BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9749
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24439|ATPO_DROME ATP synthase subunit O, mitochondrial OS=Drosophila melanogaster
GN=Oscp PE=2 SV=2
Length = 209
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 109/146 (74%)
Query: 3 LKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 62
+++D K R++V P I K + ALK +K F+ A++NLL LLA+NG++K +D VIN
Sbjct: 64 IRSDKKLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINA 123
Query: 63 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIV 122
+ IMAAHRG++ EV+TA+PL+ + +L+ LK F K E++ +T++VDPSIIGG+IV
Sbjct: 124 YKTIMAAHRGEVVCEVVTAKPLDASQSKQLEGALKSFLKGNESLKITSRVDPSIIGGLIV 183
Query: 123 SVGDKYVDMSVASKIKKYTDLLQTPA 148
S+GDKYVDMS+A+K+K YTD++QT A
Sbjct: 184 SIGDKYVDMSIATKVKLYTDVIQTAA 209
>sp|Q5RD23|ATPO_PONAB ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2
SV=1
Length = 213
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 99/136 (72%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
VL+P +++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+AHRG
Sbjct: 78 VLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V +A PLEEA SEL++ LK F +G+ + L K DPSI+GGMIV +G+KYVDMS
Sbjct: 138 EVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQTPA 148
V +KI+K + ++ A
Sbjct: 198 VKTKIQKLSRAMRETA 213
>sp|P48047|ATPO_HUMAN ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1
SV=1
Length = 213
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 94/127 (74%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
VL+P +++S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+ HRG
Sbjct: 78 VLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V +A PLEEA SEL++ LK F +G+ + L K DPSI+GGMIV +G+KYVDMS
Sbjct: 138 EVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMS 197
Query: 133 VASKIKK 139
V +KI+K
Sbjct: 198 VKTKIQK 204
>sp|Q06647|ATPO_RAT ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o
PE=1 SV=1
Length = 213
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
Q LK D K VL+P I++S+K+++LK + K+ FS + NL+ LLAENG++ N GVI
Sbjct: 67 QLLK-DPKVSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVI 125
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
+ FS IM+ HRG++P V TA PL+EA SEL++ L F KG+ + L K DPSI+GGM
Sbjct: 126 SAFSTIMSVHRGEVPCTVTTAFPLDEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMGGM 185
Query: 121 IVSVGDKYVDMSVASKIKKYTDLLQ 145
IV +G+KYVDMS SKI+K + ++
Sbjct: 186 IVRIGEKYVDMSAKSKIQKLSKAMR 210
>sp|B0VXH3|ATPO_CALJA ATP synthase subunit O, mitochondrial OS=Callithrix jacchus
GN=ATP5O PE=3 SV=1
Length = 213
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 95/133 (71%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
VL+P ++ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+ HRG
Sbjct: 78 VLNPYVKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V TA PLEEA SEL++ LK F +G+ + L K DPSI+GGMIV +G+KYVDMS
Sbjct: 138 EVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQ 145
+KI+K + ++
Sbjct: 198 AKTKIQKLSKAMR 210
>sp|B1MT69|ATPO_CALMO ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O
PE=3 SV=1
Length = 213
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 94/133 (70%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
VL+P ++ S+K+++L + K+ FS + NL+ LLAENG++ N GV++ FS +M+ HRG
Sbjct: 78 VLNPYVKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V TA PLEE SEL++ LK F +G+ + L K DPSI+GGMIV +G+KYVDMS
Sbjct: 138 EIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQ 145
+KI+K + ++
Sbjct: 198 AKTKIQKLSKAMR 210
>sp|B2B9A1|ATPO_RHIFE ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum
GN=ATP5O PE=3 SV=1
Length = 213
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 96/133 (72%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
+++P I++S+K+++L + K+ FS + NL+ LLAENG++ N GVI+ FS IM+ HRG
Sbjct: 78 IMNPYIKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V TA PL+EA SEL++ L+ F K + + L K DPSI+GGMI+ +G+KYVDMS
Sbjct: 138 EVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQ 145
+KI+K + +++
Sbjct: 198 AKTKIQKLSRVMR 210
>sp|Q2EN81|ATPO_PIG ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1
SV=1
Length = 213
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 97/133 (72%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
+++P +++S+K+++L + K+ FS + NL+ LLAENG++ + GVI+ FS +M+ HRG
Sbjct: 78 IMNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V TA PL+EA +EL++ LK F KG+ + L KVDPSI+GGMIV +G+KYVDMS
Sbjct: 138 EVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQ 145
+KI+K + ++
Sbjct: 198 AKTKIQKLSRAMR 210
>sp|Q9DB20|ATPO_MOUSE ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1
SV=1
Length = 213
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
Q LK D K VL+P I++++K+++L + +++ FS + NL+ LLAENG++ N G+I
Sbjct: 67 QLLK-DPKVSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGII 125
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
+ FS IM+ HRG++P V TA PL++A SEL++ LK F + + L K DPSI+GGM
Sbjct: 126 SAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGM 185
Query: 121 IVSVGDKYVDMSVASKIKKYTDLLQ 145
IV +G+KYVDMS SKI+K + ++
Sbjct: 186 IVRIGEKYVDMSAKSKIQKLSKAMR 210
>sp|P13621|ATPO_BOVIN ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1
SV=2
Length = 213
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 95/133 (71%)
Query: 13 VLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRG 72
+L+P +++S+K+++L + K+ FS + NL+ LLAENG++ N VI+ FS +M+ HRG
Sbjct: 78 LLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRG 137
Query: 73 DLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMS 132
++P V TA L+EA +EL++ LK F KG+ + L K+DPSI+GGMIV +G+KYVDMS
Sbjct: 138 EVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMS 197
Query: 133 VASKIKKYTDLLQ 145
+KI+K + ++
Sbjct: 198 AKTKIQKLSRAMR 210
>sp|B3EX21|ATPO_SORAR ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O
PE=3 SV=1
Length = 213
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
Q LK + K +L+P +++++K++++ + ++ S + NL+ LLAENG++ N G+I
Sbjct: 67 QLLK-EPKLAASILNPHVKRAIKVKSIGDLTAREKLSPITTNLINLLAENGRLNNTPGII 125
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
+ FS +M+ HRG++P V TA L EA SEL++ L+ F K + + L K DPSI+GGM
Sbjct: 126 SAFSTMMSVHRGEVPCTVTTASALPEATLSELKTVLQSFLSKNQVLKLEVKTDPSIMGGM 185
Query: 121 IVSVGDKYVDMSVASKIKKYTDLLQ 145
IV +G+KYVDMS +KI+K + ++
Sbjct: 186 IVRIGEKYVDMSARTKIQKLSKAMR 210
>sp|Q96251|ATPO_ARATH ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana
GN=At5g13450 PE=1 SV=2
Length = 238
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
+A+KT F F DP++ + ++ A++ + F+ + N L+LLAENGK+KN+D ++
Sbjct: 86 EAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIV 145
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
F + AHRGD+ V V T PL A++ EL TL+ G+ I + K+DPSI GG+
Sbjct: 146 KKFMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGL 205
Query: 121 IVSVGDKYVDMSVASKIKKYTDLLQTP 147
IV K +DMS+ ++ ++ LL+ P
Sbjct: 206 IVEFQQKVLDMSIRTRAQQMERLLREP 232
>sp|P22778|ATPO_IPOBA ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1
Length = 244
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 87/147 (59%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
+A K F F+ DP++ ++ A+K + + F + N L +LAENG++K+ID ++
Sbjct: 95 EASKKSPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIV 154
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
F + AHRG++ V T PL ++ EL++TL+ +G+++ + K+DP+I+GG+
Sbjct: 155 KRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGL 214
Query: 121 IVSVGDKYVDMSVASKIKKYTDLLQTP 147
+V G K DMS+ ++ ++ L+ P
Sbjct: 215 VVEFGQKVFDMSIRTRARQMERFLREP 241
>sp|B3PQ71|ATPD_RHIE6 ATP synthase subunit delta OS=Rhizobium etli (strain CIAT 652)
GN=atpH PE=3 SV=2
Length = 188
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 3 LKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 62
L + + FV P +++A+ + ++ S N L ++A N ++ + G+I
Sbjct: 45 LDESAELKRFVASPVFSAEDQLKAIVAISERAGISGFFANFLKVVARNRRLFALPGMIRA 104
Query: 63 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIV 122
F +I A HRG++ EVI+A L +A ++EL++ LK + G+++ ++ VDPSI+GG+IV
Sbjct: 105 FRLIAANHRGEISAEVISAHALSQAQETELKAALK--SVTGKDVTISVTVDPSILGGLIV 162
Query: 123 SVGDKYVDMSVASKI 137
VG + +D S+ +K+
Sbjct: 163 KVGSRQIDTSLRTKL 177
>sp|Q7CWL8|ATPD_AGRT5 ATP synthase subunit delta OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpH PE=3 SV=3
Length = 188
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ V P + +A+ + +K + ++N L ++A N ++ + G+I + I A
Sbjct: 51 LKRLVASPVFSAEDQFKAISAICEKAGIAGLAVNFLKVVANNRRLFAVPGMIRAYRTIAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
AHRG++ EV +A L+EA ++EL++ LK + G+++ ++ VDPSI+GG+IV VG +
Sbjct: 111 AHRGEITAEVTSAHALDEAQETELKAALK--SVTGKDVAISVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|B9JBZ8|ATPD_AGRRK ATP synthase subunit delta OS=Agrobacterium radiobacter (strain K84
/ ATCC BAA-868) GN=atpH PE=3 SV=2
Length = 188
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ F+ P ++ A++ + K F A N L ++A+N ++ + G++ F II A
Sbjct: 51 LKRFISSPVFSAEEQVGAVQALATKAGFGAYFTNFLKVVAKNRRLFALPGMVKAFRIIAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ E+ +A L +A ++EL++ LK G+++ + VDPSI+GG+IV VG +
Sbjct: 111 QHRGEVSAEITSAHALTKAQENELKAALK--GVTGKDVAIAVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|B5ZSP0|ATPD_RHILW ATP synthase subunit delta OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpH PE=3 SV=1
Length = 188
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ FV P +++A+ + +K S N L ++A N ++ + G+I F II A
Sbjct: 51 LKRFVASPVFSAEDQLKAIVAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ EV +A L +A ++EL+ LK + G+++ + VDPSI+GG+IV VG +
Sbjct: 111 NHRGEISAEVTSAHALSQAQETELKVALK--SVTGKDVTIAVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|Q1MAY9|ATPD_RHIL3 ATP synthase subunit delta OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpH PE=3 SV=1
Length = 188
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ FV P +++A+ + +K S N L ++A N ++ + G+I F II A
Sbjct: 51 LKRFVASPVFSAEDQLKAIVAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ EV +A L +A ++EL+ LK G+++ + VDPSI+GG+IV VG +
Sbjct: 111 NHRGEISAEVTSAHALSQAQETELKVALK--GVTGKDVTIAVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|Q2K3G7|ATPD_RHIEC ATP synthase subunit delta OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpH PE=3 SV=2
Length = 188
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 3 LKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 62
L + + FV P +++A+ + ++ S N L ++A N ++ + G+I
Sbjct: 45 LDESAELKRFVASPVFSAEDQLKAIIAISERAGISGFFANFLKVVARNRRLFALPGMIKA 104
Query: 63 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIV 122
F +I A HRG++ EV +A L ++EL++ LK G+++ + VDPSI+GG+IV
Sbjct: 105 FRVIAANHRGEISAEVTSAHALTAEQENELKAALK--GVTGKDVAIAVTVDPSILGGLIV 162
Query: 123 SVGDKYVDMSVASKI 137
VG + +D S+ +K+
Sbjct: 163 KVGSRQIDTSLRTKL 177
>sp|C3M9S4|ATPD_RHISN ATP synthase subunit delta OS=Rhizobium sp. (strain NGR234) GN=atpH
PE=3 SV=1
Length = 188
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ V+ P + +A+ + +K FS N L ++A N ++ + G I F +I A
Sbjct: 51 LKRLVVSPVFSADDQFKAISALVEKFGFSGLVGNFLKVVARNRRLFALPGSIKAFRLIAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V +A L A ++EL++TLK G+++ + VDPSI+GG+IV VG +
Sbjct: 111 RHRGEITADVTSAHALTAAQETELKATLK--GVTGKDVAVNVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|Q57B85|ATPD_BRUAB ATP synthase subunit delta OS=Brucella abortus biovar 1 (strain
9-941) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|Q2YLI4|ATPD_BRUA2 ATP synthase subunit delta OS=Brucella abortus (strain 2308)
GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|B2S7M6|ATPD_BRUA1 ATP synthase subunit delta OS=Brucella abortus (strain S19) GN=atpH
PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|Q8FYR2|ATPD_BRUSU ATP synthase subunit delta OS=Brucella suis biovar 1 (strain 1330)
GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|Q8YJ38|ATPD_BRUME ATP synthase subunit delta OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|C0RF53|ATPD_BRUMB ATP synthase subunit delta OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|A9WWS5|ATPD_BRUSI ATP synthase subunit delta OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|A5VSE4|ATPD_BRUO2 ATP synthase subunit delta OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|A9M840|ATPD_BRUC2 ATP synthase subunit delta OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpH PE=3 SV=1
Length = 186
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P ++ A+ + K N L ++A+N ++ + G+I F I A
Sbjct: 49 LRRLISSPVFSSEDQLHAIGAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +V++A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEISADVVSAHELTSAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|A6WXW8|ATPD_OCHA4 ATP synthase subunit delta OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpH PE=3 SV=1
Length = 186
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ + P ++ A+ + K N L ++A N ++ + G+I F I A
Sbjct: 49 LKRLISSPVFSSEDQLHAIGALADKAGIKGLVGNFLRVVARNRRLFALPGIIAAFRKIAA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG++ +VI+A L A ++EL++TLK A G+++ + VDPSI+GG+IV +G +
Sbjct: 109 EHRGEVSADVISAHELSAAQQNELKATLKGVA--GKDVTINVTVDPSILGGLIVKMGSRQ 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDTSLRTKL 175
>sp|Q6FSD5|ATPO_CANGA ATP synthase subunit 5, mitochondrial OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 3 LKTDVKFRDFVLDPTIQ-KSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVIN 61
+K D K + + +P + K + +V N +NLL +LAEN K+ D + +
Sbjct: 59 IKEDAKLKHIMENPALSTKDRAVVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISS 118
Query: 62 NFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGEN--ILLTTKVDPSIIGG 119
FSI+ AH G + V TA+PL+ + L+ L+ + G+ + L V P I GG
Sbjct: 119 QFSILNDAHNGLIRGSVTTAQPLDSKNFKRLEKALQQSSLVGQQKTLKLDNVVKPDIKGG 178
Query: 120 MIVSVGDKYVDMSVASKIKKYTDLLQ 145
+IV VGD+ +D+SV+SKI+K +L+
Sbjct: 179 LIVEVGDQTIDLSVSSKIQKLNKVLE 204
>sp|B9JTR5|ATPD_AGRVS ATP synthase subunit delta OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=atpH PE=3 SV=1
Length = 193
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 7 VKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSII 66
V + V P + A+ + K N L L+A N ++ + G+I F +I
Sbjct: 54 VDLQRLVTSPAFTSEQQASAIAALCDKAEIGGLVGNFLKLVAANRRLFAVPGMIAAFRMI 113
Query: 67 MAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGD 126
A HRG+L +V +A L A ++EL+ LK + G+ + + VDPS++GG+IV +G
Sbjct: 114 AARHRGELAADVTSAHALTPAQETELKEALK--SATGKTVTMFVTVDPSLLGGLIVKIGS 171
Query: 127 KYVDMSVASKI 137
+ +D S+ +K+
Sbjct: 172 RQIDTSLRTKL 182
>sp|Q9P602|ATPO_NEUCR ATP synthase subunit 5, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=atp-5 PE=3 SV=2
Length = 220
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 42 NLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTL--KLF 99
N LA LAEN ++ + V+ FS +M+A RG++ + V +A+PL+ + L+S + +
Sbjct: 112 NFLATLAENNRLGLLPSVVAKFSELMSAARGEVEMVVTSAQPLDNKTLNRLESAVAKSPY 171
Query: 100 AKKGENILLTTKVDPSIIGGMIVSVGDKYVDMSVASKIKKYTDLLQ 145
G+ + +T KV+ IIGG++V +G++ +D+SV+SKI K LL
Sbjct: 172 VGSGKKLKVTNKVNADIIGGLVVEIGERTIDLSVSSKIAKMNKLLS 217
>sp|Q2VZM9|ATPD_MAGSA ATP synthase subunit delta OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpH PE=3 SV=1
Length = 184
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 3 LKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 62
L+ R V P + ++ + +A+ V + FS + L L A+N ++ + GVI +
Sbjct: 41 LRESADLRRVVDSPVLSRNDQGKAISAVAKAAGFSELTNKFLGLAAQNRRLHTLSGVIAS 100
Query: 63 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIV 122
+ +AA RG+ V +A L A + L + LK A G N+ + KVDPS++GG++V
Sbjct: 101 YLGRLAARRGEKSATVASAVALSPAQQDALTTALK--AAFGGNVAVDVKVDPSLLGGLVV 158
Query: 123 SVGDKYVDMSVASKIK 138
VG + VD S+ +K++
Sbjct: 159 QVGSRMVDSSLKTKLQ 174
>sp|Q0C0Z7|ATPD_HYPNA ATP synthase subunit delta OS=Hyphomonas neptunium (strain ATCC
15444) GN=atpH PE=3 SV=1
Length = 181
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 3 LKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINN 62
+KT R + P + +K+ AL + +K +S L +A NG+ +I G
Sbjct: 39 IKTSADLRKLLDSPAFSRDVKVSALAEIAKKAGYSPLFGKFLGTMATNGRANDILGAEFA 98
Query: 63 FSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIV 122
F A RG V TA+ + A+KS ++S L G ++ LT++VDPS+IGG+ +
Sbjct: 99 FDQFYAKQRGVQRAIVRTAKEMTGAEKSRIESLLARVV--GGDVELTSEVDPSLIGGIQL 156
Query: 123 SVGDKYVDMSVASKIKKYTDLLQ 145
+G K VD SVA K+++ +++
Sbjct: 157 RLGSKLVDASVAKKLERMNTVMK 179
>sp|Q75EZ3|ATPO_ASHGO ATP synthase subunit 5, mitochondrial OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 6 DVKFRDFVLDPTIQKSLKIEALKIVGQKK-NFSAASINLLALLAENGKIKNIDGVINNFS 64
D K + +P + + ++ + QK AA NL+ +LAEN ++ + GV F+
Sbjct: 62 DAKLGAILANPALPAGDRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFT 121
Query: 65 IIMAAHRGDLPVEVITARPLE-----EADKSELQSTLKLFAKKGENILLTTKVDPSIIGG 119
+ AH G + V TA+PLE +K+ QS+ F G+ + L V P I GG
Sbjct: 122 KLTDAHNGLVQATVTTAQPLEGKLFRRVEKALAQSS---FIGAGKTLKLENVVKPEIQGG 178
Query: 120 MIVSVGDKYVDMSVASKIKKYTDLLQ 145
+IV V D+ VD+S+AS+I K +L+
Sbjct: 179 LIVEVADRTVDLSIASRISKLNQVLK 204
>sp|Q98EV5|ATPD_RHILO ATP synthase subunit delta OS=Rhizobium loti (strain MAFF303099)
GN=atpH PE=3 SV=1
Length = 186
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 42 NLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAK 101
N L ++A N ++ + G+I F I A HRG+ EV +A L A ++EL++ LK A
Sbjct: 82 NFLRVVARNRRLFAVPGMIKAFRQIAAEHRGETAAEVTSAHELTAAQQTELKAALKSVA- 140
Query: 102 KGENILLTTKVDPSIIGGMIVSVGDKYVDMSVASKI 137
G+++ ++ VDPS++GG++V +G + +D S+ +K+
Sbjct: 141 -GKDVAISVTVDPSLLGGLVVKIGSRQIDTSLKTKL 175
>sp|Q92LK5|ATPD_RHIME ATP synthase subunit delta OS=Rhizobium meliloti (strain 1021)
GN=atpH PE=3 SV=2
Length = 188
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ ++ P + +A+ + +K FS N L ++A N ++ + G+I F ++ A
Sbjct: 51 LKRLIVSPVFSADDQFKAISALVEKFGFSGLVGNFLKVVARNRRLFVLPGIIKAFRLLAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
H+G++ +V +A L A + EL++ LK G+++ + VDPSI+GG+IV VG +
Sbjct: 111 RHKGEITADVTSAHALTLAQEIELKAALK--GVTGKDVAVNVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|C4LDW3|ATPD_TOLAT ATP synthase subunit delta OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=atpH PE=3 SV=1
Length = 177
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 10 RDFVLDPTIQKSLKIEAL-----KIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFS 64
+D + I S+ E L +I G++ N NL+ ++AENG++ + V+ FS
Sbjct: 40 KDDTVQQVIHSSMAPEQLAQLFNQICGEQLNEQGQ--NLIRVMAENGRLSVLPAVVAEFS 97
Query: 65 IIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSV 124
+ A +L ++ +A L EA+K ++Q +L+ A+ + L ++DPS++ G+++ +
Sbjct: 98 ALKAELDKELEAQITSAAALSEAEKVKIQKSLE--ARYQRTVRLNCQLDPSLMAGLVIKI 155
Query: 125 GDKYVDMSVASKIKKYTDLLQT 146
GD +D SV SK+ + + LQ+
Sbjct: 156 GDDIIDASVRSKLNRLAEALQS 177
>sp|P05438|ATPD_RHORU ATP synthase subunit delta OS=Rhodospirillum rubrum GN=atpH PE=3
SV=2
Length = 186
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P I + + +AL + +K F N L ++A + + G+I F +A
Sbjct: 49 LRRVIASPVIGRDDQRKALTALAEKAGFHEIVRNFLGVVAAKHRSFAVPGMIGAFLERLA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
A RG++ +++A L A KS L T L G + + VDP+++GGM+V VG +
Sbjct: 109 ARRGEVTARIVSATALTSAQKSAL--TTALNKATGNTVTIDASVDPALLGGMVVRVGSRM 166
Query: 129 VDMSVASKIKK 139
VD S+++K+K+
Sbjct: 167 VDSSLSTKLKR 177
>sp|Q2RV21|ATPD_RHORT ATP synthase subunit delta OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=atpH PE=3 SV=1
Length = 186
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P I + + +AL + +K F N L ++A + + G+I F +A
Sbjct: 49 LRRVIASPVIGRDDQRKALTALAEKAGFHEIVRNFLGVVAAKHRSFAVPGMIGAFLERLA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
A RG++ +++A L A KS L T L G + + VDP+++GGM+V VG +
Sbjct: 109 ARRGEVTARIVSATALTSAQKSAL--TTALNKATGNTVTIDASVDPALLGGMVVRVGSRM 166
Query: 129 VDMSVASKIKK 139
VD S+++K+K+
Sbjct: 167 VDSSLSTKLKR 177
>sp|A6UDM4|ATPD_SINMW ATP synthase subunit delta OS=Sinorhizobium medicae (strain WSM419)
GN=atpH PE=3 SV=1
Length = 188
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ ++ P + +A+ + +K S N L ++A N ++ + G+I F ++ A
Sbjct: 51 LKRLIVSPVFSADDQYKAISALVEKFGVSGLVGNFLKVVARNRRLFVLPGIIRAFRLLAA 110
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
H+G++ +V +A L A ++EL++ LK G+++ + VDPSI+GG+IV VG +
Sbjct: 111 RHKGEITADVTSAHALTPAQETELKAALK--GVTGKDVAVNVTVDPSILGGLIVKVGSRQ 168
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 169 IDTSLRTKL 177
>sp|Q2N8Z6|ATPD_ERYLH ATP synthase subunit delta OS=Erythrobacter litoralis (strain
HTCC2594) GN=atpH PE=3 SV=2
Length = 184
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 15 DPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMAAHRGDL 74
+P I + + A++ V S + L LA N ++ + +I F I AA RG++
Sbjct: 55 NPEISRKDQASAIEGVAGVLGLSPLTTKFLGTLAANRRLSKLGDMIRAFRTIAAAQRGEV 114
Query: 75 PVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKYVDMSVA 134
+V++A PL++ L++ KL A++G + L+ VDP ++GG++V++G K +D S+
Sbjct: 115 TADVVSAHPLKDDQLESLKT--KLTAREGRTVKLSPTVDPDLLGGLVVTIGSKRIDGSIR 172
Query: 135 SKIKKYTDLLQ 145
+++ + ++
Sbjct: 173 TRLNTLANAMK 183
>sp|C1D5G5|ATPD_LARHH ATP synthase subunit delta OS=Laribacter hongkongensis (strain
HLHK9) GN=atpH PE=3 SV=1
Length = 178
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 42 NLLALLAENGKIKNIDGVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAK 101
NLL LAEN ++ + + F + G L ++ +A PL EA +EL +TLK AK
Sbjct: 76 NLLEALAENHRLALLPAIAEQFEQLKQVEEGVLTADIASAYPLTEAQSAELAATLK--AK 133
Query: 102 KGENILLTTKVDPSIIGGMIVSVGDKYVDMSVASKI 137
G+ I+L VDPS+IGG+ + VGD+ +D SV K+
Sbjct: 134 YGKEIVLKASVDPSLIGGVRILVGDEVIDASVRGKL 169
>sp|B9L1H2|ATPD_THERP ATP synthase subunit delta OS=Thermomicrobium roseum (strain ATCC
27502 / DSM 5159 / P-2) GN=atpH PE=3 SV=1
Length = 180
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIV--GQKKNFSAASINLLALLAENGKIKNIDG 58
+AL D +F+ +P I K++ + + G + + NLL LL E G+ +
Sbjct: 35 EALARDSAVEEFIQNPAIPLEAKVQVIDRLFPGDENRYVR---NLLVLLLERGRWHQLRD 91
Query: 59 VINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIG 118
V+ F ++ HRG + VE++TA PLE ++ L+ +L + + L T VDP ++G
Sbjct: 92 VVVAFRELLREHRGVIDVELVTAVPLEPSEVERLRR--ELAQRLSRPVELRTTVDPELLG 149
Query: 119 GMIVSVGDKYVDMSVASKI 137
G+++ +GD+ D SV +++
Sbjct: 150 GVVLKIGDEVFDASVRTQL 168
>sp|P09457|ATPO_YEAST ATP synthase subunit 5, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATP5 PE=1 SV=1
Length = 212
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 3 LKTDVKFRDFVLDPTIQKSLK-----IEALKIVGQKKNFSAASINLLALLAENGKIKNID 57
+K + K +L+P + SLK I+A IV KN +NLL +L+EN ++ +
Sbjct: 64 VKKNPKLGHLLLNPAL--SLKDRNSVIDA--IVETHKNLDGYVVNLLKVLSENNRLGCFE 119
Query: 58 GVINNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKL--FAKKGENILLTTKVDPS 115
+ ++F ++ AH G L V +A PL+ ++ L +G+++ L V P
Sbjct: 120 KIASDFGVLNDAHNGLLKGTVTSAEPLDPKSFKRIEKALSASKLVGQGKSLKLENVVKPE 179
Query: 116 IIGGMIVSVGDKYVDMSVASKIKKYTDLLQ 145
I GG+IV +GDK VD+S+++KI+K +L+
Sbjct: 180 IKGGLIVELGDKTVDLSISTKIQKLNKVLE 209
>sp|Q9A2V6|ATPD_CAUCR ATP synthase subunit delta OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=atpH PE=3 SV=1
Length = 184
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P K + L V +K F + L L+A NG+ ++ G I+ F + A
Sbjct: 48 LRRLIASPAFSAEDKGKGLTAVAKKAGFQPLTTKFLGLVAANGRTGDLLGAISAFVELSA 107
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG + EV++A L A +Q+ L G+ ++T+VDPS++GG+ V VG +
Sbjct: 108 KHRGVVTAEVVSAAALSPAQLKGVQTALA--QALGKTPEVSTRVDPSLLGGLKVRVGSRL 165
Query: 129 VDMSVASKI 137
D S+ SK+
Sbjct: 166 FDASLRSKL 174
>sp|B8H5I3|ATPD_CAUCN ATP synthase subunit delta OS=Caulobacter crescentus (strain NA1000
/ CB15N) GN=atpH PE=3 SV=2
Length = 184
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
R + P K + L V +K F + L L+A NG+ ++ G I+ F + A
Sbjct: 48 LRRLIASPAFSAEDKGKGLTAVAKKAGFQPLTTKFLGLVAANGRTGDLLGAISAFVELSA 107
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
HRG + EV++A L A +Q+ L G+ ++T+VDPS++GG+ V VG +
Sbjct: 108 KHRGVVTAEVVSAAALSPAQLKGVQTALA--QALGKTPEVSTRVDPSLLGGLKVRVGSRL 165
Query: 129 VDMSVASKI 137
D S+ SK+
Sbjct: 166 FDASLRSKL 174
>sp|B6IPC9|ATPD_RHOCS ATP synthase subunit delta OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=atpH PE=3 SV=1
Length = 186
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 1 QALKTDVKFRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVI 60
Q + R V P + +S + A+ V + + S + L+A N ++ + G+I
Sbjct: 41 QLMAESADLRRVVRSPLLSRSDQARAMDAVLAQVDVSGLVRQFVGLVARNRRLFALSGMI 100
Query: 61 NNFSIIMAAHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGM 120
+ F +A RG+ V+ ARPL + L L+ G + + +VDPS+IGGM
Sbjct: 101 DGFLAELARRRGEQTARVVAARPLSQEQLDALTDALR--RALGSKVSVDLRVDPSLIGGM 158
Query: 121 IVSVGDKYVDMSVASKIKK 139
+V VG + +D SV +K+ K
Sbjct: 159 VVKVGSRMIDSSVRTKLTK 177
>sp|A5E947|ATPD_BRASB ATP synthase subunit delta OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=atpH PE=3 SV=1
Length = 186
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 9 FRDFVLDPTIQKSLKIEALKIVGQKKNFSAASINLLALLAENGKIKNIDGVINNFSIIMA 68
+ V P ++++AL V K + + N+L +L N ++ + VI F+ ++A
Sbjct: 49 LKRLVRSPVFGADVQLKALNAVLDKAGIAGVAANVLRVLTANRRLFAVADVIRAFNALVA 108
Query: 69 AHRGDLPVEVITARPLEEADKSELQSTLKLFAKKGENILLTTKVDPSIIGGMIVSVGDKY 128
++G+ +V A PL + + L+++LK G+++ L KVDP+IIGG++V +G +
Sbjct: 109 KYKGEATADVTVAEPLSDKNLDALKASLKTVT--GKDVALNVKVDPAIIGGLVVKLGSRM 166
Query: 129 VDMSVASKI 137
+D S+ +K+
Sbjct: 167 IDSSLRTKL 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,033,454
Number of Sequences: 539616
Number of extensions: 1750735
Number of successful extensions: 6986
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 6039
Number of HSP's gapped (non-prelim): 758
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)