSBHHHHHHHHHHHTCSEEEEEC--TTCBEEEEEEHHHHHHHHHTC--------
T ss_pred hhcchhhcCCCCCCC-----ceEECCCCcHHHHHHHHHHcCcceeeEEc--CCCcEEEEEcHHHHHHHhccccc------
Confidence 4556777 77754 34678999999999999999999999997 56899999999999987642100
Q ss_pred CccceecccCCCCCCCCCCCCccccccccccc------CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDM------APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRG 960 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~------sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITr 960 (1359)
.....+++++|.+ .++++++++++.++++ +|. +++||+|++|+++|+||+
T Consensus 73 -------------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~-~m~~~~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 73 -------------------NDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMD-NIRKARVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp ---------------------CCSBHHHHHHHCC------CEECTTSBHHHHHH-HHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred -------------------ccCCccHHHHHhcCccccCCCeEECCCCcHHHHHH-HHHHCCCCEEEEECCCCCEEEEEEH
Confidence 0123568888876 5789999999999999 555 689999987899999999
Q ss_pred HHHHHHHhh
Q psy9748 961 DSIVRFVQN 969 (1359)
Q Consensus 961 kDILr~l~~ 969 (1359)
+|+++++.+
T Consensus 133 ~dil~~l~~ 141 (144)
T 2nyc_A 133 SDILKYILL 141 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998865
No 50
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.38 E-value=1.4e-12 Score=132.42 Aligned_cols=119 Identities=11% Similarity=0.076 Sum_probs=99.3
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
..+|+|+|++..+ ++.+++++|+.++.++|.+++++.+||++ ++++++|+|+.+||..++.+..
T Consensus 27 ~~~v~dim~~~~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd--~~~~~~Givt~~dl~~~~~~~~----------- 90 (149)
T 3k2v_A 27 LLRVNDIMHTGDE---IPHVGLQATLRDALLEITRKNLGMTAICD--DDMNIIGIFTDGDLRRVFDTGV----------- 90 (149)
T ss_dssp TSBGGGTSBCGGG---SCEECTTCBHHHHHHHHHHHTSSEEEEEC--TTCBEEEEEEHHHHHHHHCSSS-----------
T ss_pred ccCHHHHhcCCCC---CeEECCCCcHHHHHHHHHhCCCcEEEEEC--CCCcEEEEecHHHHHHHHhcCC-----------
Confidence 3589999998221 34678999999999999999999999997 5789999999999998763210
Q ss_pred eecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHH
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVR 965 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr 965 (1359)
.....+++++|++.++++++++++.++++.|.+ +++||+|++ +++|+||++|+++
T Consensus 91 ---------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 91 ---------------DMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp ---------------CCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred ---------------CcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 013467899999999999999999999994444 679999988 9999999999975
No 51
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.36 E-value=1.7e-12 Score=132.59 Aligned_cols=127 Identities=15% Similarity=0.180 Sum_probs=102.8
Q ss_pred ccccccccccC---CCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCc
Q psy9748 816 ALASDVMQPKH---SDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGD 892 (1359)
Q Consensus 816 ~~V~DVMt~~~---~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~ 892 (1359)
.+|+|+|++++ + + ++.+++++++.++.++|.+++++.+||+ ++++++|+|+.+||..++.....
T Consensus 7 ~~v~dim~~~~~~~~-~-~~~v~~~~~~~~a~~~~~~~~~~~~~V~---~~~~~~Givt~~dl~~~~~~~~~-------- 73 (157)
T 4fry_A 7 TTVAQILKAKPDSGR-T-IYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVTERDYARKVVLQER-------- 73 (157)
T ss_dssp CBHHHHHHHSTTTTC-C-CCEEETTSBHHHHHHHHHHHTCSEEEEE---SSSSEEEEEEHHHHHHHSGGGTC--------
T ss_pred HHHHHHHhcccccCC-C-CeEECCCCcHHHHHHHHHHcCCCEEEEe---eCCEEEEEEEHHHHHHHHHhccC--------
Confidence 46999999762 2 1 3457899999999999999999999995 37899999999999987632110
Q ss_pred cceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 893 SIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 893 s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
......++++|++.++++++++++.++++.|.+ +++||+| +|+++|+||++|+++++.+
T Consensus 74 -----------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 74 -----------------SSKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp -----------------CSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred -----------------CccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 012467899999999999999999999994443 6799999 4699999999999999976
Q ss_pred ccCC
Q psy9748 970 DTQP 973 (1359)
Q Consensus 970 ~~~~ 973 (1359)
...+
T Consensus 136 ~~~~ 139 (157)
T 4fry_A 136 DQQF 139 (157)
T ss_dssp TCCC
T ss_pred HHHh
Confidence 5543
No 52
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.34 E-value=2.1e-12 Score=136.08 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=101.5
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
..+|+|+|+++ ++.+++++++.++.++|.+++++.+||++ ++++++|+|+.+||...+....
T Consensus 8 ~~~v~~im~~~-----~~~v~~~~~l~ea~~~~~~~~~~~~pVvd--~~g~~vGivt~~dl~~~~~~~~----------- 69 (184)
T 1pvm_A 8 FMRVEKIMNSN-----FKTVNWNTTVFDAVKIMNENHLYGLVVKD--DNGNDVGLLSERSIIKRFIPRN----------- 69 (184)
T ss_dssp CCBGGGTSBTT-----CCEEETTCBHHHHHHHHHHHTCCEEEEEC--TTSCEEEEEEHHHHHHHTGGGC-----------
T ss_pred ccCHHHhcCCC-----CeEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCcEEEEEeHHHHHHHHhhcc-----------
Confidence 36899999875 34578999999999999999999999997 5689999999999987653210
Q ss_pred eecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
......+++++|++.++++++++++.++++.|.+ +++||+|++|+++|+||++|+++++.+
T Consensus 70 --------------~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 70 --------------KKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp --------------CCGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred --------------cCcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 0123457899999999999999999999994444 679999987799999999999986643
No 53
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.32 E-value=4e-12 Score=129.50 Aligned_cols=125 Identities=11% Similarity=0.055 Sum_probs=99.6
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
+.+.+.+++|+ ++ ++.+++++++.++.++|.+++++.+||+| ++++++|+|+.+||...+.....
T Consensus 18 ~~l~~~~v~~~--~~-----~~~v~~~~~~~~a~~~m~~~~~~~~pVvd--~~~~~vGivt~~dl~~~~~~~~~------ 82 (152)
T 2uv4_A 18 KSLEELQIGTY--AN-----IAMVRTTTPVYVALGIFVQHRVSALPVVD--EKGRVVDIYSKFDVINLAAEKTY------ 82 (152)
T ss_dssp SBHHHHTCSBC--SS-----CCCEETTCBHHHHHHHHHHHCCSEEEEEC--TTSBEEEEEEHHHHHHHHHCSSC------
T ss_pred hhHHHccCCcc--CC-----ceEeCCCCcHHHHHHHHHHcCCceEeEEC--CCCcEEEEEeHHHHHHHhcchhh------
Confidence 45667888888 32 23567999999999999999999999997 56899999999999887642100
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccc------cCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILD------MAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGD 961 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd------~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrk 961 (1359)
.....+++++|+ +.++++++++++.++++.|.+ +++||+|++|+++|+||++
T Consensus 83 -------------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~ 143 (152)
T 2uv4_A 83 -------------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLS 143 (152)
T ss_dssp -------------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHH
T ss_pred -------------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHH
Confidence 011245778886 788999999999999994444 6799999878999999999
Q ss_pred HHHHHHhh
Q psy9748 962 SIVRFVQN 969 (1359)
Q Consensus 962 DILr~l~~ 969 (1359)
|+++++.+
T Consensus 144 dil~~l~~ 151 (152)
T 2uv4_A 144 DILQALVL 151 (152)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99998743
No 54
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.32 E-value=6.5e-12 Score=143.82 Aligned_cols=181 Identities=16% Similarity=0.163 Sum_probs=130.4
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
+++.+.+|+|+|+++.+ ++.+++++|+.++.+.|.+++++++||+++ +.++++|+|+.+|+...+....... ..
T Consensus 17 ~~l~~~~v~dim~~~~~---vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~-~~~~~vGiv~~~Dl~~~~~~~~~~~--~~ 90 (334)
T 2qrd_G 17 AFIRSRTSYDVLPTSFR---LIVFDVTLFVKTSLSLLTLNNIVSAPLWDS-EANKFAGLLTMADFVNVIKYYYQSS--SF 90 (334)
T ss_dssp HHHHHSBGGGGSCSEEE---EEEEETTSBHHHHHHHHHHHTCSCEEEEET-TTTEEEEEECHHHHHHHHHHHHHHC--SC
T ss_pred HHHhcCchhhhCCCCCC---EEEEcCCCCHHHHHHHHHHcCCeEEEEEeC-CCCeEEEEEEHHHHHHHHHHHhhcc--CC
Confidence 34667899999998753 677899999999999999999999999972 3379999999999998764321100 00
Q ss_pred CccceecccCCCCCCCCCCCCccccc-------ccccccCC--eEecCCCCHHHHHHHhhc---ceeEEEcCCC-c----
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRL-------DKILDMAP--ITITDQTPMETVCGHTFT---KQLLFPANAK-R---- 953 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL-------~~iMd~sP--iTV~~~tpLeeVle~mFr---R~LpVVdegG-r---- 953 (1359)
.+ .+.. ....++ +++|.+++ +++++++++.++++.|.+ +++||+|++| +
T Consensus 91 ~~---~~~~-----------~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~ 156 (334)
T 2qrd_G 91 PE---AIAE-----------IDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEM 156 (334)
T ss_dssp GG---GGGG-----------GGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEE
T ss_pred cc---HHHH-----------HhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccc
Confidence 00 0000 001122 33466667 899999999999994433 6799998754 4
Q ss_pred EEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc---ccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 954 TLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK---ILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 954 LvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~---im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
++|+||.+|+++++.....+. .. ...++.+ +|...+.++.+++++.++.+.|.+++++
T Consensus 157 ~~Givt~~dl~~~~~~~~~~~-~~---~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~ 217 (334)
T 2qrd_G 157 IVSVLTQYRILKFISMNCKET-AM---LRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNIS 217 (334)
T ss_dssp EEEEEEHHHHHHHHHHHCGGG-GG---CCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred eEEEeeHHHHHHHHHhhccch-hh---hhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCc
Confidence 999999999999886432111 00 1133455 5788899999999999999999988743
No 55
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.32 E-value=3.8e-12 Score=141.75 Aligned_cols=169 Identities=12% Similarity=0.099 Sum_probs=124.4
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHH-HHHhhhhhccCCCCcc
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNL-AIANAKRTLEGLRGDS 893 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~-aL~~~~~~~~~~~~~s 893 (1359)
+.+++++|.++ ...+++++++.++.+.|.+++.+.+||++ ++++++|+|+++|+.. .+....
T Consensus 59 ~~~v~~~m~~~-----~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd--~~~~~~Giit~~di~~~~~~~~~---------- 121 (282)
T 2yzq_A 59 EEQLAMLVKRD-----VPVVKENDTLKKAAKLMLEYDYRRVVVVD--SKGKPVGILTVGDIIRRYFAKSE---------- 121 (282)
T ss_dssp -----CCCBSC-----CCEEETTSBHHHHHHHHHHHTCSEEEEEC--TTSCEEEEEEHHHHHHHTTTTCS----------
T ss_pred cCCHHHHcCCC-----CcEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCEEEEEEEHHHHHHHHHhccC----------
Confidence 56789999875 23567999999999999999999999997 5679999999999987 542110
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHH------
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIV------ 964 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDIL------ 964 (1359)
.....+++++|++.++++++++++.++++.|.+ +++||+|++|+++|+||.+|++
T Consensus 122 ----------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~ 185 (282)
T 2yzq_A 122 ----------------KYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIV 185 (282)
T ss_dssp ----------------GGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGC
T ss_pred ----------------CcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhh
Confidence 012346788999999999999999999994444 5799999878999999999999
Q ss_pred HHHhh------c--------cCCC---CCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 965 RFVQN------D--------TQPQ---PLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 965 r~l~~------~--------~~~~---~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
+++.. . .... .........++.++|...+.++.+++++.++++.|.+++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~ 254 (282)
T 2yzq_A 186 RIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQ 254 (282)
T ss_dssp C--------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSE
T ss_pred hhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcce
Confidence 54420 0 0000 000111345688999999999999999999999999987644
No 56
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.32 E-value=3.6e-12 Score=138.12 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=99.3
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcc
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDS 893 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s 893 (1359)
...+++++|+++ ++.+++++|+.|+.++|.+++++++||+| ++++++|+|+.+|+...+
T Consensus 11 ~~~~~~~~~~~~-----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~l~Givt~~dl~~~~-------------- 69 (213)
T 1vr9_A 11 HHMKVKKWVTQD-----FPMVEESATVRECLHRMRQYQTNECIVKD--REGHFRGVVNKEDLLDLD-------------- 69 (213)
T ss_dssp --CBGGGGCBSC-----SCEEETTCBHHHHHHHHHHTTSSEEEEEC--TTSBEEEEEEGGGGTTSC--------------
T ss_pred cccCHHHhhcCC-----CeEECCCCcHHHHHHHHHHCCCCEEEEEc--CCCEEEEEEEHHHHHhhc--------------
Confidence 345689999986 24568999999999999999999999997 568999999999986432
Q ss_pred ceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 894 IVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 894 ~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
....++++|++.+++++++++++++++.|.+ +++||+|++|+++|+||++|+++.+...
T Consensus 70 ------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 70 ------------------LDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp ------------------TTSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS
T ss_pred ------------------CCCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 1246889999999999999999999994444 6799999877999999999999988653
Q ss_pred cCCCCCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 971 TQPQPLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 971 ~~~~~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
..... .. .+. .+.+.....+++++.+.|.++++..
T Consensus 132 ~~~~~---~~--~~l------~~~~~~~~~~l~~~~~~l~~~~~~~ 166 (213)
T 1vr9_A 132 LAMDV---PG--IRF------SVLLEDKPGELRKVVDALALSNINI 166 (213)
T ss_dssp CC--------------------------------------------
T ss_pred hcCCC---Cc--EEE------EEEeCCCCccHHHHHHHHHHCCCcE
Confidence 32110 00 000 0111122345888999998887655
No 57
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.30 E-value=6.9e-12 Score=153.91 Aligned_cols=146 Identities=14% Similarity=0.151 Sum_probs=116.1
Q ss_pred chhhhhccCCCCCcch-hhhcccccccccccccCCCCeEEEeCCC-CCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEE
Q psy9748 794 YDAHIMLNAYPFLDSK-EEFASTALASDVMQPKHSDPLSVLTQDS-MTVQDVETLLKETEHNGFPVVVSRESQYLVGFVL 871 (1359)
Q Consensus 794 Yd~~I~lng~PfLd~k-~e~l~~~~V~DVMt~~~~~pLvviv~~~-~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Is 871 (1359)
++.++..+++...... .......+|+|+|+++ ++++.++ +|+.|+.++|.+++++.+||+| +++++++|+|+
T Consensus 361 ~~~~l~~rg~~~~~~~~~~~l~~~~V~diM~~~-----~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd-~~~g~lvGiVt 434 (527)
T 3pc3_A 361 SDNWMEARNFKEPVNEHGHWWWSLAIAELELPA-----PPVILKSDATVGEAIALMKKHRVDQLPVVD-QDDGSVLGVVG 434 (527)
T ss_dssp SHHHHHHTTSSCCCCTTCCTTTTSBGGGGCCCC-----CSCCEETTCBHHHHHHHHHHHTCSEEEEEC-TTTCCEEEEEE
T ss_pred cHHHHHhcCCccccccccccccCCcHHHhCcCC-----CeEEcCCCCcHHHHHHHHHHcCCCeEEEEE-CCCCEEEEEEE
Confidence 3556666666554433 2356678999999976 3456677 9999999999999999999996 23678999999
Q ss_pred hHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc--ceeEEEc
Q psy9748 872 RRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT--KQLLFPA 949 (1359)
Q Consensus 872 r~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr--R~LpVVd 949 (1359)
.+||+.++..... ....+++++|++.+++|++++++.++++ +|+ +.+||+|
T Consensus 435 ~~Dll~~l~~~~~--------------------------~~~~~V~~im~~~~~~v~~~~~l~~a~~-~m~~~~~~pVVd 487 (527)
T 3pc3_A 435 QETLITQIVSMNR--------------------------QQSDPAIKALNKRVIRLNESEILGKLAR-VLEVDPSVLILG 487 (527)
T ss_dssp HHHHHHHHHHHCC--------------------------CTTSBGGGGEETTCCEEETTSBHHHHHH-HHTTCSEEEEEE
T ss_pred HHHHHHHHHhccC--------------------------cCCCcHHHHhcCCCeEECCCCcHHHHHH-HHhhCCEEEEEe
Confidence 9999988754211 1235789999999999999999999999 556 6679998
Q ss_pred C----CCcEEEEEeHHHHHHHHhhccC
Q psy9748 950 N----AKRTLEGLRGDSIVRFVQNDTQ 972 (1359)
Q Consensus 950 e----gGrLvGIITrkDILr~l~~~~~ 972 (1359)
+ +|+++||||++||++++.+...
T Consensus 488 ~~~~~~g~lvGIVT~~Dll~~l~~~~~ 514 (527)
T 3pc3_A 488 KNPAGKVELKALATKLDVTTFIAAGKQ 514 (527)
T ss_dssp ECSSSCEEEEEEEEHHHHHHHHHTCCC
T ss_pred CCcccCCeEEEEEEHHHHHHHHHhccc
Confidence 8 3799999999999999976543
No 58
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.29 E-value=4.9e-12 Score=144.17 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=124.5
Q ss_pred ccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC-C--eEEEEEEhHHHHHHHHhhhhhccCCCCccc
Q psy9748 818 ASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES-Q--YLVGFVLRRDLNLAIANAKRTLEGLRGDSI 894 (1359)
Q Consensus 818 V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d-~--~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~ 894 (1359)
+.++|+++ ++.+++++++.++.+.|.+++++.+||+++++. + +++|+|+.+|+...+.......
T Consensus 116 ~~~~~~~~-----~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~-------- 182 (323)
T 3t4n_C 116 ALGVDQLD-----TASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRET-------- 182 (323)
T ss_dssp HTTC---------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGG--------
T ss_pred HhCCCCCC-----ceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCch--------
Confidence 45566664 346789999999999999999999999985321 1 4999999999998875321100
Q ss_pred eecccCCCCCCCCCCCCcccccccc---cccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 895 VRFVQNDTQPQPLPGAPPILRLDKI---LDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 895 v~F~~~~~~p~~~~~~~~~idL~~i---Md~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
.....+++++ |.+.++++++++++.++++.|-+ +++||+|++|+++|+||++|+++++.
T Consensus 183 ---------------~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 183 ---------------HFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 247 (323)
T ss_dssp ---------------GGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHH
T ss_pred ---------------hhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHh
Confidence 0112457777 88899999999999999994443 67999998889999999999999886
Q ss_pred hccCCCCCCCCCCcccccccccc------ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 969 NDTQPQPLPGAPPILRLDKILDM------APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 969 ~~~~~~~~~~~~~~~rv~~im~~------~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+...++ ....+.++|.. .+.++.+++++.++++.|.+++++
T Consensus 248 ~~~~~~------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 294 (323)
T 3t4n_C 248 GGIYND------LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVH 294 (323)
T ss_dssp TTHHHH------TTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCC
T ss_pred hchhhh------ccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCC
Confidence 432111 12356777877 789999999999999999999865
No 59
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.29 E-value=7.3e-12 Score=140.98 Aligned_cols=170 Identities=11% Similarity=0.086 Sum_probs=132.9
Q ss_pred hcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCC
Q psy9748 812 FASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRG 891 (1359)
Q Consensus 812 ~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~ 891 (1359)
.....+|+|+|+++ ++.+++++++.++.+.|.+++++.+||++ ++++|+++.+|+...+.......
T Consensus 16 ~~~~~~V~dim~~~-----~~~v~~~~~v~~a~~~m~~~~~~~~~V~d----~~l~GivT~~Di~~~~~~~~~~~----- 81 (296)
T 3ddj_A 16 YFQGMNIETLMIKN-----PPILSKEDRLGSAFKKINEGGIGRIIVAN----EKIEGLLTTRDLLSTVESYCKDS----- 81 (296)
T ss_dssp TTCCSSGGGTCEES-----CCEECTTSBHHHHHHHTTGGGCCEEEEES----SSEEEEEEHHHHHGGGTTCC--------
T ss_pred hhcccCHHHhccCC-----CcEECCCccHHHHHHHHHHCCCceEEEEC----CeEEEEEeHHHHHHHhccccccc-----
Confidence 34567899999986 34679999999999999999999999995 78999999999998763211000
Q ss_pred ccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 892 DSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 892 ~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
...-.|. ......++++|.+.++++++++++.++++.|.+ +++||+|++|+++|+||.+|+++.+.
T Consensus 82 ~~~~~~~-----------~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~ 150 (296)
T 3ddj_A 82 CSQGDLY-----------HISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYK 150 (296)
T ss_dssp CCHHHHH-----------HHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGG
T ss_pred ccchhhH-----------HHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhh
Confidence 0000000 011356899999999999999999999994444 67999998889999999999998764
Q ss_pred hccCCCCCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 969 NDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 969 ~~~~~~~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
... ...++.++|...+.++.+++++.++.+.|.+++++
T Consensus 151 ~~~---------~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~ 188 (296)
T 3ddj_A 151 DLD---------EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFR 188 (296)
T ss_dssp GSC---------CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCS
T ss_pred ccc---------ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCC
Confidence 322 12367888988999999999999999999998753
No 60
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.28 E-value=1.2e-11 Score=141.06 Aligned_cols=187 Identities=14% Similarity=0.180 Sum_probs=132.4
Q ss_pred hhcccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCC
Q psy9748 811 EFASTALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLR 890 (1359)
Q Consensus 811 e~l~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~ 890 (1359)
+++.+.++.|+|+++.+ ++.++.++|+.++.+.|.+++++.+||+++ +.++++|+++.+|+...+..........
T Consensus 25 ~~l~~~~~~d~m~~~~~---~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~-~~~~lvGilt~~Dl~~~l~~~~~~~~~~- 99 (323)
T 3t4n_C 25 KFLNSKTSYDVLPVSYR---LIVLDTSLLVKKSLNVLLQNSIVSAPLWDS-KTSRFAGLLTTTDFINVIQYYFSNPDKF- 99 (323)
T ss_dssp HHHHHSBHHHHSCSEEE---EEEEETTSBHHHHHHHHHHTTCSCEEEEET-TTTEEEEEECHHHHHHHHHHHHHCGGGG-
T ss_pred HHHHhCchHhhCCCCCc---EEEEcCCCcHHHHHHHHHHcCCceEEEEeC-CCCeEEEEEEHHHHHHHHHHHHcCcchh-
Confidence 45678899999999864 678899999999999999999999999973 3469999999999998775322110000
Q ss_pred CccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCc-----EEEEEeHHH
Q psy9748 891 GDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKR-----TLEGLRGDS 962 (1359)
Q Consensus 891 ~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGr-----LvGIITrkD 962 (1359)
+..-.+.. ..-.......++|.+.++++++++++.++++.|.+ +++||+|++++ ++|+||.+|
T Consensus 100 -~~l~~~~~--------~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~d 170 (323)
T 3t4n_C 100 -ELVDKLQL--------DGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYR 170 (323)
T ss_dssp -GGGGGCBH--------HHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHH
T ss_pred -HHHHHHHH--------HHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHH
Confidence 00000000 00000112334567889999999999999995544 78999998765 999999999
Q ss_pred HHHHHhhccCCCCCCCCCCccccccc---cccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 963 IVRFVQNDTQPQPLPGAPPILRLDKI---LDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 963 ILr~l~~~~~~~~~~~~~~~~rv~~i---m~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+++++....... .....++.++ |...+.++.+++++.++.+.|.+++++
T Consensus 171 i~~~l~~~~~~~----~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~ 222 (323)
T 3t4n_C 171 ILKFVALNCRET----HFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVS 222 (323)
T ss_dssp HHHHHHHHCGGG----GGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred HHHHHHhcCCch----hhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCC
Confidence 999886443221 1112345666 888899999999999999999988754
No 61
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.26 E-value=1.4e-11 Score=138.72 Aligned_cols=120 Identities=23% Similarity=0.282 Sum_probs=98.8
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhc-----CCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccC
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKET-----EHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEG 888 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~-----~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~ 888 (1359)
...+|+++|+++ ++.+++++|++++.+.+.++ +++.+||++ ++++++|+|+.+|+...
T Consensus 133 ~~~~v~~iM~~~-----~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd--~~~~lvGivt~~dll~~---------- 195 (278)
T 2yvy_A 133 EEDEAGGLMTPE-----YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD--EKGRLKGVLSLRDLIVA---------- 195 (278)
T ss_dssp CTTBGGGTCBSC-----CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEEC--TTCBEEEEEEHHHHHHS----------
T ss_pred CcchHHhhcCCC-----ceEECCCCcHHHHHHHHHHccCCccceeEEEEEC--CCCCEEEEEEHHHHhcC----------
Confidence 356799999986 45678999999999999987 679999997 56899999999999743
Q ss_pred CCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHH
Q psy9748 889 LRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIV 964 (1359)
Q Consensus 889 ~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDIL 964 (1359)
....+++++|++.+++|++++++.++++ +|+ +.+||+|++|+++|+||++|++
T Consensus 196 ----------------------~~~~~v~~im~~~~~~v~~~~~l~~a~~-~m~~~~~~~lpVvd~~g~lvGivT~~Dil 252 (278)
T 2yvy_A 196 ----------------------DPRTRVAEIMNPKVVYVRTDTDQEEVAR-LMADYDFTVLPVVDEEGRLVGIVTVDDVL 252 (278)
T ss_dssp ----------------------CTTCBSTTTSBSSCCCEETTSBHHHHHH-HHHHHTCSEEEEECTTSBEEEEEEHHHHH
T ss_pred ----------------------CCCCcHHHHhCCCCeEEeCCCCHHHHHH-HHHhcCCCEEEEEeCCCeEEEEEEHHHHH
Confidence 1125688999999999999999999999 666 6799999888999999999999
Q ss_pred HHHhhccCC
Q psy9748 965 RFVQNDTQP 973 (1359)
Q Consensus 965 r~l~~~~~~ 973 (1359)
+.+.+...+
T Consensus 253 ~~i~~e~~e 261 (278)
T 2yvy_A 253 DVLEAEATE 261 (278)
T ss_dssp HHC------
T ss_pred HHHHHHhHH
Confidence 988765443
No 62
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.25 E-value=8.8e-12 Score=141.39 Aligned_cols=121 Identities=20% Similarity=0.184 Sum_probs=102.5
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhc-----CCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccC
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKET-----EHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEG 888 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~-----~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~ 888 (1359)
...+|+++|+++ ++.+++++|++++.+.|.++ +++.+||++ ++++++|+|+.+||..+
T Consensus 135 ~~~~v~~iM~~~-----~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd--~~~~lvGivt~~dll~~---------- 197 (286)
T 2oux_A 135 EDETAGAIMTTE-----FVSIVANQTVRSAMYVLKNQADMAETIYYVYVVD--QENHLVGVISLRDLIVN---------- 197 (286)
T ss_dssp CTTBHHHHCBSC-----CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEEC--TTCBEEEEEEHHHHTTS----------
T ss_pred ChHHHHHhCCCC-----ceEECCCCcHHHHHHHHHHcccCccceeEEEEEc--CCCeEEEEEEHHHHHcC----------
Confidence 356899999986 45678999999999999987 788899997 57899999999998642
Q ss_pred CCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHH
Q psy9748 889 LRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIV 964 (1359)
Q Consensus 889 ~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDIL 964 (1359)
.....++++|++.+++|+++++++++++ +|+ +++||+|++|+++|+||++|++
T Consensus 198 ----------------------~~~~~v~~im~~~~~~v~~~~~l~ea~~-~m~~~~~~~lpVVd~~g~lvGiIT~~Dil 254 (286)
T 2oux_A 198 ----------------------DDDTLIADILNERVISVHVGDDQEDVAQ-TIRDYDFLAVPVTDYDDHLLGIVTVDDII 254 (286)
T ss_dssp ----------------------CTTSBHHHHSBSCCCCEETTSBHHHHHH-HHHHHTCSEEEEECTTCBEEEEEEHHHHH
T ss_pred ----------------------CCCCcHHHHcCCCCeeecCCCCHHHHHH-HHHHcCCcEEEEEcCCCeEEEEEEHHHHH
Confidence 1135789999999999999999999999 665 6799999888999999999999
Q ss_pred HHHhhccCCC
Q psy9748 965 RFVQNDTQPQ 974 (1359)
Q Consensus 965 r~l~~~~~~~ 974 (1359)
+.+.+...++
T Consensus 255 ~~i~~e~~ed 264 (286)
T 2oux_A 255 DVIDDEAASD 264 (286)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHhHHH
Confidence 9987665443
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.22 E-value=1.9e-11 Score=139.89 Aligned_cols=166 Identities=10% Similarity=0.051 Sum_probs=123.6
Q ss_pred cccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CCeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 817 LASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRE-SQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 817 ~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~-d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
.++++|+++ ++.+++++++.++.++|.+++++.+||++ + +++++|+|+.+|+...+......
T Consensus 119 ~~~~im~~~-----~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~~~Givt~~dl~~~~~~~~~~---------- 181 (330)
T 2v8q_E 119 VYLQDSFKP-----LVCISPNASLFDAVSSLIRNKIHRLPVID--PESGNTLYILTHKRILKFLKLFITE---------- 181 (330)
T ss_dssp HHSSSSCCC-----CCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTCCEEEEECHHHHHHHHHHHSCS----------
T ss_pred HHhhcccCC-----ceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCCcEEEEEcHHHHHHHHHHHhhc----------
Confidence 356889875 34678999999999999999999999997 4 68999999999999877432110
Q ss_pred ecccCCCCCCCCCCCCcccccccc--cc-cCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDKI--LD-MAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~i--Md-~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
.+. .......++++ |+ +.++++++++++.++++.|.+ +++||+|++|+++|+||++|+++.+..
T Consensus 182 -------~~~---~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~ 251 (330)
T 2v8q_E 182 -------FPK---PEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE 251 (330)
T ss_dssp -------SSC---CGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGS
T ss_pred -------cCc---hhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhc
Confidence 000 00011234444 55 678899999999999994443 679999987899999999999987654
Q ss_pred ccCCCCCCCCCCcccccccc------ccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 970 DTQPQPLPGAPPILRLDKIL------DMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 970 ~~~~~~~~~~~~~~rv~~im------~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
..... ...++.+.| ...+.++.++++++++++.|.+++++
T Consensus 252 ~~~~~------~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~ 297 (330)
T 2v8q_E 252 KTYNN------LDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVH 297 (330)
T ss_dssp SCCCC------CSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCS
T ss_pred ccccc------ccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCc
Confidence 32111 013445555 57889999999999999999998854
No 64
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.19 E-value=2.9e-11 Score=133.07 Aligned_cols=147 Identities=8% Similarity=0.107 Sum_probs=97.7
Q ss_pred cccccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhc----cCCC
Q psy9748 815 TALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTL----EGLR 890 (1359)
Q Consensus 815 ~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~----~~~~ 890 (1359)
..+|+|+|+++ +..+++++++.++.++|.+++++.+||+| ++++++|+|+.+|+..++....... ....
T Consensus 6 ~~~v~~im~~~-----~~~v~~~~~~~~a~~~m~~~~~~~lpVvd--~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~ 78 (245)
T 3l2b_A 6 KLKVEDLEMDK-----IAPLAPEVSLKMAWNIMRDKNLKSIPVAD--GNNHLLGMLSTSNITATYMDIWDSNILAKSATS 78 (245)
T ss_dssp CCBGGGSCCBC-----CCCBCTTCBHHHHHHHHHHTTCSEEEEEC--TTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCC
T ss_pred cCcHHHhcCCC-----CcEECCCCcHHHHHHHHHHcCCCEEEEEc--CCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCC
Confidence 46799999876 34678999999999999999999999997 5689999999999998875321100 0000
Q ss_pred C-------ccceecccCC-----------------------------------------------------CCCC-----
Q psy9748 891 G-------DSIVRFVQND-----------------------------------------------------TQPQ----- 905 (1359)
Q Consensus 891 ~-------~s~v~F~~~~-----------------------------------------------------~~p~----- 905 (1359)
. ...+...... ..+.
T Consensus 79 ~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~ 158 (245)
T 3l2b_A 79 LDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIE 158 (245)
T ss_dssp HHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHH
T ss_pred HHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHH
Confidence 0 0000000000 0000
Q ss_pred ------------CCC------CCCcccccccccc-cCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHH
Q psy9748 906 ------------PLP------GAPPILRLDKILD-MAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSI 963 (1359)
Q Consensus 906 ------------~~~------~~~~~idL~~iMd-~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDI 963 (1359)
..+ .......++++|+ +.+++++++++++++++.|.+ +++||+|++|+++|+||++|+
T Consensus 159 ~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl 238 (245)
T 3l2b_A 159 LAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHL 238 (245)
T ss_dssp HHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC--
T ss_pred HHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHh
Confidence 000 0012356889999 899999999999999994444 679999988899999999999
Q ss_pred HHHHh
Q psy9748 964 VRFVQ 968 (1359)
Q Consensus 964 Lr~l~ 968 (1359)
+++..
T Consensus 239 l~~~~ 243 (245)
T 3l2b_A 239 ISTHK 243 (245)
T ss_dssp -----
T ss_pred hchhh
Confidence 98753
No 65
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.16 E-value=7.8e-11 Score=142.76 Aligned_cols=118 Identities=23% Similarity=0.288 Sum_probs=101.5
Q ss_pred ccccccccccccCCCCeEEEeCCCCCHHHHHHHHHhc-----CCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccC
Q psy9748 814 STALASDVMQPKHSDPLSVLTQDSMTVQDVETLLKET-----EHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEG 888 (1359)
Q Consensus 814 ~~~~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~-----~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~ 888 (1359)
.+.+|+++|+++ ++.+++++|++|+.+.++++ +++.+||+| ++++++|+|+.+|+...
T Consensus 153 ~~~~v~~iM~~~-----~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd--~~~~lvGiVt~~Dll~~---------- 215 (473)
T 2zy9_A 153 EEDEAGGLMTPE-----YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVD--EKGRLKGVLSLRDLIVA---------- 215 (473)
T ss_dssp CTTBSTTTCBSC-----EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEEC--TTSBEEEEEEHHHHHHS----------
T ss_pred CCCCHHHhCCCC-----ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEEC--CCCcEEEEEEHHHHhcC----------
Confidence 456799999986 67789999999999999986 468999997 56899999999999752
Q ss_pred CCCccceecccCCCCCCCCCCCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHH
Q psy9748 889 LRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIV 964 (1359)
Q Consensus 889 ~~~~s~v~F~~~~~~p~~~~~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDIL 964 (1359)
....+++++|++++++++++++++++.+ +|+ +.+||+|++|+++|+||++|++
T Consensus 216 ----------------------~~~~~v~dim~~~~~~v~~~~~l~ea~~-~m~~~~~~~lpVVDe~g~lvGiIT~~Dil 272 (473)
T 2zy9_A 216 ----------------------DPRTRVAEIMNPKVVYVRTDTDQEEVAR-LMADYDFTVLPVVDEEGRLVGIVTVDDVL 272 (473)
T ss_dssp ----------------------CTTSBGGGTSBSSCCCEESSSBHHHHHH-HHHHHTCSEEEEECTTSBEEEEEEHHHHH
T ss_pred ----------------------CCCCcHHHHhCCCCeEEeCCCcHHHHHH-HHHhcCCcEEEEEcCCCEEEEEEehHhhH
Confidence 1125789999999999999999999999 666 6799999888999999999999
Q ss_pred HHHhhcc
Q psy9748 965 RFVQNDT 971 (1359)
Q Consensus 965 r~l~~~~ 971 (1359)
+.+.++.
T Consensus 273 ~~i~~e~ 279 (473)
T 2zy9_A 273 DVLEAEA 279 (473)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9886643
No 66
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.15 E-value=1.9e-10 Score=131.56 Aligned_cols=165 Identities=9% Similarity=0.051 Sum_probs=123.5
Q ss_pred cccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCC---CeEEEEEEhHHHHHHHHhhhhhccCCCCccce
Q psy9748 819 SDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRES---QYLVGFVLRRDLNLAIANAKRTLEGLRGDSIV 895 (1359)
Q Consensus 819 ~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d---~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v 895 (1359)
+++|.++.+ ++.+.+++++.++.+.|.+++++.+||+++++. +.++|+|+.+|+...+.......
T Consensus 110 ~~im~~~~~---~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~--------- 177 (334)
T 2qrd_G 110 RKIGAIPPE---TIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKET--------- 177 (334)
T ss_dssp HHHTCSCSS---CCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGG---------
T ss_pred HhhccCCCc---eeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccch---------
Confidence 456765421 245789999999999999999999999984211 22999999999998875321100
Q ss_pred ecccCCCCCCCCCCCCccccccc---ccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 896 RFVQNDTQPQPLPGAPPILRLDK---ILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 896 ~F~~~~~~p~~~~~~~~~idL~~---iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
. .....+++ +|.+.++++++++++.++++.|.+ +++||+|++|+++|+||++|+++.+.+
T Consensus 178 --~------------~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 178 --A------------MLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp --G------------GCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTT
T ss_pred --h------------hhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhc
Confidence 0 01234556 588999999999999999994433 679999987899999999999998754
Q ss_pred ccCCCCCCCCCCcccccccccc------ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 970 DTQPQPLPGAPPILRLDKILDM------APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 970 ~~~~~~~~~~~~~~rv~~im~~------~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.... .....+.++|.. .+.++.+++++.++.+.|.+++++
T Consensus 244 ~~~~------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 289 (334)
T 2qrd_G 244 GDYS------NLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVH 289 (334)
T ss_dssp SCGG------GGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCC
T ss_pred cccc------cccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCC
Confidence 2211 112356677774 789999999999999999999864
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.14 E-value=5.2e-12 Score=153.70 Aligned_cols=160 Identities=17% Similarity=0.236 Sum_probs=107.5
Q ss_pred hcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCcc----h---hhhcccccccccccccCCCCeEEEeCC
Q psy9748 764 LTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLDS----K---EEFASTALASDVMQPKHSDPLSVLTQD 836 (1359)
Q Consensus 764 lTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd~----k---~e~l~~~~V~DVMt~~~~~pLvviv~~ 836 (1359)
+|+++.+-+|++.+.|-+ .....+...+-+..|..++.. + +....-.+++++|+++ .+.+++
T Consensus 36 lt~~i~l~iPivsa~Mdt------VTe~~ma~a~a~~GGiGvI~~n~s~e~qa~~V~~Vk~~~~~m~~d-----~v~v~~ 104 (496)
T 4fxs_A 36 LTKNIALNIPMVSASMDT------VTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVVTH-----PVTVRP 104 (496)
T ss_dssp EETTEEESSSEEECCCTT------TCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHHCCC--CBC-----CCCBCS
T ss_pred eccccccCCCceecCcch------hhHHHHHHHHHHcCCcceecCCCCHHHHHHHHHhccccccccccC-----ceEECC
Confidence 567778888888765522 222223333333444444321 1 1222234578899976 346789
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCCCccccc
Q psy9748 837 SMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 916 (1359)
Q Consensus 837 ~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~~~~idL 916 (1359)
++|++|+.++|.+++++++||++ ++++++|+|+.+||... . ....++
T Consensus 105 ~~tv~ea~~~m~~~~~s~~PVvd--~~~~lvGiVt~rDL~~~------~-------------------------~~~~~v 151 (496)
T 4fxs_A 105 EQTIADVMELTHYHGFAGFPVVT--ENNELVGIITGRDVRFV------T-------------------------DLTKSV 151 (496)
T ss_dssp SSBHHHHHHHHTSSCCCEEEEEC--SSSBEEEEEEHHHHTTC------C-------------------------CTTSBG
T ss_pred CCCHHHHHHHHHHcCCcEEEEEc--cCCEEEEEEEHHHHhhc------c-------------------------cCCCcH
Confidence 99999999999999999999997 46899999999999521 0 123578
Q ss_pred ccccc-c-CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 917 DKILD-M-APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 917 ~~iMd-~-sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
+++|+ + ++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++...
T Consensus 152 ~diM~p~~~~vtv~~~~~l~ea~~-~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 152 AAVMTPKERLATVKEGATGAEVQE-KMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp GGTSEEGGGCCEEECC----CGGG-TCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred HHHhcCCCCCEEECCCCCHHHHHH-HHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 99999 4 5899999999999999 776 67999999999999999999998753
No 68
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.09 E-value=2.9e-10 Score=138.91 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=96.7
Q ss_pred cccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcccee
Q psy9748 817 LASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVR 896 (1359)
Q Consensus 817 ~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~ 896 (1359)
+.+++|.++ .+.+++++|++|+.++|.+++++++||+++..+++++|+|+.+||+.. .
T Consensus 114 ~~~~~m~~d-----~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~------~----------- 171 (511)
T 3usb_A 114 RSESGVISD-----PFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI------Q----------- 171 (511)
T ss_dssp TSSSCSSSS-----CCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC------C-----------
T ss_pred ccccccccC-----CEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh------c-----------
Confidence 355667665 246789999999999999999999999973226899999999999531 0
Q ss_pred cccCCCCCCCCCCCCccccccccccc-CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 897 FVQNDTQPQPLPGAPPILRLDKILDM-APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 897 F~~~~~~p~~~~~~~~~idL~~iMd~-sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
....+++++|++ ++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++.+..
T Consensus 172 --------------~~~~~V~~vM~~~~~vtv~~~~~l~eal~-~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 172 --------------DYSIKISDVMTKEQLITAPVGTTLSEAEK-ILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp --------------CSSSBHHHHCCCCCCCCEETTCCHHHHHH-HHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred --------------cCCCcHHHhcccCCCEEECCCCCHHHHHH-HHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 123578999998 8999999999999999 555 679999999999999999999998864
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.07 E-value=1.1e-11 Score=151.20 Aligned_cols=198 Identities=14% Similarity=0.095 Sum_probs=37.1
Q ss_pred CcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCc----ch--hhhccccccccc-ccccCCCCeEEEeCCCCC
Q psy9748 767 GVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLD----SK--EEFASTALASDV-MQPKHSDPLSVLTQDSMT 839 (1359)
Q Consensus 767 ~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd----~k--~e~l~~~~V~DV-Mt~~~~~pLvviv~~~~T 839 (1359)
++.+.+|+|.+.|.+. ....+...+.+..+..+++ .+ .+........++ |+++ ++.+++++|
T Consensus 47 ~i~l~iP~vsa~m~~v------t~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~~e~gM~~~-----~~~v~~~~t 115 (503)
T 1me8_A 47 EINLKIPLVSAIMQSV------SGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVVS-----DSNVKPDQT 115 (503)
T ss_dssp SCEESSSEEECSCTTT------CSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTTTC-------------------
T ss_pred ceeecCceEeccchhh------hHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhhcccCcccC-----CeEECCCCc
Confidence 7888999887654321 1111222222333332222 11 123445556666 9885 456789999
Q ss_pred HHHHHHHHHhcCCCeEEEEEeC-CCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCCCccccccc
Q psy9748 840 VQDVETLLKETEHNGFPVVVSR-ESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 918 (1359)
Q Consensus 840 V~el~~lL~~~~~sgfPVVds~-~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~~~~idL~~ 918 (1359)
++|+.++|.+++++++||+|++ ..++++|+|+.+||+.. . . ....++++
T Consensus 116 v~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~--~--------------------------~~~~~V~d 165 (503)
T 1me8_A 116 FADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L--T--------------------------QTETKVSD 165 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h--c--------------------------cccCcHHH
Confidence 9999999999999999999731 02799999999999853 0 0 12356889
Q ss_pred ccccC--CeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccccc
Q psy9748 919 ILDMA--PITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMA 992 (1359)
Q Consensus 919 iMd~s--PiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~~ 992 (1359)
+|++. +++++++++++++++ +|+ +.+||+|++|+++|+||++|+++.+....... +. ....+.
T Consensus 166 iM~~~~~~~tv~~~~sl~ea~~-~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~~---d~-----~~~l~v-- 234 (503)
T 1me8_A 166 MMTPFSKLVTAHQDTKLSEANK-IIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELV---DS-----QKRYLV-- 234 (503)
T ss_dssp ---------------------------------------------------------CCCCB---CT-----TSCBCC--
T ss_pred HhCCCCCCEEEcCCCcHHHHHH-HHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccchh---cc-----cccccc--
Confidence 99988 999999999999999 665 56999998889999999999999875432110 00 001111
Q ss_pred cEEecCCCCHHHHHHHHHHcCCCcC
Q psy9748 993 PITITDQTPMETVVDMYKKRSISVT 1017 (1359)
Q Consensus 993 ~~tV~~dtpLeel~~lm~~~gI~lp 1017 (1359)
...+.. .+..+.++.+.+.++.+.
T Consensus 235 ~a~v~~-~~~~e~~~~l~e~gv~~l 258 (503)
T 1me8_A 235 GAGINT-RDFRERVPALVEAGADVL 258 (503)
T ss_dssp EEEECS-SSHHHHHHHHHHHTCSEE
T ss_pred ccccCc-hhHHHHHHHHHhhhccce
Confidence 122333 445556777777776553
No 70
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.07 E-value=8e-12 Score=152.15 Aligned_cols=172 Identities=17% Similarity=0.227 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHhcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCc----ch---hhhccccccccccccc
Q psy9748 753 FRLSLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLD----SK---EEFASTALASDVMQPK 825 (1359)
Q Consensus 753 ~pls~vvi~~ElTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd----~k---~e~l~~~~V~DVMt~~ 825 (1359)
.|. -+-+..|+|+++.+.+|++.+.|.... + ..+...+.+..++.++. .+ .....-.+++|+|+++
T Consensus 32 ~p~-~v~~~~eLt~~~~l~iP~is~~m~~v~-~-----~~lA~al~~~GglG~i~~~~~~e~~~~~v~~v~~~~~iM~~~ 104 (494)
T 1vrd_A 32 LPK-DVKIDTRLTRQIRINIPLVSAAMDTVT-E-----AALAKALAREGGIGIIHKNLTPDEQARQVSIVKKTENGIIYD 104 (494)
T ss_dssp CGG-GSCCCEESSSSCEESSSEEECCCTTTC-S-----HHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHTC-------
T ss_pred CCC-ceEEEehhhCCCccCceeEecchHHHh-H-----HHHHHHHHHcCCceEEecCCChHHHHHHHHhhhhHhhcCccC
Confidence 455 566789999999999999876543211 1 12222333333332222 11 1122234578999975
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCC
Q psy9748 826 HSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQ 905 (1359)
Q Consensus 826 ~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~ 905 (1359)
++.+++++|++|+.++|.+++++++||+| ++++++|+|+.+||...-
T Consensus 105 -----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd--~~~~lvGivt~~Dl~~~~-------------------------- 151 (494)
T 1vrd_A 105 -----PITVTPDMTVKEAIDLMAEYKIGGLPVVD--EEGRLVGLLTNRDVRFEK-------------------------- 151 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----CeEECCCCCHHHHHHHHHHcCceEEEEEc--CCCEEEEEEEHHHHHhhc--------------------------
Confidence 45678999999999999999999999998 467999999999997521
Q ss_pred CCCCCCccccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhc
Q psy9748 906 PLPGAPPILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQND 970 (1359)
Q Consensus 906 ~~~~~~~~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~ 970 (1359)
....+++++|++ ++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++.+...
T Consensus 152 -----~~~~~v~~im~~~~~~~~v~~~~~l~ea~~-~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 152 -----NLSKKIKDLMTPREKLIVAPPDISLEKAKE-ILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ---------------------------------------------------------------CHHHHTCT
T ss_pred -----CCCCcHHHHhCCCCCCeEECCCCCHHHHHH-HHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 012468899998 8999999999999999 666 5699999888999999999999987543
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.05 E-value=1.4e-11 Score=149.92 Aligned_cols=160 Identities=20% Similarity=0.235 Sum_probs=23.7
Q ss_pred HhcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCcc----h---hhhcccccccccccccCCCCeEEEeC
Q psy9748 763 ELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLDS----K---EEFASTALASDVMQPKHSDPLSVLTQ 835 (1359)
Q Consensus 763 ElTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd~----k---~e~l~~~~V~DVMt~~~~~pLvviv~ 835 (1359)
++|.++.+-+|++.+.|-+ .....+...+.+..|..+++. + ++...-.+++++|.++ .++++
T Consensus 34 ~lt~~i~l~iPivsa~M~t------VTe~~lA~ala~~GGiGvI~~~~~~e~~a~~v~~vk~~~~~m~~~-----~v~v~ 102 (490)
T 4avf_A 34 RLTRGIELNIPLVSAAMDT------VTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAIVRD-----PVTVT 102 (490)
T ss_dssp EEETTEEESSSEEECSCTT------TCSHHHHHHHHHHTSEEEECCSSCHHHHHHHHHHHHHCCC---------------
T ss_pred ccccCcccCCCccccchhh------hCHHHHHHHHHHcCCCccccCCCCHHHHHHHhhhhcccccCcccC-----ceEeC
Confidence 3567778888877654421 111222223333333333331 1 1222334578999876 34678
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCCCcccc
Q psy9748 836 DSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILR 915 (1359)
Q Consensus 836 ~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~~~~id 915 (1359)
+++|++|+.++|.+++++++||++ +++++|+|+.+||.... ....+
T Consensus 103 ~~~tv~ea~~~m~~~~~s~~pVvd---~g~lvGIVt~rDl~~~~-------------------------------~~~~~ 148 (490)
T 4avf_A 103 PSTKIIELLQMAREYGFSGFPVVE---QGELVGIVTGRDLRVKP-------------------------------NAGDT 148 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEE---CCEEEEEEEhHHhhhcc-------------------------------ccCCc
Confidence 999999999999999999999997 67999999999996321 12356
Q ss_pred cccccc-c-CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 916 LDKILD-M-APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 916 L~~iMd-~-sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
++++|+ + ++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++...
T Consensus 149 V~~vMtp~~~~vtv~~~~~l~ea~~-~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 149 VAAIMTPKDKLVTAREGTPLEEMKA-KLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHHhccCCCCEEECCCCcHHHHHH-HHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 899999 4 6899999999999999 666 57999999889999999999999764
No 72
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.97 E-value=2.7e-12 Score=157.06 Aligned_cols=172 Identities=14% Similarity=0.168 Sum_probs=90.8
Q ss_pred HHHHHHHHhcCCcchHHHHhHHHHHHHHHHhhccCCCcchhhhhccCCCCCc----chh--hh-cccccccccccccCCC
Q psy9748 756 SLVVIMFELTGGVRYIVPLMAAAMASKWVGDALGKQGIYDAHIMLNAYPFLD----SKE--EF-ASTALASDVMQPKHSD 828 (1359)
Q Consensus 756 s~vvi~~ElTG~~~~ilP~miav~is~~v~~~~~~~sIYd~~I~lng~PfLd----~k~--e~-l~~~~V~DVMt~~~~~ 828 (1359)
+.+.+.+|||+++.+.+|+|.+.|-+. ....+.+.+..+++..++. +++ +. ..-.+++|+|+++
T Consensus 47 ~~v~l~~eLt~~~~~~iP~vsa~md~~------t~~~la~~ia~~gg~gii~~~~t~e~~~~~v~~v~~~~~im~~~--- 117 (514)
T 1jcn_A 47 DEVDLTSALTRKITLKTPLISSPMDTV------TEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKNFEQGFITD--- 117 (514)
T ss_dssp GGCBCCEESSSSCEESSCEEECCCTTT------CSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTCCTTSCSS---
T ss_pred ceeEEEeeccCCeeEeceEEEEehhhh------hhhhHHHHHHhcCCeeEEecCCCHHHHHHHHHhhhhhhhccccC---
Confidence 567888999999999999998733221 0011122222233333221 111 11 1224688999875
Q ss_pred CeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCC-CCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCC
Q psy9748 829 PLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRE-SQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPL 907 (1359)
Q Consensus 829 pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~-d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~ 907 (1359)
.+++.+++|++|+.++|.+++++++||+|+++ +++++|+|+++||......
T Consensus 118 --~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~-------------------------- 169 (514)
T 1jcn_A 118 --PVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK-------------------------- 169 (514)
T ss_dssp --CCCCCC-----------------CEESCC--------CCEECTTTTC-------------------------------
T ss_pred --CEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc--------------------------
Confidence 23578999999999999999999999997321 5899999999998753100
Q ss_pred CCCCccccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 908 PGAPPILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 908 ~~~~~~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
....+++++|++ .+++++++++++++++ +|. +++||+|++|+++|+||++|+++.+.
T Consensus 170 ---~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~-~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 170 ---DHTTLLSEVMTPRIELVVAPAGVTLKEANE-ILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp --------------CCBCCCCEETTCCSTTTTT-HHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred ---cCCCCHHHHhCCCCCCeEECCCCCHHHHHH-HHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 112468899998 8999999999999999 555 67999998889999999999987653
No 73
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.97 E-value=3.1e-09 Score=129.17 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=98.0
Q ss_pred cccccccccCCCCeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCcccee
Q psy9748 817 LASDVMQPKHSDPLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVR 896 (1359)
Q Consensus 817 ~V~DVMt~~~~~pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~ 896 (1359)
.++|+|+++ ++.+++++|++++.++|.+++++++||+++.++++++|+|+.+||....
T Consensus 91 ~~~~im~~~-----~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~----------------- 148 (491)
T 1zfj_A 91 RSENGVIID-----PFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS----------------- 148 (491)
T ss_dssp HHTTTTSSS-----CCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS-----------------
T ss_pred hHHhcCcCC-----CeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc-----------------
Confidence 357899885 3457899999999999999999999999632468999999999997430
Q ss_pred cccCCCCCCCCCCCCccccccccccc-CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 897 FVQNDTQPQPLPGAPPILRLDKILDM-APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 897 F~~~~~~p~~~~~~~~~idL~~iMd~-sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
....+++++|++ ++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++.+..
T Consensus 149 --------------~~~~~v~~im~~~~~~~v~~~~~l~~a~~-~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 149 --------------DYNAPISEHMTSEHLVTAAVGTDLETAER-ILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp --------------CSSSBTTTSCCCSCCCCEETTCCHHHHHH-HHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred --------------cCCCcHHHHcCCCCCEEECCCCCHHHHHH-HHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 123568899998 8999999999999999 555 579999998899999999999999875
No 74
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.91 E-value=2.1e-11 Score=148.16 Aligned_cols=165 Identities=17% Similarity=0.236 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCcchHHHHhHHHHHH-------HHHHhhccCCCcchhhhhccCCCCCcchhhhcccccccccccccCCC
Q psy9748 756 SLVVIMFELTGGVRYIVPLMAAAMAS-------KWVGDALGKQGIYDAHIMLNAYPFLDSKEEFASTALASDVMQPKHSD 828 (1359)
Q Consensus 756 s~vvi~~ElTG~~~~ilP~miav~is-------~~v~~~~~~~sIYd~~I~lng~PfLd~k~e~l~~~~V~DVMt~~~~~ 828 (1359)
.-+.+.+|+|+++.+.+|+|.+.|.+ ..+++. +..++ ++.+ .+.-+..+....-....|+|+++
T Consensus 32 ~~v~l~t~lt~~l~l~~PIi~a~m~~vt~~ela~ava~~-GglG~----i~~~-~~~e~~~~~I~~v~~~~~~m~~~--- 102 (486)
T 2cu0_A 32 KDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMARE-GGLGV----IHRN-MGIEEQVEQVKRVKRAERLIVED--- 102 (486)
T ss_dssp TTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHT-TCEEE----ECSS-SCHHHHHHHHHHHHTCC---------
T ss_pred ceEEEEeeecCCcccccceEEccceeecHHHHHHHHHhc-CCcee----ecCC-CCHHHHHHHHHhhcchhhccccC---
Confidence 46777899999999999999876542 223322 11121 1111 11001111122223457889875
Q ss_pred CeEEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCC
Q psy9748 829 PLSVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLP 908 (1359)
Q Consensus 829 pLvviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~ 908 (1359)
++.+++++|++++.++|.+++++++||++ + ++++|+|+.+||.. +
T Consensus 103 --~~~v~~~~tv~ea~~~~~~~~~~~~pVvd--~-~~lvGivt~~Dl~~---~--------------------------- 147 (486)
T 2cu0_A 103 --VITIAPDETVDFALFLMEKHGIDGLPVVE--D-EKVVGIITKKDIAA---R--------------------------- 147 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --ceEECCCCCHHHHHHHHHHcCCcEEEEEE--C-CEEEEEEEHHHhcc---C---------------------------
Confidence 45678899999999999999999999997 3 88999999999874 0
Q ss_pred CCCcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 909 GAPPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 909 ~~~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
...+++++|++++++++++++++++++ +|+ +.+||+|++|+++|+||++|+++...
T Consensus 148 ---~~~~v~~im~~~~~~v~~~~~l~eal~-~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 148 ---EGKLVKELMTKEVITVPESIEVEEALK-IMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ---------------------------------------------------------------C
T ss_pred ---CCCCHHHHccCCCeEECCcCcHHHHHH-HHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 014688899988999999999999999 666 47899998889999999999999864
No 75
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.77 E-value=7.6e-10 Score=132.81 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=0.0
Q ss_pred EEeCCCCCHHHHHHHHHhcCCCeEEEEEeC-CCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCC
Q psy9748 832 VLTQDSMTVQDVETLLKETEHNGFPVVVSR-ESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGA 910 (1359)
Q Consensus 832 viv~~~~TV~el~~lL~~~~~sgfPVVds~-~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~ 910 (1359)
+++.++.|+.|+.+++.+++++++||+++. .+++|+|+|+.+|+...
T Consensus 149 vtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-------------------------------- 196 (556)
T 4af0_A 149 LCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-------------------------------- 196 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--------------------------------
Confidence 456899999999999999999999999853 36799999999998642
Q ss_pred CcccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHh
Q psy9748 911 PPILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQ 968 (1359)
Q Consensus 911 ~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~ 968 (1359)
....+++++|++.++|++++++++++.+ +++ ..+||+|++|+|+|+||++|+++...
T Consensus 197 d~~~~V~evMT~~lvt~~~~~~leeA~~-iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 197 DAETPIKSVMTTEVVTGSSPITLEKANS-LLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp --------------------------------------------------------------
T ss_pred ccceEhhhhcccceEEecCCCCHHHHHH-HHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 1124689999999999999999999999 555 46899999999999999999988653
No 76
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.49 E-value=1.8e-08 Score=104.60 Aligned_cols=104 Identities=9% Similarity=0.109 Sum_probs=80.6
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccC-------CCCC------
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQ-------PQPL------ 976 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~-------~~~~------ 976 (1359)
.++++++|+++++++++++++.+|++.|-+ +.+||+|++|+++|+||.+|+++....... ....
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVE 96 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHH
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHH
Confidence 468999999999999999999999994444 679999998899999999999875422110 0000
Q ss_pred --CCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 977 --PGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 977 --~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
........+.++|+.++.++++++++.++++.|.+++++.
T Consensus 97 ~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~ 138 (170)
T 4esy_A 97 HLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHR 138 (170)
T ss_dssp HHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSE
T ss_pred hhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcE
Confidence 0001124578899999999999999999999999988643
No 77
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.47 E-value=4.4e-07 Score=94.52 Aligned_cols=94 Identities=4% Similarity=0.053 Sum_probs=77.2
Q ss_pred cccccccccc--cCCeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccc
Q psy9748 912 PILRLDKILD--MAPITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 985 (1359)
Q Consensus 912 ~~idL~~iMd--~sPiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv 985 (1359)
....++++|. +.++++++++++.++++.|.+ +++||+|++ |+++|+||.+|+++...... ..++
T Consensus 40 ~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----------~~~v 109 (172)
T 3lhh_A 40 DERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE----------RLEL 109 (172)
T ss_dssp ---CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC----------CCCG
T ss_pred CCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC----------cccH
Confidence 3467899999 677899999999999994444 679999986 79999999999999875421 2457
Q ss_pred ccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 986 DKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 986 ~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
.++| ..+.++.+++++.++++.|.+++++.
T Consensus 110 ~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~ 139 (172)
T 3lhh_A 110 VDLV-KNCNFVPNSLSGMELLEHFRTTGSQM 139 (172)
T ss_dssp GGGC-BCCEEEETTCCHHHHHHHHHHHTCSE
T ss_pred HHHh-cCCeEeCCCCCHHHHHHHHHHcCCeE
Confidence 7888 88999999999999999999988653
No 78
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.47 E-value=4.4e-07 Score=91.56 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=79.0
Q ss_pred ccccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccc
Q psy9748 912 PILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 985 (1359)
Q Consensus 912 ~~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv 985 (1359)
....++++|.+ .++++++++++.++++.|.+ +++||+|++ |+++|+||.+|+++.+.... ...+
T Consensus 21 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----------~~~v 90 (148)
T 3lv9_A 21 EEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----------KIEL 90 (148)
T ss_dssp GTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----------CCCG
T ss_pred CCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----------CccH
Confidence 34789999999 89999999999999994444 679999986 79999999999999875532 2356
Q ss_pred ccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 986 DKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 986 ~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
.++| .++.++++++++.++.+.|.+++++.
T Consensus 91 ~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~ 120 (148)
T 3lv9_A 91 EEIL-RDIIYISENLTIDKALERIRKEKLQL 120 (148)
T ss_dssp GGTC-BCCEEEETTSBHHHHHHHHHHHTCSE
T ss_pred HHhc-CCCeEECCCCCHHHHHHHHHhcCCeE
Confidence 7788 78899999999999999999988543
No 79
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.47 E-value=4e-07 Score=92.13 Aligned_cols=94 Identities=12% Similarity=0.134 Sum_probs=80.3
Q ss_pred ccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|.+ .++++++++++.++++ +++ +++||+|++|+++|+||.+|+++.+.+... .....+.+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~-~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------~~~~~v~~ 99 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALL-EITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD-------MRDASIAD 99 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHH-HHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC-------CTTCBHHH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHH-HHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC-------cccCcHHH
Confidence 479999999 9999999999999999 555 679999988899999999999998754211 12356788
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|...+.++.++++++++.+.|.+++++
T Consensus 100 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 127 (149)
T 3k2v_A 100 VMTRGGIRIRPGTLAVDALNLMQSRHIT 127 (149)
T ss_dssp HSEESCCEECTTCBHHHHHHHHHHHTCS
T ss_pred HcCCCCeEECCCCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999998764
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.46 E-value=6e-07 Score=89.07 Aligned_cols=96 Identities=14% Similarity=0.162 Sum_probs=78.6
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKIL 989 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im 989 (1359)
...++++|.+.++++++++++.++++.|.+ +.+||+|++|+++|+||.+|+++....... ....++.++|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------~~~~~v~~~m 78 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-------PYDIPVERIM 78 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-------CTTSBGGGTC
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-------cccCCHHHHh
Confidence 467899999999999999999999994433 679999977799999999999854322110 1234678899
Q ss_pred ccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 990 DMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 990 ~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
...+.++++++++.++.+.|.+++++
T Consensus 79 ~~~~~~v~~~~~l~~~~~~m~~~~~~ 104 (138)
T 2yzi_A 79 TRNLITANVNTPLGEVLRKMAEHRIK 104 (138)
T ss_dssp BCSCCEEETTSBHHHHHHHHHHHTCS
T ss_pred hCCCeEECCCCcHHHHHHHHHhcCCC
Confidence 89999999999999999999998765
No 81
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.45 E-value=3.5e-07 Score=88.67 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=76.7
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
.++++|++.++++++++++.++++ +|+ +++||+|++|+++|+||.+|+++.+.... ..+.++|.
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~-----------~~v~~~~~ 69 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAK-ILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK-----------KTIEEIMT 69 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHH-HHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC-----------CBGGGTSB
T ss_pred chHHhhCCCCEEeCCCCcHHHHHH-HHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc-----------cCHHHHhc
Confidence 467899999999999999999999 555 67999998889999999999999875421 15778888
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
..+.++.++++++++.+.|.+.+++
T Consensus 70 ~~~~~v~~~~~l~~~~~~~~~~~~~ 94 (122)
T 3kpb_A 70 RNVITAHEDEPVDHVAIKMSKYNIS 94 (122)
T ss_dssp SSCCCEETTSBHHHHHHHHHHHTCS
T ss_pred CCCeEECCCCCHHHHHHHHHHhCCC
Confidence 8899999999999999999988744
No 82
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.44 E-value=1.6e-07 Score=92.39 Aligned_cols=94 Identities=6% Similarity=-0.106 Sum_probs=79.1
Q ss_pred cccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 912 PILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 912 ~~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..+.++++|.+.+.++++++++.++++ +++ +++||+|+ |+++|+||.+|+++.+.+... ...++.+
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~--------~~~~v~~ 72 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAAR-RLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPT--------VKEKLGE 72 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHH-HHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCC--------TTCBCCG
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHH-HHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCc--------ccCcHHH
Confidence 347899999999999999999999999 555 67999999 799999999999976532211 1145778
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|...+.++.+++++.++.+.|.+++++
T Consensus 73 ~m~~~~~~v~~~~~l~~~~~~~~~~~~~ 100 (128)
T 3gby_A 73 ELLETVRSYRPGEQLFDNLISVAAAKCS 100 (128)
T ss_dssp GGCBCCCCBCTTSBGGGSHHHHHHCSSS
T ss_pred HccCCCcEECCCCCHHHHHHHHHhCCCc
Confidence 8888899999999999999999999876
No 83
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.44 E-value=1e-07 Score=98.33 Aligned_cols=120 Identities=7% Similarity=0.012 Sum_probs=85.8
Q ss_pred cccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccc
Q psy9748 915 RLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKIL 989 (1359)
Q Consensus 915 dL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im 989 (1359)
.++++|.+ ..+++++++++++|++.|-+ +++||+|++|+++|+||.+|+++++........ .....++.++|
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~---~~~~~~v~~im 92 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQE---IMADTDIVHMT 92 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHH---HHTTSBGGGTC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccc---cccccCHHHhh
Confidence 46788875 56799999999999994444 679999988899999999999998765432211 11234678899
Q ss_pred ccccEEecCCCCHHHHHHHHHHcCC-CcCCccchhHHHHHHHHHHHHHH
Q psy9748 990 DMAPITITDQTPMETVVDMYKKRSI-SVTNGQKEIFLMRFLWDRWETLG 1037 (1359)
Q Consensus 990 ~~~~~tV~~dtpLeel~~lm~~~gI-~lp~~~~~~tl~gli~eLl~~Ig 1037 (1359)
...+.++++++++.++++.|.++++ ++.+++.+....-...+++.++.
T Consensus 93 ~~~~~~v~~~~~l~~~~~~m~~~~~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 93 KTDVAVVSPDFTITEVLHKLVDESFLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp BCSCCCBCTTCCHHHHHHHTTTSSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred cCCceecccccHHHHHHHHHHHcCCeEEEecCCEEEEEEEHHHHHHHHH
Confidence 9999999999999999999998875 23333333222223345555553
No 84
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.43 E-value=5.8e-07 Score=92.25 Aligned_cols=101 Identities=9% Similarity=0.122 Sum_probs=80.1
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCC-CCCCCCccccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQP-LPGAPPILRLDKI 988 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~-~~~~~~~~rv~~i 988 (1359)
..++++|++.++++++++++.++++ +|+ +.+||+|++|+++|+||.+|+++.+.....+.. ........++.++
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~-~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~i 83 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKH-LMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEV 83 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHH-HHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHH-HHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHH
Confidence 5789999999999999999999999 555 679999987899999999999998754321110 0011224568889
Q ss_pred cccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 989 LDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 989 m~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
|...+.++.+++++.++++.|.+.+++
T Consensus 84 m~~~~~~v~~~~~l~~a~~~m~~~~~~ 110 (160)
T 2o16_A 84 MHTDVTSVAPQAGLKESAIYMQKHKIG 110 (160)
T ss_dssp SCSCEEEBCTTSBHHHHHHHHHHTTCS
T ss_pred hcCCCeEECCCCCHHHHHHHHHHhCCC
Confidence 999999999999999999999998753
No 85
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.39 E-value=1.2e-06 Score=87.62 Aligned_cols=92 Identities=13% Similarity=0.246 Sum_probs=78.1
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCC--cEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAK--RTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegG--rLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|.+.++++++++++.++++ +++ +++||+|++| +++|+||++|+++.+.+.. .....+.+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~--------~~~~~v~~ 75 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVAT-ELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL--------DLDGPAMP 75 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHH-HHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC--------CTTSBSGG
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHH-HHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC--------CCCCCHHH
Confidence 5789999999999999999999999 555 6799999988 9999999999999875421 11346788
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|...+.++.++ ++.++.+.|.+++++
T Consensus 76 ~m~~~~~~v~~~-~l~~a~~~m~~~~~~ 102 (141)
T 2rih_A 76 IANSPITVLDTD-PVHVAAEKMRRHNIR 102 (141)
T ss_dssp GCBCCCEEETTS-BHHHHHHHHHHHTCS
T ss_pred HcCCCCeEEcCC-CHHHHHHHHHHcCCe
Confidence 898899999999 999999999998753
No 86
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.37 E-value=9e-07 Score=90.61 Aligned_cols=95 Identities=9% Similarity=0.134 Sum_probs=78.6
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKIL 989 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im 989 (1359)
...++++|++ |+++++++++.++++.|.+ +++||+|++|+++|+||.+|+++.+.... .....++.++|
T Consensus 16 ~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------~~~~~~v~~~m 87 (159)
T 3fv6_A 16 KLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ-------ELTSVPVHIIM 87 (159)
T ss_dssp TCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCS-------CTTTCBGGGTS
T ss_pred hCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccC-------cccCcCHHHHH
Confidence 4678999997 7799999999999994444 67999998789999999999999874321 11234678889
Q ss_pred cc--ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 990 DM--APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 990 ~~--~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.. .+.++.+++++.++.+.|.+++++
T Consensus 88 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~ 115 (159)
T 3fv6_A 88 TRMPNITVCRREDYVMDIAKHLIEKQID 115 (159)
T ss_dssp EETTSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred cCCCCcEEECCCCCHHHHHHHHHHcCCc
Confidence 88 889999999999999999998865
No 87
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.37 E-value=4.3e-07 Score=91.59 Aligned_cols=101 Identities=3% Similarity=-0.006 Sum_probs=81.1
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLD 986 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~ 986 (1359)
...++++|.+ .++++++++++.++++ +|+ +++||+|++|+++|+||.+|+++.+......+ ........+.
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~-~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~--~~~~~~~~v~ 90 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALL-VLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIE--FERLEEMKVE 90 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHH-HHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBC--GGGGGGCBGG
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHH-HHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccc--hhHHhcCCHH
Confidence 4678999995 5889999999999999 555 67999998889999999999999875422111 0112345688
Q ss_pred cccccccEEecCCCCHHHHHHHHHHcCCCcC
Q psy9748 987 KILDMAPITITDQTPMETVVDMYKKRSISVT 1017 (1359)
Q Consensus 987 ~im~~~~~tV~~dtpLeel~~lm~~~gI~lp 1017 (1359)
++|...+.++.+++++.++++.|.++++ +|
T Consensus 91 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~-l~ 120 (150)
T 3lqn_A 91 QVMKQDIPVLKLEDSFAKALEMTIDHPF-IC 120 (150)
T ss_dssp GTCBSSCCEEETTCBHHHHHHHHHHCSE-EE
T ss_pred HHhcCCCceeCCCCCHHHHHHHHHhCCE-EE
Confidence 8999999999999999999999998886 44
No 88
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.37 E-value=8.8e-07 Score=86.06 Aligned_cols=93 Identities=9% Similarity=0.110 Sum_probs=77.0
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccccc
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDM 991 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~ 991 (1359)
.++++|++.++++++++++.++++.|.+ +.+||+| +|+++|+||.+|+++.+.+... ....++.++|..
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~-------~~~~~v~~~m~~ 73 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDD-------LAEVKVWEVMER 73 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCC-------TTTSBHHHHCBC
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCc-------ccccCHHHHcCC
Confidence 4678999999999999999999994444 6799999 6799999999999987754321 123467888988
Q ss_pred ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 992 APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 992 ~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.+.+++++++++++.+.|.+++++
T Consensus 74 ~~~~v~~~~~l~~~~~~~~~~~~~ 97 (125)
T 1pbj_A 74 DLVTISPRATIKEAAEKMVKNVVW 97 (125)
T ss_dssp GGGEECTTSCHHHHHHHHHHHTCS
T ss_pred CCeEECCCCCHHHHHHHHHhcCCc
Confidence 999999999999999999988753
No 89
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.36 E-value=1.2e-06 Score=86.39 Aligned_cols=93 Identities=10% Similarity=0.226 Sum_probs=77.8
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
..++++|.+.++++++++++.++++.|-+ +++||+| +|+++|+||.+|+++.+..... ...++.++|.
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~--------~~~~v~~~~~ 74 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKS--------LETKAEEFMT 74 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC--------TTCBGGGTSE
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCC--------cccCHHHHcC
Confidence 57899999999999999999999994433 6799999 6699999999999987754211 1246778888
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
..+.++++++++.++.+.|.+.+++
T Consensus 75 ~~~~~v~~~~~l~~~~~~~~~~~~~ 99 (133)
T 2ef7_A 75 ASLITIREDSPITGALALMRQFNIR 99 (133)
T ss_dssp ECCCCEETTSBHHHHHHHHHHHTCS
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCC
Confidence 8899999999999999999998854
No 90
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.33 E-value=9.6e-07 Score=87.45 Aligned_cols=92 Identities=8% Similarity=0.146 Sum_probs=77.3
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHH-HHHHhhccCCCCCCCCCCcccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSI-VRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDI-Lr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
...++++|++.++++++++++.++++ +|+ +++||+|++|+++|+||++|+ ++++.+. .....++.+
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~--------~~~~~~v~~ 77 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFE-KMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDK--------YTLETTIGD 77 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHH-HHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTC--------CCSSCBHHH
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHH-HHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhc--------ccCCcCHHH
Confidence 46789999999999999999999999 665 679999987799999999999 8876431 112346788
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRS 1013 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~g 1013 (1359)
+|...+.+++++++++++.+.|.+.+
T Consensus 78 ~m~~~~~~v~~~~~l~~~~~~~~~~~ 103 (138)
T 2p9m_A 78 VMTKDVITIHEDASILEAIKKMDISG 103 (138)
T ss_dssp HSCSSCCCEETTSBHHHHHHHHTCC-
T ss_pred HhCCCcEEECCCCCHHHHHHHHHhcC
Confidence 89889999999999999999999887
No 91
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.31 E-value=1.7e-06 Score=90.78 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=79.5
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
..++++|++.++++++++++.++++.|-+ +++||+|++|+++|+||.+|+++.+..... ......+.++|.
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~------~~~~~~v~~im~ 82 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK------KPDEVPIRLVMR 82 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC------CGGGSBGGGTSB
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc------CcccCCHHHHhC
Confidence 67899999999999999999999994433 679999877799999999999987754211 112346788999
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
..+.++.+++++.++++.|.+++++
T Consensus 83 ~~~~~v~~~~~l~~a~~~m~~~~~~ 107 (184)
T 1pvm_A 83 KPIPKVKSDYDVKDVAAYLSENGLE 107 (184)
T ss_dssp SSCCEEETTCBHHHHHHHHHHHTCS
T ss_pred CCCcEECCCCCHHHHHHHHHHcCCc
Confidence 8999999999999999999987653
No 92
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.29 E-value=9e-07 Score=89.76 Aligned_cols=102 Identities=3% Similarity=-0.018 Sum_probs=80.7
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
...++++|.+ .++++++++++.++++.|.+ +++||+|++|+++|+||.+|+++.+......+ ........+.+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~--~~~~~~~~v~~ 87 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIE--FERLETMKVEE 87 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBC--GGGGGTCBGGG
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccc--hHHhcCCcHHH
Confidence 4678999997 88999999999999994443 67999998789999999999998765321100 01112346788
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCCcC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSISVT 1017 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~lp 1017 (1359)
+|...+.++++++++.++.+.|.++++ +|
T Consensus 88 ~m~~~~~~v~~~~~l~~a~~~m~~~~~-l~ 116 (157)
T 2emq_A 88 VMNRNIPRLRLDDSLMKAVGLIVNHPF-VC 116 (157)
T ss_dssp TCBCCCCEEETTSBHHHHHHHHHHSSE-EE
T ss_pred HhCCCCceecCCCcHHHHHHHHhhCCE-EE
Confidence 999999999999999999999999886 44
No 93
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.29 E-value=1.3e-06 Score=89.99 Aligned_cols=98 Identities=8% Similarity=0.131 Sum_probs=81.4
Q ss_pred Cccccccccccc---CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcc
Q psy9748 911 PPILRLDKILDM---APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPIL 983 (1359)
Q Consensus 911 ~~~idL~~iMd~---sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~ 983 (1359)
...+.++++|++ .++++++++++.++++ +++ +.+||+|++|+++|+||.+|+++.+...... ....
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~-~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~------~~~~ 93 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAG-TLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAA------SLQQ 93 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHH-HHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGG------GGTS
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHH-HHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCc------cccC
Confidence 445789999996 6899999999999999 555 6799999888999999999999987653211 1134
Q ss_pred ccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 984 RLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 984 rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
++.++|...+.++.++++++++.+.|.+.+++
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 125 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFR 125 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCS
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCC
Confidence 67788888999999999999999999998754
No 94
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.28 E-value=6.4e-07 Score=91.48 Aligned_cols=100 Identities=5% Similarity=-0.065 Sum_probs=80.5
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
...++++|.+ .++++++++++.++++.|.+ +.+||+|++|+++|+||.+|+++.+...... .........+.+
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~--~~~~~~~~~v~~ 90 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERI--EFEKLDQITVEE 90 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSB--CGGGTTTSBHHH
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhccc--chhhhccCCHHH
Confidence 4678999998 89999999999999994433 6799999888999999999999987542111 001122356888
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSI 1014 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI 1014 (1359)
+|...+.++.++++++++++.|.+.++
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~m~~~~~ 117 (159)
T 1yav_A 91 VMLTDIPRLHINDPIMKGFGMVINNGF 117 (159)
T ss_dssp HSBCSCCEEETTSBHHHHHHHTTTCSE
T ss_pred hcCCCCceEcCCCCHHHHHHHHHhCCE
Confidence 999999999999999999999998875
No 95
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.28 E-value=1.5e-06 Score=85.90 Aligned_cols=93 Identities=6% Similarity=0.134 Sum_probs=74.7
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 985 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv 985 (1359)
...++++|++ ..+++++++++.++++ +++ +++||+|++ |+++|+||.+|+++...... ....+
T Consensus 5 ~~~v~~iM~~~~~v~~v~~~~~~~~a~~-~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~---------~~~~v 74 (130)
T 3i8n_A 5 DVPVTQVMTPRPVVFRVDATMTINEFLD-KHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS---------GQKQL 74 (130)
T ss_dssp --CCTTTSCCBCCCCEEETTSBHHHHHH-HTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT---------TTSBH
T ss_pred cCCHhhCCCcHHHEEEEcCCCCHHHHHH-HHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC---------CcCCH
Confidence 4678999995 3458999999999999 555 569999976 79999999999999875421 12457
Q ss_pred ccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 986 DKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 986 ~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
.++|+ .+.++.+++++.++++.|.+++++.
T Consensus 75 ~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~ 104 (130)
T 3i8n_A 75 GAVMR-PIQVVLNNTALPKVFDQMMTHRLQL 104 (130)
T ss_dssp HHHSE-ECCEEETTSCHHHHHHHHHHHTCCE
T ss_pred HHHhc-CCcCcCCCCcHHHHHHHHHHcCCeE
Confidence 77884 5789999999999999999988653
No 96
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.27 E-value=7.6e-07 Score=87.76 Aligned_cols=96 Identities=7% Similarity=0.111 Sum_probs=77.6
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHH-HHhhccCCCCCCCCCCccccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVR-FVQNDTQPQPLPGAPPILRLDKI 988 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr-~l~~~~~~~~~~~~~~~~rv~~i 988 (1359)
...++++|.+.++++++++++.++++.|-+ +.+||+|++|+++|+||.+|+++ .+.... .....++.++
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------~~~~~~v~~~ 79 (133)
T 1y5h_A 7 MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL-------DPNTATAGEL 79 (133)
T ss_dssp -CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC-------CTTTSBHHHH
T ss_pred hcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC-------CccccCHHHH
Confidence 357899999999999999999999994433 67999987779999999999994 443211 1123467888
Q ss_pred cccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 989 LDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 989 m~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
|...+.++++++++.++.+.|.+.+++
T Consensus 80 m~~~~~~v~~~~~l~~~~~~m~~~~~~ 106 (133)
T 1y5h_A 80 ARDSIYYVDANASIQEMLNVMEEHQVR 106 (133)
T ss_dssp HTTCCCCEETTCCHHHHHHHHHHHTCS
T ss_pred hcCCCEEECCCCCHHHHHHHHHHcCCC
Confidence 988999999999999999999998753
No 97
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.26 E-value=7e-07 Score=89.13 Aligned_cols=94 Identities=9% Similarity=0.135 Sum_probs=76.0
Q ss_pred cccccccc--cCCeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILD--MAPITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd--~sPiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|. +.++++++++++.++++.|-+ +++||+|++ |+++|+||.+|+++.+.... ....++.+
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~--------~~~~~v~~ 74 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD--------GDSDDVKK 74 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS--------GGGCCGGG
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc--------CCCcCHHH
Confidence 56889998 567899999999999994444 679999986 79999999999998764311 12345677
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
+|+. +.++.+++++.++++.|.+++++.
T Consensus 75 ~m~~-~~~v~~~~~l~~~~~~m~~~~~~~ 102 (136)
T 3lfr_A 75 LLRP-ATFVPESKRLNVLLREFRANHNHM 102 (136)
T ss_dssp TCBC-CCEEETTCBHHHHHHHHHHHTCCE
T ss_pred HcCC-CeEECCCCcHHHHHHHHHhcCCeE
Confidence 8866 899999999999999999988654
No 98
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.26 E-value=6.2e-07 Score=88.20 Aligned_cols=93 Identities=11% Similarity=0.265 Sum_probs=75.4
Q ss_pred cccccccccC--CeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILDMA--PITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd~s--PiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|.+. ++++++++++.++++.|.+ +++||+|++ |+++|+||.+|+++.+.... ...++.+
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~---------~~~~v~~ 73 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDA---------EAFSMDK 73 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTC---------CCCCHHH
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccC---------CCCCHHH
Confidence 5688999965 8899999999999994444 679999986 79999999999998764321 1235677
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
+|+. +.++.+++++.++++.|.+++++.
T Consensus 74 ~m~~-~~~v~~~~~l~~a~~~m~~~~~~~ 101 (127)
T 3nqr_A 74 VLRT-AVVVPESKRVDRMLKEFRSQRYHM 101 (127)
T ss_dssp HCBC-CCEEETTCBHHHHHHHHHHTTCCE
T ss_pred HcCC-CeEECCCCcHHHHHHHHHhcCCeE
Confidence 8855 789999999999999999988653
No 99
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.25 E-value=1.4e-06 Score=86.43 Aligned_cols=95 Identities=9% Similarity=0.121 Sum_probs=75.4
Q ss_pred ccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcC-CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPAN-AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVde-gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
+.++++|.+ .++++++++++.++++.|-+ +++||+++ +|+++|+||.+|+++.+.+.. ......+.+
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~-------~~~~~~v~~ 74 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKK-------EFTKEIMLR 74 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSS-------CCCHHHHHH
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccC-------ccchhhHHH
Confidence 467899964 67899999999999994443 67999975 579999999999999875421 112345677
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
+| ..+.+++++++++++++.|.+++++.
T Consensus 75 ~m-~~~~~v~~~~~l~~~~~~m~~~~~~~ 102 (130)
T 3hf7_A 75 AA-DEIYFVPEGTPLSTQLVKFQRNKKKV 102 (130)
T ss_dssp HS-BCCCEEETTCBHHHHHHHHHHHCCCE
T ss_pred hc-cCCeEeCCCCcHHHHHHHHHhcCCeE
Confidence 78 66889999999999999999998654
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.25 E-value=1.7e-06 Score=88.26 Aligned_cols=103 Identities=11% Similarity=0.218 Sum_probs=80.4
Q ss_pred CcccccccccccCCeEecCCCCHHHHHHHhhc---ce-eEEEcCCCcEEEEEeHHHHHHHHhhc-----cCCCC---CCC
Q psy9748 911 PPILRLDKILDMAPITITDQTPMETVCGHTFT---KQ-LLFPANAKRTLEGLRGDSIVRFVQND-----TQPQP---LPG 978 (1359)
Q Consensus 911 ~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~-LpVVdegGrLvGIITrkDILr~l~~~-----~~~~~---~~~ 978 (1359)
.....++++|.+.++++++++++.++++.|.+ +. +||+|++ +++|+||.+|+++.+... ...+. ...
T Consensus 13 ~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 91 (157)
T 1o50_A 13 MKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMK 91 (157)
T ss_dssp CBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------CCC
T ss_pred hccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHH
Confidence 44678999999999999999999999994433 67 9999988 999999999999876421 00000 001
Q ss_pred CCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 979 APPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 979 ~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.....++.++|.. +.+++++++++++++.|.+.+++
T Consensus 92 ~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~ 127 (157)
T 1o50_A 92 RLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQ 127 (157)
T ss_dssp CCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCS
T ss_pred HHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCc
Confidence 1234568889999 99999999999999999998854
No 101
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.24 E-value=2.1e-06 Score=85.00 Aligned_cols=95 Identities=8% Similarity=0.047 Sum_probs=77.2
Q ss_pred cccccccc---cCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILD---MAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd---~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|+ +.++++++++++.++++.|.+ +.+||+| +|+++|+||.+|+++.+..... .....++.+
T Consensus 6 ~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~------~~~~~~v~~ 78 (135)
T 2rc3_A 6 KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK------PVKDTQVKE 78 (135)
T ss_dssp CBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS------CGGGSBGGG
T ss_pred eeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC------CcccCCHHH
Confidence 37889999 889999999999999994433 6799998 5699999999999975533211 112456888
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|...+.+++++++++++.+.|.+++++
T Consensus 79 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~ 106 (135)
T 2rc3_A 79 IMTRQVAYVDLNNTNEDCMALITEMRVR 106 (135)
T ss_dssp TSBCSCCCBCTTCBHHHHHHHHHHHTCS
T ss_pred hccCCCeEECCCCcHHHHHHHHHHhCCC
Confidence 9989999999999999999999998754
No 102
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.23 E-value=1.8e-06 Score=87.76 Aligned_cols=93 Identities=8% Similarity=0.091 Sum_probs=77.3
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEE-cC-CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFP-AN-AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 985 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVV-de-gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv 985 (1359)
...++++|.+ .++++++++++.++++.|-+ +++||+ |+ +|+++|+||.+|+++.+.... ..++
T Consensus 19 ~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----------~~~v 88 (153)
T 3oco_A 19 DKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----------KAKI 88 (153)
T ss_dssp HCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----------TSBG
T ss_pred CCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----------CCcH
Confidence 3678999997 78999999999999994433 679999 64 369999999999999876432 2457
Q ss_pred ccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 986 DKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 986 ~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
.++| ..+.++.+++++.++++.|.+++++.
T Consensus 89 ~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~ 118 (153)
T 3oco_A 89 STIM-RDIVSVPENMKVPDVMEEMSAHRVPM 118 (153)
T ss_dssp GGTC-BCCEEEETTSBHHHHHHHHHHTTCSC
T ss_pred HHHh-CCCeEECCCCCHHHHHHHHHHcCCcE
Confidence 7888 78999999999999999999988643
No 103
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.22 E-value=1.1e-06 Score=88.17 Aligned_cols=102 Identities=8% Similarity=0.119 Sum_probs=77.4
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCC------CCCCCCC
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQP------QPLPGAP 980 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~------~~~~~~~ 980 (1359)
.+.++++|.+ .++++++++++.++++ +++ +.+||+|++|+++|+||++|+++........ .......
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALE-LLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHH-HHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHH-HHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 4678999998 7999999999999999 555 6799999888999999999998643211000 0000111
Q ss_pred CccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 981 PILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 981 ~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
...++.++|...+.++.++++++++.+.|.+++++
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~ 117 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYR 117 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCC
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCC
Confidence 23567889998899999999999999999998863
No 104
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.22 E-value=1.1e-06 Score=89.29 Aligned_cols=96 Identities=7% Similarity=0.054 Sum_probs=76.9
Q ss_pred cccccccc--cCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 914 LRLDKILD--MAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 914 idL~~iMd--~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
..++++|. +.++++++++++.++++ +++ +++||+|++|+++|+||.+|+++.+....... ......++.+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~-~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~---~~~~~~~v~~ 90 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATL-LLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQ---EIMADTDIVH 90 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHH-HHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCH---HHHTTSBGGG
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHH-HHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccc---cccccCcHHH
Confidence 46789999 57889999999999999 555 67999998889999999999999886532111 0011346788
Q ss_pred ccccccEEecCCCCHHHHHHHHHHcC
Q psy9748 988 ILDMAPITITDQTPMETVVDMYKKRS 1013 (1359)
Q Consensus 988 im~~~~~tV~~dtpLeel~~lm~~~g 1013 (1359)
+|...+.++.+++++.++.+.|.+++
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~~~~~~ 116 (156)
T 3ctu_A 91 MTKTDVAVVSPDFTITEVLHKLVDES 116 (156)
T ss_dssp GCBCSCCCBCSSCCHHHHHHHTTTSS
T ss_pred hccCCceeeCCCCcHHHHHHHHHHcC
Confidence 89889999999999999999998876
No 105
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.21 E-value=2.4e-06 Score=86.94 Aligned_cols=100 Identities=14% Similarity=0.259 Sum_probs=76.8
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcC--CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPAN--AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVde--gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
...++++|.+.++++++++++.++++.|.+ +++||+|+ +|+++|+||.+|+++.+........ ......+.+
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~---~~~~~~v~~ 88 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRA---PGHQQCLQD 88 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC----------CCCCBHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccC---Ccccchhhh
Confidence 467899999999999999999999994444 67999986 6799999999999988754321110 011234666
Q ss_pred ccccc------cEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDMA------PITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~~------~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|... +.+++++++++++++.|.+++++
T Consensus 89 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 122 (164)
T 2pfi_A 89 ILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQ 122 (164)
T ss_dssp HHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCS
T ss_pred hhcccccccCCceEECCCCcHHHHHHHHHHhCCC
Confidence 77665 78999999999999999998753
No 106
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.21 E-value=1.2e-06 Score=86.64 Aligned_cols=92 Identities=8% Similarity=0.180 Sum_probs=74.5
Q ss_pred ccccccccc--cCCeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccc
Q psy9748 913 ILRLDKILD--MAPITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLD 986 (1359)
Q Consensus 913 ~idL~~iMd--~sPiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~ 986 (1359)
...++++|+ +.++++++++++.++++.|-+ +++||+|++ |+++|+||.+|+++.+.. ....+.
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-----------~~~~v~ 72 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-----------PALDIR 72 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-----------TTSCGG
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-----------CCcCHH
Confidence 467899999 567899999999999994444 679999974 799999999999987641 123466
Q ss_pred cccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 987 KILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 987 ~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
++|+. +.++.+++++.++++.|.+++++.
T Consensus 73 ~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~ 101 (129)
T 3jtf_A 73 SLVRP-AVFIPEVKRLNVLLREFRASRNHL 101 (129)
T ss_dssp GGCBC-CCEEETTCBHHHHHHHHHTSSCCE
T ss_pred HHhCC-CeEeCCCCcHHHHHHHHHhcCCeE
Confidence 77754 789999999999999999988654
No 107
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.20 E-value=2.4e-06 Score=76.83 Aligned_cols=69 Identities=20% Similarity=0.362 Sum_probs=55.8
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCC
Q psy9748 831 SVLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGA 910 (1359)
Q Consensus 831 vviv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~ 910 (1359)
.+++.+++|+.|+.++|.+++++++||++ +++++|+||.+|+...+.... ..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d---~~~lvGIvT~~Di~~~~~~~~-------------------------~~ 53 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME---GDEILGVVTERDILDKVVAKG-------------------------KN 53 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE---TTEEEEEEEHHHHHHHTTTTT-------------------------CC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE---CCEEEEEEEHHHHHHHHHhcC-------------------------CC
Confidence 35678999999999999999999999997 579999999999987642211 01
Q ss_pred CcccccccccccCCeEe
Q psy9748 911 PPILRLDKILDMAPITI 927 (1359)
Q Consensus 911 ~~~idL~~iMd~sPiTV 927 (1359)
....+++++|+++|+||
T Consensus 54 ~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 54 PKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp GGGCBGGGTCEECTTCC
T ss_pred cccCCHHHhcCCCCeEC
Confidence 23467999999999875
No 108
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.19 E-value=3.1e-06 Score=88.01 Aligned_cols=104 Identities=26% Similarity=0.377 Sum_probs=80.9
Q ss_pred ccccccccccC----CeEe--cCCCCHHHHHHHhhc---ceeEEE--cCCCcEEEEEeHHHHHHHHhhccCCC-------
Q psy9748 913 ILRLDKILDMA----PITI--TDQTPMETVCGHTFT---KQLLFP--ANAKRTLEGLRGDSIVRFVQNDTQPQ------- 974 (1359)
Q Consensus 913 ~idL~~iMd~s----PiTV--~~~tpLeeVle~mFr---R~LpVV--degGrLvGIITrkDILr~l~~~~~~~------- 974 (1359)
...++++|.+. ++++ ++++++.++++.|-+ +.+||+ |++|+++|+||.+|+++.+.......
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~ 89 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTS 89 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTC
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccc
Confidence 46899999987 7888 999999999994443 679999 77789999999999999875421100
Q ss_pred ----------CCCCCCCccccccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 975 ----------PLPGAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 975 ----------~~~~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
.........++.++|...+.++.+++++.++++.|.+++++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~ 141 (185)
T 2j9l_A 90 IIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQ 141 (185)
T ss_dssp EEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSE
T ss_pred eeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcE
Confidence 000112345688899889999999999999999999987543
No 109
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.16 E-value=3.8e-06 Score=93.67 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=50.1
Q ss_pred CcccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCC--CcEEEEEeHHHHHHHHhh
Q psy9748 911 PPILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANA--KRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 911 ~~~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdeg--GrLvGIITrkDILr~l~~ 969 (1359)
...+.++++|.+.+++|++++++.++.+.|.+ +.+||+|++ ++++|+||++|+++++..
T Consensus 10 ~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~ 73 (250)
T 2d4z_A 10 KYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQR 73 (250)
T ss_dssp CSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred cCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHH
Confidence 34578999999999999999999999994444 679999863 589999999999987653
No 110
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.13 E-value=2.8e-06 Score=93.30 Aligned_cols=57 Identities=9% Similarity=0.066 Sum_probs=50.3
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhh
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQN 969 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~ 969 (1359)
...++++|.+.++++++++++.++++.|-+ +++||+|++|+++|+||.+|+++++..
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 357999999999999999999999994444 779999988899999999999998753
No 111
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.12 E-value=1.8e-06 Score=88.27 Aligned_cols=93 Identities=9% Similarity=0.217 Sum_probs=76.0
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc---ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT---KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLD 986 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr---R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~ 986 (1359)
...++++|.+ .++++++++++.++++.|-+ +++||+|++ ++++|+||.+|+++.+... ...++.
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~----------~~~~v~ 106 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP----------EQFHLK 106 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG----------GGCCHH
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC----------CcccHH
Confidence 4678999997 68899999999999994433 679999976 4999999999999865321 234577
Q ss_pred cccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 987 KILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 987 ~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
++|+. +.++++++++.++++.|.+++++.
T Consensus 107 ~im~~-~~~v~~~~~l~~a~~~m~~~~~~~ 135 (156)
T 3oi8_A 107 SILRP-AVFVPEGKSLTALLKEFREQRNHM 135 (156)
T ss_dssp HHCBC-CCEEETTSBHHHHHHHHHHTTCCE
T ss_pred HHcCC-CEEECCCCCHHHHHHHHHhcCCeE
Confidence 78865 889999999999999999988654
No 112
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.12 E-value=1.3e-06 Score=90.39 Aligned_cols=101 Identities=7% Similarity=0.119 Sum_probs=76.8
Q ss_pred ccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCC--CC--CC------
Q psy9748 914 LRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQP--QP--LP------ 977 (1359)
Q Consensus 914 idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~--~~--~~------ 977 (1359)
+.++++|.+ .++++++++++.++++ +++ +.+||+|++|+++|+||.+|+++........ .. ..
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~-~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALE-LLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHH-HHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHH-HHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 578899998 8999999999999999 555 6799999888999999999998532111000 00 00
Q ss_pred ----------CCCCccccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 978 ----------GAPPILRLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 978 ----------~~~~~~rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.......+.++|...+.++.++++++++++.|.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~ 130 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFR 130 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTC
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCC
Confidence 01123467889999899999999999999999998863
No 113
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.08 E-value=6.9e-06 Score=81.55 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=70.2
Q ss_pred ccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccccc----
Q psy9748 919 ILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDM---- 991 (1359)
Q Consensus 919 iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~---- 991 (1359)
+|.+.++++++++++.++++.|.+ +.+||+|++|+++|+||.+|+++.+.+.... ....++.++|..
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~m~~~~~~ 89 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYN------DLSLSVGEALMRRSDD 89 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----------CCSBHHHHHHHCC--
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccc------cCCccHHHHHhcCccc
Confidence 888889999999999999994433 6799999878999999999999887542110 112356677765
Q ss_pred --ccEEecCCCCHHHHHHHHHHcCC
Q psy9748 992 --APITITDQTPMETVVDMYKKRSI 1014 (1359)
Q Consensus 992 --~~~tV~~dtpLeel~~lm~~~gI 1014 (1359)
.+.++.+++++.++.+.|.+.++
T Consensus 90 ~~~~~~v~~~~~l~~~~~~m~~~~~ 114 (144)
T 2nyc_A 90 FEGVYTCTKNDKLSTIMDNIRKARV 114 (144)
T ss_dssp ----CEECTTSBHHHHHHHHHHHTC
T ss_pred cCCCeEECCCCcHHHHHHHHHHCCC
Confidence 57899999999999999998875
No 114
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.08 E-value=6.4e-06 Score=83.47 Aligned_cols=95 Identities=12% Similarity=0.129 Sum_probs=74.3
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKIL 989 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im 989 (1359)
.+.++++ +.++++++++++.++++.|.+ +.+||+|++|+++|+||.+|+++.+.....+ ....++.++|
T Consensus 22 ~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~------~~~~~v~~~m 93 (152)
T 2uv4_A 22 ELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN------NLDVSVTKAL 93 (152)
T ss_dssp HHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC------CTTSBGGGGG
T ss_pred HccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh------hhcchHHHHH
Confidence 4566676 678899999999999994433 6799999878999999999999877543211 1123466677
Q ss_pred c------cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 990 D------MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 990 ~------~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
. ..+.++.+++++.++.+.|.+.+++
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~ 125 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVH 125 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCS
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCe
Confidence 5 7788999999999999999998754
No 115
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.07 E-value=4.8e-06 Score=84.62 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=76.8
Q ss_pred cccccccccCC------eEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcc
Q psy9748 914 LRLDKILDMAP------ITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPIL 983 (1359)
Q Consensus 914 idL~~iMd~sP------iTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~ 983 (1359)
..++++|.+.+ +++++++++.++++ +|+ +++||+| +|+++|+||.+|+++.+.....+ ....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~-~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~------~~~~ 78 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIK-LMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS------SKAT 78 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHH-HHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC------SSSC
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHH-HHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC------cccc
Confidence 46889999554 89999999999999 555 6788865 55999999999999987654321 1235
Q ss_pred ccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 984 RLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 984 rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
.+.++|...+.++.+++++.++.+.|.+++++
T Consensus 79 ~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~ 110 (157)
T 4fry_A 79 RVEEIMTAKVRYVEPSQSTDECMALMTEHRMR 110 (157)
T ss_dssp BHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred CHHHHcCCCCcEECCCCcHHHHHHHHHHcCCC
Confidence 67889998999999999999999999998864
No 116
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.04 E-value=9.8e-06 Score=84.86 Aligned_cols=91 Identities=11% Similarity=0.070 Sum_probs=73.7
Q ss_pred cccccccccc--CCeEecCCCCHHHHHHHhhc----ceeEEEcCC-CcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccc
Q psy9748 913 ILRLDKILDM--APITITDQTPMETVCGHTFT----KQLLFPANA-KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRL 985 (1359)
Q Consensus 913 ~idL~~iMd~--sPiTV~~~tpLeeVle~mFr----R~LpVVdeg-GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv 985 (1359)
...++++|.+ .++++++++++.++++ +++ +++||+|++ |+++|+||.+|+++...... ...+
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~-~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~----------~~~v 103 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQ-QLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG----------RVRR 103 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHH-HHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----------SCCG
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHH-HHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC----------cchh
Confidence 3678999974 5789999999999999 555 579999875 79999999999999875431 1223
Q ss_pred ccccccccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 986 DKILDMAPITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 986 ~~im~~~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
. +...+.++.+++++.++++.|.+++++.
T Consensus 104 ~--~~~~~~~v~~~~~l~~al~~m~~~~~~~ 132 (173)
T 3ocm_A 104 N--RLRDPIIVHESIGILRLMDTLKRSRGQL 132 (173)
T ss_dssp G--GSBCCCEECGGGCHHHHHHHHHHSTTCC
T ss_pred H--hcCCCeEECCCCcHHHHHHHHHHcCCeE
Confidence 3 4467789999999999999999998654
No 117
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.01 E-value=7.4e-06 Score=100.51 Aligned_cols=97 Identities=10% Similarity=0.051 Sum_probs=81.3
Q ss_pred cccccccccccCCeEecCC-CCHHHHHHHhhc---ceeEEEc-CCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccc
Q psy9748 912 PILRLDKILDMAPITITDQ-TPMETVCGHTFT---KQLLFPA-NAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLD 986 (1359)
Q Consensus 912 ~~idL~~iMd~sPiTV~~~-tpLeeVle~mFr---R~LpVVd-egGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~ 986 (1359)
....++++|.+.+++++++ +++.++++.|-+ +++||+| ++|+++|+||.+|+++.+..... ....++.
T Consensus 382 ~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~-------~~~~~V~ 454 (527)
T 3pc3_A 382 WSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNR-------QQSDPAI 454 (527)
T ss_dssp TTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCC-------CTTSBGG
T ss_pred cCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccC-------cCCCcHH
Confidence 3578999999999999999 999999994433 6799999 67799999999999998865321 1234688
Q ss_pred cccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 987 KILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 987 ~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
++|...+.++++++++++++++|.++++.
T Consensus 455 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 483 (527)
T 3pc3_A 455 KALNKRVIRLNESEILGKLARVLEVDPSV 483 (527)
T ss_dssp GGEETTCCEEETTSBHHHHHHHHTTCSEE
T ss_pred HHhcCCCeEECCCCcHHHHHHHHhhCCEE
Confidence 99999999999999999999999887753
No 118
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.96 E-value=1.6e-05 Score=85.73 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=76.2
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc-------ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT-------KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLD 986 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr-------R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~ 986 (1359)
..++++|++.++++++++++.++++ .++ ++++|+|++|+++|+||.+|+++. ....++.
T Consensus 54 ~~v~~iM~~~~~~v~~~~tv~eal~-~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~-------------~~~~~v~ 119 (205)
T 3kxr_A 54 NEIGRYTDHQMLVLSDKATVAQAQR-FFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH-------------EPHEPLI 119 (205)
T ss_dssp TCGGGGCBCCCCEEETTCBHHHHHH-HHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS-------------CTTSBGG
T ss_pred chHHhhccCceEEECCCCcHHHHHH-HHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC-------------CCcchHH
Confidence 5689999999999999999999999 554 458999988899999999999742 1234688
Q ss_pred cccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 987 KILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 987 ~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
++|...+.++.++++++++++.|.++++.
T Consensus 120 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 148 (205)
T 3kxr_A 120 SLLSEDSRALTANTTLLDAAEAIEHSREI 148 (205)
T ss_dssp GGCCSSCCCEETTSCHHHHHHHHHTSSCS
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHhcCCC
Confidence 99999999999999999999999999864
No 119
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.93 E-value=7.6e-06 Score=88.39 Aligned_cols=88 Identities=1% Similarity=0.059 Sum_probs=76.3
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKIL 989 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im 989 (1359)
....++|.+.++++++++++.++++ +++ +.+||+|++|+++|+||.+|+.+... ...+.++|
T Consensus 13 ~~~~~~~~~~~~~v~~~~tv~ea~~-~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~-------------~~~v~~im 78 (213)
T 1vr9_A 13 MKVKKWVTQDFPMVEESATVRECLH-RMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL-------------DSSVFNKV 78 (213)
T ss_dssp CBGGGGCBSCSCEEETTCBHHHHHH-HHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT-------------TSBSGGGC
T ss_pred cCHHHhhcCCCeEECCCCcHHHHHH-HHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC-------------CCcHHHHc
Confidence 4678999999999999999999999 555 67999997789999999999976431 13578889
Q ss_pred ccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 990 DMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 990 ~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
...+.+++++++++++.+.|.+++++
T Consensus 79 ~~~~~~v~~~~~l~~a~~~m~~~~~~ 104 (213)
T 1vr9_A 79 SLPDFFVHEEDNITHALLLFLEHQEP 104 (213)
T ss_dssp BCTTCCEETTSBHHHHHHHHHHCCCS
T ss_pred cCCCEEECCCCcHHHHHHHHHHhCCC
Confidence 98999999999999999999999854
No 120
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.88 E-value=1.1e-05 Score=91.43 Aligned_cols=89 Identities=8% Similarity=0.043 Sum_probs=77.1
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhcc---------eeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFTK---------QLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPIL 983 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFrR---------~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~ 983 (1359)
...++++|++.++++++++++.++++ .+++ ++||+|++|+++|+||.+|+++. .+..
T Consensus 136 ~~~v~~iM~~~~~~v~~~~tv~ea~~-~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~-------------~~~~ 201 (286)
T 2oux_A 136 DETAGAIMTTEFVSIVANQTVRSAMY-VLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN-------------DDDT 201 (286)
T ss_dssp TTBHHHHCBSCCCEECSSSBHHHHHH-HHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS-------------CTTS
T ss_pred hHHHHHhCCCCceEECCCCcHHHHHH-HHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC-------------CCCC
Confidence 46789999999999999999999999 6663 39999988899999999999863 1234
Q ss_pred ccccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 984 RLDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 984 rv~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
++.++|...+.+++++++++++++.|.++++.
T Consensus 202 ~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~ 233 (286)
T 2oux_A 202 LIADILNERVISVHVGDDQEDVAQTIRDYDFL 233 (286)
T ss_dssp BHHHHSBSCCCCEETTSBHHHHHHHHHHHTCS
T ss_pred cHHHHcCCCCeeecCCCCHHHHHHHHHHcCCc
Confidence 68889999999999999999999999998853
No 121
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.88 E-value=1.4e-05 Score=71.75 Aligned_cols=66 Identities=14% Similarity=0.233 Sum_probs=50.3
Q ss_pred CeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccccccEEe
Q psy9748 924 PITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPITI 996 (1359)
Q Consensus 924 PiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~~~~tV 996 (1359)
++++++++++.+|.+.|.+ +.+||+|++ +++||||.+|+++.+..... .....+++++|+.+++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~-~lvGIvT~~Di~~~~~~~~~------~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGD-EILGVVTERDILDKVVAKGK------NPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETT-EEEEEEEHHHHHHHTTTTTC------CGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECC-EEEEEEEHHHHHHHHHhcCC------CcccCCHHHhcCCCCeEC
Confidence 6799999999999995555 679999875 99999999999987643221 112346888998877653
No 122
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.86 E-value=2.7e-05 Score=68.29 Aligned_cols=68 Identities=21% Similarity=0.375 Sum_probs=54.5
Q ss_pred EEeCCCCCHHHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEhHHHHHHHHhhhhhccCCCCccceecccCCCCCCCCCCCC
Q psy9748 832 VLTQDSMTVQDVETLLKETEHNGFPVVVSRESQYLVGFVLRRDLNLAIANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAP 911 (1359)
Q Consensus 832 viv~~~~TV~el~~lL~~~~~sgfPVVds~~d~~LVG~Isr~DLl~aL~~~~~~~~~~~~~s~v~F~~~~~~p~~~~~~~ 911 (1359)
+.+++++++.|+.+.|.+++++.+||++ + ++++|+|+.+|+..++..... ..
T Consensus 3 ~~v~~~~~~~~a~~~m~~~~~~~~pV~d--~-~~l~Givt~~dl~~~~~~~~~-------------------------~~ 54 (70)
T 3fio_A 3 IVVQPKDTVDRVAKILSRNKAGSAVVME--G-DEILGVVTERDILDKVVAKGK-------------------------NP 54 (70)
T ss_dssp EEECTTCBHHHHHHHHHHTTCSEEEEEE--T-TEEEEEEEHHHHHHHTTTTTC-------------------------CG
T ss_pred eEECCCCcHHHHHHHHHHcCCCEEEEEE--C-CEEEEEEEHHHHHHHHHHcCC-------------------------Cc
Confidence 4678999999999999999999999998 3 899999999999987632110 02
Q ss_pred cccccccccccCCeEe
Q psy9748 912 PILRLDKILDMAPITI 927 (1359)
Q Consensus 912 ~~idL~~iMd~sPiTV 927 (1359)
....++++|+++++++
T Consensus 55 ~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 55 KEVKVEEIMTKNPVKI 70 (70)
T ss_dssp GGCBGGGTCEECTTCC
T ss_pred ccCCHHHhcCCCCeEC
Confidence 2467899999887653
No 123
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.73 E-value=5.9e-05 Score=84.73 Aligned_cols=88 Identities=11% Similarity=0.130 Sum_probs=75.5
Q ss_pred cccccccccCCeEecCCCCHHHHHHHhhc---------ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccc
Q psy9748 914 LRLDKILDMAPITITDQTPMETVCGHTFT---------KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILR 984 (1359)
Q Consensus 914 idL~~iMd~sPiTV~~~tpLeeVle~mFr---------R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~r 984 (1359)
..++++|++.++++++++++.++++ .++ .++||+|++|+++|+||.+|+++. ....+
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~-~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~-------------~~~~~ 200 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLR-FLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------------DPRTR 200 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHH-HHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS-------------CTTCB
T ss_pred chHHhhcCCCceEECCCCcHHHHHH-HHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC-------------CCCCc
Confidence 5688999999999999999999999 555 358999988899999999999863 12346
Q ss_pred cccccccccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 985 LDKILDMAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 985 v~~im~~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+.++|...+.+++++++++++++.|.++++.
T Consensus 201 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 231 (278)
T 2yvy_A 201 VAEIMNPKVVYVRTDTDQEEVARLMADYDFT 231 (278)
T ss_dssp STTTSBSSCCCEETTSBHHHHHHHHHHHTCS
T ss_pred HHHHhCCCCeEEeCCCCHHHHHHHHHhcCCC
Confidence 7888988999999999999999999998753
No 124
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.60 E-value=9.9e-05 Score=89.48 Aligned_cols=88 Identities=11% Similarity=0.115 Sum_probs=76.0
Q ss_pred ccccccccccCCeEecCCCCHHHHHHHhhc---------ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcc
Q psy9748 913 ILRLDKILDMAPITITDQTPMETVCGHTFT---------KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPIL 983 (1359)
Q Consensus 913 ~idL~~iMd~sPiTV~~~tpLeeVle~mFr---------R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~ 983 (1359)
...++++|++.+++++++++++++.+ .++ .++||+|++++++|+||.+|+++. .+..
T Consensus 154 ~~~v~~iM~~~~v~v~~~~tv~ea~~-~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------------~~~~ 219 (473)
T 2zy9_A 154 EDEAGGLMTPEYVAVREGMTVEEVLR-FLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------------DPRT 219 (473)
T ss_dssp TTBSTTTCBSCEEEECTTCBHHHHHH-HHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-------------CTTS
T ss_pred CCCHHHhCCCCceEeCCCCcHHHHHH-HHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-------------CCCC
Confidence 35688999999999999999999999 555 258999988899999999999862 1234
Q ss_pred ccccccccccEEecCCCCHHHHHHHHHHcCC
Q psy9748 984 RLDKILDMAPITITDQTPMETVVDMYKKRSI 1014 (1359)
Q Consensus 984 rv~~im~~~~~tV~~dtpLeel~~lm~~~gI 1014 (1359)
+++++|+.++.+++++++++++++.|.++++
T Consensus 220 ~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~ 250 (473)
T 2zy9_A 220 RVAEIMNPKVVYVRTDTDQEEVARLMADYDF 250 (473)
T ss_dssp BGGGTSBSSCCCEESSSBHHHHHHHHHHHTC
T ss_pred cHHHHhCCCCeEEeCCCcHHHHHHHHHhcCC
Confidence 6889998899999999999999999999985
No 125
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.57 E-value=7.8e-05 Score=65.35 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=47.7
Q ss_pred CeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccccccE
Q psy9748 924 PITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMAPI 994 (1359)
Q Consensus 924 PiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~~~~ 994 (1359)
++++++++++.++++.|-+ +.+||+|+ |+++|+||++|+++.+.....+ ....+++++|+..+.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~------~~~~~v~~im~~~~~ 68 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKN------PKEVKVEEIMTKNPV 68 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCC------GGGCBGGGTCEECTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCC------cccCCHHHhcCCCCe
Confidence 5789999999999994433 67999998 6999999999999987543211 123457777776544
No 126
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.27 E-value=0.00048 Score=83.93 Aligned_cols=90 Identities=9% Similarity=0.090 Sum_probs=65.0
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc-
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT---KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD- 990 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~- 990 (1359)
..+++|.++|++++++++++++.+.|-+ +.+||+|++++++|+||.+|+.. . .....++.++|+
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~------~------~~~~~~v~diM~p 157 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRF------V------TDLTKSVAAVMTP 157 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTT------C------CCTTSBGGGTSEE
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhh------c------ccCCCcHHHHhcC
Confidence 3467788999999999999999994444 67999998889999999999861 0 112346788888
Q ss_pred c-ccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 991 M-APITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 991 ~-~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
. ++.+++++++++++.+.|.++++..
T Consensus 158 ~~~~vtv~~~~~l~ea~~~m~~~~i~~ 184 (496)
T 4fxs_A 158 KERLATVKEGATGAEVQEKMHKARVEK 184 (496)
T ss_dssp GGGCCEEECC----CGGGTCC---CCC
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCE
Confidence 4 5899999999999999999988654
No 127
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.26 E-value=0.00039 Score=84.49 Aligned_cols=89 Identities=8% Similarity=0.037 Sum_probs=74.1
Q ss_pred cccccccCCeEecCCCCHHHHHHHhhc---ceeEEEc--CCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 916 LDKILDMAPITITDQTPMETVCGHTFT---KQLLFPA--NAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 916 L~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVd--egGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
++++|.++++++++++++.++++.|.+ +.+||+| ++++++|+||.+|+++.. ....++.++|+
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~------------~~~~~v~~im~ 159 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS------------DYNAPISEHMT 159 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS------------CSSSBTTTSCC
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc------------cCCCcHHHHcC
Confidence 467899999999999999999994444 6799998 778999999999998631 12346778888
Q ss_pred c-ccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 991 M-APITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 991 ~-~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
. ++.+++++++++++++.|.++++..
T Consensus 160 ~~~~~~v~~~~~l~~a~~~m~~~~~~~ 186 (491)
T 1zfj_A 160 SEHLVTAAVGTDLETAERILHEHRIEK 186 (491)
T ss_dssp CSCCCCEETTCCHHHHHHHHHHTTCSE
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCE
Confidence 7 8899999999999999999998544
No 128
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.26 E-value=4.3e-05 Score=92.99 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=1.0
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
+++++|.++++++++++++.++++ +++ +.+||+|++++++|+||.+|+++.. + ...++.++|.
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~-~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------~------~~~~v~~im~ 162 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAID-LMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------N------LSKKIKDLMT 162 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHH-HHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------C------CCCcHHHHhC
Confidence 456789999999999999999999 555 5799999878999999999998620 0 2346778888
Q ss_pred c--ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 M--APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~--~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
. .+.+++++++++++.+.|.++++.
T Consensus 163 ~~~~~~~v~~~~~l~ea~~~m~~~~~~ 189 (494)
T 1vrd_A 163 PREKLIVAPPDISLEKAKEILHQHRIE 189 (494)
T ss_dssp ---------------------------
T ss_pred CCCCCeEECCCCCHHHHHHHHHHcCCc
Confidence 7 899999999999999999998854
No 129
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.24 E-value=0.00035 Score=85.49 Aligned_cols=88 Identities=9% Similarity=0.050 Sum_probs=73.0
Q ss_pred cccccccCCeEecCCCCHHHHHHHhhc---ceeEEEcC--CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 916 LDKILDMAPITITDQTPMETVCGHTFT---KQLLFPAN--AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 916 L~~iMd~sPiTV~~~tpLeeVle~mFr---R~LpVVde--gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
.++.|.++|+++++++++.++.+.|-+ ..+||+|+ +++++|+||.+|+.+ . .....++.++|+
T Consensus 115 ~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~------~------~~~~~~V~~vM~ 182 (511)
T 3usb_A 115 SESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF------I------QDYSIKISDVMT 182 (511)
T ss_dssp SSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT------C------CCSSSBHHHHCC
T ss_pred cccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh------h------ccCCCcHHHhcc
Confidence 456788889999999999999994444 67999997 789999999999964 1 112356788998
Q ss_pred c-ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 M-APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~-~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
. ++.+++++++++++.+.|.++++.
T Consensus 183 ~~~~vtv~~~~~l~eal~~m~~~~i~ 208 (511)
T 3usb_A 183 KEQLITAPVGTTLSEAEKILQKYKIE 208 (511)
T ss_dssp CCCCCCEETTCCHHHHHHHHHHHTCS
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCC
Confidence 7 899999999999999999999864
No 130
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.08 E-value=0.0001 Score=90.08 Aligned_cols=85 Identities=5% Similarity=0.028 Sum_probs=0.0
Q ss_pred cccCCeEecCCCCHHHHHHHhhc----ceeEEEcCC---CcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccccc
Q psy9748 920 LDMAPITITDQTPMETVCGHTFT----KQLLFPANA---KRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDMA 992 (1359)
Q Consensus 920 Md~sPiTV~~~tpLeeVle~mFr----R~LpVVdeg---GrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~~ 992 (1359)
|.+.++++++++++.++++ +++ +.+||+|++ ++++|+||.+|+++. . .....++.++|...
T Consensus 103 M~~~~~~v~~~~tv~eal~-~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~---------~~~~~~V~diM~~~ 170 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLA-ISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L---------TQTETKVSDMMTPF 170 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHH-HHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h---------ccccCcHHHHhCCC
Confidence 8888999999999999999 555 569999986 799999999999864 0 01234677889887
Q ss_pred --cEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 993 --PITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 993 --~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
+.+++++++++++.+.|.++++..
T Consensus 171 ~~~~tv~~~~sl~ea~~~m~~~~i~~ 196 (503)
T 1me8_A 171 SKLVTAHQDTKLSEANKIIWEKKLNA 196 (503)
T ss_dssp --------------------------
T ss_pred CCCEEEcCCCcHHHHHHHHHHcCCCE
Confidence 999999999999999999988543
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.78 E-value=0.00025 Score=86.38 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=2.4
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
.++++|.++|+++++++++.++++ +++ ..+||+| +++++|+||.+|+.... ....++.++|+
T Consensus 89 ~~~~~m~~~~v~v~~~~tv~ea~~-~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~------------~~~~~V~~vMt 154 (490)
T 4avf_A 89 KHETAIVRDPVTVTPSTKIIELLQ-MAREYGFSGFPVVE-QGELVGIVTGRDLRVKP------------NAGDTVAAIMT 154 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcccCceEeCCCCcHHHHHH-HHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc------------ccCCcHHHHhc
Confidence 456788889999999999999999 555 5689999 56999999999985311 11245778888
Q ss_pred -c-ccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 991 -M-APITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 991 -~-~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
. ++.+++++++++++.+.|.++++..
T Consensus 155 p~~~~vtv~~~~~l~ea~~~m~~~~i~~ 182 (490)
T 4avf_A 155 PKDKLVTAREGTPLEEMKAKLYENRIEK 182 (490)
T ss_dssp ----------------------------
T ss_pred cCCCCEEECCCCcHHHHHHHHHHcCCCE
Confidence 4 6899999999999999999988553
No 132
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.40 E-value=0.00026 Score=86.56 Aligned_cols=90 Identities=4% Similarity=0.102 Sum_probs=50.2
Q ss_pred ccccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcC---CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccc
Q psy9748 915 RLDKILDMAPITITDQTPMETVCGHTFT----KQLLFPAN---AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDK 987 (1359)
Q Consensus 915 dL~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVde---gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~ 987 (1359)
.++++|.+.|+++++++++.++.+ +++ +.+||+|+ +++++|+||++|+.+... .....++.+
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~-~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~----------~~~~~~v~~ 177 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLE-AKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE----------KDHTTLLSE 177 (514)
T ss_dssp TCCTTSCSSCCCCCC------------------CEESCC--------CCEECTTTTC-----------------------
T ss_pred hhhhccccCCEEECCCCCHHHHHH-HHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh----------ccCCCCHHH
Confidence 456788888999999999999999 555 56999997 479999999999876311 012345778
Q ss_pred cccc--ccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 988 ILDM--APITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 988 im~~--~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
+|.. .+.+++++++++++.+.|.++++.
T Consensus 178 vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~ 207 (514)
T 1jcn_A 178 VMTPRIELVVAPAGVTLKEANEILQRSKKG 207 (514)
T ss_dssp ---CCBCCCCEETTCCSTTTTTHHHHHTCS
T ss_pred HhCCCCCCeEECCCCCHHHHHHHHHHcCCC
Confidence 8888 899999999999999999998854
No 133
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.33 E-value=0.00063 Score=82.71 Aligned_cols=85 Identities=11% Similarity=0.150 Sum_probs=0.8
Q ss_pred cccccccCCeEecCCCCHHHHHHHhhc----ceeEEEcCCCcEEEEEeHHHHHHHHhhccCCCCCCCCCCcccccccccc
Q psy9748 916 LDKILDMAPITITDQTPMETVCGHTFT----KQLLFPANAKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILDM 991 (1359)
Q Consensus 916 L~~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVdegGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~~ 991 (1359)
+++.|..+++++++++++.++.+ +++ ..+||+|+ ++++|+||.+|++. . ...+++++|..
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~-~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~-----------~~~~v~~im~~ 158 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALF-LMEKHGIDGLPVVED-EKVVGIITKKDIAA---R-----------EGKLVKELMTK 158 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHH-HHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C-----------CCCCHHHHccC
Confidence 34567788999999999999999 555 56899998 69999999999975 0 12357788888
Q ss_pred ccEEecCCCCHHHHHHHHHHcCCCc
Q psy9748 992 APITITDQTPMETVVDMYKKRSISV 1016 (1359)
Q Consensus 992 ~~~tV~~dtpLeel~~lm~~~gI~l 1016 (1359)
++.+++++++++++.+.|.++++..
T Consensus 159 ~~~~v~~~~~l~eal~~m~~~~~~~ 183 (486)
T 2cu0_A 159 EVITVPESIEVEEALKIMIENRIDR 183 (486)
T ss_dssp -------------------------
T ss_pred CCeEECCcCcHHHHHHHHHHcCCCE
Confidence 8899999999999999999987544
No 134
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.22 E-value=0.00077 Score=81.52 Aligned_cols=84 Identities=8% Similarity=0.132 Sum_probs=0.4
Q ss_pred cccccCCeEecCCCCHHHHHHHhhc----ceeEEEcC---CCcEEEEEeHHHHHHHHhhccCCCCCCCCCCccccccccc
Q psy9748 918 KILDMAPITITDQTPMETVCGHTFT----KQLLFPAN---AKRTLEGLRGDSIVRFVQNDTQPQPLPGAPPILRLDKILD 990 (1359)
Q Consensus 918 ~iMd~sPiTV~~~tpLeeVle~mFr----R~LpVVde---gGrLvGIITrkDILr~l~~~~~~~~~~~~~~~~rv~~im~ 990 (1359)
..|..+|++++|+.++.++.+ +.+ .-+||+|+ +++|+||||.+|+. +. + ...++.++|+
T Consensus 142 ~g~i~dPvtl~P~~Tv~da~~-l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r-f~------d------~~~~V~evMT 207 (556)
T 4af0_A 142 NGFITDPLCLGPDATVGDVLE-IKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-FQ------D------AETPIKSVMT 207 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccCCCeEcCCCCCHHHHHH-HHHHhCCCccccccccCcCCEEEEEEeccccc-cc------c------cceEhhhhcc
Confidence 456678999999999999999 655 34899986 47999999999973 21 1 1246788999
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS 1015 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~ 1015 (1359)
...++++.+++++++.++|.++.+.
T Consensus 208 ~~lvt~~~~~~leeA~~iL~~~kie 232 (556)
T 4af0_A 208 TEVVTGSSPITLEKANSLLRETKKG 232 (556)
T ss_dssp -------------------------
T ss_pred cceEEecCCCCHHHHHHHHHHcccc
Confidence 9999999999999999999988754
No 135
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=83.35 E-value=0.9 Score=42.37 Aligned_cols=59 Identities=5% Similarity=0.135 Sum_probs=47.2
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCc-cchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNG-QKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~-~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|++ +++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 14 dg~~~v~G~~~l~dl~~~l---~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 76 (90)
T 2p13_A 14 DGTWLMDGWISIRKASNLL---EHDLVDEAERYSTLGGYLLWQFGYIPAAGEQITVDGLIFEIVSV 76 (90)
T ss_dssp TSCEEEETTSBHHHHHHHH---TSCCCCTTCCCCBHHHHHHHHHSSCCCTTCEEEETTEEEEECCB
T ss_pred CCEEEEECcCCHHHHHHHH---CCCCCCcCCCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEE
Confidence 4578999999999999876 5567753 56889999999999987 7777777677777764
No 136
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=82.39 E-value=0.76 Score=43.31 Aligned_cols=59 Identities=10% Similarity=0.183 Sum_probs=44.4
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCc--cchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNG--QKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~--~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|++ +++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 17 dg~~~v~G~~~l~dl~~~l---~~~l~~~~~~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 80 (94)
T 2oai_A 17 DGSFLIDGTLPIEELREVL---GAELPDGEENNYHTLAGMCISYFGRIPHVGEYFDWAGWRIEIVDL 80 (94)
T ss_dssp TSCEEEETTCBHHHHHHHH---TC-------CCCSBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEE
T ss_pred CCeEEEeccCCHHHHHHHh---CCCCCcccCCCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEE
Confidence 4579999999999998876 5567753 56889999999999977 7777777777777774
No 137
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=82.16 E-value=0.74 Score=42.55 Aligned_cols=59 Identities=10% Similarity=-0.016 Sum_probs=46.8
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC-cCCc--cchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS-VTNG--QKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~-lp~~--~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++. +|++ +++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 8 dg~~~v~G~~~l~dl~~~l---~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 72 (86)
T 2pls_A 8 DGSWLLDGLIAVPELKDTL---GLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDM 72 (86)
T ss_dssp TSCEEEETTCBHHHHHHHH---TCSCCTTTTSCSCCBHHHHHHHHHTSCCCTTCEEEETTEEEEEEEE
T ss_pred CCeEEEEcccCHHHHHHHh---CCCcCCCccCCCcccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEe
Confidence 3568899999999999876 455 6653 56889999999999987 7777777777777764
No 138
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=81.94 E-value=0.74 Score=43.08 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=46.7
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|+ +++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 17 dg~~~v~G~~~l~dl~~~l---~~~l~~-~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~~f~V~~~ 77 (91)
T 2pli_A 17 SERWRIHAATEIEDINTFF---GTEYSS-EEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARA 77 (91)
T ss_dssp TTEEEEETTCBHHHHHHHH---CCCCCC-SSCCBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEcCCCHHHHHHHh---CCCCCC-CCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEE
Confidence 4578999999999998876 566775 46889999999999977 7777777777777774
No 139
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=81.80 E-value=0.73 Score=42.39 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=46.2
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|+ +++.|++|++.+.++++ |+.+.+..+.++|.+.
T Consensus 8 dg~~~v~G~~~l~dl~~~l---~~~l~~-~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 68 (83)
T 3llb_A 8 SGDFIVKALTPVDAFNDFF---GSEFSD-EEFDTVGGLVMSAFGHLPKRNEVVELGEFRFRVLNA 68 (83)
T ss_dssp TSCEEEETTCBHHHHHHHH---CCCCCT-TTCSBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEccCCHHHHHHHh---CCCCCC-CCCcCHHHHHHHHhCcCCCCCCEEEECCEEEEEEEe
Confidence 4578999999999998875 466774 57789999999999987 6777777777777664
No 140
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=81.66 E-value=0.57 Score=43.33 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=46.8
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC-cCCccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS-VTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~-lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++. +|+++++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 8 dg~~~v~G~~~l~dl~~~l---~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 70 (86)
T 2p4p_A 8 EDSWLIDGATPLEDVMRAL---NIHTFPRDENYETIGGFMMYMLRXIPXXTDFVLYDXYXFEIIDT 70 (86)
T ss_dssp CSEEEEETTSBHHHHHHHT---TCCCSCCSCSSCBHHHHHHHHHCSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEccCCHHHHHHHh---CCCCCCcCCCCccHHHHHHHHhCCCCCCCcEEEEeeEEEEEEEc
Confidence 3568999999999998865 564 665467899999999999987 7777777777777764
No 141
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=81.28 E-value=0.62 Score=45.59 Aligned_cols=59 Identities=5% Similarity=0.110 Sum_probs=46.8
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC--cCC--ccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS--VTN--GQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~--lp~--~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+.+.++|+++.+.+ ++. +|+ .+++.|++|++.+.++.+ |..+.+..+.++|.+.
T Consensus 34 dg~~~v~G~~~l~dl~e~l---g~~~~l~~~~~~~~dTlgGlil~~lg~iP~~Gd~v~~~g~~f~V~~~ 99 (113)
T 3ded_A 34 DGSWLVDGMVSLDRFREFF---ELEAPLPGEAGGNIHTLAGVMLYQLGRVPSVTDRFEWNGFSFEVVDM 99 (113)
T ss_dssp TSCEEEETTCBHHHHHHHT---TCCSCCTTGGGTCCCBHHHHHHHHHCSSCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEecccCHHHHHHHh---CCCccCCcccCCCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEE
Confidence 4579999999999998865 566 775 367889999999999987 7777777777777664
No 142
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=76.70 E-value=0.99 Score=41.27 Aligned_cols=58 Identities=9% Similarity=0.205 Sum_probs=45.4
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|+ +++.|++|++.+.++++ |+...+..+.++|.+.
T Consensus 8 dg~~~v~g~~~l~dl~~~l---~~~l~~-~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 68 (81)
T 3lae_A 8 DGSMIIDGSANLRDLNKMF---NWELDT-EDARTFNGLILEHLEEIPDEGTICEIDGLLITILEV 68 (81)
T ss_dssp TSCEEEETTCBHHHHHHHH---CCCCCC-SSCSBHHHHHHHHCSSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEeeCCHHHHHHHh---CCCCCC-CCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEe
Confidence 3468999999999998875 566774 56789999999999886 6666666666776663
No 143
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=75.69 E-value=1.3 Score=41.50 Aligned_cols=58 Identities=7% Similarity=0.111 Sum_probs=45.6
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---HhhccC--CCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GNKLGI--PDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~~~ni--~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+ ++.+|+ +++.|++|++.+.++++ |..+.+ ..+.++|.+.
T Consensus 15 dg~~~v~G~~~l~dl~~~l---~~~l~~-~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~~f~V~~~ 77 (93)
T 2r2z_A 15 DNEYLVQGRMLIDEFNEVF---ETDLHM-SDVDTMAGYLITALGTIPDEGEKPSFEVGNIKLTAEEM 77 (93)
T ss_dssp TTEEEEETTSBHHHHHHHH---TCCCCC-TTCCBHHHHHHHHHSSCCCTTCCCEEEETTEEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHh---CCCCCC-CCcccHHHHHHHHhCCCCCCCCEEEEecCCEEEEEEEe
Confidence 4578999999999999876 556765 46889999999999987 666655 5566777764
No 144
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=74.57 E-value=0.67 Score=43.41 Aligned_cols=59 Identities=7% Similarity=0.081 Sum_probs=45.9
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCC-cCCccchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSIS-VTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~-lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+.+.++++++.+.+ ++. +|+++++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 16 dg~~~v~G~~~l~dl~~~l---~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 78 (92)
T 2o3g_A 16 DESLTVEGALEYVELAPQL---NLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEK 78 (92)
T ss_dssp -CCSEEETTCBHHHHTTTT---TCCCCCTTCSCSBHHHHHHHHHTSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEccCCHHHHHHHh---CCCCCCcCCCcccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEe
Confidence 3468899999999988764 566 774457889999999999977 7777777677777764
No 145
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=72.80 E-value=1.6 Score=40.32 Aligned_cols=57 Identities=5% Similarity=0.049 Sum_probs=42.4
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---Hh--hccCCC----cccceec
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GN--KLGIPD----CMKDVHK 1051 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~--~~ni~~----~~~~I~k 1051 (1359)
...+.+++.++++++.+.+ ++.+|+ +++.|++|++.+.++++ |. .+.+.. +.++|.+
T Consensus 7 dg~~~v~G~~~l~dl~~~l---~~~l~~-~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~~~~~~~f~V~~ 72 (87)
T 2rk5_A 7 DNTYIVLGTMTLNDFNEYF---ETDLES-DNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLELINDK 72 (87)
T ss_dssp TTEEEEETTSBHHHHHHHH---TCCCCC-TTCCBHHHHHHHHHCSCCCSSSCCEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEccCCHHHHHHHh---CCCCCC-CCcccHHHHHHHHhCcCCCCCCcEEEEECCceEEEEEEEEE
Confidence 3468899999999999876 556775 46889999999999977 55 444444 4455554
No 146
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=72.59 E-value=2.1 Score=41.10 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=46.1
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCccchhHHHHHHHHHHHHH---HhhccCCCcccceeccc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNGQKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKAH 1053 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~~ 1053 (1359)
...+.+++.++++++.+.+ ++.+|+ ++++|++|++.+.++++ |+.+.+. +.++|.+..
T Consensus 11 dg~~~v~G~~~l~dl~~~l---g~~l~~-e~~dTlgGli~~~lg~iP~~Gd~v~~~-~~f~V~~~d 71 (101)
T 2p3h_A 11 PDKWLIDGDTPLDEVERAI---GYELPE-GDYETISGLLFDHANALLKTGDVIEIP-LDFEPEDYL 71 (101)
T ss_dssp TTEEEEETTCBHHHHHHHH---TSCCCC-SSCCBHHHHHHHHHCSCCCTTCEEEEE-CCCCGGGGT
T ss_pred CCEEEEEccCCHHHHHHHh---CCCCCC-CCCccHHHHHHHHhCCCCCCCCEEEEe-EEEEEEEEe
Confidence 4578999999999999876 556765 47889999999999977 7766666 667777643
No 147
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=71.53 E-value=1.5 Score=41.02 Aligned_cols=57 Identities=11% Similarity=0.053 Sum_probs=45.1
Q ss_pred cccEEecCCCCHHHHHHHHHHcCCCcCCc------cchhHHHHHHHHHHHHH---HhhccCCCcccceecc
Q psy9748 991 MAPITITDQTPMETVVDMYKKRSISVTNG------QKEIFLMRFLWDRWETL---GNKLGIPDCMKDVHKA 1052 (1359)
Q Consensus 991 ~~~~tV~~dtpLeel~~lm~~~gI~lp~~------~~~~tl~gli~eLl~~I---g~~~ni~~~~~~I~k~ 1052 (1359)
...+.+++.++++++.+.+.. |+. +++.|++|++.+.++++ |..+.+..+.++|.+.
T Consensus 14 dg~~~v~G~~~l~dl~~~l~~-----~~~~~~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~ 79 (93)
T 2nqw_A 14 DGSYLFEGKTSLSDVRHYLDL-----PENAFGELGDEVDTLSGLFLEIKQELPHVGDTAVYEPFRFQVTQM 79 (93)
T ss_dssp TSCEEEETTCBHHHHHHHHTC-----CTTTTHHHHTTCSBHHHHHHHHHCSCCCTTCEEEETTEEEEEEEE
T ss_pred CCEEEEEcccCHHHHHHHhCC-----CcccccccCCCcccHHHHHHHHhCcCCCCCCEEEECCEEEEEEEe
Confidence 457899999999999988743 432 56889999999999987 7777777777777764
No 148
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=47.98 E-value=26 Score=38.30 Aligned_cols=131 Identities=15% Similarity=0.177 Sum_probs=79.9
Q ss_pred HHHHHHHHHHcC---CCcCCccc-h-hHHHHHHHHHHHHHHhhccCCCcccceeccccccccc---cCCccceEEeeecc
Q psy9748 1002 METVVDMYKKRS---ISVTNGQK-E-IFLMRFLWDRWETLGNKLGIPDCMKDVHKAHRVNTLA---KNKIKPIVVRLSNT 1073 (1359)
Q Consensus 1002 Leel~~lm~~~g---I~lp~~~~-~-~tl~gli~eLl~~Ig~~~ni~~~~~~I~k~~Ri~~~~---~~~~~~iiv~~~~~ 1073 (1359)
+.|+-+.+.+.+ +.+|+.++ . .....++-+++...+..+. ......|..++|.+... ...+|.|||+|..-
T Consensus 43 L~dL~d~iRr~NIRIiGVPEgee~~~kgaenlf~eII~EnfPnL~-ke~diqV~ea~Rsp~~~~~kr~tPR~IIvK~~~~ 121 (233)
T 2yko_A 43 LQEIWDYVKRPNLRLIGVPESDVENGTKLENTLQDIIQENFPNLA-RQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKV 121 (233)
T ss_dssp HHHHHHHHTTTEEEEESCCCCTTCCHHHHHHHHHHHHHHHCTTCC----CCCEEEEEEC-------CCSCCCEEEEESSH
T ss_pred HHHHHHhhcccceeEeecCCCcccccccHHHHHHHHHHHhCCCCc-cccceeeechhcCCCCCCCCCCCCCeEEEEeccc
Confidence 566666666666 45677655 3 3466777778777765442 12334588899987432 34578899999999
Q ss_pred ccccccccccccc-cc-c-hhhcccch----HhHHHHHHHHHHHHHhhhhcCccceeecccchhhhcc
Q psy9748 1074 SVRDKWTTASRSK-QL-Y-KEKIYINE----HLTKANQDLLFKAKKLKEANGYKFVWVRDCKIMIRKN 1134 (1359)
Q Consensus 1074 ~~~~~~~~~~~~~-~~-~-~~~iyiNe----~Lt~~~~~L~~~a~~~~k~~~~k~~w~~~~~i~~rk~ 1134 (1359)
..|.+++.+++.+ ++ | ..+|-+.. .+-|..|+ +...-+..|++|+++=|.=..+.-.+.+
T Consensus 122 ~~KErILkaaR~k~~vtykG~pIrlsaDfSaeTLq~RRe-w~~Ifk~Lk~knlqpRilyPakLsf~~e 188 (233)
T 2yko_A 122 EMKEKMLRAAREKGRVTLKGKPIRLTVDLSAETLQARRE-WGPIFNILKEKNFQPRISYPAKLSFISE 188 (233)
T ss_dssp HHHHHHHHHHHTTSCEEETTEEEEEEECCCHHHHHHHHH-THHHHHHHHHTTCCCEEETTTEEEEESS
T ss_pred ccHHHHHHHHHHhcccccCCCceEEeCCCCHHHHHHHHH-HhHHHHHHHHcCCCcccccccceEEEEc
Confidence 8899888777655 33 1 23333333 23333333 4445566799999999976666555444
No 149
>2w7a_A LINE-1 ORF1P; RNA-binding protein; HET: MSE; 1.40A {Homo sapiens}
Probab=30.62 E-value=15 Score=35.19 Aligned_cols=70 Identities=21% Similarity=0.213 Sum_probs=41.2
Q ss_pred CCcCCccchhH--HHHHHHHHHHHHHhhc--cCCCcccceeccccccccc---cCCccceEEeeeccccccccccccccc
Q psy9748 1014 ISVTNGQKEIF--LMRFLWDRWETLGNKL--GIPDCMKDVHKAHRVNTLA---KNKIKPIVVRLSNTSVRDKWTTASRSK 1086 (1359)
Q Consensus 1014 I~lp~~~~~~t--l~gli~eLl~~Ig~~~--ni~~~~~~I~k~~Ri~~~~---~~~~~~iiv~~~~~~~~~~~~~~~~~~ 1086 (1359)
+.+|+.+.... ...++-+++..-+..+ ..++ .|..++|.+... ...+|.|||+|..-..|.+++.+++.+
T Consensus 9 iGvPE~e~~k~~~~e~lf~eIi~enfPnL~ke~~i---~v~ea~Rsp~~~~~kr~tPRhIIvK~~~~~~KErILkaar~k 85 (100)
T 2w7a_A 9 IGVPESDVENGTKLENTLQDIIQENFPNLARQANV---QIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREK 85 (100)
T ss_dssp ECCCCCTTCCHHHHHHHHHHHHHHHCHHHHHHTCC---CEEEEEEESSSCCSSCCSCCEEEEEESCHHHHHHHHHHHHHH
T ss_pred EeCCCCccccchhHHHHHHHHHHHHCcCcccchhh---hhhhhhcCCCccCCCCCCCCeEEEEecccccHHHHHHHHHHh
Confidence 34566522111 4566667766643222 2333 478899977432 336788999998877777666554433
Done!