Query psy9754
Match_columns 306
No_of_seqs 150 out of 1667
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 18:43:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.1E-52 3.7E-57 351.5 30.6 280 3-301 21-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 6.6E-52 2.3E-56 345.9 32.1 279 5-303 14-300 (302)
3 2vpj_A Kelch-like protein 12; 100.0 4E-51 1.4E-55 341.0 32.2 276 5-303 13-301 (301)
4 3ii7_A Kelch-like protein 7; p 100.0 4.8E-51 1.7E-55 341.3 27.9 275 6-303 11-295 (306)
5 4asc_A Kelch repeat and BTB do 100.0 8.4E-49 2.9E-53 329.0 28.3 275 5-302 3-297 (315)
6 2woz_A Kelch repeat and BTB do 100.0 4.5E-48 1.5E-52 325.0 28.5 275 5-302 14-307 (318)
7 1zgk_A Kelch-like ECH-associat 100.0 1.1E-43 3.7E-48 296.9 28.4 242 37-302 11-262 (308)
8 2xn4_A Kelch-like protein 2; s 100.0 1.4E-43 4.8E-48 295.5 28.4 242 39-302 7-251 (302)
9 3ii7_A Kelch-like protein 7; p 100.0 4.3E-43 1.5E-47 293.1 28.7 242 39-302 5-247 (306)
10 2uvk_A YJHT; unknown function, 100.0 1.3E-43 4.4E-48 302.5 25.4 273 3-285 16-348 (357)
11 2vpj_A Kelch-like protein 12; 100.0 3E-42 1E-46 287.3 29.4 234 47-302 17-253 (301)
12 4asc_A Kelch repeat and BTB do 100.0 3.5E-42 1.2E-46 288.7 23.2 248 3-261 42-306 (315)
13 2woz_A Kelch repeat and BTB do 100.0 1.5E-41 5.1E-46 285.3 23.2 245 3-259 53-314 (318)
14 2uvk_A YJHT; unknown function, 100.0 1.9E-41 6.4E-46 289.2 23.9 249 33-302 2-316 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 2.5E-37 8.6E-42 283.6 24.9 258 5-279 396-694 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 6.5E-37 2.2E-41 280.9 27.3 252 30-303 378-665 (695)
17 1k3i_A Galactose oxidase precu 100.0 2.5E-37 8.6E-42 283.2 22.5 281 6-301 197-518 (656)
18 1k3i_A Galactose oxidase precu 100.0 1.5E-32 5E-37 251.7 21.1 263 4-278 251-548 (656)
19 3dsm_A Uncharacterized protein 98.6 0.00022 7.5E-09 59.2 27.6 187 66-283 63-257 (328)
20 3mbr_X Glutamine cyclotransfer 98.3 0.0001 3.4E-09 58.0 18.6 156 91-282 23-182 (243)
21 3mbr_X Glutamine cyclotransfer 98.3 0.00039 1.3E-08 54.7 21.8 176 47-262 33-225 (243)
22 3dsm_A Uncharacterized protein 98.3 0.00037 1.3E-08 57.9 23.0 187 66-278 104-301 (328)
23 3vgz_A Uncharacterized protein 98.2 0.0014 4.8E-08 54.4 26.1 181 67-284 111-308 (353)
24 3nol_A Glutamine cyclotransfer 98.2 0.00046 1.6E-08 54.7 20.2 167 66-262 64-246 (262)
25 1l0q_A Surface layer protein; 98.2 0.00029 9.8E-09 59.7 20.6 178 66-282 53-236 (391)
26 2iwa_A Glutamine cyclotransfer 98.2 0.0011 3.7E-08 53.1 22.2 187 47-280 34-238 (266)
27 3nol_A Glutamine cyclotransfer 98.1 0.00014 4.6E-09 57.8 14.4 155 92-282 46-204 (262)
28 1l0q_A Surface layer protein; 98.1 0.00054 1.8E-08 58.0 18.8 177 67-282 96-278 (391)
29 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0054 1.8E-07 51.6 26.6 172 67-284 153-344 (376)
30 3ow8_A WD repeat-containing pr 97.9 0.0035 1.2E-07 51.7 20.5 177 67-282 102-282 (321)
31 3nok_A Glutaminyl cyclase; bet 97.9 0.0033 1.1E-07 49.9 18.5 136 68-234 76-214 (268)
32 3bws_A Protein LP49; two-domai 97.9 0.0041 1.4E-07 53.2 20.8 184 67-282 144-337 (433)
33 4ery_A WD repeat-containing pr 97.8 0.0063 2.2E-07 49.6 21.0 178 67-281 87-270 (312)
34 3nok_A Glutaminyl cyclase; bet 97.8 0.0015 5.2E-08 51.8 15.7 152 92-282 58-213 (268)
35 1k8k_C P40, ARP2/3 complex 41 97.8 0.0045 1.5E-07 51.6 19.8 180 67-284 74-281 (372)
36 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.012 4.2E-07 49.4 26.2 155 67-259 198-366 (376)
37 2iwa_A Glutamine cyclotransfer 97.8 0.0042 1.4E-07 49.7 17.9 155 92-282 24-184 (266)
38 3jrp_A Fusion protein of prote 97.7 0.0051 1.8E-07 51.3 19.1 184 67-284 79-293 (379)
39 1ri6_A Putative isomerase YBHE 97.7 0.015 5.1E-07 47.7 22.2 184 68-284 61-269 (343)
40 2hqs_A Protein TOLB; TOLB, PAL 97.7 0.021 7.2E-07 48.9 23.8 185 67-284 203-392 (415)
41 1gxr_A ESG1, transducin-like e 97.7 0.0096 3.3E-07 48.7 19.4 178 67-283 119-300 (337)
42 1rwi_B Serine/threonine-protei 97.6 0.0087 3E-07 47.5 18.2 177 67-281 87-266 (270)
43 1rwi_B Serine/threonine-protei 97.5 0.0063 2.2E-07 48.3 16.4 175 67-281 46-224 (270)
44 4aez_A CDC20, WD repeat-contai 97.5 0.013 4.5E-07 49.7 19.0 150 98-282 228-383 (401)
45 3u4y_A Uncharacterized protein 97.5 0.027 9.1E-07 46.1 21.5 181 67-282 62-255 (331)
46 1ri6_A Putative isomerase YBHE 97.5 0.021 7.1E-07 46.8 19.6 171 99-303 141-333 (343)
47 2z2n_A Virginiamycin B lyase; 97.5 0.024 8.3E-07 45.5 21.5 178 67-284 36-217 (299)
48 3vl1_A 26S proteasome regulato 97.5 0.024 8.1E-07 48.1 20.4 179 67-281 119-324 (420)
49 1p22_A F-BOX/WD-repeat protein 97.5 0.0053 1.8E-07 52.8 16.1 174 67-281 193-367 (435)
50 3scy_A Hypothetical bacterial 97.5 0.021 7.1E-07 47.6 19.1 113 47-174 15-130 (361)
51 3hfq_A Uncharacterized protein 97.5 0.015 5.2E-07 48.1 18.1 185 67-282 18-223 (347)
52 2qc5_A Streptogramin B lactona 97.5 0.029 9.8E-07 45.0 21.3 177 67-284 41-222 (300)
53 1nir_A Nitrite reductase; hemo 97.4 0.011 3.7E-07 52.7 17.8 178 67-279 200-402 (543)
54 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.033 1.1E-06 45.2 19.8 183 67-282 92-302 (314)
55 3bws_A Protein LP49; two-domai 97.4 0.009 3.1E-07 51.1 16.8 186 67-282 101-295 (433)
56 1q7f_A NHL, brain tumor CG1071 97.4 0.032 1.1E-06 44.7 20.7 178 67-279 100-280 (286)
57 1q7f_A NHL, brain tumor CG1071 97.4 0.032 1.1E-06 44.7 22.0 181 67-280 51-239 (286)
58 1gxr_A ESG1, transducin-like e 97.4 0.033 1.1E-06 45.4 19.5 170 67-277 163-335 (337)
59 2z2n_A Virginiamycin B lyase; 97.4 0.033 1.1E-06 44.7 25.7 172 67-278 78-254 (299)
60 3jrp_A Fusion protein of prote 97.4 0.015 5.1E-07 48.4 17.3 181 67-280 33-241 (379)
61 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.018 6.1E-07 49.6 18.2 173 67-282 179-351 (445)
62 3hfq_A Uncharacterized protein 97.4 0.043 1.5E-06 45.3 19.8 180 66-278 62-270 (347)
63 3vgz_A Uncharacterized protein 97.3 0.044 1.5E-06 45.1 19.6 182 66-284 68-267 (353)
64 3v7d_B Cell division control p 97.3 0.039 1.3E-06 47.6 19.7 93 164-280 290-382 (464)
65 1got_B GT-beta; complex (GTP-b 97.3 0.039 1.3E-06 45.6 18.7 165 67-262 164-333 (340)
66 2qc5_A Streptogramin B lactona 97.3 0.045 1.5E-06 43.8 24.4 177 67-284 83-264 (300)
67 3ow8_A WD repeat-containing pr 97.3 0.05 1.7E-06 44.7 19.1 171 67-277 144-319 (321)
68 3vl1_A 26S proteasome regulato 97.3 0.066 2.3E-06 45.3 22.1 105 145-279 258-365 (420)
69 3scy_A Hypothetical bacterial 97.3 0.06 2.1E-06 44.7 21.2 53 67-124 77-130 (361)
70 3no2_A Uncharacterized protein 97.3 0.039 1.3E-06 44.3 17.8 178 66-284 14-202 (276)
71 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.062 2.1E-06 46.1 20.2 176 67-283 219-395 (445)
72 4ery_A WD repeat-containing pr 97.2 0.058 2E-06 43.7 19.4 177 67-281 45-225 (312)
73 3dwl_C Actin-related protein 2 97.2 0.011 3.7E-07 49.5 14.7 231 6-284 22-286 (377)
74 1r5m_A SIR4-interacting protei 97.2 0.035 1.2E-06 46.8 17.9 146 97-281 215-363 (425)
75 3odt_A Protein DOA1; ubiquitin 97.2 0.055 1.9E-06 43.6 18.3 147 98-284 154-301 (313)
76 3u4y_A Uncharacterized protein 97.2 0.031 1E-06 45.7 16.8 179 66-282 19-210 (331)
77 3mkq_A Coatomer beta'-subunit; 97.2 0.029 1E-06 52.2 18.2 177 67-281 77-261 (814)
78 1k8k_C P40, ARP2/3 complex 41 97.2 0.027 9.4E-07 46.7 16.4 183 67-282 30-236 (372)
79 3jro_A Fusion protein of prote 97.1 0.04 1.4E-06 51.1 18.8 184 67-284 77-291 (753)
80 1p22_A F-BOX/WD-repeat protein 97.1 0.015 5E-07 50.0 14.9 176 67-282 153-328 (435)
81 3v9f_A Two-component system se 97.1 0.057 2E-06 50.3 19.7 177 67-284 427-616 (781)
82 4aez_A CDC20, WD repeat-contai 97.1 0.04 1.4E-06 46.7 16.9 180 66-282 112-296 (401)
83 4g56_B MGC81050 protein; prote 97.0 0.016 5.6E-07 48.4 13.8 150 98-284 150-306 (357)
84 1got_B GT-beta; complex (GTP-b 97.0 0.11 3.6E-06 42.9 21.7 147 98-281 154-303 (340)
85 2ynn_A Coatomer subunit beta'; 97.0 0.097 3.3E-06 42.4 19.8 177 67-282 77-262 (304)
86 3fvz_A Peptidyl-glycine alpha- 97.0 0.11 3.6E-06 42.8 24.8 192 67-284 69-282 (329)
87 3g4e_A Regucalcin; six bladed 97.0 0.069 2.4E-06 43.2 17.0 185 66-284 34-234 (297)
88 1qks_A Cytochrome CD1 nitrite 97.0 0.11 3.8E-06 46.4 19.5 224 6-279 166-421 (567)
89 1r5m_A SIR4-interacting protei 97.0 0.027 9.3E-07 47.6 15.1 134 67-232 227-363 (425)
90 3zwl_B Eukaryotic translation 97.0 0.12 4E-06 42.6 19.2 158 98-282 186-349 (369)
91 2aq5_A Coronin-1A; WD40 repeat 97.0 0.071 2.4E-06 45.1 17.4 185 67-281 104-301 (402)
92 3dwl_C Actin-related protein 2 97.0 0.007 2.4E-07 50.7 10.9 182 67-282 33-239 (377)
93 4a2l_A BT_4663, two-component 96.9 0.13 4.5E-06 47.9 20.0 175 67-284 427-619 (795)
94 3zwl_B Eukaryotic translation 96.9 0.068 2.3E-06 44.1 16.5 183 67-282 54-252 (369)
95 2ojh_A Uncharacterized protein 96.9 0.12 4E-06 41.0 19.0 192 67-284 62-263 (297)
96 1vyh_C Platelet-activating fac 96.9 0.17 5.9E-06 43.0 18.9 52 221-281 318-371 (410)
97 3fvz_A Peptidyl-glycine alpha- 96.8 0.15 5.1E-06 41.9 25.2 156 98-279 154-322 (329)
98 3bg1_A Protein SEC13 homolog; 96.8 0.093 3.2E-06 42.8 16.6 32 252-291 273-305 (316)
99 3ei3_B DNA damage-binding prot 96.8 0.17 5.7E-06 42.3 18.6 177 67-281 96-284 (383)
100 4a2l_A BT_4663, two-component 96.8 0.32 1.1E-05 45.3 24.2 178 67-284 107-296 (795)
101 2vdu_B TRNA (guanine-N(7)-)-me 96.8 0.2 7E-06 43.0 23.6 190 67-283 171-397 (450)
102 2dg1_A DRP35, lactonase; beta 96.8 0.058 2E-06 44.2 15.3 155 98-278 55-212 (333)
103 2pbi_B Guanine nucleotide-bind 96.7 0.16 5.4E-06 42.2 17.5 179 67-281 86-273 (354)
104 2dg1_A DRP35, lactonase; beta 96.7 0.17 6E-06 41.3 17.6 187 67-280 66-264 (333)
105 2pm7_B Protein transport prote 96.7 0.17 5.6E-06 40.8 19.5 26 252-284 265-291 (297)
106 1nir_A Nitrite reductase; hemo 96.7 0.11 3.7E-06 46.2 17.2 180 66-284 158-360 (543)
107 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.046 1.6E-06 45.3 14.1 153 98-284 27-186 (345)
108 1vyh_C Platelet-activating fac 96.7 0.1 3.5E-06 44.4 16.2 136 67-233 130-268 (410)
109 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.042 1.4E-06 45.6 13.5 177 67-277 38-223 (345)
110 1pgu_A Actin interacting prote 96.7 0.32 1.1E-05 43.3 21.0 147 101-281 175-330 (615)
111 4gqb_B Methylosome protein 50; 96.6 0.047 1.6E-06 45.4 13.0 179 67-282 103-292 (344)
112 2pm9_A Protein WEB1, protein t 96.6 0.15 5.1E-06 43.0 16.5 149 99-281 178-339 (416)
113 1pby_B Quinohemoprotein amine 96.5 0.2 6.7E-06 40.7 16.4 93 165-282 220-313 (337)
114 1jmx_B Amine dehydrogenase; ox 96.5 0.23 7.9E-06 40.6 16.6 52 221-282 275-328 (349)
115 3e5z_A Putative gluconolactona 96.4 0.26 8.9E-06 39.5 17.2 183 66-283 49-250 (296)
116 1yfq_A Cell cycle arrest prote 96.4 0.29 1E-05 39.8 17.9 181 67-283 79-286 (342)
117 4aow_A Guanine nucleotide-bind 96.4 0.29 1E-05 39.7 17.8 94 164-281 195-288 (340)
118 4gga_A P55CDC, cell division c 96.4 0.38 1.3E-05 40.9 18.2 92 164-279 301-395 (420)
119 3g4e_A Regucalcin; six bladed 96.4 0.29 1E-05 39.4 18.1 171 67-262 73-263 (297)
120 2pbi_B Guanine nucleotide-bind 96.4 0.27 9.2E-06 40.8 16.6 134 99-262 210-347 (354)
121 3v7d_B Cell division control p 96.4 0.35 1.2E-05 41.5 17.9 173 67-277 290-463 (464)
122 4g56_B MGC81050 protein; prote 96.4 0.071 2.4E-06 44.4 12.9 174 67-279 161-343 (357)
123 4e54_B DNA damage-binding prot 96.3 0.15 5.2E-06 43.6 15.3 177 67-280 142-328 (435)
124 3mkq_A Coatomer beta'-subunit; 96.3 0.16 5.4E-06 47.2 16.2 177 67-281 35-219 (814)
125 3jro_A Fusion protein of prote 96.3 0.19 6.6E-06 46.5 16.7 181 67-280 31-239 (753)
126 1erj_A Transcriptional repress 96.3 0.25 8.4E-06 41.7 16.1 179 67-281 145-343 (393)
127 2ynn_A Coatomer subunit beta'; 96.3 0.23 7.8E-06 40.1 15.4 176 67-281 35-219 (304)
128 1pjx_A Dfpase, DIISOPROPYLFLUO 96.3 0.34 1.2E-05 39.0 19.2 186 66-282 45-259 (314)
129 2hes_X YDR267CP; beta-propelle 96.2 0.34 1.2E-05 39.7 16.4 148 98-279 164-328 (330)
130 3v9f_A Two-component system se 96.2 0.5 1.7E-05 43.9 19.1 149 98-285 373-530 (781)
131 3i2n_A WD repeat-containing pr 96.2 0.17 5.8E-06 41.5 14.5 181 66-281 43-245 (357)
132 4a11_B DNA excision repair pro 96.2 0.14 4.8E-06 42.8 14.2 52 221-281 314-367 (408)
133 3k26_A Polycomb protein EED; W 96.2 0.24 8.1E-06 40.7 15.3 95 67-175 95-194 (366)
134 4aow_A Guanine nucleotide-bind 96.2 0.39 1.3E-05 39.0 18.8 144 100-281 186-339 (340)
135 3f3f_A Nucleoporin SEH1; struc 96.2 0.39 1.3E-05 38.8 19.0 26 252-284 317-343 (351)
136 2xbg_A YCF48-like protein; pho 96.2 0.43 1.5E-05 39.2 19.2 154 75-259 23-180 (327)
137 1sq9_A Antiviral protein SKI8; 96.2 0.22 7.5E-06 41.6 15.1 151 100-281 82-269 (397)
138 3k26_A Polycomb protein EED; W 96.1 0.15 5.2E-06 41.9 13.9 62 198-279 299-366 (366)
139 2hqs_A Protein TOLB; TOLB, PAL 96.1 0.53 1.8E-05 40.0 19.1 189 66-285 158-350 (415)
140 3c5m_A Oligogalacturonate lyas 96.1 0.24 8.1E-06 41.4 15.1 203 66-284 167-389 (396)
141 3odt_A Protein DOA1; ubiquitin 96.1 0.4 1.4E-05 38.3 20.0 104 145-283 154-259 (313)
142 1npe_A Nidogen, entactin; glyc 96.1 0.38 1.3E-05 38.0 22.3 181 66-284 57-243 (267)
143 1sq9_A Antiviral protein SKI8; 96.1 0.51 1.7E-05 39.3 18.8 111 98-232 197-324 (397)
144 2z3z_A Dipeptidyl aminopeptida 96.0 0.85 2.9E-05 41.6 20.5 193 66-281 234-437 (706)
145 4gga_A P55CDC, cell division c 96.0 0.57 2E-05 39.7 17.3 94 67-175 125-220 (420)
146 2p4o_A Hypothetical protein; p 96.0 0.47 1.6E-05 38.4 20.0 163 68-261 96-278 (306)
147 4gqb_B Methylosome protein 50; 96.0 0.19 6.6E-06 41.6 13.8 150 97-281 91-248 (344)
148 2ojh_A Uncharacterized protein 96.0 0.42 1.4E-05 37.6 16.5 186 65-284 20-211 (297)
149 3dm0_A Maltose-binding peripla 96.0 0.76 2.6E-05 41.9 18.8 177 67-282 452-635 (694)
150 4e54_B DNA damage-binding prot 95.9 0.16 5.6E-06 43.4 13.1 149 98-282 131-285 (435)
151 1pgu_A Actin interacting prote 95.9 0.83 2.9E-05 40.6 18.3 144 99-279 456-614 (615)
152 3lrv_A PRE-mRNA-splicing facto 95.9 0.6 2E-05 38.3 18.4 106 145-281 138-246 (343)
153 2fp8_A Strictosidine synthase; 95.8 0.51 1.7E-05 38.5 15.5 188 68-280 102-314 (322)
154 3i2n_A WD repeat-containing pr 95.8 0.62 2.1E-05 38.0 17.4 93 67-174 139-244 (357)
155 2pm7_B Protein transport prote 95.8 0.59 2E-05 37.5 16.1 63 99-174 67-133 (297)
156 3azo_A Aminopeptidase; POP fam 95.8 0.62 2.1E-05 42.1 17.1 192 66-284 160-374 (662)
157 2ad6_A Methanol dehydrogenase 95.7 1.1 3.7E-05 40.1 21.4 104 67-179 73-193 (571)
158 3ei3_B DNA damage-binding prot 95.7 0.44 1.5E-05 39.7 15.0 145 100-279 87-236 (383)
159 3mmy_A MRNA export factor; mRN 95.7 0.68 2.3E-05 37.8 21.7 177 67-282 108-307 (368)
160 3no2_A Uncharacterized protein 95.7 0.62 2.1E-05 37.2 22.4 160 67-259 56-230 (276)
161 3sfz_A APAF-1, apoptotic pepti 95.7 0.52 1.8E-05 46.2 17.3 178 67-281 679-873 (1249)
162 3ott_A Two-component system se 95.7 1 3.4E-05 41.7 18.4 140 67-239 82-229 (758)
163 1kb0_A Quinohemoprotein alcoho 95.6 1.2 4.1E-05 40.7 18.2 121 92-236 71-207 (677)
164 2aq5_A Coronin-1A; WD40 repeat 95.6 0.9 3.1E-05 38.1 19.3 151 98-281 93-256 (402)
165 2ad6_A Methanol dehydrogenase 95.5 1.3 4.5E-05 39.5 18.3 121 92-235 56-192 (571)
166 2pm9_A Protein WEB1, protein t 95.4 0.52 1.8E-05 39.6 14.6 183 66-280 44-250 (416)
167 3lrv_A PRE-mRNA-splicing facto 95.4 0.62 2.1E-05 38.2 14.7 98 164-283 104-205 (343)
168 2vdu_B TRNA (guanine-N(7)-)-me 95.4 1.1 3.9E-05 38.3 16.8 108 98-234 160-275 (450)
169 1nr0_A Actin interacting prote 95.4 1.5 5E-05 39.4 18.4 149 98-282 201-358 (611)
170 3e5z_A Putative gluconolactona 95.4 0.81 2.8E-05 36.5 19.7 176 67-283 90-290 (296)
171 1yiq_A Quinohemoprotein alcoho 95.4 1.6 5.6E-05 39.9 20.8 121 92-236 64-200 (689)
172 3dm0_A Maltose-binding peripla 95.4 1.5 5E-05 40.0 18.2 148 98-282 441-595 (694)
173 1erj_A Transcriptional repress 95.3 0.7 2.4E-05 38.8 14.9 146 98-280 134-288 (393)
174 3ott_A Two-component system se 95.3 0.77 2.6E-05 42.5 16.3 130 98-262 482-617 (758)
175 2z3z_A Dipeptidyl aminopeptida 95.3 1.7 5.7E-05 39.6 19.2 152 113-284 234-396 (706)
176 2xyi_A Probable histone-bindin 95.3 0.87 3E-05 38.8 15.5 151 98-284 243-415 (430)
177 3pe7_A Oligogalacturonate lyas 95.2 0.75 2.6E-05 38.2 14.8 196 67-283 168-388 (388)
178 3iz6_a 40S ribosomal protein R 95.2 1.1 3.9E-05 37.3 18.0 179 67-280 180-376 (380)
179 3c7x_A Matrix metalloproteinas 95.2 0.59 2E-05 35.3 12.5 145 94-281 11-177 (196)
180 1jmx_B Amine dehydrogenase; ox 95.2 0.33 1.1E-05 39.6 12.4 117 144-282 9-137 (349)
181 1kv9_A Type II quinohemoprotei 95.1 2 6.7E-05 39.2 20.1 120 92-235 60-194 (668)
182 3sfz_A APAF-1, apoptotic pepti 95.0 0.23 8E-06 48.6 12.5 176 67-282 983-1161(1249)
183 3ju4_A Endo-N-acetylneuraminid 95.0 1.3 4.6E-05 37.1 18.4 128 75-207 268-407 (670)
184 1qhu_A Protein (hemopexin); be 95.0 1 3.6E-05 38.8 14.9 52 67-126 167-218 (460)
185 3hrp_A Uncharacterized protein 95.0 1.5 5E-05 37.3 16.1 182 67-284 152-359 (409)
186 4a11_B DNA excision repair pro 95.0 0.12 4E-06 43.3 9.1 145 98-280 55-219 (408)
187 1qks_A Cytochrome CD1 nitrite 95.0 1.5 5.2E-05 39.1 16.5 181 66-282 176-376 (567)
188 1kb0_A Quinohemoprotein alcoho 95.0 2.1 7.2E-05 39.1 22.3 105 66-179 86-207 (677)
189 1pby_B Quinohemoprotein amine 94.9 0.89 3.1E-05 36.7 14.0 145 66-234 10-167 (337)
190 2ghs_A AGR_C_1268P; regucalcin 94.8 1.3 4.5E-05 36.1 18.1 133 67-229 71-209 (326)
191 4ggc_A P55CDC, cell division c 94.8 1.2 4.2E-05 35.5 18.9 93 164-279 221-315 (318)
192 3bg1_A Protein SEC13 homolog; 94.8 0.47 1.6E-05 38.5 12.0 112 98-236 24-143 (316)
193 3azo_A Aminopeptidase; POP fam 94.8 1.9 6.6E-05 38.9 17.1 198 67-285 102-331 (662)
194 3gre_A Serine/threonine-protei 94.7 1.7 5.8E-05 36.8 17.1 150 98-282 181-362 (437)
195 1pex_A Collagenase-3, MMP-13; 94.6 1.1 3.9E-05 34.0 16.9 146 93-282 28-195 (207)
196 2xbg_A YCF48-like protein; pho 94.5 1.6 5.6E-05 35.7 25.8 177 69-285 58-241 (327)
197 1yiq_A Quinohemoprotein alcoho 94.4 2.9 0.0001 38.2 23.1 105 66-179 79-200 (689)
198 3b7f_A Glycosyl hydrolase, BNR 94.4 2 6.7E-05 36.2 18.9 190 68-291 32-274 (394)
199 1n7d_A LDL receptor, low-densi 94.4 1.2 4.3E-05 40.8 14.8 150 97-282 463-617 (699)
200 1ijq_A LDL receptor, low-densi 94.3 1.8 6E-05 35.3 21.9 166 66-260 51-226 (316)
201 2bkl_A Prolyl endopeptidase; m 94.3 3.1 0.0001 38.0 21.0 193 66-284 201-402 (695)
202 2xdw_A Prolyl endopeptidase; a 94.3 3.1 0.00011 38.1 25.2 191 66-281 207-416 (710)
203 3c5m_A Oligogalacturonate lyas 94.3 1 3.5E-05 37.4 13.3 154 114-284 168-334 (396)
204 1w6s_A Methanol dehydrogenase 94.3 2.4 8.4E-05 38.0 16.2 122 92-236 56-199 (599)
205 2p4o_A Hypothetical protein; p 94.3 1.7 5.9E-05 35.0 21.1 174 67-278 53-241 (306)
206 2bkl_A Prolyl endopeptidase; m 94.2 3.2 0.00011 37.9 22.2 190 67-280 147-352 (695)
207 3f3f_A Nucleoporin SEH1; struc 94.2 1.8 6.1E-05 34.8 16.9 63 198-280 182-250 (351)
208 3iz6_a 40S ribosomal protein R 94.2 2.1 7.3E-05 35.6 19.5 147 100-282 171-332 (380)
209 3gre_A Serine/threonine-protei 94.1 0.36 1.2E-05 41.1 10.2 109 145-281 181-294 (437)
210 3pe7_A Oligogalacturonate lyas 94.0 2.2 7.5E-05 35.3 16.4 199 67-284 60-278 (388)
211 2hes_X YDR267CP; beta-propelle 94.0 2 6.9E-05 34.9 15.9 150 101-284 26-189 (330)
212 3frx_A Guanine nucleotide-bind 94.0 2 6.8E-05 34.8 14.0 144 98-281 76-229 (319)
213 2ecf_A Dipeptidyl peptidase IV 93.9 2.6 8.8E-05 38.6 16.1 105 165-284 264-373 (741)
214 1yr2_A Prolyl oligopeptidase; 93.8 4 0.00014 37.6 20.0 193 66-284 242-446 (741)
215 2hz6_A Endoplasmic reticulum t 93.8 0.072 2.5E-06 44.8 5.0 94 67-178 19-118 (369)
216 1kv9_A Type II quinohemoprotei 93.6 4.2 0.00014 37.1 22.3 105 66-179 75-195 (668)
217 1yfq_A Cell cycle arrest prote 93.5 2.4 8.4E-05 34.2 15.5 61 98-173 67-131 (342)
218 1w6s_A Methanol dehydrogenase 92.7 5.4 0.00018 35.8 20.0 104 67-179 73-199 (599)
219 3v65_B Low-density lipoprotein 92.7 4 0.00014 34.3 21.4 164 66-260 137-306 (386)
220 1itv_A MMP9; adaptive molecula 92.5 2.6 8.8E-05 31.7 16.4 145 93-281 11-176 (195)
221 1npe_A Nidogen, entactin; glyc 92.5 3.1 0.00011 32.6 18.6 179 67-281 10-200 (267)
222 4ggc_A P55CDC, cell division c 92.5 3.3 0.00011 32.9 16.9 55 67-126 45-101 (318)
223 3hxj_A Pyrrolo-quinoline quino 92.3 1.2 4.1E-05 36.0 10.4 111 67-203 40-153 (330)
224 2xzm_R RACK1; ribosome, transl 92.3 3.9 0.00013 33.3 18.0 52 67-124 98-150 (343)
225 2fp8_A Strictosidine synthase; 92.3 3.8 0.00013 33.1 16.8 189 67-280 40-270 (322)
226 3oyo_A Hemopexin fold protein 92.2 3.2 0.00011 32.0 13.7 58 197-278 127-197 (225)
227 3v65_B Low-density lipoprotein 92.1 4.8 0.00016 33.8 19.0 174 67-279 96-277 (386)
228 3tc9_A Hypothetical hydrolase; 92.0 1.6 5.4E-05 37.4 11.0 144 98-278 149-300 (430)
229 3mmy_A MRNA export factor; mRN 92.0 4.2 0.00014 33.0 16.6 105 99-232 54-162 (368)
230 3frx_A Guanine nucleotide-bind 91.9 4.2 0.00014 32.8 19.2 134 67-232 87-229 (319)
231 3o4h_A Acylamino-acid-releasin 91.7 5.5 0.00019 35.3 14.6 139 67-234 90-231 (582)
232 1qhu_A Protein (hemopexin); be 91.7 6 0.00021 34.1 14.2 57 98-174 158-216 (460)
233 3iuj_A Prolyl endopeptidase; h 91.5 8.1 0.00028 35.2 18.3 190 66-284 207-410 (693)
234 4h5i_A Guanine nucleotide-exch 91.4 5.3 0.00018 33.0 15.6 154 98-282 144-303 (365)
235 3v64_C Agrin; beta propeller, 91.2 5.6 0.00019 32.8 22.4 165 66-262 94-265 (349)
236 2xdw_A Prolyl endopeptidase; a 91.0 9 0.00031 35.0 23.0 191 67-281 151-370 (710)
237 2cn3_A Xyloglucanase, beta-1,4 90.9 8.5 0.00029 35.5 15.3 133 122-285 554-693 (737)
238 1n7d_A LDL receptor, low-densi 90.8 4.4 0.00015 37.2 13.1 174 68-280 387-572 (699)
239 4h5i_A Guanine nucleotide-exch 90.0 7.2 0.00025 32.2 18.9 179 67-279 157-343 (365)
240 3dr2_A Exported gluconolactona 90.0 6.3 0.00022 31.5 12.7 159 99-279 57-224 (305)
241 1su3_A Interstitial collagenas 89.9 8.8 0.0003 33.0 13.9 147 93-282 267-435 (450)
242 3dr2_A Exported gluconolactona 89.9 6.4 0.00022 31.4 17.0 147 67-236 107-273 (305)
243 2xyi_A Probable histone-bindin 89.7 5.1 0.00018 33.9 12.1 63 197-279 243-309 (430)
244 2gop_A Trilobed protease; beta 89.7 7.1 0.00024 31.6 15.5 194 65-286 41-258 (347)
245 1k32_A Tricorn protease; prote 89.4 16 0.00054 35.2 18.8 146 114-284 317-466 (1045)
246 1flg_A Protein (quinoprotein e 89.3 12 0.00039 33.5 18.4 73 92-179 62-144 (582)
247 3lp9_A LS-24; SEED albumin, pl 89.2 4.2 0.00014 31.3 10.0 60 197-280 129-202 (227)
248 3ba0_A Macrophage metalloelast 89.1 9 0.00031 31.9 15.4 147 93-282 185-353 (365)
249 3v64_C Agrin; beta propeller, 88.7 9 0.00031 31.5 20.1 174 67-279 53-234 (349)
250 3hrp_A Uncharacterized protein 88.4 11 0.00036 31.9 24.0 175 68-277 195-408 (409)
251 3b7f_A Glycosyl hydrolase, BNR 88.4 10 0.00034 31.7 23.5 194 68-291 82-334 (394)
252 3o4h_A Acylamino-acid-releasin 88.3 13 0.00044 32.8 14.6 139 114-283 90-231 (582)
253 3sjl_D Methylamine dehydrogena 88.2 11 0.00037 31.8 22.3 114 6-127 44-173 (386)
254 3vu4_A KMHSV2; beta-propeller 88.0 9.9 0.00034 31.1 22.2 170 67-280 81-272 (355)
255 2ymu_A WD-40 repeat protein; u 87.7 14 0.00047 32.4 18.2 143 98-280 396-540 (577)
256 3oyo_A Hemopexin fold protein 87.5 8.3 0.00028 29.6 11.5 101 97-229 69-197 (225)
257 3hxj_A Pyrrolo-quinoline quino 87.4 9.8 0.00033 30.4 13.5 84 145-258 225-311 (330)
258 3iuj_A Prolyl endopeptidase; h 87.2 17 0.00059 33.0 19.8 191 67-284 155-364 (693)
259 2ecf_A Dipeptidyl peptidase IV 87.0 18 0.00061 33.0 17.3 105 67-179 263-374 (741)
260 2hz6_A Endoplasmic reticulum t 86.9 0.41 1.4E-05 40.1 3.2 65 142-234 6-74 (369)
261 2ymu_A WD-40 repeat protein; u 86.7 16 0.00053 32.0 16.8 139 98-276 437-577 (577)
262 3m0c_C LDL receptor, low-densi 86.5 21 0.00072 33.3 21.3 135 98-262 482-622 (791)
263 2ghs_A AGR_C_1268P; regucalcin 86.4 12 0.0004 30.3 21.7 165 68-262 110-293 (326)
264 3m0c_C LDL receptor, low-densi 85.8 23 0.00078 33.0 19.5 171 68-279 405-589 (791)
265 2xzm_R RACK1; ribosome, transl 85.7 13 0.00044 30.1 14.8 63 98-175 87-151 (343)
266 3a0f_A Xyloglucanase; beta-pro 85.4 23 0.00079 32.8 16.6 173 77-286 529-724 (763)
267 4hw6_A Hypothetical protein, I 85.2 15 0.0005 31.4 12.2 143 99-278 153-303 (433)
268 1hxn_A Hemopexin, HPX; heme, b 85.2 11 0.00037 28.8 11.7 57 97-172 27-89 (219)
269 1flg_A Protein (quinoprotein e 85.1 20 0.0007 31.9 20.7 102 68-178 79-200 (582)
270 1ijq_A LDL receptor, low-densi 85.1 14 0.00047 29.9 21.3 175 66-279 9-195 (316)
271 3c7x_A Matrix metalloproteinas 84.6 11 0.00037 28.3 11.6 104 97-232 60-177 (196)
272 3dw8_B Serine/threonine-protei 84.0 18 0.0006 30.3 17.6 26 252-284 353-378 (447)
273 1yr2_A Prolyl oligopeptidase; 83.6 27 0.00092 32.0 18.8 208 66-288 132-361 (741)
274 1pex_A Collagenase-3, MMP-13; 83.2 13 0.00044 28.1 13.6 102 98-232 79-194 (207)
275 3vu4_A KMHSV2; beta-propeller 83.0 18 0.00061 29.6 24.0 66 145-231 206-272 (355)
276 1jof_A Carboxy-CIS,CIS-muconat 83.0 18 0.00062 29.6 14.6 54 68-128 17-75 (365)
277 3p5b_L Low density lipoprotein 82.8 20 0.00069 30.1 21.7 132 98-260 170-308 (400)
278 2qe8_A Uncharacterized protein 82.3 19 0.00064 29.3 14.3 58 192-262 253-311 (343)
279 3tc9_A Hypothetical hydrolase; 82.1 12 0.0004 31.9 10.3 124 67-206 159-290 (430)
280 2mad_H Methylamine dehydrogena 81.9 21 0.00072 29.7 26.5 114 6-127 32-160 (373)
281 3p5b_L Low density lipoprotein 81.7 22 0.00076 29.8 20.5 173 67-280 92-278 (400)
282 3c75_H MADH, methylamine dehyd 81.2 25 0.00084 30.0 22.3 115 5-127 83-213 (426)
283 3lp9_A LS-24; SEED albumin, pl 81.2 3.5 0.00012 31.8 6.0 103 97-231 71-202 (227)
284 2gop_A Trilobed protease; beta 80.7 20 0.0007 28.7 16.5 101 66-179 151-257 (347)
285 1nr0_A Actin interacting prote 80.4 31 0.0011 30.7 22.3 141 67-235 212-360 (611)
286 1mda_H Methylamine dehydrogena 80.3 24 0.00083 29.3 15.9 72 5-79 30-108 (368)
287 1gen_A Gelatinase A; hydrolase 80.1 18 0.0006 27.6 16.2 146 93-281 35-204 (218)
288 1fwx_A Nitrous oxide reductase 79.9 13 0.00046 33.1 9.9 192 66-279 111-361 (595)
289 2oiz_A Aromatic amine dehydrog 79.6 24 0.00083 29.0 20.2 68 221-303 286-358 (361)
290 1su3_A Interstitial collagenas 78.6 30 0.001 29.8 11.5 104 98-234 318-436 (450)
291 3ei3_A DNA damage-binding prot 78.3 53 0.0018 32.1 18.0 170 65-259 805-986 (1158)
292 2oaj_A Protein SNI1; WD40 repe 77.5 49 0.0017 31.3 17.6 24 252-282 222-245 (902)
293 1k32_A Tricorn protease; prote 76.6 44 0.0015 32.1 13.4 109 114-237 358-468 (1045)
294 2xe4_A Oligopeptidase B; hydro 72.5 60 0.002 29.9 17.9 141 67-228 247-398 (751)
295 3ei3_A DNA damage-binding prot 72.2 77 0.0026 31.0 18.9 163 20-200 806-983 (1158)
296 3sov_A LRP-6, low-density lipo 70.7 40 0.0014 27.2 21.0 159 66-259 56-225 (318)
297 1xfd_A DIP, dipeptidyl aminope 69.9 63 0.0022 29.1 14.1 104 67-179 37-149 (723)
298 4hw6_A Hypothetical protein, I 68.9 53 0.0018 27.9 14.0 134 67-229 162-303 (433)
299 1itv_A MMP9; adaptive molecula 68.5 34 0.0012 25.5 11.2 102 98-232 64-176 (195)
300 1xfd_A DIP, dipeptidyl aminope 67.1 72 0.0025 28.7 14.8 63 164-236 228-295 (723)
301 4a5s_A Dipeptidyl peptidase 4 66.5 78 0.0027 28.9 13.0 65 67-131 36-109 (740)
302 2ece_A 462AA long hypothetical 65.3 67 0.0023 27.7 15.4 60 66-126 105-176 (462)
303 4a0p_A LRP6, LRP-6, low-densit 64.9 80 0.0027 28.4 22.2 175 66-279 14-197 (628)
304 3c75_H MADH, methylamine dehyd 62.8 66 0.0022 27.4 10.1 118 98-234 84-213 (426)
305 1ck7_A Protein (gelatinase A); 62.4 90 0.0031 28.2 12.0 145 93-280 448-616 (631)
306 3ba0_A Macrophage metalloelast 60.3 73 0.0025 26.4 12.2 106 98-235 236-355 (365)
307 3dw8_B Serine/threonine-protei 59.8 74 0.0025 26.4 13.0 24 252-282 237-261 (447)
308 4hvt_A Ritya.17583.B, post-pro 56.8 1.2E+02 0.0041 27.8 12.8 148 114-284 269-434 (711)
309 2oaj_A Protein SNI1; WD40 repe 56.6 1.3E+02 0.0046 28.3 15.2 146 98-282 28-185 (902)
310 3sov_A LRP-6, low-density lipo 56.5 77 0.0026 25.5 18.0 173 66-279 12-197 (318)
311 2cn3_A Xyloglucanase, beta-1,4 55.5 1.3E+02 0.0043 27.7 22.7 215 67-303 45-310 (737)
312 2oiz_A Aromatic amine dehydrog 55.1 85 0.0029 25.6 16.3 101 66-176 30-143 (361)
313 1jof_A Carboxy-CIS,CIS-muconat 55.0 84 0.0029 25.5 15.3 16 114-129 167-183 (365)
314 1hxn_A Hemopexin, HPX; heme, b 54.8 68 0.0023 24.4 9.4 63 94-173 68-144 (219)
315 3sjl_D Methylamine dehydrogena 54.1 96 0.0033 25.9 22.5 75 197-284 291-368 (386)
316 2be1_A Serine/threonine-protei 52.5 50 0.0017 27.1 7.4 102 164-284 20-137 (339)
317 2j04_A TAU60, YPL007P, hypothe 51.4 94 0.0032 27.7 9.3 107 145-281 96-213 (588)
318 1gen_A Gelatinase A; hydrolase 50.7 79 0.0027 23.9 11.1 20 252-280 135-154 (218)
319 4a0p_A LRP6, LRP-6, low-densit 50.5 1.4E+02 0.0048 26.8 20.9 159 66-260 58-225 (628)
320 3s94_A LRP-6, low-density lipo 49.3 1.5E+02 0.005 26.6 21.9 130 98-261 403-540 (619)
321 2qe8_A Uncharacterized protein 47.5 1.1E+02 0.0037 24.6 13.9 121 145-284 27-160 (343)
322 2p9w_A MAL S 1 allergenic prot 47.2 1.2E+02 0.004 24.9 17.0 96 66-174 99-216 (334)
323 1sqj_A OXG-RCBH, oligoxylogluc 45.5 1.9E+02 0.0065 26.8 25.1 198 68-290 38-279 (789)
324 3kya_A Putative phosphatase; s 43.6 1.6E+02 0.0056 25.5 11.4 153 98-278 151-340 (496)
325 3qqz_A Putative uncharacterize 41.2 1.2E+02 0.0043 23.5 14.8 95 145-262 38-142 (255)
326 2xe4_A Oligopeptidase B; hydro 38.5 2.4E+02 0.008 25.9 14.7 98 66-171 294-398 (751)
327 4hvt_A Ritya.17583.B, post-pro 38.5 2.4E+02 0.008 25.9 15.7 103 66-178 268-386 (711)
328 2j04_B YDR362CP, TAU91; beta p 36.8 78 0.0027 27.6 6.6 22 98-124 276-297 (524)
329 2be1_A Serine/threonine-protei 36.4 50 0.0017 27.1 4.9 99 66-179 19-138 (339)
330 3sre_A PON1, serum paraoxonase 33.1 2E+02 0.007 23.6 15.6 186 68-278 84-297 (355)
331 3kci_A Probable E3 ubiquitin-p 32.3 2.1E+02 0.0073 23.6 12.0 17 189-205 169-185 (389)
332 1z68_A Fibroblast activation p 32.0 2.8E+02 0.0096 24.8 15.4 131 66-205 223-375 (719)
333 4d9s_A UVB-resistance protein 29.8 2.4E+02 0.0082 23.4 12.8 17 189-205 235-251 (406)
334 1fwx_A Nitrous oxide reductase 28.6 3.2E+02 0.011 24.4 13.8 165 99-280 102-309 (595)
335 3s94_A LRP-6, low-density lipo 27.8 3.3E+02 0.011 24.3 18.9 161 66-260 61-231 (619)
336 3qhy_B Beta-lactamase inhibito 27.5 2.2E+02 0.0076 22.3 11.4 56 138-206 151-206 (282)
337 4d9s_A UVB-resistance protein 26.0 2.8E+02 0.0097 23.0 14.7 17 189-205 287-303 (406)
338 2ece_A 462AA long hypothetical 24.9 3.3E+02 0.011 23.4 17.1 70 98-176 95-176 (462)
339 2p9w_A MAL S 1 allergenic prot 24.2 2.9E+02 0.01 22.5 19.3 143 66-230 34-215 (334)
340 2ism_A Putative oxidoreductase 24.0 2.9E+02 0.0098 22.3 11.2 122 98-230 41-178 (352)
341 1w8o_A Bacterial sialidase; 3D 23.0 2.9E+02 0.0098 24.4 8.0 33 172-205 198-230 (601)
342 1z68_A Fibroblast activation p 22.7 4.1E+02 0.014 23.7 16.6 17 221-237 337-353 (719)
343 3k6s_A Integrin alpha-X; cell 22.4 5.5E+02 0.019 25.0 10.8 146 142-301 340-509 (1095)
344 1w8o_A Bacterial sialidase; 3D 22.2 2E+02 0.0068 25.4 6.8 125 77-205 200-340 (601)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-52 Score=351.50 Aligned_cols=280 Identities=25% Similarity=0.401 Sum_probs=249.7
Q ss_pred cccceeEEecccccceeEEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeeceEEEEeC
Q psy9754 3 EIWDWELICKEGTEGIKLLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNP 74 (306)
Q Consensus 3 ~~~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~ 74 (306)
+.++++||++||.++....+++.||+ ++|+.++++|.+|..|++ |||+||...... ....++++++||+
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~---~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPD---GNTDSSALDCYNP 97 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETT---EEEECCCEEEEET
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCC---CCeecceEEEECC
Confidence 45788999999986566668999999 789999999999999988 999999842110 0126789999999
Q ss_pred CCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEccc
Q psy9754 75 NNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGY 154 (306)
Q Consensus 75 ~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~ 154 (306)
.+++|+.++++|.+|..|+++.++++||++||.......+++++||+.+++|++++++|.+|..+++++++++||++||.
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCC
Confidence 99999999999999999999999999999999887777889999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE
Q psy9754 155 TGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK 234 (306)
Q Consensus 155 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~ 234 (306)
..... .+++++||+.+++|+.+ +++|.+|..++++.++ ++||++||..... ...++++||+.+++|+
T Consensus 178 ~~~~~---~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~--------~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 178 DGTNR---LNSAECYYPERNEWRMI-TAMNTIRSGAGVCVLH-NCIYAAGGYDGQD--------QLNSVERYDVETETWT 244 (308)
T ss_dssp CSSCB---CCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEET-TEEEEECCBCSSS--------BCCCEEEEETTTTEEE
T ss_pred CCCCc---CceEEEEeCCCCeEeeC-CCCCCccccceEEEEC-CEEEEEeCCCCCC--------ccceEEEEeCCCCcEE
Confidence 76654 68999999999999999 7889999999988887 9999999986442 2478999999999999
Q ss_pred ecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceeccCCCCcccccceeeEEe
Q psy9754 235 FVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVAL 301 (306)
Q Consensus 235 ~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~ 301 (306)
.+.++|.+|..++++.++++||++||.+. ...++++++||+++++|+. ++.||.+|..|+++++
T Consensus 245 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~--~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVHQGRIYVLGGYDG--HTFLDSVECYDPDTDTWSE-VTRMTSGRSGVGVAVT 308 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCS--SCBCCEEEEEETTTTEEEE-EEECSSCCBSCEEEEC
T ss_pred ECCCCCCCccceEEEEECCEEEEEcCcCC--CcccceEEEEcCCCCEEee-cCCCCCCcccceeEeC
Confidence 99999999999999999999999999775 2456899999999999999 7999999999999985
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.6e-52 Score=345.86 Aligned_cols=279 Identities=23% Similarity=0.357 Sum_probs=248.6
Q ss_pred cceeEEecccccceeEEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeeceEEEEeCCC
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNN 76 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t 76 (306)
.+++||++||.......+++.||+ ++|..++++|.+|..|++ ||++||..... ..+++++||+.+
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~d~~~ 86 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL-------RVRTVDSYDPVK 86 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS-------BCCCEEEEETTT
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc-------cccceEEECCCC
Confidence 478999999987666678999999 789999999999999888 99999987542 578999999999
Q ss_pred CCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCC
Q psy9754 77 KQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTG 156 (306)
Q Consensus 77 ~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~ 156 (306)
++|+.++++|.+|..|+++.++++||++||......++++++||+.+++|++++++|.+|..|++++++++||++||...
T Consensus 87 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 87 DQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEET
T ss_pred CceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCC
Confidence 99999999999999999999999999999988777788999999999999999999999999999999999999999865
Q ss_pred CCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEec
Q psy9754 157 DKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFV 236 (306)
Q Consensus 157 ~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~ 236 (306)
... ...+.+++||+.+++|+.+ +++|.+|..++++..+ ++||++||.+... ...++++||+.+++|+.+
T Consensus 167 ~~~-~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~--------~~~~~~~yd~~~~~W~~~ 235 (302)
T 2xn4_A 167 ASR-QCLSTVECYNATTNEWTYI-AEMSTRRSGAGVGVLN-NLLYAVGGHDGPL--------VRKSVEVYDPTTNAWRQV 235 (302)
T ss_dssp TTT-EECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-TEEEEECCBSSSS--------BCCCEEEEETTTTEEEEE
T ss_pred CCC-ccccEEEEEeCCCCcEEEC-CCCccccccccEEEEC-CEEEEECCCCCCc--------ccceEEEEeCCCCCEeeC
Confidence 431 1257899999999999999 7889999999988887 9999999986432 347899999999999999
Q ss_pred ccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceeccCCCCcccccceeeEEecC
Q psy9754 237 TELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALPL 303 (306)
Q Consensus 237 ~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~ 303 (306)
+.+|.+|..++++.++++||++||.+.. ..++++++||+++++|+.+...||.+|..|+++++..
T Consensus 236 ~~~~~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~ 300 (302)
T 2xn4_A 236 ADMNMCRRNAGVCAVNGLLYVVGGDDGS--CNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDK 300 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCSS--SBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC
T ss_pred CCCCCccccCeEEEECCEEEEECCcCCC--cccccEEEEcCCCCeEEECCcccCcccccceEEEecc
Confidence 9999999999999999999999998753 3568999999999999994348999999999999865
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4e-51 Score=340.99 Aligned_cols=276 Identities=25% Similarity=0.373 Sum_probs=248.3
Q ss_pred cceeEEeccc-cc-ceeEEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeeceEEEEeC
Q psy9754 5 WDWELICKEG-TE-GIKLLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNP 74 (306)
Q Consensus 5 ~~~~l~~~gG-~~-~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~ 74 (306)
.+++||++|| .+ +....+++.||+ ++|+.++++|.+|..|++ ||++||..... ..+++++||+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-------~~~~~~~~d~ 85 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-------RLSSVECLDY 85 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEET
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-------cCceEEEEEC
Confidence 4789999999 44 345568999999 789999999999999888 99999987432 5789999999
Q ss_pred CCCC---eeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEE
Q psy9754 75 NNKQ---WTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIA 151 (306)
Q Consensus 75 ~t~~---W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~ 151 (306)
.+++ |+.++++|.+|..|+++.++++||++||.......+++++||+.+++|++++++|.+|..|++++++++||++
T Consensus 86 ~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 86 TADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCL 165 (301)
T ss_dssp TCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEE
T ss_pred CCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEE
Confidence 9999 9999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCC
Q psy9754 152 GGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK 231 (306)
Q Consensus 152 GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~ 231 (306)
||...... .+.+++||+.+++|+.+ +++|.+|..++++..+ ++||++||..... ...++++||+.++
T Consensus 166 GG~~~~~~---~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~-~~i~v~GG~~~~~--------~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 166 GGYDGLNI---LNSVEKYDPHTGHWTNV-TPMATKRSGAGVALLN-DHIYVVGGFDGTA--------HLSSVEAYNIRTD 232 (301)
T ss_dssp CCBCSSCB---CCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-TEEEEECCBCSSS--------BCCCEEEEETTTT
T ss_pred CCCCCCcc---cceEEEEeCCCCcEEeC-CCCCcccccceEEEEC-CEEEEEeCCCCCc--------ccceEEEEeCCCC
Confidence 99876543 68999999999999999 7889999999988887 9999999986543 2478999999999
Q ss_pred ceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceeccCCCCcccccceeeEEecC
Q psy9754 232 EWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALPL 303 (306)
Q Consensus 232 ~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~ 303 (306)
+|+.++.+|.+|..++++.++++||++||.+.. ..++++++||+++++|+. ++.||.+|..|++++++.
T Consensus 233 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~v~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~ 301 (301)
T 2vpj_A 233 SWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN--SLLSSIECYDPIIDSWEV-VTSMGTQRCDAGVCVLRE 301 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEECCBCSS--SBEEEEEEEETTTTEEEE-EEEEEEEEESCEEEEEEC
T ss_pred cEEECCCCCCcccceeEEEECCEEEEEcCcCCC--cccccEEEEcCCCCeEEE-cCCCCcccccceEEEeCC
Confidence 999999999999999999999999999997753 356899999999999999 789999999999999864
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.8e-51 Score=341.27 Aligned_cols=275 Identities=20% Similarity=0.333 Sum_probs=245.8
Q ss_pred ceeEEecccccceeEEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeeceEEEEeCCCC
Q psy9754 6 DWELICKEGTEGIKLLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNK 77 (306)
Q Consensus 6 ~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~ 77 (306)
.+.||++||... ..+++.||+ ++|+.++++|.+|.+|++ |||+||.. .. .++++++||+.++
T Consensus 11 ~~~l~~~GG~~~--~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~-------~~~~~~~~d~~~~ 80 (306)
T 3ii7_A 11 HDYRIALFGGSQ--PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LF-------PIKRMDCYNVVKD 80 (306)
T ss_dssp CCEEEEEECCSS--TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SS-------BCCEEEEEETTTT
T ss_pred cceEEEEeCCCC--CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CC-------CcceEEEEeCCCC
Confidence 468999999866 457899999 789999999999999998 99999987 21 6899999999999
Q ss_pred CeeeCCCCCCCccceeeEEECCEEEEEccCC-CCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCC
Q psy9754 78 QWTQEPNMTYPRKIFSFVSCLDKIYAIGGQD-CKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTG 156 (306)
Q Consensus 78 ~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~ 156 (306)
+|+.++++|.+|..|+++.++++||++||.+ .....+++++||+.+++|++++++|.+|..|+++.++++||++||...
T Consensus 81 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 81 SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp EEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEES
T ss_pred eEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCC
Confidence 9999999999999999999999999999987 446789999999999999999999999999999999999999999765
Q ss_pred CCC-CCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe
Q psy9754 157 DKM-NPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF 235 (306)
Q Consensus 157 ~~~-~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~ 235 (306)
... ....+++++||+++++|+.+ ++++.+|..++++.++ ++||++||..... ...++++||+.+++|+.
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~i~v~GG~~~~~--------~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTEL-CPMIEARKNHGLVFVK-DKIFAVGGQNGLG--------GLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-TEEEEECCEETTE--------EBCCEEEEETTTTEEEE
T ss_pred CCCcccccceEEEeCCCCCeEEEC-CCccchhhcceEEEEC-CEEEEEeCCCCCC--------CCceEEEeeCCCCcEEE
Confidence 432 11257899999999999999 7889999999998887 9999999976442 35789999999999999
Q ss_pred cccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceeccCCCCcccccceeeEEecC
Q psy9754 236 VTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALPL 303 (306)
Q Consensus 236 ~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~ 303 (306)
++.+|.+|..++++.++++||++||.+.. ..++++++||+++++|+. ++.+|.+|..|+++++..
T Consensus 231 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 231 VSPMPWKGVTVKCAAVGSIVYVLAGFQGV--GRLGHILEYNTETDKWVA-NSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp CCCCSCCBSCCEEEEETTEEEEEECBCSS--SBCCEEEEEETTTTEEEE-EEEEECCSCTTCEEEEEE
T ss_pred CCCCCCCccceeEEEECCEEEEEeCcCCC--eeeeeEEEEcCCCCeEEe-CCCcccccceeEEEEECC
Confidence 99999999999999999999999998753 456899999999999999 789999999999999865
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.4e-49 Score=328.97 Aligned_cols=275 Identities=22% Similarity=0.373 Sum_probs=235.1
Q ss_pred cceeEEecccccceeEEEEEEeec--Cceeeecccc--cccccceE------EEEeCccCcCCCCcccceeeceEEEEeC
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDI--VTYDLSIERV--SQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNP 74 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p--~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~ 74 (306)
.++.|+++|| .+++.||+ ++|.. +++| .+|.+|++ |||+||........ .....+++++||+
T Consensus 3 ~~~~l~~~GG------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-~~~~~~~~~~~d~ 74 (315)
T 4asc_A 3 LQDLIFMISE------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNK-EDPMSAYFLQFDH 74 (315)
T ss_dssp CEEEEEEEET------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCS-SSCEEEEEEEEET
T ss_pred cceEEEEEcC------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCC-ccccccceEEecC
Confidence 4678999999 46889999 78986 6664 47988888 99999974321111 1125677999999
Q ss_pred CCCCeeeCCCCCCCccceeeEEECCEEEEEccCCC---CCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEE
Q psy9754 75 NNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDC---KTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIA 151 (306)
Q Consensus 75 ~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~ 151 (306)
.+++|+.++++|.+|..|+++.++++||++||... ....+++++||+.+++|++++++|.+|..|+++.++++||++
T Consensus 75 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 154 (315)
T 4asc_A 75 LDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVI 154 (315)
T ss_dssp TTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred CCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEE
Confidence 99999999999999999999999999999999752 467899999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCC
Q psy9754 152 GGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK 231 (306)
Q Consensus 152 GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~ 231 (306)
||...... ..+++++||+.+++|+.+ +++|.+|..++++.++ ++||++||..... ...++++||+.++
T Consensus 155 GG~~~~~~--~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~--------~~~~~~~yd~~~~ 222 (315)
T 4asc_A 155 GGKGSDRK--CLNKMCVYDPKKFEWKEL-APMQTARSLFGATVHD-GRIIVAAGVTDTG--------LTSSAEVYSITDN 222 (315)
T ss_dssp CCBCTTSC--BCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEET-TEEEEEEEECSSS--------EEEEEEEEETTTT
T ss_pred eCCCCCCc--ccceEEEEeCCCCeEEEC-CCCCCchhceEEEEEC-CEEEEEeccCCCC--------ccceEEEEECCCC
Confidence 99843332 368999999999999999 7889999999998887 9999999986442 3578999999999
Q ss_pred ceEecccCCcccccceeeeeCCEEEEEeCccCcc-------ccccceEEEeeccccceeccCCCCcccccceeeEEec
Q psy9754 232 EWKFVTELVVPRHAHSASVLSSQILIIGGVTTVY-------KRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALP 302 (306)
Q Consensus 232 ~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~ 302 (306)
+|+.++++|.+|..++++.++++||++||.+... ...++++++||+++++|+.+ +|.+|..|+++++.
T Consensus 223 ~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~~~~r~~~~~~~~~ 297 (315)
T 4asc_A 223 KWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV---LREIAYAAGATFLP 297 (315)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE---ESCSSCCSSCEEEE
T ss_pred eEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh---ccCCcCccceEEeC
Confidence 9999999999999999999999999999986421 13568999999999999994 78889999999875
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-48 Score=324.96 Aligned_cols=275 Identities=24% Similarity=0.413 Sum_probs=232.5
Q ss_pred cceeEEecccccceeEEEEEEeec--Cceeeecccc--cccccceE------EEEeCccCcCCCCcccceeeceEEEEeC
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDI--VTYDLSIERV--SQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNP 74 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p--~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~ 74 (306)
.++.||++||. .++.||+ ++|... ++| .+|.+|++ ||++||......... ....+.+++||+
T Consensus 14 ~~~~i~~~GG~------~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~-~~~~~~~~~~d~ 85 (318)
T 2woz_A 14 VKDLILLVNDT------AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKD-QPLQSYFFQLDN 85 (318)
T ss_dssp EEEEEEEECSS------EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC--------CCCBEEEEEET
T ss_pred ecchhhhcccc------ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccC-CCccccEEEEeC
Confidence 46789999994 2689999 789874 444 67888887 999999643221100 013456999999
Q ss_pred CCCCeeeCCCCCCCccceeeEEECCEEEEEccCC--CCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEc
Q psy9754 75 NNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQD--CKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAG 152 (306)
Q Consensus 75 ~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~G 152 (306)
.+++|+.++++|.+|..|+++.++++||++||.. .....+++++||+.+++|++++++|.+|.+|++++++++||++|
T Consensus 86 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 165 (318)
T 2woz_A 86 VSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLG 165 (318)
T ss_dssp TTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEEC
T ss_pred CCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEc
Confidence 9999999999999999999999999999999986 34667899999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 153 GYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 153 G~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
|...... ..+++++||+.+++|+++ +++|.+|..++++.++ ++||++||..... ...++++||+++++
T Consensus 166 G~~~~~~--~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~--------~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 166 GKTDDKK--CTNRVFIYNPKKGDWKDL-APMKTPRSMFGVAIHK-GKIVIAGGVTEDG--------LSASVEAFDLKTNK 233 (318)
T ss_dssp CEESSSC--BCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-TEEEEEEEEETTE--------EEEEEEEEETTTCC
T ss_pred CCCCCCC--ccceEEEEcCCCCEEEEC-CCCCCCcccceEEEEC-CEEEEEcCcCCCC--------ccceEEEEECCCCe
Confidence 9754332 268999999999999999 7889999999988887 9999999986432 35789999999999
Q ss_pred eEecccCCcccccceeeeeCCEEEEEeCccCcc-------ccccceEEEeeccccceeccCCCCcccccceeeEEec
Q psy9754 233 WKFVTELVVPRHAHSASVLSSQILIIGGVTTVY-------KRTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALP 302 (306)
Q Consensus 233 W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~ 302 (306)
|+.++++|.+|..|+++.++++||++||..... ....+++++||+++++|+.+ +|.+|..|++++++
T Consensus 234 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~~~~r~~~~~~~~~ 307 (318)
T 2woz_A 234 WEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM---LKEIRYASGASCLA 307 (318)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE---ESCCGGGTTCEEEE
T ss_pred EEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh---cccccccccceeeC
Confidence 999999999999999999999999999986521 13468999999999999994 89999999999875
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-43 Score=296.91 Aligned_cols=242 Identities=23% Similarity=0.425 Sum_probs=209.2
Q ss_pred cccccccceE------EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccC---
Q psy9754 37 RVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQ--- 107 (306)
Q Consensus 37 ~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~--- 107 (306)
-|.+|..+++ ||++||... . .++++++||+.+++|+.++++|.+|..|+++.++++||++||.
T Consensus 11 ~~~~~~~~~~~~~~~~i~v~GG~~~-~-------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 82 (308)
T 1zgk_A 11 SGLVPRGSHAPKVGRLIYTAGGYFR-Q-------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNS 82 (308)
T ss_dssp ----------CCCCCCEEEECCBSS-S-------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEE
T ss_pred CCeeeCCccccCCCCEEEEEeCcCC-C-------CcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCC
Confidence 3455666665 999999821 1 5789999999999999999999999999999999999999998
Q ss_pred -CCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCc
Q psy9754 108 -DCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYP 186 (306)
Q Consensus 108 -~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~ 186 (306)
......+++++||+.+++|++++++|.+|..+++++++++||++||...... .+.+++||+.+++|+.+ +++|.+
T Consensus 83 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~-~~~p~~ 158 (308)
T 1zgk_A 83 PDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIH---HNSVERYEPERDEWHLV-APMLTR 158 (308)
T ss_dssp TTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEE---CCCEEEEETTTTEEEEC-CCCSSC
T ss_pred CCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcc---cccEEEECCCCCeEeEC-CCCCcc
Confidence 4446678999999999999999999999999999999999999999876443 68899999999999999 788999
Q ss_pred ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccc
Q psy9754 187 RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYK 266 (306)
Q Consensus 187 ~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~ 266 (306)
|..++++.++ ++||++||..... ...++++||+.+++|+.++++|.+|..++++.++++||++||.+..
T Consensus 159 r~~~~~~~~~-~~iyv~GG~~~~~--------~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-- 227 (308)
T 1zgk_A 159 RIGVGVAVLN-RLLYAVGGFDGTN--------RLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQ-- 227 (308)
T ss_dssp CBSCEEEEET-TEEEEECCBCSSC--------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS--
T ss_pred ccceEEEEEC-CEEEEEeCCCCCC--------cCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCC--
Confidence 9999998887 9999999986543 2478999999999999999999999999999999999999998753
Q ss_pred cccceEEEeeccccceeccCCCCcccccceeeEEec
Q psy9754 267 RTLKSVECWCFDRQAWIKGVSGLPATILGHSSVALP 302 (306)
Q Consensus 267 ~~~~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~ 302 (306)
...+++++||+++++|+. ++.+|.+|..|+++++.
T Consensus 228 ~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~ 262 (308)
T 1zgk_A 228 DQLNSVERYDVETETWTF-VAPMKHRRSALGITVHQ 262 (308)
T ss_dssp SBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEET
T ss_pred CccceEEEEeCCCCcEEE-CCCCCCCccceEEEEEC
Confidence 346899999999999999 78999999999999875
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=295.49 Aligned_cols=242 Identities=23% Similarity=0.427 Sum_probs=210.5
Q ss_pred cccccceE---EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCce
Q psy9754 39 SQRYDVKI---NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSS 115 (306)
Q Consensus 39 ~~r~~~~~---i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 115 (306)
.||....+ ||++||.... ..+++++||+.+++|..++++|.+|..|+++.++++||++||.......++
T Consensus 7 ~~r~~~~~~~~i~v~GG~~~~--------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 78 (302)
T 2xn4_A 7 RLRTPMNLPKLMVVVGGQAPK--------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRT 78 (302)
T ss_dssp --------CEEEEEECCBSSS--------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCC
T ss_pred cCCcccCCCCEEEEECCCCCC--------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccc
Confidence 45544433 9999997642 478899999999999999999999999999999999999999887777899
Q ss_pred eEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE
Q psy9754 116 VECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV 195 (306)
Q Consensus 116 ~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~ 195 (306)
+++||+.+++|++++++|.+|..|++++++++||++||...... .+++++||+.+++|+.+ +++|.+|..++++.+
T Consensus 79 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~ 154 (302)
T 2xn4_A 79 VDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTG---LSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVV 154 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCE---EEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEE
T ss_pred eEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCcc---CceEEEEeCCCCeEeec-CCCCCcccCceEEEE
Confidence 99999999999999999999999999999999999999875443 68999999999999999 888999999998888
Q ss_pred eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEe
Q psy9754 196 NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECW 275 (306)
Q Consensus 196 ~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~y 275 (306)
+ ++||++||...... ....++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. ...+++++|
T Consensus 155 ~-~~iyv~GG~~~~~~------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~y 225 (302)
T 2xn4_A 155 G-GLLYAVGGYDVASR------QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP--LVRKSVEVY 225 (302)
T ss_dssp T-TEEEEECCEETTTT------EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS--SBCCCEEEE
T ss_pred C-CEEEEEeCCCCCCC------ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCC--cccceEEEE
Confidence 7 99999999854321 13578999999999999999999999999999999999999998753 346899999
Q ss_pred eccccceeccCCCCcccccceeeEEec
Q psy9754 276 CFDRQAWIKGVSGLPATILGHSSVALP 302 (306)
Q Consensus 276 d~~~~~W~~~~~~~p~~r~~~~~~~~~ 302 (306)
|+++++|+. ++.+|.+|..|+++++.
T Consensus 226 d~~~~~W~~-~~~~~~~r~~~~~~~~~ 251 (302)
T 2xn4_A 226 DPTTNAWRQ-VADMNMCRRNAGVCAVN 251 (302)
T ss_dssp ETTTTEEEE-ECCCSSCCBSCEEEEET
T ss_pred eCCCCCEee-CCCCCCccccCeEEEEC
Confidence 999999999 78999999999998874
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.3e-43 Score=293.10 Aligned_cols=242 Identities=21% Similarity=0.366 Sum_probs=210.9
Q ss_pred ccccc-ceEEEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeE
Q psy9754 39 SQRYD-VKINSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVE 117 (306)
Q Consensus 39 ~~r~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 117 (306)
.||.. +..||++||... .+++++||+.+++|+.++++|.+|..|+++.++++||++||.. ....++++
T Consensus 5 ~pr~~~~~~l~~~GG~~~----------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~ 73 (306)
T 3ii7_A 5 RPRRKKHDYRIALFGGSQ----------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMD 73 (306)
T ss_dssp -----CCCEEEEEECCSS----------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEE
T ss_pred cCCccccceEEEEeCCCC----------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEE
Confidence 34443 346999999754 5889999999999999999999999999999999999999988 66779999
Q ss_pred EEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeC
Q psy9754 118 CYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNN 197 (306)
Q Consensus 118 ~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~ 197 (306)
+||+.+++|++++++|.+|..|++++++++||++||...... ..+.+++||+.+++|+.+ +++|.+|..++++..+
T Consensus 74 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~- 149 (306)
T 3ii7_A 74 CYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNS--ALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEAN- 149 (306)
T ss_dssp EEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBS--CCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-
T ss_pred EEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCc--EeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEEC-
Confidence 999999999999999999999999999999999999863322 268999999999999999 8899999999998887
Q ss_pred CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeec
Q psy9754 198 EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 198 ~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
++||++||....... .....++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. ..++++++||+
T Consensus 150 ~~iyv~GG~~~~~~~----~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~~~~yd~ 223 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVS----GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL--GGLDNVEYYDI 223 (306)
T ss_dssp TEEEEECCEESCTTT----CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT--EEBCCEEEEET
T ss_pred CEEEEECCCCCCCCc----ccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC--CCCceEEEeeC
Confidence 999999997644320 012578999999999999999999999999999999999999998753 45689999999
Q ss_pred cccceeccCCCCcccccceeeEEec
Q psy9754 278 DRQAWIKGVSGLPATILGHSSVALP 302 (306)
Q Consensus 278 ~~~~W~~~~~~~p~~r~~~~~~~~~ 302 (306)
++++|+. ++.+|.+|..|+++++.
T Consensus 224 ~~~~W~~-~~~~p~~r~~~~~~~~~ 247 (306)
T 3ii7_A 224 KLNEWKM-VSPMPWKGVTVKCAAVG 247 (306)
T ss_dssp TTTEEEE-CCCCSCCBSCCEEEEET
T ss_pred CCCcEEE-CCCCCCCccceeEEEEC
Confidence 9999999 78999999999999874
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.3e-43 Score=302.53 Aligned_cols=273 Identities=18% Similarity=0.217 Sum_probs=215.1
Q ss_pred cccceeEEecccccceeEEEEEEeec----Cceeeecccc-cccccceE------EEEeCccCcCCCCcccceeeceEEE
Q psy9754 3 EIWDWELICKEGTEGIKLLVIWIMDI----VTYDLSIERV-SQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWS 71 (306)
Q Consensus 3 ~~~~~~l~~~gG~~~~~~~~~~~~~~----~~W~~~~~~p-~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~ 71 (306)
++++++|||+||.... +++.||+ ++|+.++++| .+|..|++ |||+||...... .....++++++
T Consensus 16 ~~~~~~iyv~GG~~~~---~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~--~~~~~~~~v~~ 90 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGT---AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSE--GLTQVFNDVHK 90 (357)
T ss_dssp EEETTEEEEECGGGTT---CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTT--SCEEECCCEEE
T ss_pred EEECCEEEEEeCcCCC---eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCC--ccceeeccEEE
Confidence 3568999999998654 5788988 5799999999 89999988 999999822100 11236899999
Q ss_pred EeCCCCCeeeCCCCC-CCccceeeEEECCEEEEEccCCCC----------------------------------CCCcee
Q psy9754 72 FNPNNKQWTQEPNMT-YPRKIFSFVSCLDKIYAIGGQDCK----------------------------------TLLSSV 116 (306)
Q Consensus 72 ~d~~t~~W~~~~~~~-~~~~~~~~~~~~~~iyv~GG~~~~----------------------------------~~~~~~ 116 (306)
||+.+++|+.+++++ .+|..|+++.++++||++||.... ..++++
T Consensus 91 yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (357)
T 2uvk_A 91 YNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170 (357)
T ss_dssp EETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE
T ss_pred EeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE
Confidence 999999999999988 889999999999999999997643 246899
Q ss_pred EEEeCCCCcEEeccCCcccccc-eeeEEECCEEEEEcccCCCCCCCCCccEEEEeC--CCCeeEEcccccCCc--ceeEE
Q psy9754 117 ECYDPVAHTWEDVAPLKIARMG-MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDP--RTNTWTTLATKLRYP--RYLAT 191 (306)
Q Consensus 117 ~~~d~~~~~w~~~~~~~~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~~~~~--~~~~~ 191 (306)
++||+.+++|+.++++|.++.. +++++++++||++||...... ..+.+++||+ ++++|+.+ ..++.+ |..++
T Consensus 171 ~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~--~~~~v~~~d~d~~~~~W~~~-~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 171 LSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGL--RTDAVFELDFTGNNLKWNKL-APVSSPDGVAGGF 247 (357)
T ss_dssp EEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTE--ECCCEEEEECC---CEEEEC-CCSSTTTCCBSCE
T ss_pred EEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCc--ccCceEEEEecCCCCcEEec-CCCCCCcccccce
Confidence 9999999999999999976555 899999999999999764432 2578888976 99999999 666555 45677
Q ss_pred EEEEeCCEEEEEcCCCCCCCCC---------cccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCcc
Q psy9754 192 LVSVNNEKLYIIGGASQTDATN---------TQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVT 262 (306)
Q Consensus 192 ~~~~~~~~iyi~GG~~~~~~~~---------~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~ 262 (306)
++..+ ++||++||........ ......+.++++||+++++|+.++.+|.+|..|+++.++++|||+||.+
T Consensus 248 ~~~~~-~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 248 AGISN-DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGET 326 (357)
T ss_dssp EEEET-TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEEC
T ss_pred EEEEC-CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeC
Confidence 77777 9999999975321100 0001124678999999999999999999999999999999999999987
Q ss_pred CccccccceEEEeeccccceecc
Q psy9754 263 TVYKRTLKSVECWCFDRQAWIKG 285 (306)
Q Consensus 263 ~~~~~~~~~~~~yd~~~~~W~~~ 285 (306)
... ..++++++|+.++++|.++
T Consensus 327 ~~~-~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 327 AGG-KAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp GGG-CEEEEEEEEEC-CCSCEEE
T ss_pred CCC-CEeeeEEEEEEcCcEeEee
Confidence 532 3468999999999999884
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=287.30 Aligned_cols=234 Identities=27% Similarity=0.528 Sum_probs=210.9
Q ss_pred EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc-
Q psy9754 47 NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT- 125 (306)
Q Consensus 47 i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~- 125 (306)
||++||..... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.......+++++||+.+++
T Consensus 17 i~~~GG~~~~~------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 17 LLVVGGFGSQQ------SPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp EEEECCEETTT------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred EEEEeCccCCC------cceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 99999943322 26889999999999999999999999999999999999999998877778999999999999
Q ss_pred --EEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEE
Q psy9754 126 --WEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYII 203 (306)
Q Consensus 126 --w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~ 203 (306)
|++++++|.+|..|+++.++++||++||...... .+++++||+.+++|+.+ +++|.+|..++++..+ ++||++
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~---~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~-~~iyv~ 165 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRR---HTSMERYDPNIDQWSML-GDMQTAREGAGLVVAS-GVIYCL 165 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCB---CCEEEEEETTTTEEEEE-EECSSCCBSCEEEEET-TEEEEE
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcc---cceEEEEcCCCCeEEEC-CCCCCCcccceEEEEC-CEEEEE
Confidence 9999999999999999999999999999876543 68999999999999999 7888999999988887 999999
Q ss_pred cCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 204 GGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 204 GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
||..... ...++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. ...+++++||+++++|+
T Consensus 166 GG~~~~~--------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~--~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 166 GGYDGLN--------ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGT--AHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp CCBCSSC--------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS--SBCCCEEEEETTTTEEE
T ss_pred CCCCCCc--------ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCC--cccceEEEEeCCCCcEE
Confidence 9976543 3578999999999999999999999999999999999999998753 34689999999999999
Q ss_pred ccCCCCcccccceeeEEec
Q psy9754 284 KGVSGLPATILGHSSVALP 302 (306)
Q Consensus 284 ~~~~~~p~~r~~~~~~~~~ 302 (306)
. ++.+|.+|..|+++++.
T Consensus 236 ~-~~~~p~~r~~~~~~~~~ 253 (301)
T 2vpj_A 236 T-VTSMTTPRCYVGATVLR 253 (301)
T ss_dssp E-ECCCSSCCBSCEEEEET
T ss_pred E-CCCCCCcccceeEEEEC
Confidence 9 78999999999999875
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=288.67 Aligned_cols=248 Identities=22% Similarity=0.316 Sum_probs=210.2
Q ss_pred cccceeEEecccc-------cceeEEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeec
Q psy9754 3 EIWDWELICKEGT-------EGIKLLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSN 67 (306)
Q Consensus 3 ~~~~~~l~~~gG~-------~~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~ 67 (306)
++.+++||++||. ......+++.||+ ++|+.++++|.+|..|++ |||+||....... ..++
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~----~~~~ 117 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGE----RCLD 117 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTC----CBCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCC----cccc
Confidence 3568999999995 1223446999999 789999999999999988 9999997642111 2689
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccC-CCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQ-DCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
++++||+.+++|+.++++|.+|..|+++.++++||++||. ......+++++||+.+++|++++++|.+|..|+++++++
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 197 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG 197 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred eEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC
Confidence 9999999999999999999999999999999999999998 444778999999999999999999999999999999999
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCc-ccccccceeeE
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNT-QKMYSVSDLDV 225 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~-~~~~~~~~~~~ 225 (306)
+||++||...... .+.+++||+++++|+.+ +++|.+|..++++.++ ++||++||.+.....+. .......++++
T Consensus 198 ~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~~~~~~v~~ 272 (315)
T 4asc_A 198 RIIVAAGVTDTGL---TSSAEVYSITDNKWAPF-EAFPQERSSLSLVSLV-GTLYAIGGFATLETESGELVPTELNDIWR 272 (315)
T ss_dssp EEEEEEEECSSSE---EEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEET-TEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred EEEEEeccCCCCc---cceEEEEECCCCeEEEC-CCCCCcccceeEEEEC-CEEEEECCccccCcCCccccccccCcEEE
Confidence 9999999876543 68999999999999999 7889999999998888 99999999753211000 01124578999
Q ss_pred EECCCCceEecccCCcccccceeeeeCCEEEEEeCc
Q psy9754 226 FVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGV 261 (306)
Q Consensus 226 y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~ 261 (306)
||+++++|+.+ ++.+|..++++.++++||++...
T Consensus 273 yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 273 YNEEEKKWEGV--LREIAYAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp EETTTTEEEEE--ESCSSCCSSCEEEEEEECGGGSE
T ss_pred ecCCCChhhhh--ccCCcCccceEEeCCEEEEEEeh
Confidence 99999999999 67789999999999999998653
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-41 Score=285.26 Aligned_cols=245 Identities=25% Similarity=0.357 Sum_probs=207.2
Q ss_pred cccceeEEeccccc----ce--e-EEEEEEeec--CceeeecccccccccceE------EEEeCccCcCCCCcccceeec
Q psy9754 3 EIWDWELICKEGTE----GI--K-LLVIWIMDI--VTYDLSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSN 67 (306)
Q Consensus 3 ~~~~~~l~~~gG~~----~~--~-~~~~~~~~~--~~W~~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~ 67 (306)
+..+++||++||.. +. . ...++.||+ ++|+.++++|.+|..|++ |||+||...... ..++
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~ 127 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTE-----ASLD 127 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTC-----CEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCC-----cccc
Confidence 35688999999952 11 1 224899999 799999999999999988 999999864221 2689
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCC-CCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCK-TLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
++++||+.+++|+.++++|.+|..|+++.++++||++||.... ...+++++||+.+++|++++++|.+|..|+++++++
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 207 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG 207 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECC
Confidence 9999999999999999999999999999999999999997543 567899999999999999999999999999999999
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcc-cccccceeeE
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQ-KMYSVSDLDV 225 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~-~~~~~~~~~~ 225 (306)
+||++||...... .+.+++||+++++|+.+ +++|.+|..++++.++ ++||++||.......+.. ......++++
T Consensus 208 ~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 208 KIVIAGGVTEDGL---SASVEAFDLKTNKWEVM-TEFPQERSSISLVSLA-GSLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp EEEEEEEEETTEE---EEEEEEEETTTCCEEEC-CCCSSCCBSCEEEEET-TEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred EEEEEcCcCCCCc---cceEEEEECCCCeEEEC-CCCCCcccceEEEEEC-CEEEEECCeeccCCCCceeccceeeeEEE
Confidence 9999999876543 68999999999999999 7889999999988888 999999998643211110 0123578999
Q ss_pred EECCCCceEecccCCcccccceeeeeCCEEEEEe
Q psy9754 226 FVSNEKEWKFVTELVVPRHAHSASVLSSQILIIG 259 (306)
Q Consensus 226 y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~G 259 (306)
||+++++|+.+ +|.+|..|+++.++++||++.
T Consensus 283 yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 283 YEDDKKEWAGM--LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp EETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGG
T ss_pred EeCCCCEehhh--cccccccccceeeCCEEEEEE
Confidence 99999999999 788999999999999999874
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.9e-41 Score=289.18 Aligned_cols=249 Identities=16% Similarity=0.249 Sum_probs=202.0
Q ss_pred eecccccccccceE------EEEeCccCcCCCCcccceeeceEEEEeCC--CCCeeeCCCCC-CCccceeeEEECCEEEE
Q psy9754 33 LSIERVSQRYDVKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNPN--NKQWTQEPNMT-YPRKIFSFVSCLDKIYA 103 (306)
Q Consensus 33 ~~~~~p~~r~~~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~--t~~W~~~~~~~-~~~~~~~~~~~~~~iyv 103 (306)
.++++|.+|.++++ |||+||... +++++||+. +++|+.++++| .+|..|+++.++++|||
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~-----------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv 70 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAG-----------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYV 70 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGT-----------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCC-----------CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEE
Confidence 57899999998877 999999752 479999998 49999999999 89999999999999999
Q ss_pred EccC-C----CCCCCceeEEEeCCCCcEEeccCCc-ccccceeeEEECCEEEEEcccCCCCC------------------
Q psy9754 104 IGGQ-D----CKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAVAEINDKIWIAGGYTGDKM------------------ 159 (306)
Q Consensus 104 ~GG~-~----~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~~~~~~~iyv~GG~~~~~~------------------ 159 (306)
+||. . ....++++++||+.+++|+++++++ .+|..|++++.+++||++||......
T Consensus 71 ~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~ 150 (357)
T 2uvk_A 71 FGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAID 150 (357)
T ss_dssp ECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred EcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchh
Confidence 9998 2 1255789999999999999999998 89999999999999999999764310
Q ss_pred -------------CCCCccEEEEeCCCCeeEEcccccCCccee-EEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeE
Q psy9754 160 -------------NPVTDKVECYDPRTNTWTTLATKLRYPRYL-ATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDV 225 (306)
Q Consensus 160 -------------~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~ 225 (306)
....+.+++||+.+++|+.+ .++|.++.. ++++..+ ++||++||..... ....++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~-~~iyv~GG~~~~~-------~~~~~v~~ 221 (357)
T 2uvk_A 151 KINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA-GESPWYGTAGAAVVNKG-DKTWLINGEAKPG-------LRTDAVFE 221 (357)
T ss_dssp HHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE-EECSSCCCBSCEEEEET-TEEEEECCEEETT-------EECCCEEE
T ss_pred hhhhhhccccccccCCcccEEEEeCCCCcEEEC-CCCCCCCcccccEEEEC-CEEEEEeeecCCC-------cccCceEE
Confidence 01257999999999999999 777766544 7887777 9999999975432 13467888
Q ss_pred EEC--CCCceEecccCCccc--ccceeeeeCCEEEEEeCccCcc---------------ccccceEEEeeccccceeccC
Q psy9754 226 FVS--NEKEWKFVTELVVPR--HAHSASVLSSQILIIGGVTTVY---------------KRTLKSVECWCFDRQAWIKGV 286 (306)
Q Consensus 226 y~~--~~~~W~~~~~~p~~~--~~~~~~~~~~~i~v~GG~~~~~---------------~~~~~~~~~yd~~~~~W~~~~ 286 (306)
||+ .+++|+.+..+|.+| ..++++.++++||++||..... ...+.++++||+++++|+. +
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~-~ 300 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK-S 300 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE-E
T ss_pred EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee-C
Confidence 986 899999999887664 4677888999999999975321 1234689999999999999 7
Q ss_pred CCCcccccceeeEEec
Q psy9754 287 SGLPATILGHSSVALP 302 (306)
Q Consensus 287 ~~~p~~r~~~~~~~~~ 302 (306)
+.+|.+|..|+++++.
T Consensus 301 ~~~p~~r~~~~~~~~~ 316 (357)
T 2uvk_A 301 GELSQGRAYGVSLPWN 316 (357)
T ss_dssp EECSSCCBSSEEEEET
T ss_pred CCCCCCcccceeEEeC
Confidence 8999999999998765
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.5e-37 Score=283.61 Aligned_cols=258 Identities=18% Similarity=0.190 Sum_probs=208.9
Q ss_pred cceeEEecccccceeEEEEEEeec--Cceeeec-c-----cccccccceE--------EEEeCccCcCCCCcccceeece
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDI--VTYDLSI-E-----RVSQRYDVKI--------NSLAGGVDPSSDEKTTDIVSNS 68 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~-~-----~p~~r~~~~~--------i~v~GG~~~~~~~~~~~~~~~~ 68 (306)
.+++|||+||.......+++.||+ ++|+.++ + +|.+|.+|++ |||+||...... .+++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~------~~~d 469 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ------GLSD 469 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC------BCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC------cccc
Confidence 688999999986655668999999 7899987 5 7899999887 689999876432 5789
Q ss_pred EEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC---CcccccceeeEEE
Q psy9754 69 VWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP---LKIARMGMAVAEI 144 (306)
Q Consensus 69 ~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~---~~~~~~~~~~~~~ 144 (306)
+++||+.+++|+.++++|.+|..|+++.+ +++|||+||..... ++++||+.+++|+.+++ +|.+|.+|+++++
T Consensus 470 v~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~ 546 (695)
T 2zwa_A 470 NWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEF 546 (695)
T ss_dssp CEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEE
T ss_pred EEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEE
Confidence 99999999999999999999999999997 99999999987654 89999999999999986 8899999998887
Q ss_pred C---CEEEEEcccCCCCCCCCCccEEEEeCCCCe------eEEcccc-cCCcceeEEEEEEeCCEEEEEcCCCCCCCCCc
Q psy9754 145 N---DKIWIAGGYTGDKMNPVTDKVECYDPRTNT------WTTLATK-LRYPRYLATLVSVNNEKLYIIGGASQTDATNT 214 (306)
Q Consensus 145 ~---~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~------W~~~~~~-~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~ 214 (306)
+ ++||++||...... ...+++++||+.+++ |+.+ .. ++.+|.+++++.+++++||++||.+.....
T Consensus 547 ~~~~~~iyv~GG~~~~~~-~~~~~v~~yd~~~~~w~~~~~W~~~-~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~-- 622 (695)
T 2zwa_A 547 DPVSKQGIILGGGFMDQT-TVSDKAIIFKYDAENATEPITVIKK-LQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLF-- 622 (695)
T ss_dssp ETTTTEEEEECCBCTTSS-CBCCEEEEEEECTTCSSCCEEEEEE-EECGGGCCBSCEEEEEETTEEEEECCBCSSCCC--
T ss_pred eCCCCEEEEECCcCCCCC-eeeCcEEEEEccCCccccceEEEEc-CCCCCCCcccceEEEeCCCEEEEECCccCCCCC--
Confidence 6 89999999865431 136899999999999 8988 44 358899999888887899999997643211
Q ss_pred ccccccceeeEEECCCCceEecccCCc--------ccccceeeeeCC-EEEEEeCccCcc--ccccceEEEeeccc
Q psy9754 215 QKMYSVSDLDVFVSNEKEWKFVTELVV--------PRHAHSASVLSS-QILIIGGVTTVY--KRTLKSVECWCFDR 279 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~~W~~~~~~p~--------~~~~~~~~~~~~-~i~v~GG~~~~~--~~~~~~~~~yd~~~ 279 (306)
....++++||+.+++|+.+. +|. .+..|+++.+++ +|||+||..... ....+.+|.+|+.+
T Consensus 623 ---~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 623 ---DRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp ---CTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred ---CCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 23578999999999999653 221 345677777755 999999976432 23456788887764
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6.5e-37 Score=280.87 Aligned_cols=252 Identities=13% Similarity=0.198 Sum_probs=208.1
Q ss_pred ceeeecccccccccceE-----EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCC-C-----CCCCccceeeEEE-
Q psy9754 30 TYDLSIERVSQRYDVKI-----NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEP-N-----MTYPRKIFSFVSC- 97 (306)
Q Consensus 30 ~W~~~~~~p~~r~~~~~-----i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~-~-----~~~~~~~~~~~~~- 97 (306)
+|...+..|.+|.++++ |||+||... . .++++++||+.+++|+.++ + +|.+|..|+++.+
T Consensus 378 ~~~~~~~~p~rr~g~~~~~~~~iyv~GG~~~-~-------~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~ 449 (695)
T 2zwa_A 378 QLLECECPINRKFGDVDVAGNDVFYMGGSNP-Y-------RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTIS 449 (695)
T ss_dssp EEEECCCTTCCBSCEEEECSSCEEEECCBSS-S-------BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEET
T ss_pred eEeccCCCCCCceeEEEEECCEEEEECCCCC-C-------CcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEc
Confidence 45556777778887776 999999865 2 5789999999999999987 5 7899999999999
Q ss_pred -CCEEEEEccCCCCC-CCceeEEEeCCCCcEEeccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 -LDKIYAIGGQDCKT-LLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 -~~~iyv~GG~~~~~-~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
+++|||+||..... .++++++||+.+++|+.++++|.+|..|+++++ +++|||+||..... .+++||+.++
T Consensus 450 ~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~ 523 (695)
T 2zwa_A 450 RNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEE 523 (695)
T ss_dssp TTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC------SEEEEETTTT
T ss_pred cCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC------CEEEEECCCC
Confidence 99999999987753 688999999999999999999999999999996 99999999987542 7999999999
Q ss_pred eeEEccc--ccCCcceeEEEEEEe-C-CEEEEEcCCCCCCCCCcccccccceeeEEECCCCc------eEecccC-Cccc
Q psy9754 175 TWTTLAT--KLRYPRYLATLVSVN-N-EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE------WKFVTEL-VVPR 243 (306)
Q Consensus 175 ~W~~~~~--~~~~~~~~~~~~~~~-~-~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~------W~~~~~~-p~~~ 243 (306)
+|+.++. .+|.+|..+++++++ + ++||++||...... ....++++||+.+++ |+.+..+ +.+|
T Consensus 524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~------~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R 597 (695)
T 2zwa_A 524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT------TVSDKAIIFKYDAENATEPITVIKKLQHPLFQR 597 (695)
T ss_dssp EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS------CBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC
T ss_pred ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC------eeeCcEEEEEccCCccccceEEEEcCCCCCCCc
Confidence 9999942 378889988866655 3 78999999854321 135789999999999 8988875 5889
Q ss_pred ccceeeeeC-CEEEEEeCccCccc-cccceEEEeeccccceeccCCCCcc--------cccceeeEEecC
Q psy9754 244 HAHSASVLS-SQILIIGGVTTVYK-RTLKSVECWCFDRQAWIKGVSGLPA--------TILGHSSVALPL 303 (306)
Q Consensus 244 ~~~~~~~~~-~~i~v~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~~p~--------~r~~~~~~~~~~ 303 (306)
..|+++.++ ++||++||.+.... ...+++++||+++++|+. + .+|. .+.+|+++++..
T Consensus 598 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~-~-~~p~~~~~~~~p~~~gh~~~~~~~ 665 (695)
T 2zwa_A 598 YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTS-I-PISRRIWEDHSLMLAGFSLVSTSM 665 (695)
T ss_dssp BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEE-C-CCCHHHHHHSCCCCSSCEEECC--
T ss_pred ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEE-e-eccccccCCCCccceeeeEEEeCC
Confidence 999999998 99999999865321 356899999999999986 2 3432 356788887764
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=2.5e-37 Score=283.22 Aligned_cols=281 Identities=16% Similarity=0.197 Sum_probs=217.1
Q ss_pred ceeEEecccccc-------eeEEEEEEeec--Cceeeecccccccccce--E-------EEEeCccCcCCCCcccceeec
Q psy9754 6 DWELICKEGTEG-------IKLLVIWIMDI--VTYDLSIERVSQRYDVK--I-------NSLAGGVDPSSDEKTTDIVSN 67 (306)
Q Consensus 6 ~~~l~~~gG~~~-------~~~~~~~~~~~--~~W~~~~~~p~~r~~~~--~-------i~v~GG~~~~~~~~~~~~~~~ 67 (306)
+++||++||... .....++.||+ ++|..++.+|.+|..++ + ||++||... .
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----------~ 265 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----------K 265 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----------T
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----------C
Confidence 789999999633 23457899999 89999999988876543 2 999999753 3
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccC-CCCCCCceeEEEeCCCCcEEec-----cCCccccccee
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQ-DCKTLLSSVECYDPVAHTWEDV-----APLKIARMGMA 140 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~-~~~~~~~~~~~~d~~~~~w~~~-----~~~~~~~~~~~ 140 (306)
++++||+.+++|+.+++|+.+|..|+++.+ +++||++||. +.....+++++||+.+++|+.+ .+++..+.. +
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~ 344 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-G 344 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-G
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-c
Confidence 699999999999999999999999999999 9999999994 5456778999999999999997 455555443 5
Q ss_pred eEEECCEEEEEcccCCCCC-CCCCccEEEEeCCCCeeEEcccccCC------cceeEEEEEE--eCCEEEEEcCCCCCCC
Q psy9754 141 VAEINDKIWIAGGYTGDKM-NPVTDKVECYDPRTNTWTTLATKLRY------PRYLATLVSV--NNEKLYIIGGASQTDA 211 (306)
Q Consensus 141 ~~~~~~~iyv~GG~~~~~~-~~~~~~~~~~d~~~~~W~~~~~~~~~------~~~~~~~~~~--~~~~iyi~GG~~~~~~ 211 (306)
++..++++|++||.++... ....+.++.||++++.|.......+. ++..++++++ .+++||++||......
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 6668999999998764321 01157899999999998764222222 2233344442 2499999999753221
Q ss_pred CCcccccccceeeEEECCCCceEecc--cCCcccccceeeee-CCEEEEEeCccCc----cccccceEEEeeccccceec
Q psy9754 212 TNTQKMYSVSDLDVFVSNEKEWKFVT--ELVVPRHAHSASVL-SSQILIIGGVTTV----YKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 212 ~~~~~~~~~~~~~~y~~~~~~W~~~~--~~p~~~~~~~~~~~-~~~i~v~GG~~~~----~~~~~~~~~~yd~~~~~W~~ 284 (306)
. .....+..+++||+.+++|..+. .+|.+|..++++.+ +++||++||.... ....+.++++||+++++|+.
T Consensus 425 ~--~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 425 S--DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp S--BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE
T ss_pred C--CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee
Confidence 1 11112337899999999999886 89999999998888 9999999997632 12456889999999999999
Q ss_pred cCCCCcccccceeeEEe
Q psy9754 285 GVSGLPATILGHSSVAL 301 (306)
Q Consensus 285 ~~~~~p~~r~~~~~~~~ 301 (306)
++.+|.+|..|+++++
T Consensus 503 -~~~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 503 -QNPNSIVRVYHSISLL 518 (656)
T ss_dssp -CCCCSSCCCTTEEEEE
T ss_pred -cCCCCCccccccHhhc
Confidence 7899999999997766
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.5e-32 Score=251.69 Aligned_cols=263 Identities=16% Similarity=0.135 Sum_probs=197.6
Q ss_pred ccceeEEecccccceeEEEEEEeec--CceeeecccccccccceE-------EEEeCccCcCCCCcccceeeceEEEEeC
Q psy9754 4 IWDWELICKEGTEGIKLLVIWIMDI--VTYDLSIERVSQRYDVKI-------NSLAGGVDPSSDEKTTDIVSNSVWSFNP 74 (306)
Q Consensus 4 ~~~~~l~~~gG~~~~~~~~~~~~~~--~~W~~~~~~p~~r~~~~~-------i~v~GG~~~~~~~~~~~~~~~~~~~~d~ 74 (306)
+.+++||++||.... .++.||+ ++|+++++||.+|..|++ |||+||...... ..+++++||+
T Consensus 251 ~~~g~lyv~GG~~~~---~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~------~~~~~e~yd~ 321 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAK---KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV------FEKNGEVYSP 321 (656)
T ss_dssp CTTSCEEEECSSSTT---CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS------CCCCEEEEET
T ss_pred CCCCCEEEeCCCCCC---ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc------ccccceEeCC
Confidence 368999999997554 5889999 789999999999999886 999999543221 5789999999
Q ss_pred CCCCeeeCC-----CCCCCccceeeEEECCEEEEEccCCCC----CCCceeEEEeCCCCcEEeccC-Ccc------cccc
Q psy9754 75 NNKQWTQEP-----NMTYPRKIFSFVSCLDKIYAIGGQDCK----TLLSSVECYDPVAHTWEDVAP-LKI------ARMG 138 (306)
Q Consensus 75 ~t~~W~~~~-----~~~~~~~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~d~~~~~w~~~~~-~~~------~~~~ 138 (306)
.+++|+.++ +++..+.. +++..++++|++||.+.. .....+++||+.+++|..... .+. .+..
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 999999973 45555543 555679999999997654 346789999999999875322 211 1233
Q ss_pred eeeEE---ECCEEEEEcccCCCCCCCCCc---cEEEEeCCCCeeEEcc-cccCCcceeEEEEEEeCCEEEEEcCCCCCCC
Q psy9754 139 MAVAE---INDKIWIAGGYTGDKMNPVTD---KVECYDPRTNTWTTLA-TKLRYPRYLATLVSVNNEKLYIIGGASQTDA 211 (306)
Q Consensus 139 ~~~~~---~~~~iyv~GG~~~~~~~~~~~---~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~ 211 (306)
+.+++ .+++||++||..........+ .+++||+.+++|+.+. ..++.+|..++++.+.+++||++||......
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~ 480 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC
Confidence 34443 489999999975322111234 7899999999999983 4889999999988885599999999753321
Q ss_pred CCcccccccceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCcc-ccccceEEEeecc
Q psy9754 212 TNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVY-KRTLKSVECWCFD 278 (306)
Q Consensus 212 ~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~-~~~~~~~~~yd~~ 278 (306)
.+ ....+.++++||+.+++|+.++.++.+|..|+++.+ +++||++||..... ....-++++|.|.
T Consensus 481 ~~--~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 481 FE--DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp TC--CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECG
T ss_pred cC--CCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCCCCCeeEEEEEeCh
Confidence 10 123457899999999999999999999999998887 99999999964211 1223457777764
No 19
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.56 E-value=0.00022 Score=59.25 Aligned_cols=187 Identities=10% Similarity=0.010 Sum_probs=108.4
Q ss_pred eceEEEEeCCCCCe-eeCCCCCCCccceeeEE-ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc----cccce
Q psy9754 66 SNSVWSFNPNNKQW-TQEPNMTYPRKIFSFVS-CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI----ARMGM 139 (306)
Q Consensus 66 ~~~~~~~d~~t~~W-~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~----~~~~~ 139 (306)
.+.+.++|+.+.+- ..++....| ..++. -++++|+.... ...+.++|+.+++-...-+... ...-.
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~p---~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTSP---RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTE 134 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSSE---EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCC
T ss_pred CCEEEEEECcccEEEEEcCCCCCC---cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcc
Confidence 46799999998876 334322222 23333 57899999742 2678999999987543211111 00222
Q ss_pred eeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccc
Q psy9754 140 AVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 140 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
.++..++++|+..-. ..+.+.++|+++.+..........| ..++...++++|+.......... ....
T Consensus 135 ~i~~~~~~lyv~~~~-------~~~~v~viD~~t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~---~~~~ 201 (328)
T 3dsm_A 135 QMVQYGKYVYVNCWS-------YQNRILKIDTETDKVVDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSP---YGYE 201 (328)
T ss_dssp CEEEETTEEEEEECT-------TCCEEEEEETTTTEEEEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCS---SCBC
T ss_pred eEEEECCEEEEEcCC-------CCCEEEEEECCCCeEEEEEEcCCCc---cceEEcCCCCEEEEECCCccCCc---cccC
Confidence 344478999998420 0367999999998864431222222 23344456898887643211000 0001
Q ss_pred cceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
...++++|+.+.+....-.++....-..++.- ++.+|+..+ .++++|+++++..
T Consensus 202 ~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 202 APSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------DIWRMPVEADRVP 257 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS----------SEEEEETTCSSCC
T ss_pred CceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc----------EEEEEECCCCcee
Confidence 25789999988876644344433223344444 567787643 5889999887763
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.35 E-value=0.0001 Score=57.99 Aligned_cols=156 Identities=14% Similarity=0.028 Sum_probs=103.4
Q ss_pred ceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEe
Q psy9754 91 IFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYD 170 (306)
Q Consensus 91 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d 170 (306)
..++...++.+|+..|... .+.+.++|+.+++-...-+++....+.+++..+++||+.... .+.+.+||
T Consensus 23 tqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~--------~~~v~v~D 91 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR--------NHEGFVYD 91 (243)
T ss_dssp EEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS--------SSEEEEEE
T ss_pred cccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee--------CCEEEEEE
Confidence 3467777899999988654 367889999999977666677666777888899999998532 36899999
Q ss_pred CCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccC---Ccc-cccc
Q psy9754 171 PRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTEL---VVP-RHAH 246 (306)
Q Consensus 171 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~---p~~-~~~~ 246 (306)
+++.+-..-.+. +..+-+++..+ +++|+..|. ..++.+|+++.+-..--+. +.+ +..-
T Consensus 92 ~~tl~~~~ti~~---~~~Gwglt~dg-~~L~vSdgs--------------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 92 LATLTPRARFRY---PGEGWALTSDD-SHLYMSDGT--------------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp TTTTEEEEEEEC---SSCCCEEEECS-SCEEEECSS--------------SEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CCcCcEEEEEeC---CCCceEEeeCC-CEEEEECCC--------------CeEEEEeCCCCeEEEEEEEccCCcccccce
Confidence 998875432122 22333444434 789998763 5689999987664322111 112 1112
Q ss_pred eeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 247 SASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 247 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.+...+++||+---.. +.+.+.|+++++=
T Consensus 154 eLe~~~G~lyanvw~s-------~~I~vIDp~tG~V 182 (243)
T 3mbr_X 154 ELEWVNGELLANVWLT-------SRIARIDPASGKV 182 (243)
T ss_dssp EEEEETTEEEEEETTT-------TEEEEECTTTCBE
T ss_pred eeEEeCCEEEEEECCC-------CeEEEEECCCCCE
Confidence 2334588888543222 6788999988763
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.34 E-value=0.00039 Score=54.66 Aligned_cols=176 Identities=16% Similarity=0.091 Sum_probs=109.1
Q ss_pred EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcE
Q psy9754 47 NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 47 i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w 126 (306)
||+-.|... .+.+.++|+++++=...-+++......+++..+++||+..... ..+++||+.+.+-
T Consensus 33 LyestG~~g----------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 33 LYESTGETG----------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDLATLTP 97 (243)
T ss_dssp EEEEECCTT----------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTTEE
T ss_pred EEEECCCCC----------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEECCcCcE
Confidence 666666543 4688999999998755555555555566777899999995432 6799999988774
Q ss_pred EeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEE-cc-cccCCccee-EEEEEEeCCEEEEE
Q psy9754 127 EDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTT-LA-TKLRYPRYL-ATLVSVNNEKLYII 203 (306)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~-~~~~~~~~~-~~~~~~~~~~iyi~ 203 (306)
. ..++.+..+.+++.-++++|+.-| .+.+..+|+++.+-.. +. ...+.+... ..+...+ ++||+-
T Consensus 98 ~--~ti~~~~~Gwglt~dg~~L~vSdg---------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~-G~lyan 165 (243)
T 3mbr_X 98 R--ARFRYPGEGWALTSDDSHLYMSDG---------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN-GELLAN 165 (243)
T ss_dssp E--EEEECSSCCCEEEECSSCEEEECS---------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET-TEEEEE
T ss_pred E--EEEeCCCCceEEeeCCCEEEEECC---------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC-CEEEEE
Confidence 3 233333456677766788998765 4679999999986432 21 111222111 2233344 898864
Q ss_pred cCCCCCCCCCcccccccceeeEEECCCCceE---ecccCCcc---------cccceeeee--CCEEEEEeCcc
Q psy9754 204 GGASQTDATNTQKMYSVSDLDVFVSNEKEWK---FVTELVVP---------RHAHSASVL--SSQILIIGGVT 262 (306)
Q Consensus 204 GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~---~~~~~p~~---------~~~~~~~~~--~~~i~v~GG~~ 262 (306)
--. ...+.+.|+++.+-. .+..+... -..-+.+.. .+++||.|=..
T Consensus 166 vw~-------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 166 VWL-------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp ETT-------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred ECC-------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 322 267899999887643 43333111 112344444 56888887554
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.33 E-value=0.00037 Score=57.86 Aligned_cols=187 Identities=11% Similarity=0.038 Sum_probs=101.7
Q ss_pred eceEEEEeCCCCCeeeCCCCCC----CccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTY----PRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~----~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~ 141 (306)
...+.++|+.+++-...-+... ...-..++..++++|+..-. ....+.++|+.+++....-+.. ..-..+
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g--~~p~~i 177 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIG--IQPTSL 177 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECS--SCBCCC
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcC--CCccce
Confidence 4678999999887542211111 00122334468899998521 1367899999998865422211 111223
Q ss_pred EE-ECCEEEEEcccCCCCC--CCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccc
Q psy9754 142 AE-INDKIWIAGGYTGDKM--NPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 142 ~~-~~~~iyv~GG~~~~~~--~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~ 217 (306)
+. -++++|+......... ..-.+.++++|+++.+.... -..+....-..++... ++.+|+..+
T Consensus 178 ~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~-~~~~~g~~p~~la~~~d~~~lyv~~~------------ 244 (328)
T 3dsm_A 178 VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ-FKFKLGDWPSEVQLNGTRDTLYWINN------------ 244 (328)
T ss_dssp EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE-EECCTTCCCEEEEECTTSCEEEEESS------------
T ss_pred EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE-EecCCCCCceeEEEecCCCEEEEEcc------------
Confidence 32 3588888763221110 00026899999999886543 2222222222344442 367887643
Q ss_pred cccceeeEEECCCCceEecccCCc-ccccceeeee--CCEEEEEeCccCccccccceEEEeecc
Q psy9754 218 YSVSDLDVFVSNEKEWKFVTELVV-PRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~W~~~~~~p~-~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
.++++|+++.+.......+. ...-.++++- +++||+....+. .....+.+||++
T Consensus 245 ----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y---~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 ----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY---QQQGIVYRYSPQ 301 (328)
T ss_dssp ----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS---SSEEEEEEECTT
T ss_pred ----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc---ccCCEEEEECCC
Confidence 46889998777532222222 1222334442 678999873221 112689999998
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.24 E-value=0.0014 Score=54.36 Aligned_cols=181 Identities=8% Similarity=0.021 Sum_probs=95.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCC--------CccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTY--------PRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIAR 136 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~--------~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~ 136 (306)
..++.+|+.+++-...-+.+. +..-..++.. ++.+|+.+... ...++++|+.+.+-...-+.. ..
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~ 185 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNT-GK 185 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCC-CT
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCC-CC
Confidence 578899998877432211111 1112233333 35677776322 256899999887744322211 11
Q ss_pred cceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccc-cCCcce-eEEEEEEeC-CEEEEEcCCCCCCC
Q psy9754 137 MGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATK-LRYPRY-LATLVSVNN-EKLYIIGGASQTDA 211 (306)
Q Consensus 137 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~~~~-~~~~~~~~~-~~iyi~GG~~~~~~ 211 (306)
....++.. ++.+|+... .+.+.++|+.+.+-...... ...+.. ...++...+ +.+|+.....
T Consensus 186 ~~~~~~~s~dg~~l~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 252 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNA---------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---- 252 (353)
T ss_dssp TCCCCEEETTTTEEEEECT---------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS----
T ss_pred ccceEEECCCCCEEEEEcC---------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC----
Confidence 11222232 456777643 25788999988864332111 111122 223333333 4576664321
Q ss_pred CCcccccccceeeEEECCCCceEecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 212 TNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 212 ~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+.+||+.+.+....-..+.+ ..++.. ++ .+|+..... ..+.+||+++++-..
T Consensus 253 ---------~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 253 ---------AEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQA-------GKVSVIDAKSYKVVK 308 (353)
T ss_dssp ---------SEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTT-------TEEEEEETTTTEEEE
T ss_pred ---------CEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCC-------CeEEEEECCCCeEEE
Confidence 5689999987775543333332 223333 44 577776544 578899998876543
No 24
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.24 E-value=0.00046 Score=54.75 Aligned_cols=167 Identities=9% Similarity=0.016 Sum_probs=100.5
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEEC
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIN 145 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~ 145 (306)
.+.+.++|+++++-...-+++......+++..+++||+....+ +.+++||+.+.+-. ..++.+..+.+++.-+
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~t~~~~--~ti~~~~eG~glt~dg 136 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIRNLRQV--RSFNYDGEGWGLTHND 136 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTCCEE--EEEECSSCCCCEEECS
T ss_pred CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECccCcEE--EEEECCCCceEEecCC
Confidence 4688999999998654444444334455777799999995432 67899999887743 2233333556666667
Q ss_pred CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEE-cc-cccCCccee-EEEEEEeCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 146 DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTT-LA-TKLRYPRYL-ATLVSVNNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 146 ~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~-~~~~~~~~~-~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
+++|+.-| .+.+..+|+++.+-.. +. .....+... ..+... +++||+---. ...
T Consensus 137 ~~L~~SdG---------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~-------------~~~ 193 (262)
T 3nol_A 137 QYLIMSDG---------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ-------------TNK 193 (262)
T ss_dssp SCEEECCS---------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-------------SSE
T ss_pred CEEEEECC---------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc-------------CCe
Confidence 78888654 3679999999876433 21 111111111 123334 4899864322 267
Q ss_pred eeEEECCCCceE---ecccCCcc--------cccceeeee--CCEEEEEeCcc
Q psy9754 223 LDVFVSNEKEWK---FVTELVVP--------RHAHSASVL--SSQILIIGGVT 262 (306)
Q Consensus 223 ~~~y~~~~~~W~---~~~~~p~~--------~~~~~~~~~--~~~i~v~GG~~ 262 (306)
+.+.|+++.+-. .++.+... -...+.+.. .+++||.|-..
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 899999988744 33322111 122344444 56788887555
No 25
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.23 E-value=0.00029 Score=59.66 Aligned_cols=178 Identities=11% Similarity=0.063 Sum_probs=92.8
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
...+..+|+.+++....-..+. .-..++.. ++ .||+.+..+ ..+.++|+.+++....-.... .-..++.
T Consensus 53 d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~~--~~~~~~~ 123 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTGK--SPLGLAL 123 (391)
T ss_dssp GTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS--SEEEEEE
T ss_pred CCeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCCC--CcceEEE
Confidence 3578889998876543322222 22233333 33 566665432 568899999887543322211 1123333
Q ss_pred E--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCccccccc
Q psy9754 144 I--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 ~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
. +..+|+.++. .+.+..+|+.+.+.... .... ..-..++...++ .||+.++..
T Consensus 124 s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~-~~~~--~~~~~~~~~~dg~~l~~~~~~~------------- 179 (391)
T 1l0q_A 124 SPDGKKLYVTNNG--------DKTVSVINTVTKAVINT-VSVG--RSPKGIAVTPDGTKVYVANFDS------------- 179 (391)
T ss_dssp CTTSSEEEEEETT--------TTEEEEEETTTTEEEEE-EECC--SSEEEEEECTTSSEEEEEETTT-------------
T ss_pred CCCCCEEEEEeCC--------CCEEEEEECCCCcEEEE-EecC--CCcceEEECCCCCEEEEEeCCC-------------
Confidence 2 3467776642 25789999988876544 2111 111233333334 566665543
Q ss_pred ceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+....... .....+++.. +++.+++++... ....+.+||+++.+-
T Consensus 180 ~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~----~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDK----YFNTVSMIDTGTNKI 236 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECS----SCCEEEEEETTTTEE
T ss_pred CEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCc----CCCcEEEEECCCCeE
Confidence 5689999987764433221 1111222222 554444443210 115788999887654
No 26
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.21 E-value=0.0011 Score=53.07 Aligned_cols=187 Identities=11% Similarity=-0.043 Sum_probs=110.1
Q ss_pred EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcE
Q psy9754 47 NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 47 i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w 126 (306)
||+..|... .+.+..+|+.+++=...-+++.......++..++.||+..-. ...+.++|+.+.+-
T Consensus 34 Lyvstg~~~----------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t~~v 98 (266)
T 2iwa_A 34 LFESTGLYG----------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEECSTT----------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTTTEE
T ss_pred EEEECCCCC----------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCCCcE
Confidence 777666432 478999999998854433333333344566678899999642 26789999997763
Q ss_pred EeccCCccc-ccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE-Ecc-cccCCcce-eEEEEEEeCCEEEE
Q psy9754 127 EDVAPLKIA-RMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT-TLA-TKLRYPRY-LATLVSVNNEKLYI 202 (306)
Q Consensus 127 ~~~~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~-~~~~~~~~-~~~~~~~~~~~iyi 202 (306)
. ..++.. ..+.+++.-++++|+..| .+.+..+|+++.+-. .+. ...+.+.. -..+... ++++|+
T Consensus 99 ~--~~i~~g~~~g~glt~Dg~~l~vs~g---------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyv 166 (266)
T 2iwa_A 99 I--KNFTHQMKDGWGLATDGKILYGSDG---------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWA 166 (266)
T ss_dssp E--EEEECCSSSCCEEEECSSSEEEECS---------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred E--EEEECCCCCeEEEEECCCEEEEECC---------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEE
Confidence 2 222222 334445555678888654 468999999987643 221 11111211 1123333 489987
Q ss_pred EcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcc------------cccceeeee--CCEEEEEeCccCccccc
Q psy9754 203 IGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVP------------RHAHSASVL--SSQILIIGGVTTVYKRT 268 (306)
Q Consensus 203 ~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~------------~~~~~~~~~--~~~i~v~GG~~~~~~~~ 268 (306)
--... ..+.+.|+++.+-...-.++.. -.-.+++.. ++++||.|+..
T Consensus 167 n~~~~-------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~------ 227 (266)
T 2iwa_A 167 NIWQT-------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW------ 227 (266)
T ss_dssp EETTS-------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC------
T ss_pred ecCCC-------------CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC------
Confidence 64332 6789999988764322222100 112344544 45899998877
Q ss_pred cceEEEeecccc
Q psy9754 269 LKSVECWCFDRQ 280 (306)
Q Consensus 269 ~~~~~~yd~~~~ 280 (306)
.++++.++...
T Consensus 228 -~~v~~i~l~~~ 238 (266)
T 2iwa_A 228 -PKLFEIKLHLV 238 (266)
T ss_dssp -SEEEEEEEEEC
T ss_pred -CeEEEEEEecc
Confidence 46777776553
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.09 E-value=0.00014 Score=57.79 Aligned_cols=155 Identities=12% Similarity=-0.068 Sum_probs=99.3
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
.++...++.+|+..|... .+.+.++|+.+++-..--+++....+.+++..+++||+.... .+.+.+||+
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~--------~~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK--------NGLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS--------SSEEEEEET
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee--------CCEEEEEEC
Confidence 345555899999988654 267889999999866555566555666778889999998542 368999999
Q ss_pred CCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc-ccccc---e
Q psy9754 172 RTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-PRHAH---S 247 (306)
Q Consensus 172 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-~~~~~---~ 247 (306)
++.+-..-.+.. ..+.+.+..+ +++|+..|. ..++.+|+++.+-..--+... ++... .
T Consensus 115 ~t~~~~~ti~~~---~eG~glt~dg-~~L~~SdGs--------------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNE 176 (262)
T 3nol_A 115 RNLRQVRSFNYD---GEGWGLTHND-QYLIMSDGT--------------PVLRFLDPESLTPVRTITVTAHGEELPELNE 176 (262)
T ss_dssp TTCCEEEEEECS---SCCCCEEECS-SCEEECCSS--------------SEEEEECTTTCSEEEEEECEETTEECCCEEE
T ss_pred ccCcEEEEEECC---CCceEEecCC-CEEEEECCC--------------CeEEEEcCCCCeEEEEEEeccCCccccccce
Confidence 988753321222 2333344333 788887663 568999998766442222211 11111 2
Q ss_pred eeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 248 ASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 248 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+...+++||+---.. +.+.+.|+++++=
T Consensus 177 Le~~~G~lyan~w~~-------~~I~vIDp~tG~V 204 (262)
T 3nol_A 177 LEWVDGEIFANVWQT-------NKIVRIDPETGKV 204 (262)
T ss_dssp EEEETTEEEEEETTS-------SEEEEECTTTCBE
T ss_pred eEEECCEEEEEEccC-------CeEEEEECCCCcE
Confidence 344588888643222 6888999988764
No 28
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.06 E-value=0.00054 Score=57.95 Aligned_cols=177 Identities=8% Similarity=0.086 Sum_probs=92.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+..||+.+++-..... .......++.. ++ .+|+.++.+ ..+.++|..+++....-..... -..++..
T Consensus 96 ~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~ 166 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVGRS--PKGIAVT 166 (391)
T ss_dssp TEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECCSS--EEEEEEC
T ss_pred CEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecCCC--cceEEEC
Confidence 578999999876543322 11222333333 33 576776533 5788999988875443222111 1222222
Q ss_pred --CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 145 --NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 145 --~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
++.||+.++.. +.+..+|+.+.+.... ... ......++...+++.+++++.... ...
T Consensus 167 ~dg~~l~~~~~~~--------~~v~~~d~~~~~~~~~-~~~--~~~~~~~~~~~~g~~l~~~~~~~~----------~~~ 225 (391)
T 1l0q_A 167 PDGTKVYVANFDS--------MSISVIDTVTNSVIDT-VKV--EAAPSGIAVNPEGTKAYVTNVDKY----------FNT 225 (391)
T ss_dssp TTSSEEEEEETTT--------TEEEEEETTTTEEEEE-EEC--SSEEEEEEECTTSSEEEEEEECSS----------CCE
T ss_pred CCCCEEEEEeCCC--------CEEEEEECCCCeEEEE-Eec--CCCccceEECCCCCEEEEEecCcC----------CCc
Confidence 34677765422 5689999988875544 211 112122333334544444332111 156
Q ss_pred eeEEECCCCceEecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccce
Q psy9754 223 LDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+.+||+.+.+-. ..++....-..++.. ++ .||+.++.+ ..+.+||+++++-
T Consensus 226 v~~~d~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~s~~~d-------~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 226 VSMIDTGTNKIT--ARIPVGPDPAGIAVTPDGKKVYVALSFX-------NTVSVIDTATNTI 278 (391)
T ss_dssp EEEEETTTTEEE--EEEECCSSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEE
T ss_pred EEEEECCCCeEE--EEEecCCCccEEEEccCCCEEEEEcCCC-------CEEEEEECCCCcE
Confidence 899998876533 222222222223332 44 566766555 5788999887654
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.99 E-value=0.0054 Score=51.63 Aligned_cols=172 Identities=10% Similarity=0.181 Sum_probs=100.5
Q ss_pred ceEEEEeCCCCC--eeeCCCCCC--CccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccc----
Q psy9754 67 NSVWSFNPNNKQ--WTQEPNMTY--PRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIAR---- 136 (306)
Q Consensus 67 ~~~~~~d~~t~~--W~~~~~~~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~---- 136 (306)
..++.||+.+++ |+.-...+. .+.....+..++.||+... ...+..+|+.+++ |+.-...+...
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 226 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTEID 226 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT------TTEEEEEETTTCCEEEEEECCC--------
T ss_pred CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcccc
Confidence 578999998876 865433221 1222344555788777422 1468889998775 76543222111
Q ss_pred ----cceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCC
Q psy9754 137 ----MGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTD 210 (306)
Q Consensus 137 ----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~ 210 (306)
.....+..++.+|+.+. ...+.++|+++.+ |+.- .. . ....+. .++.||+....
T Consensus 227 ~~~~~~~~p~~~~~~v~~~~~---------~g~l~~~d~~tG~~~w~~~-~~----~-~~~~~~-~~~~l~~~~~~---- 286 (376)
T 3q7m_A 227 RLSDVDTTPVVVNGVVFALAY---------NGNLTALDLRSGQIMWKRE-LG----S-VNDFIV-DGNRIYLVDQN---- 286 (376)
T ss_dssp ---CCCCCCEEETTEEEEECT---------TSCEEEEETTTCCEEEEEC-CC----C-EEEEEE-ETTEEEEEETT----
T ss_pred cccccCCCcEEECCEEEEEec---------CcEEEEEECCCCcEEeecc-CC----C-CCCceE-ECCEEEEEcCC----
Confidence 12333456888888652 2578999988764 7654 11 1 123333 34899887532
Q ss_pred CCCcccccccceeeEEECCCCc--eEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccc--eec
Q psy9754 211 ATNTQKMYSVSDLDVFVSNEKE--WKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQA--WIK 284 (306)
Q Consensus 211 ~~~~~~~~~~~~~~~y~~~~~~--W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~--W~~ 284 (306)
..++.+|+.+.+ |+.-. + ......+.+..++.||+... . ..++++|+++++ |+.
T Consensus 287 ----------g~l~~~d~~tG~~~w~~~~-~-~~~~~~~~~~~~~~l~v~~~-~-------g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 287 ----------DRVMALTIDGGVTLWTQSD-L-LHRLLTSPVLYNGNLVVGDS-E-------GYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp ----------CCEEEEETTTCCEEEEECT-T-TTSCCCCCEEETTEEEEECT-T-------SEEEEEETTTCCEEEEE
T ss_pred ----------CeEEEEECCCCcEEEeecc-c-CCCcccCCEEECCEEEEEeC-C-------CeEEEEECCCCcEEEEE
Confidence 457899988765 65421 1 12233445556888887642 2 468899988766 644
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.90 E-value=0.0035 Score=51.68 Aligned_cols=177 Identities=10% Similarity=0.110 Sum_probs=90.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~ 144 (306)
..+..+|..+++-...-...... ...++.. +++.++.|+.+ ..+.+||..+.+-...-... ...-..++. -
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~~-~~~v~~~~~sp 174 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVD-AWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDTR-GKFILSIAYSP 174 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC-CCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEECS-SSCEEEEEECT
T ss_pred CcEEEEECCCCCEEEEEeCCCcc-EEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecCC-CceEEEEEECC
Confidence 46778888876542211111111 1122222 56666666643 45777888776532211111 111112222 2
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++++++.|+.+ +.+..||+.+.+-.........+- .++....++.+++.|+.. ..+.
T Consensus 175 dg~~lasg~~d--------g~i~iwd~~~~~~~~~~~~h~~~v--~~l~~spd~~~l~s~s~d-------------g~i~ 231 (321)
T 3ow8_A 175 DGKYLASGAID--------GIINIFDIATGKLLHTLEGHAMPI--RSLTFSPDSQLLVTASDD-------------GYIK 231 (321)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSSCC--CEEEECTTSCEEEEECTT-------------SCEE
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcEEEEEcccCCce--eEEEEcCCCCEEEEEcCC-------------CeEE
Confidence 55666666533 468899998876433212111111 133344457777777754 4578
Q ss_pred EEECCCCceEecccCCcccccc-eeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 225 VFVSNEKEWKFVTELVVPRHAH-SASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+||+.+...... +....... +++.. ++..++.|+.+ ..+.+||+.+.+-
T Consensus 232 iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-------~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 232 IYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSD-------KSVKVWDVGTRTC 282 (321)
T ss_dssp EEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEE
T ss_pred EEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCEE
Confidence 899876654321 11111111 22222 67777788776 5788999877654
No 31
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.87 E-value=0.0033 Score=49.94 Aligned_cols=136 Identities=12% Similarity=0.017 Sum_probs=85.7
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCE
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDK 147 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~ 147 (306)
.+.++|+++++-...- ++......+++..+++||+....+ ..+++||+.+.+-.. .++.+..+.+++.-+++
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~Tl~~~~--ti~~~~eGwGLt~Dg~~ 147 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMPPQRER--TTRYSGEGWGLCYWNGK 147 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTTTEEEE--EEECSSCCCCEEEETTE
T ss_pred EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCcCcEEE--EEeCCCceeEEecCCCE
Confidence 3889999998753333 443333445677789999995432 678999999877432 22333445677777889
Q ss_pred EEEEcccCCCCCCCCCccEEEEeCCCCeeEE-cc-cccCCccee-EEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 148 IWIAGGYTGDKMNPVTDKVECYDPRTNTWTT-LA-TKLRYPRYL-ATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 148 iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~-~~~~~~~~~-~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
+|+.-| .+.+..+|+++.+-.. +. ...+.+... ..+... +++||+---. ...+.
T Consensus 148 L~vSdG---------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~-------------s~~I~ 204 (268)
T 3nok_A 148 LVRSDG---------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH-------------SSDVL 204 (268)
T ss_dssp EEEECS---------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-------------CSEEE
T ss_pred EEEECC---------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC-------------CCeEE
Confidence 999865 4689999999987433 21 111112111 123333 4898863221 26789
Q ss_pred EEECCCCceE
Q psy9754 225 VFVSNEKEWK 234 (306)
Q Consensus 225 ~y~~~~~~W~ 234 (306)
+.|+++.+-.
T Consensus 205 vIDp~TG~V~ 214 (268)
T 3nok_A 205 EIDPATGTVV 214 (268)
T ss_dssp EECTTTCBEE
T ss_pred EEeCCCCcEE
Confidence 9999888643
No 32
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.85 E-value=0.0041 Score=53.22 Aligned_cols=184 Identities=10% Similarity=0.058 Sum_probs=95.4
Q ss_pred ceEEEEeCCCCCeeeCCCCC---CCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCccccccee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT---YPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMA 140 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~---~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~ 140 (306)
..+..+|+.+++.....+.. ........+.. ++.+++.++.+ ..+.+||..+.+... +.. ....-..
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~--~~~~~~~ 216 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL--TGKWSKI 216 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC--SSSSEEE
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcC--CCCCeeE
Confidence 45889999988765543321 11111122223 67888887643 568889998766432 221 1111122
Q ss_pred eEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 141 VAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 141 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
++.. ++.+|+.+..+ +.+.++|+.+.+.... ... ...-..++...+++.+++++....... .
T Consensus 217 ~~~~~~~~~l~~~~~~~--------~~i~~~d~~~~~~~~~-~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~-----~ 280 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWIS--------EDISVIDRKTKLEIRK-TDK--IGLPRGLLLSKDGKELYIAQFSASNQE-----S 280 (433)
T ss_dssp EEEETTTTEEEEEETTT--------TEEEEEETTTTEEEEE-CCC--CSEEEEEEECTTSSEEEEEEEESCTTC-----S
T ss_pred EEEcCCCCEEEEEecCC--------CcEEEEECCCCcEEEE-ecC--CCCceEEEEcCCCCEEEEEECCCCccc-----c
Confidence 2222 45677765422 5789999988876443 211 112223333334544444443211000 0
Q ss_pred ccceeeEEECCCCceEecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccce
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.-..+.+||+.+.+-......+. ....++.. ++ .+|+.++.+ ..+.+||+++++-
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-------~~v~v~d~~~~~~ 337 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-------SKIEVYDLKEKKV 337 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-------TEEEEEETTTTEE
T ss_pred CCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-------CEEEEEECCCCcE
Confidence 01578899998775433221111 11122222 44 677777665 5788999987654
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.84 E-value=0.0063 Score=49.58 Aligned_cols=178 Identities=10% Similarity=0.059 Sum_probs=87.9
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~- 143 (306)
..+..||..+++-...-...... -.++... ++.+++.|+.+ ..+.+||..+++-.. +.....+. ..++.
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~ 158 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKTLPAHSDPV--SAVHFN 158 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC-EEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEEECCCSSCE--EEEEEC
T ss_pred CEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEEecCCCCcE--EEEEEc
Confidence 46778888776532211001111 1122222 45666666654 357788988765322 22111111 11122
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
-++.+++.|+.+ +.+..||+.+.+............. ..+....+++.++.++.. ..+
T Consensus 159 ~~~~~l~~~~~d--------~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d-------------~~i 216 (312)
T 4ery_A 159 RDGSLIVSSSYD--------GLCRIWDTASGQCLKTLIDDDNPPV-SFVKFSPNGKYILAATLD-------------NTL 216 (312)
T ss_dssp TTSSEEEEEETT--------SCEEEEETTTCCEEEEECCSSCCCE-EEEEECTTSSEEEEEETT-------------TEE
T ss_pred CCCCEEEEEeCC--------CcEEEEECCCCceeeEEeccCCCce-EEEEECCCCCEEEEEcCC-------------CeE
Confidence 245666666543 4688999887764332011111111 123333346666666543 567
Q ss_pred eEEECCCCceEecccCCcc-cccce-eee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 224 DVFVSNEKEWKFVTELVVP-RHAHS-ASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~-~~~~~-~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+||+.+.+-...-..... ..... ... .++.+++.|+.+ ..+.+||+++++
T Consensus 217 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~~~ 270 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-------NLVYIWNLQTKE 270 (312)
T ss_dssp EEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-------SCEEEEETTTCC
T ss_pred EEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-------CEEEEEECCCch
Confidence 8899877653322111111 11111 112 266777788776 578899987765
No 34
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.80 E-value=0.0015 Score=51.83 Aligned_cols=152 Identities=8% Similarity=-0.118 Sum_probs=96.3
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
.++...++.+|+..|... .+.++|+.+++-..-- ++....+.+++..+++||+.... .+.+.+||+
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~--------~~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT--------EGLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS--------SCEEEEEET
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc--------CCEEEEEEC
Confidence 455556899999998654 2888999998854333 55555556677889999998542 368999999
Q ss_pred CCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccC---Cccc-ccce
Q psy9754 172 RTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTEL---VVPR-HAHS 247 (306)
Q Consensus 172 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~---p~~~-~~~~ 247 (306)
++.+-..-.+..+ .+.+++..+ ++||+..|. ..++.+|+++.+-..--+. +.+. ..-.
T Consensus 124 ~Tl~~~~ti~~~~---eGwGLt~Dg-~~L~vSdGs--------------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 124 MPPQRERTTRYSG---EGWGLCYWN-GKLVRSDGG--------------TMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp TTTEEEEEEECSS---CCCCEEEET-TEEEEECSS--------------SEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred CcCcEEEEEeCCC---ceeEEecCC-CEEEEECCC--------------CEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 9887543213222 223444444 889998763 5789999987664422111 1111 1112
Q ss_pred eeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 248 ASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 248 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+...+++||+---.. +.+.+.|+++++=
T Consensus 186 Le~~dG~lyanvw~s-------~~I~vIDp~TG~V 213 (268)
T 3nok_A 186 LECANGVIYANIWHS-------SDVLEIDPATGTV 213 (268)
T ss_dssp EEEETTEEEEEETTC-------SEEEEECTTTCBE
T ss_pred cEEeCCEEEEEECCC-------CeEEEEeCCCCcE
Confidence 334488888543222 6788999988763
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.80 E-value=0.0045 Score=51.61 Aligned_cols=180 Identities=9% Similarity=0.042 Sum_probs=85.3
Q ss_pred ceEEEEeCCCCCeeeCCCCC-CCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCccc--ccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT-YPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIA--RMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~-~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~--~~~~~~ 141 (306)
..+..||..++++.....+. ......++... +++.++.|+.+ ..+.+||..+.. |......... ..-..+
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 45777888777765432221 12222222222 56666666644 335556665543 3222222111 111122
Q ss_pred EEE-CCEEEEEcccCCCCCCCCCccEEEEeCCC------------------Cee-EEcccccCCcceeEEEEEEeCCEEE
Q psy9754 142 AEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRT------------------NTW-TTLATKLRYPRYLATLVSVNNEKLY 201 (306)
Q Consensus 142 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~------------------~~W-~~~~~~~~~~~~~~~~~~~~~~~iy 201 (306)
+.. ++.+++.|+.+ +.+..||... ..- ..+ .. ....-.++....++..+
T Consensus 149 ~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 149 DWHPNSVLLAAGSCD--------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SS--SCGWVHGVCFSANGSRV 217 (372)
T ss_dssp EECTTSSEEEEEETT--------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CC--CSSCEEEEEECSSSSEE
T ss_pred EEcCCCCEEEEEcCC--------CCEEEEEcccccccccccccccccccchhhheEec-CC--CCCeEEEEEECCCCCEE
Confidence 222 45566666533 4577888542 111 111 11 11111233333346666
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccc-
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDR- 279 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~- 279 (306)
+.++.. ..+.+||+.+.+-...-...... ..+++. -++.+++.| .+ ..+.+|+..+
T Consensus 218 ~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~-~d-------~~i~i~~~~~~ 275 (372)
T 1k8k_C 218 AWVSHD-------------STVCLADADKKMAVATLASETLP-LLAVTFITESSLVAAG-HD-------CFPVLFTYDSA 275 (372)
T ss_dssp EEEETT-------------TEEEEEEGGGTTEEEEEECSSCC-EEEEEEEETTEEEEEE-TT-------SSCEEEEEETT
T ss_pred EEEeCC-------------CEEEEEECCCCceeEEEccCCCC-eEEEEEecCCCEEEEE-eC-------CeEEEEEccCc
Confidence 666543 56788998766533221111111 122222 367766665 44 4678999888
Q ss_pred -cceec
Q psy9754 280 -QAWIK 284 (306)
Q Consensus 280 -~~W~~ 284 (306)
++|..
T Consensus 276 ~~~~~~ 281 (372)
T 1k8k_C 276 AGKLSF 281 (372)
T ss_dssp TTEEEE
T ss_pred CceEEE
Confidence 88865
No 36
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.78 E-value=0.012 Score=49.37 Aligned_cols=155 Identities=14% Similarity=0.136 Sum_probs=89.5
Q ss_pred ceEEEEeCCCCC--eeeCCCCCCCc--------cceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcc
Q psy9754 67 NSVWSFNPNNKQ--WTQEPNMTYPR--------KIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKI 134 (306)
Q Consensus 67 ~~~~~~d~~t~~--W~~~~~~~~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~ 134 (306)
..++.+|+.+++ |+.-...+... .....+..++.||+.+. ...+..+|+.+++ |+.-.. .
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~~--~ 269 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTALDLRSGQIMWKRELG--S 269 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEEETTTCCEEEEECCC--C
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEEECCCCcEEeeccCC--C
Confidence 468899998775 76543222111 22344556889988753 1458889998775 664321 1
Q ss_pred cccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 135 ARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 135 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
....+..++.||+... ...+.++|+++.+ |+.- . ... +...+.+..+ +.||+....
T Consensus 270 ---~~~~~~~~~~l~~~~~---------~g~l~~~d~~tG~~~w~~~-~-~~~-~~~~~~~~~~-~~l~v~~~~------ 327 (376)
T 3q7m_A 270 ---VNDFIVDGNRIYLVDQ---------NDRVMALTIDGGVTLWTQS-D-LLH-RLLTSPVLYN-GNLVVGDSE------ 327 (376)
T ss_dssp ---EEEEEEETTEEEEEET---------TCCEEEEETTTCCEEEEEC-T-TTT-SCCCCCEEET-TEEEEECTT------
T ss_pred ---CCCceEECCEEEEEcC---------CCeEEEEECCCCcEEEeec-c-cCC-CcccCCEEEC-CEEEEEeCC------
Confidence 2234556889998753 2578999988776 7654 1 111 1112233344 888876421
Q ss_pred CcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEe
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIG 259 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~G 259 (306)
..++++|+.+.+-.....++........+..++.||+..
T Consensus 328 --------g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 328 --------GYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp --------SEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEB
T ss_pred --------CeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEe
Confidence 458899998776322222222233344555688888764
No 37
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.77 E-value=0.0042 Score=49.67 Aligned_cols=155 Identities=14% Similarity=0.040 Sum_probs=94.8
Q ss_pred eeeEEEC-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEe
Q psy9754 92 FSFVSCL-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYD 170 (306)
Q Consensus 92 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d 170 (306)
++++..+ +.+|+..|... .+.+.++|+.+++-...-+++......+.+..+++||+..-. .+.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~--------~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL--------KNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT--------CSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec--------CCEEEEEE
Confidence 4555554 89999977432 277999999999865543344444445677778999998531 36899999
Q ss_pred CCCCeeE-EcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccC---Cccc-cc
Q psy9754 171 PRTNTWT-TLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTEL---VVPR-HA 245 (306)
Q Consensus 171 ~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~---p~~~-~~ 245 (306)
+++.+-. ++ +.. .+ .+.+.+. ..+++|+..|. ..+..+|+++.+-...-+. +.+. .-
T Consensus 93 ~~t~~v~~~i-~~g-~~-~g~glt~-Dg~~l~vs~gs--------------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 93 RRTLSNIKNF-THQ-MK-DGWGLAT-DGKILYGSDGT--------------SILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp TTTTEEEEEE-ECC-SS-SCCEEEE-CSSSEEEECSS--------------SEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CCCCcEEEEE-ECC-CC-CeEEEEE-CCCEEEEECCC--------------CeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 9987643 23 211 11 2223333 33788887642 5789999987653322111 1111 11
Q ss_pred ceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 246 HSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 246 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+...++++|+--... +++.+.|+++++=
T Consensus 155 nele~~dg~lyvn~~~~-------~~V~vID~~tg~V 184 (266)
T 2iwa_A 155 NELEYINGEVWANIWQT-------DCIARISAKDGTL 184 (266)
T ss_dssp EEEEEETTEEEEEETTS-------SEEEEEETTTCCE
T ss_pred eeEEEECCEEEEecCCC-------CeEEEEECCCCcE
Confidence 23334488888764333 6788999988763
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.73 E-value=0.0051 Score=51.28 Aligned_cols=184 Identities=13% Similarity=0.170 Sum_probs=91.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCcc-ceeeEEE-C--CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRK-IFSFVSC-L--DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~ 141 (306)
..+..||..+++|..+..+..... ..+++.. + +.+++.|+.+ ..+.+||..+..-.....+. ....-..+
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 457778888887765544332222 2222222 3 5566666644 45777888766321111111 11111112
Q ss_pred EEE--------------CCEEEEEcccCCCCCCCCCccEEEEeCCCC--eeEEcccccCCcc-eeEEEEEEeC---CEEE
Q psy9754 142 AEI--------------NDKIWIAGGYTGDKMNPVTDKVECYDPRTN--TWTTLATKLRYPR-YLATLVSVNN---EKLY 201 (306)
Q Consensus 142 ~~~--------------~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~-~~~~~~~~~~---~~iy 201 (306)
+.. ++.+++.|+.+ ..+..||..+. .+... ..+.... .-.+++...+ +.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLE-STLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp EECCCC----------CTTCEEEEEETT--------SCEEEEEEETTTTEEEEE-EEECCCSSCEEEEEECCCCSSSEEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCC--------CeEEEEEecCCCcceeeE-EEEecccCcEeEEEECCCCCCCCeE
Confidence 222 35666666543 45777776544 34443 2221111 1223334444 5777
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCCce----EecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEee
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEKEW----KFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWC 276 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W----~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd 276 (306)
+.++.. ..+.+||+.+... ...........-.+++. -++..+++++.+ ..+.+|+
T Consensus 225 ~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-------g~i~iw~ 284 (379)
T 3jrp_A 225 ASVSQD-------------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-------NKVTLWK 284 (379)
T ss_dssp EEEETT-------------SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS-------SSEEEEE
T ss_pred EEEeCC-------------CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC-------CcEEEEe
Confidence 777654 4578888876531 11111111111122222 277777777766 4688888
Q ss_pred cc-ccceec
Q psy9754 277 FD-RQAWIK 284 (306)
Q Consensus 277 ~~-~~~W~~ 284 (306)
.. ..+|..
T Consensus 285 ~~~~~~~~~ 293 (379)
T 3jrp_A 285 ENLEGKWEP 293 (379)
T ss_dssp EEETTEEEE
T ss_pred CCCCCcccc
Confidence 86 456755
No 39
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.69 E-value=0.015 Score=47.68 Aligned_cols=184 Identities=9% Similarity=0.075 Sum_probs=84.4
Q ss_pred eEEEEe--CCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCcccccceeeE
Q psy9754 68 SVWSFN--PNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIARMGMAVA 142 (306)
Q Consensus 68 ~~~~~d--~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~~~~~~~~ 142 (306)
.+..|+ +.+++++.+..++....-..++.. ++ .||+.+..+ ..+.+||...+. .+.+........-..++
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 135 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGCHSAN 135 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTBCCCE
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCceEEE
Confidence 444544 447777665444332222233333 44 466654322 457777774322 22222222211222233
Q ss_pred EE--CCEEEEEcccCCCCCCCCCccEEEEeCCC-CeeEEcc---cccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCcc
Q psy9754 143 EI--NDKIWIAGGYTGDKMNPVTDKVECYDPRT-NTWTTLA---TKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQ 215 (306)
Q Consensus 143 ~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~---~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~ 215 (306)
.. ++.||+.+.. .+.+.+||+.+ .+...+. ...+....-..++...+++ +|+.+...
T Consensus 136 ~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-------- 199 (343)
T 1ri6_A 136 ISPDNRTLWVPALK--------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-------- 199 (343)
T ss_dssp ECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT--------
T ss_pred ECCCCCEEEEecCC--------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC--------
Confidence 32 3467776522 25688999887 6555331 1111111112233333454 66665332
Q ss_pred cccccceeeEEECC--CCceEe---cccCCcc---cccc-eeeee-CC-EEEEEeCccCccccccceEEEeecc--ccce
Q psy9754 216 KMYSVSDLDVFVSN--EKEWKF---VTELVVP---RHAH-SASVL-SS-QILIIGGVTTVYKRTLKSVECWCFD--RQAW 282 (306)
Q Consensus 216 ~~~~~~~~~~y~~~--~~~W~~---~~~~p~~---~~~~-~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~--~~~W 282 (306)
..+.+|+++ +.+++. +..++.. .... .++.- ++ .||+.+..+ ..+.+||++ ++++
T Consensus 200 -----~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-------~~i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 200 -----SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-------SLITVFSVSEDGSVL 267 (343)
T ss_dssp -----TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTSCCE
T ss_pred -----CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-------CEEEEEEEcCCCCce
Confidence 467888884 344432 2223322 1111 23332 44 566555433 568888887 4444
Q ss_pred ec
Q psy9754 283 IK 284 (306)
Q Consensus 283 ~~ 284 (306)
+.
T Consensus 268 ~~ 269 (343)
T 1ri6_A 268 SK 269 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 40
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.67 E-value=0.021 Score=48.88 Aligned_cols=185 Identities=6% Similarity=-0.084 Sum_probs=102.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~- 143 (306)
..++.+|+.+++...+...+. ...+++.. ++ .|++.+..+. ...++++|..+++..++....... ...+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~~~--~~~~~s 275 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGRSNN--TEPTWF 275 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCSSCE--EEEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCCCcc--cceEEC
Confidence 589999999988766543322 22233333 45 4554544332 257999999988876665432211 11222
Q ss_pred ECCE-EEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 144 INDK-IWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 144 ~~~~-iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
-+++ |++.+... . ...++.+|+.+..-..+ ... ...........+++.+++++.... ...
T Consensus 276 pdg~~l~~~s~~~-g-----~~~i~~~d~~~~~~~~l-~~~--~~~~~~~~~spdG~~l~~~~~~~g----------~~~ 336 (415)
T 2hqs_A 276 PDSQNLAFTSDQA-G-----RPQVYKVNINGGAPQRI-TWE--GSQNQDADVSSDGKFMVMVSSNGG----------QQH 336 (415)
T ss_dssp TTSSEEEEEECTT-S-----SCEEEEEETTSSCCEEC-CCS--SSEEEEEEECTTSSEEEEEEECSS----------CEE
T ss_pred CCCCEEEEEECCC-C-----CcEEEEEECCCCCEEEE-ecC--CCcccCeEECCCCCEEEEEECcCC----------ceE
Confidence 2444 44443211 1 24789999988776555 221 122223333345665555443211 157
Q ss_pred eeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 223 LDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++++|+.+.+...+..-. .....+. -+++.+++++.... ...++++|++.+.-..
T Consensus 337 i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~----~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 337 IAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM----GSVLNLVSTDGRFKAR 392 (415)
T ss_dssp EEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT----EEEEEEEETTSCCEEE
T ss_pred EEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC----ccEEEEEECCCCcEEE
Confidence 899999988876654322 2222222 27777777665431 2479999998777655
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.65 E-value=0.0096 Score=48.67 Aligned_cols=178 Identities=12% Similarity=0.099 Sum_probs=92.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCcc-ceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRK-IFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+..||..+++......+..... ...++.. +++.++.|+.+ ..+.+||..+.+....-..... .-..++..
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~ 192 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGHTD-GASCIDIS 192 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEEC
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeecccC-ceEEEEEC
Confidence 568888888876433322222111 1222222 55666666644 4578899888764322111111 11122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++..++.++.+ +.+..||+.+.+-... ...+.+ -.++....++..+++++.. ..+
T Consensus 193 ~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~-~~~~~~--v~~~~~s~~~~~l~~~~~~-------------~~i 248 (337)
T 1gxr_A 193 NDGTKLWTGGLD--------NTVRSWDLREGRQLQQ-HDFTSQ--IFSLGYCPTGEWLAVGMES-------------SNV 248 (337)
T ss_dssp TTSSEEEEEETT--------SEEEEEETTTTEEEEE-EECSSC--EEEEEECTTSSEEEEEETT-------------SCE
T ss_pred CCCCEEEEEecC--------CcEEEEECCCCceEee-ecCCCc--eEEEEECCCCCEEEEEcCC-------------CcE
Confidence 45555555532 5789999888764433 121111 2233333456777776643 457
Q ss_pred eEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
.+||+.+..-..+... ...-..++.. ++++++.++.+ ..+.+||.++++-.
T Consensus 249 ~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 249 EVLHVNKPDKYQLHLH--ESCVLSLKFAYCGKWFVSTGKD-------NLLNAWRTPYGASI 300 (337)
T ss_dssp EEEETTSSCEEEECCC--SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEE
T ss_pred EEEECCCCCeEEEcCC--ccceeEEEECCCCCEEEEecCC-------CcEEEEECCCCeEE
Confidence 8899877653332211 1111222222 67777777766 57889998776543
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.62 E-value=0.0087 Score=47.49 Aligned_cols=177 Identities=8% Similarity=-0.013 Sum_probs=93.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI- 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~- 144 (306)
..+++||+..+........... .-..++.. ++.||+.... ...+.+++..+........... ..-..++..
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~ 159 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGLN-YPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDN 159 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSCS-SEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCSC-CSCCCEEECT
T ss_pred CEEEEEeCCCceEeeeecCCcC-CCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccccC-CCceeEEEeC
Confidence 4688899887655444321111 12233333 6788887542 2467788776655433221111 111223332
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
+++||+.... .+.+.+||+....-... ..... ..-.+++...++.||+..... ..+.
T Consensus 160 ~g~l~v~~~~--------~~~i~~~~~~~~~~~~~-~~~~~-~~p~~i~~d~~g~l~v~~~~~-------------~~v~ 216 (270)
T 1rwi_B 160 SGNVYVTDTD--------NNRVVKLEAESNNQVVL-PFTDI-TAPWGIAVDEAGTVYVTEHNT-------------NQVV 216 (270)
T ss_dssp TCCEEEEEGG--------GTEEEEECTTTCCEEEC-CCSSC-CSEEEEEECTTCCEEEEETTT-------------SCEE
T ss_pred CCCEEEEECC--------CCEEEEEecCCCceEee-cccCC-CCceEEEECCCCCEEEEECCC-------------CcEE
Confidence 5778887532 25789999887764443 21111 112234444457898876432 4578
Q ss_pred EEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 225 VFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+|+++...-..... .....-.+++.- +++||+....+ +.+.+|++...+
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~-------~~v~~~~~~~~~ 266 (270)
T 1rwi_B 217 KLLAGSTTSTVLPF-TGLNTPLAVAVDSDRTVYVADRGN-------DRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCSCCEECCC-CSCSCEEEEEECTTCCEEEEEGGG-------TEEEEECCCGGG
T ss_pred EEcCCCCcceeecc-CCCCCceeEEECCCCCEEEEECCC-------CEEEEEcCCCcc
Confidence 89887654332211 111111233332 67888887655 578888876543
No 43
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.55 E-value=0.0063 Score=48.34 Aligned_cols=175 Identities=11% Similarity=0.036 Sum_probs=90.9
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI- 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~- 144 (306)
..+.+||+.+............. -..++.. ++.||+... . ..+.+||+.++....+..... ..-..++..
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~~-p~~i~~~~~g~l~v~~~--~----~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~ 117 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLYQ-PQGLAVDGAGTVYVTDF--N----NRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDT 117 (270)
T ss_dssp CEEEEECC-----EECCCCSCCS-CCCEEECTTCCEEEEET--T----TEEEEECTTCSCCEECCCCSC-SSEEEEEECT
T ss_pred CcEEEecCCCcccceEeeCCcCC-cceeEECCCCCEEEEcC--C----CEEEEEeCCCceEeeeecCCc-CCCcceEECC
Confidence 56788888776654433221111 1233333 568888865 2 568889988776544432111 111233332
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
+++||+.... .+.+.++|..+....... .....+ ..++...+++||+..... ..+
T Consensus 118 ~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~~~-------------~~i 173 (270)
T 1rwi_B 118 QGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTGLNDP---DGVAVDNSGNVYVTDTDN-------------NRV 173 (270)
T ss_dssp TCCEEEEEGG--------GTEEEEECTTCCSCEECCCCSCCSC---CCEEECTTCCEEEEEGGG-------------TEE
T ss_pred CCCEEEEECC--------CCEEEEEECCCceeEeeccccCCCc---eeEEEeCCCCEEEEECCC-------------CEE
Confidence 5788887532 256888887766544331 111122 234444457888875432 467
Q ss_pred eEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+||+....-........ ..-.+++.- ++.+|+..... +.+.+||+++..
T Consensus 174 ~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~-------~~v~~~~~~~~~ 224 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT-------NQVVKLLAGSTT 224 (270)
T ss_dssp EEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT-------SCEEEECTTCSC
T ss_pred EEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC-------CcEEEEcCCCCc
Confidence 889887665433221111 111233332 56888876544 468888887654
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.53 E-value=0.013 Score=49.72 Aligned_cols=150 Identities=14% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++.+++.|+.+ ..+.+||..+.+-.. +....... ..++.. +..+++.|+... -..+..||..+.
T Consensus 228 ~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~p~~~~ll~~~~gs~------d~~i~i~d~~~~ 294 (401)
T 4aez_A 228 DGLQLASGGND-----NVVQIWDARSSIPKFTKTNHNAAV--KAVAWCPWQSNLLATGGGTM------DKQIHFWNAATG 294 (401)
T ss_dssp TSSEEEEEETT-----SCEEEEETTCSSEEEEECCCSSCC--CEEEECTTSTTEEEEECCTT------TCEEEEEETTTC
T ss_pred CCCEEEEEeCC-----CeEEEccCCCCCccEEecCCcceE--EEEEECCCCCCEEEEecCCC------CCEEEEEECCCC
Confidence 56677777754 457788988765322 22111111 122222 446676664221 257899998877
Q ss_pred eeEEcccccCCcceeEEEEEEeCCEEEEE-cCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccce-eee-e
Q psy9754 175 TWTTLATKLRYPRYLATLVSVNNEKLYII-GGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHS-ASV-L 251 (306)
Q Consensus 175 ~W~~~~~~~~~~~~~~~~~~~~~~~iyi~-GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~-~~~-~ 251 (306)
+-... ..... .-.++....++..++. +|... ..+.+||..+........++....... ++. -
T Consensus 295 ~~~~~-~~~~~--~v~~~~~s~~~~~l~~~~g~~d------------g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 295 ARVNT-VDAGS--QVTSLIWSPHSKEIMSTHGFPD------------NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp CEEEE-EECSS--CEEEEEECSSSSEEEEEECTTT------------CEEEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CEEEE-EeCCC--cEEEEEECCCCCeEEEEeecCC------------CcEEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 64333 11111 1122333334444444 34322 567888888776665544433222222 222 2
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++..++.++.+ ..+.+||+.+++-
T Consensus 360 dg~~l~s~~~d-------g~i~iw~~~~~~~ 383 (401)
T 4aez_A 360 DGRILSTAASD-------ENLKFWRVYDGDH 383 (401)
T ss_dssp TSSEEEEECTT-------SEEEEEECCC---
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcc
Confidence 77888888877 5788999987664
No 45
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.52 E-value=0.027 Score=46.12 Aligned_cols=181 Identities=6% Similarity=-0.020 Sum_probs=89.0
Q ss_pred ceEEEEeCCCCCe-ee-CCCCCCCccceeeEEE-C-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeE
Q psy9754 67 NSVWSFNPNNKQW-TQ-EPNMTYPRKIFSFVSC-L-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W-~~-~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 142 (306)
..++.+|+.+++- .. +.....+ .++++.. + +.+| .+.... ....+.++|..+++....-+ .....+.++
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~ 134 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSS--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIP--IPYDAVGIA 134 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSC--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEE--CCTTEEEEE
T ss_pred CeEEEEECCCCceeEEecccCCCC--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEE--CCCCccceE
Confidence 5789999988774 22 2211112 1213333 3 3566 432221 11378999999887544322 222223333
Q ss_pred EE-CC-EEEEEcccCCCCCCCCCcc-EEEEeCCCCe-eEEc-ccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCccc
Q psy9754 143 EI-ND-KIWIAGGYTGDKMNPVTDK-VECYDPRTNT-WTTL-ATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQK 216 (306)
Q Consensus 143 ~~-~~-~iyv~GG~~~~~~~~~~~~-~~~~d~~~~~-W~~~-~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~ 216 (306)
.. ++ .+|+.+... +. +..|+..... .... ....+.......++...+++ +|+.+...
T Consensus 135 ~spdg~~l~~~~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~--------- 197 (331)
T 3u4y_A 135 ISPNGNGLILIDRSS--------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG--------- 197 (331)
T ss_dssp ECTTSSCEEEEEETT--------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT---------
T ss_pred ECCCCCEEEEEecCC--------CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC---------
Confidence 33 33 577765422 34 6666655322 1111 01111111122333444554 77765432
Q ss_pred ccccceeeEEECCCCce-EecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeeccccce
Q psy9754 217 MYSVSDLDVFVSNEKEW-KFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W-~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+. +.+..++....-..++.- +++ +|+..... ..+.+||+++++.
T Consensus 198 ----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 198 ----NSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTEST-------VDVFNFNQLSGTL 255 (331)
T ss_dssp ----TEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSE-------EEEEEEETTTTEE
T ss_pred ----CeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCC-------CEEEEEECCCCce
Confidence 5688999987765 113333333222333333 555 66665433 5688999988776
No 46
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.52 E-value=0.021 Score=46.83 Aligned_cols=171 Identities=7% Similarity=0.003 Sum_probs=84.9
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCC-CcEEecc--CC--cccccceeeEEE-C-CEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVA-HTWEDVA--PL--KIARMGMAVAEI-N-DKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~-~~w~~~~--~~--~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
+.||+.+..+ ..+.+||..+ ++...+. .. +....-..++.. + ..+|+.+.. .+.+.+||.
T Consensus 141 ~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~~ 207 (343)
T 1ri6_A 141 RTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--------NSSVDVWEL 207 (343)
T ss_dssp SEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--------TTEEEEEES
T ss_pred CEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--------CCEEEEEEe
Confidence 3677765222 4588888887 6655332 11 111111122222 3 357776532 256788887
Q ss_pred C--CCeeEEcc--cccCCc---ceeE-EEEEEeCC-EEEEEcCCCCCCCCCcccccccceeeEEECC--CCceEecccCC
Q psy9754 172 R--TNTWTTLA--TKLRYP---RYLA-TLVSVNNE-KLYIIGGASQTDATNTQKMYSVSDLDVFVSN--EKEWKFVTELV 240 (306)
Q Consensus 172 ~--~~~W~~~~--~~~~~~---~~~~-~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~--~~~W~~~~~~p 240 (306)
. +..++... ...+.. .... .++...++ .||+.+... ..+.+||+. +.+++.+..++
T Consensus 208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-------------~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-------------SLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-------------TEEEEEEECTTSCCEEEEEEEE
T ss_pred cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-------------CEEEEEEEcCCCCceEEeeeec
Confidence 4 34443221 112211 1112 23333344 566554322 457888877 55677665554
Q ss_pred cccccceeeee-CCE-EEEEeCccCccccccceEEEe--eccccceeccCCCCcccccceeeEEecC
Q psy9754 241 VPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECW--CFDRQAWIKGVSGLPATILGHSSVALPL 303 (306)
Q Consensus 241 ~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~y--d~~~~~W~~~~~~~p~~r~~~~~~~~~~ 303 (306)
....-..++.- +++ ||+.+..+ ..+.+| |+++++++. +..++.+..-.++++.+.
T Consensus 275 ~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~v~~~d~~~g~~~~-~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 275 TETQPRGFNVDHSGKYLIAAGQKS-------HHISVYEIVGEQGLLHE-KGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp CSSSCCCEEECTTSSEEEEECTTT-------CEEEEEEEETTTTEEEE-EEEEECSSSCCEEEEEEE
T ss_pred CCCccceEEECCCCCEEEEecCCC-------CeEEEEEEcCCCceeeE-ccccccCCCCeeEEEEcc
Confidence 43332233333 555 55554333 345555 777888877 556666555555555543
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.51 E-value=0.024 Score=45.47 Aligned_cols=178 Identities=7% Similarity=0.065 Sum_probs=94.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEE-ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVS-CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI- 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~- 144 (306)
..+.+||+. ++............-+.++. -++.+|+..... ..+.++|+. ++.+..........-..++..
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~ 108 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA-----NKIGRITKK-GIIKEYTLPNPDSAPYGITEGP 108 (299)
T ss_dssp TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECT
T ss_pred CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC-----CeEEEECCC-CcEEEEeCCCcCCCceeeEECC
Confidence 568899988 77665432111122223333 267888875421 458888886 455444311111122233333
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++++|+.... ...+.++|+ +.+......+ .....-..++...++.+|+..... ..+.
T Consensus 109 ~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i~ 165 (299)
T 2z2n_A 109 NGDIWFTEMN--------GNRIGRITD-DGKIREYELP-NKGSYPSFITLGSDNALWFTENQN-------------NAIG 165 (299)
T ss_dssp TSCEEEEETT--------TTEEEEECT-TCCEEEEECS-STTCCEEEEEECTTSCEEEEETTT-------------TEEE
T ss_pred CCCEEEEecC--------CceEEEECC-CCCEEEecCC-CCCCCCceEEEcCCCCEEEEeCCC-------------CEEE
Confidence 5788887532 257889998 6655554111 111222344444467898865321 4678
Q ss_pred EEECCCCceEecccCCcc-cccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 225 VFVSNEKEWKFVTELVVP-RHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~-~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++|+ +.+...+. .+.. ..-.+++.- ++.+|+..... ..+.+||+ +++...
T Consensus 166 ~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~-~g~~~~ 217 (299)
T 2z2n_A 166 RITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEIIG-------NKIGRITT-SGEITE 217 (299)
T ss_dssp EECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-------TEEEEECT-TCCEEE
T ss_pred EEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccCC-------ceEEEECC-CCcEEE
Confidence 8998 66666542 1211 111233332 67888875433 46778888 666544
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.51 E-value=0.024 Score=48.15 Aligned_cols=179 Identities=11% Similarity=0.043 Sum_probs=86.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEE-eccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWE-DVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~ 144 (306)
..+..||..+++-...-... ...-.+++.. ++++++.|+.+ ..+.+||..+.+-. .+.. ....-..++..
T Consensus 119 g~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~ 190 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAH-VSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPRTLIG--HRATVTDIAII 190 (420)
T ss_dssp SCEEEECTTSCEEEEETTSS-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCEEEEC--CSSCEEEEEEE
T ss_pred CCEEEEeCCCcceeeecccc-cCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCceEEcC--CCCcEEEEEEc
Confidence 45788888776543322111 1122223333 56666666644 46788888766421 1111 11111122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCccee-EEEEE---------------------EeCCEEE
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYL-ATLVS---------------------VNNEKLY 201 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~---------------------~~~~~iy 201 (306)
++..++.|+.+ ..+..+|+.+.+-............. ..... ..+++++
T Consensus 191 ~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 191 DRGRNVLSASLD--------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp TTTTEEEEEETT--------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred CCCCEEEEEcCC--------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 45555555533 46888998877643321111111111 11111 1246666
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeeccc
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
+.|+.. ..+.+||+.+.+-.............+++.. ++. +++.|+.+ ..+.+||+++
T Consensus 263 ~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-------g~i~vwd~~~ 322 (420)
T 3vl1_A 263 IAGHVS-------------GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-------GMLAQWDLRS 322 (420)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTC
T ss_pred EEEcCC-------------CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-------CeEEEEEcCC
Confidence 766553 4578899876653211111111111222222 555 77777766 4688888876
Q ss_pred cc
Q psy9754 280 QA 281 (306)
Q Consensus 280 ~~ 281 (306)
.+
T Consensus 323 ~~ 324 (420)
T 3vl1_A 323 PE 324 (420)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 49
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.49 E-value=0.0053 Score=52.80 Aligned_cols=174 Identities=10% Similarity=0.126 Sum_probs=88.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCcccccceeeEEEC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIARMGMAVAEIN 145 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~~~ 145 (306)
..+..+|..+++-...- .........+..++..++.|+.+ ..+.+||..+..-... ..+........+...+
T Consensus 193 g~i~vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 265 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTL--IHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD 265 (435)
T ss_dssp SCEEEEESSSCCEEEEE--CCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE
T ss_pred CeEEEEECCCCcEEEEE--cCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC
Confidence 46788888877643221 11111122223345566666644 4577788876652211 1111111111222234
Q ss_pred CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeE
Q psy9754 146 DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDV 225 (306)
Q Consensus 146 ~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~ 225 (306)
+..++.|+.+ +.+..+|+.+.+-........ .....+... +.+++.|+.. ..+.+
T Consensus 266 ~~~l~s~~~d--------g~i~vwd~~~~~~~~~~~~~~---~~v~~~~~~-~~~l~~g~~d-------------g~i~i 320 (435)
T 1p22_A 266 DKYIVSASGD--------RTIKVWNTSTCEFVRTLNGHK---RGIACLQYR-DRLVVSGSSD-------------NTIRL 320 (435)
T ss_dssp TTEEEEEETT--------SEEEEEETTTCCEEEEEECCS---SCEEEEEEE-TTEEEEEETT-------------SCEEE
T ss_pred CCEEEEEeCC--------CeEEEEECCcCcEEEEEcCCC---CcEEEEEeC-CCEEEEEeCC-------------CeEEE
Confidence 5555555432 568899988775433211111 112333445 5666766654 56889
Q ss_pred EECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 226 FVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 226 y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
||+.+.+-. ..+........+...++..++.|+.+ ..+.+||+.+..
T Consensus 321 wd~~~~~~~--~~~~~h~~~v~~~~~~~~~l~sg~~d-------g~i~vwd~~~~~ 367 (435)
T 1p22_A 321 WDIECGACL--RVLEGHEELVRCIRFDNKRIVSGAYD-------GKIKVWDLVAAL 367 (435)
T ss_dssp EETTTCCEE--EEECCCSSCEEEEECCSSEEEEEETT-------SCEEEEEHHHHT
T ss_pred EECCCCCEE--EEEeCCcCcEEEEEecCCEEEEEeCC-------CcEEEEECCCCC
Confidence 998766432 22221212223333478888888877 578899987654
No 50
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.47 E-value=0.021 Score=47.59 Aligned_cols=113 Identities=10% Similarity=0.035 Sum_probs=57.2
Q ss_pred EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCC
Q psy9754 47 NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAH 124 (306)
Q Consensus 47 i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~ 124 (306)
.+++|.+..... ..-.+|.+|+++++.+.+... ....-..++.. ++ .||+.+........-.++.++..++
T Consensus 15 ~~~vg~y~~~~~------~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 15 TMLVGTYTSGNS------KGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp EEEEEECCSSSC------CEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred EEEEEeccCCCC------CCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence 455676654321 134567788899888766543 11111222333 44 5777655321112233455666667
Q ss_pred cEEeccCCccc-ccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 125 TWEDVAPLKIA-RMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 125 ~w~~~~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
+.+.+...+.. .....++.-++.||+... . .+.+.+|++.+.
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~-~-------~~~v~~~~~~~~ 130 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTTNGKNIVTANY-S-------GGSITVFPIGQD 130 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEECSSEEEEEET-T-------TTEEEEEEBCTT
T ss_pred cEEEeeEeccCCCCcEEEEECCCEEEEEEC-C-------CCEEEEEEeCCC
Confidence 77776554422 222233333345666542 1 256778887643
No 51
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.46 E-value=0.015 Score=48.09 Aligned_cols=185 Identities=11% Similarity=0.072 Sum_probs=92.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc-ccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA-RMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~~~~~~~ 144 (306)
-.+|.+|.++++++.+........-..++.. +++||+.+.... ...+.+||..+++++.+..+... ..-..++..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~---~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD---EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT---EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC---CceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 4588889988888664322211111223333 678887754211 25688899988887766543221 111223332
Q ss_pred -CC-EEEEEcccCCCCCCCCCccEEEEeCC-CCeeEEcc---c--ccCCcc----eeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 145 -ND-KIWIAGGYTGDKMNPVTDKVECYDPR-TNTWTTLA---T--KLRYPR----YLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 145 -~~-~iyv~GG~~~~~~~~~~~~~~~~d~~-~~~W~~~~---~--~~~~~~----~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
++ .||+.+.. .+.+.+||+. +.+.+.+. . ..|.+| .-+.++...++++|+.+...
T Consensus 95 pdg~~l~~~~~~--------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~----- 161 (347)
T 3hfq_A 95 EARQLVYSANYH--------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS----- 161 (347)
T ss_dssp TTTTEEEEEETT--------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----
T ss_pred CCCCEEEEEeCC--------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----
Confidence 34 56666421 2467778774 33333321 0 011111 12234444467777665432
Q ss_pred CcccccccceeeEEECC-CCceEecccC--Ccccccceeeee-CCE-EEEEeCccCccccccceEEEeecc--ccce
Q psy9754 213 NTQKMYSVSDLDVFVSN-EKEWKFVTEL--VVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFD--RQAW 282 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~-~~~W~~~~~~--p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~--~~~W 282 (306)
..+.+|++. +.+...+... +....-..++.- +++ +|+.+... ..+.+|+.+ ++++
T Consensus 162 --------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 162 --------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-------SQIASLKYDTQTGAF 223 (347)
T ss_dssp --------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEEEETTTTEE
T ss_pred --------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-------CEEEEEEecCCCCce
Confidence 467888887 5555544322 111111122222 565 77765444 456666655 4554
No 52
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.46 E-value=0.029 Score=45.04 Aligned_cols=177 Identities=9% Similarity=0.080 Sum_probs=93.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCC-ccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYP-RKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+.+||+. ++...... +.. ..-..++.. ++.+|+.... ...+.+||+. ++.+..........-..++..
T Consensus 41 ~~v~~~~~~-~~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEV-PTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEG 112 (300)
T ss_dssp TEEEEECTT-SCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CceEEEEC-CCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceEC
Confidence 568889988 77655432 211 122233332 5788887532 2568889988 666544321111222233332
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++++|+.... .+.+.++|++ .+.... ........-..++...+++||+..... ..+
T Consensus 113 ~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~-------------~~i 169 (300)
T 2qc5_A 113 LNGDIWFTQLN--------GDRIGKLTAD-GTIYEY-DLPNKGSYPAFITLGSDNALWFTENQN-------------NSI 169 (300)
T ss_dssp STTCEEEEETT--------TTEEEEECTT-SCEEEE-ECSSTTCCEEEEEECTTSSEEEEETTT-------------TEE
T ss_pred CCCCEEEEccC--------CCeEEEECCC-CCEEEc-cCCCCCCCceeEEECCCCCEEEEecCC-------------CeE
Confidence 5788887521 2578899987 665544 111111122234444457888865322 467
Q ss_pred eEEECCCCceEecccCCcccc-cceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 224 DVFVSNEKEWKFVTELVVPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++||+ +.+...+. .+.... -.+++.- ++.||+..... ..+.+||+ +++...
T Consensus 170 ~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~-------~~i~~~~~-~g~~~~ 222 (300)
T 2qc5_A 170 GRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG-------NKIGRITT-TGEISE 222 (300)
T ss_dssp EEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-------TEEEEECT-TCCEEE
T ss_pred EEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC-------CEEEEEcC-CCcEEE
Confidence 88888 56665432 222111 1223322 67888875433 45778887 444433
No 53
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.44 E-value=0.011 Score=52.72 Aligned_cols=178 Identities=11% Similarity=-0.006 Sum_probs=83.5
Q ss_pred ceEEEEeC--CCCCeeeCCCCCCCccceeeEEE-----CC-EEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCC-----
Q psy9754 67 NSVWSFNP--NNKQWTQEPNMTYPRKIFSFVSC-----LD-KIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPL----- 132 (306)
Q Consensus 67 ~~~~~~d~--~t~~W~~~~~~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~----- 132 (306)
+.+..||+ .+.+- +..++....-..++.. ++ .+|+.+-. ...+.++|..+.+-.+ ++..
T Consensus 200 ~~V~v~D~~~~t~~~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 200 ARIDMIDLWAKEPTK--VAEIKIGIEARSVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp SEEEEEETTSSSCEE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSS
T ss_pred CeEEEEECcCCCCcE--EEEEecCCCcceEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccC
Confidence 56888998 56542 2222222222333333 44 45555322 2557788888776432 2211
Q ss_pred -----cccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcC
Q psy9754 133 -----KIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGG 205 (306)
Q Consensus 133 -----~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG 205 (306)
+..+....+... ++.+|+.. .. .+.+..+|..+.+-..+ ...+..+.-+..+...+++ +|+.+.
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~-~~-------~g~i~vvd~~~~~~l~~-~~i~~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNV-KE-------TGKVLLVNYKDIDNLTV-TSIGAAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEE-TT-------TTEEEEEECTTSSSCEE-EEEECCSSCCCEEECTTSCEEEEEEG
T ss_pred ccccccCCceEEEEECCCCCEEEEEE-CC-------CCeEEEEEecCCCccee-EEeccCcCccCceECCCCCEEEEEec
Confidence 111222222222 34555443 21 36788888876532111 1111122222333444455 444432
Q ss_pred CCCCCCCCcccccccceeeEEECCCCceEecc---cCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 206 ASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT---ELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~---~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+ ..+.++|..+.+-...- ..|.+-.......- ++.+|+.+.... ..|-+||.++
T Consensus 344 ~~-------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d------~~V~v~d~~~ 402 (543)
T 1nir_A 344 NS-------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD------GSISLIGTDP 402 (543)
T ss_dssp GG-------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS------SEEEEEECCT
T ss_pred CC-------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC------ceEEEEEeCC
Confidence 21 56788999887654322 22322111111112 367887764332 4677888876
No 54
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.44 E-value=0.033 Score=45.17 Aligned_cols=183 Identities=10% Similarity=0.066 Sum_probs=90.9
Q ss_pred ceEEEEeCCCCCeeeC-CCCCC--Ccc-ceeeEE-ECCEEEEEccCCC----------CCCCceeEEEeCCCCcEEeccC
Q psy9754 67 NSVWSFNPNNKQWTQE-PNMTY--PRK-IFSFVS-CLDKIYAIGGQDC----------KTLLSSVECYDPVAHTWEDVAP 131 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~-~~~~~--~~~-~~~~~~-~~~~iyv~GG~~~----------~~~~~~~~~~d~~~~~w~~~~~ 131 (306)
+.+++||+. ++...+ ..... +.. -..++. -++.+|+...... ......++++|+. ++.+.+..
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 368899998 777655 32211 111 122222 2678888754321 1122568889887 55544321
Q ss_pred CcccccceeeEEE-----CC-EEEEEcccCCCCCCCCCccEEEEeCC-CCeeEEcc--cccCCc--ceeEEEEEEeCCEE
Q psy9754 132 LKIARMGMAVAEI-----ND-KIWIAGGYTGDKMNPVTDKVECYDPR-TNTWTTLA--TKLRYP--RYLATLVSVNNEKL 200 (306)
Q Consensus 132 ~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~~~d~~-~~~W~~~~--~~~~~~--~~~~~~~~~~~~~i 200 (306)
.. ......+.. ++ .||+.... .+.+.+||++ +.+..... ...+.. ..-..++...++.|
T Consensus 170 ~~--~~~~~i~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 170 AF--QFPNGIAVRHMNDGRPYQLIVAETP--------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp EE--SSEEEEEEEECTTSCEEEEEEEETT--------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE
T ss_pred CC--CCcceEEEecccCCCCCEEEEEECC--------CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE
Confidence 10 111223333 33 57776421 2578888876 44432210 111111 11223444446888
Q ss_pred EEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeecc
Q psy9754 201 YIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 201 yi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
|+..... ..+.+||+++.+....-..+.. .-.+++.- +++ ||+..... ..+++|+++
T Consensus 240 ~v~~~~~-------------~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~dg~~l~v~~~~~-------~~l~~~~~~ 298 (314)
T 1pjx_A 240 LVANWGS-------------SHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKPQTKTIFVTEHEN-------NAVWKFEWQ 298 (314)
T ss_dssp EEEEETT-------------TEEEEECTTCBSCSEEEECSSS-CEEEEEECTTSSEEEEEETTT-------TEEEEEECS
T ss_pred EEEEcCC-------------CEEEEEcCCCCcEeEEEeCCCC-CceeEEECCCCCEEEEEeCCC-------CeEEEEeCC
Confidence 8875321 4678898875443222122221 12223322 555 77766543 578899987
Q ss_pred ccce
Q psy9754 279 RQAW 282 (306)
Q Consensus 279 ~~~W 282 (306)
....
T Consensus 299 ~~g~ 302 (314)
T 1pjx_A 299 RNGK 302 (314)
T ss_dssp SCBC
T ss_pred CCCc
Confidence 6443
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.43 E-value=0.009 Score=51.05 Aligned_cols=186 Identities=10% Similarity=0.037 Sum_probs=98.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc--cc-cceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI--AR-MGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~--~~-~~~~~~ 142 (306)
..++.+|+.+++++.+..++......+++.. ++.+++.++.+ ..+.++|+.+++.....+... .. .....+
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETI 175 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEE
T ss_pred eEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEE
Confidence 3788999887766655444333322233333 67888887643 458899999888665433211 11 111112
Q ss_pred E--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeC-CEEEEEcCCCCCCCCCcccccc
Q psy9754 143 E--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNN-EKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 143 ~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
. -++++++.++.+ ..+.++|+.+.+....... ... .-..++...+ ..+|+.+...
T Consensus 176 ~~~~~~~~~~s~~~d--------~~v~~~d~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~------------ 233 (433)
T 3bws_A 176 SIPEHNELWVSQMQA--------NAVHVFDLKTLAYKATVDL-TGK-WSKILLYDPIRDLVYCSNWIS------------ 233 (433)
T ss_dssp EEGGGTEEEEEEGGG--------TEEEEEETTTCCEEEEEEC-SSS-SEEEEEEETTTTEEEEEETTT------------
T ss_pred EEcCCCEEEEEECCC--------CEEEEEECCCceEEEEEcC-CCC-CeeEEEEcCCCCEEEEEecCC------------
Confidence 2 267888877633 5789999887664332121 111 1122333333 4566665432
Q ss_pred cceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCcccc-ccceEEEeeccccce
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKR-TLKSVECWCFDRQAW 282 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~-~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+....- +......+++.. +++.+++++....... .-..+.+||+.+++-
T Consensus 234 -~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 234 -EDISVIDRKTKLEIRKT--DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp -TEEEEEETTTTEEEEEC--CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred -CcEEEEECCCCcEEEEe--cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 56899999877654322 222222233332 5545555443211000 125788999877654
No 56
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.42 E-value=0.032 Score=44.69 Aligned_cols=178 Identities=8% Similarity=0.084 Sum_probs=90.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEE-ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVS-CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~ 144 (306)
..+.+||+....-..+....... -..++. -++.+|+..... ..+.+||+.......+........-..++. -
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATILQH-PRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND 173 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTCSC-EEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECS
T ss_pred CEEEEECCCCcEEEEecCccCCC-ceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCcEEEEECC
Confidence 56888885433223332211111 123333 267888875422 568889977655444432111111122332 2
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
+++||+.... .+.+.+||+.......+ ........-.+++...++.||+...... ..+.
T Consensus 174 ~g~l~v~~~~--------~~~i~~~~~~g~~~~~~-~~~g~~~~p~~i~~d~~G~l~v~~~~~~------------~~i~ 232 (286)
T 1q7f_A 174 KQEIFISDNR--------AHCVKVFNYEGQYLRQI-GGEGITNYPIGVGINSNGEILIADNHNN------------FNLT 232 (286)
T ss_dssp SSEEEEEEGG--------GTEEEEEETTCCEEEEE-SCTTTSCSEEEEEECTTCCEEEEECSSS------------CEEE
T ss_pred CCCEEEEECC--------CCEEEEEcCCCCEEEEE-ccCCccCCCcEEEECCCCCEEEEeCCCC------------EEEE
Confidence 5789987532 35789999876655555 2211011122344444688998865431 2678
Q ss_pred EEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 225 VFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
+||++...-..+..-.....-.+++.- ++++|+.. .+ +.+.+|+...
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~-------~~v~v~~~~~ 280 (286)
T 1q7f_A 233 IFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS-KD-------YRLYIYRYVQ 280 (286)
T ss_dssp EECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-TT-------TEEEEEECSC
T ss_pred EECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC-CC-------CeEEEEEccc
Confidence 888765433333221111111233333 78988884 23 5677776543
No 57
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.42 E-value=0.032 Score=44.67 Aligned_cols=181 Identities=10% Similarity=0.069 Sum_probs=93.0
Q ss_pred ceEEEEeCCCCCeeeCCCCC---CC-ccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccccccee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT---YP-RKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMA 140 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~---~~-~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~ 140 (306)
..+.+||+.......+.... .. ..-..++. -++.||+.+... ...+.+||........+...... .-..
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~~-~~~~ 125 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYGQFVRKFGATILQ-HPRG 125 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTSCEEEEECTTTCS-CEEE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCCcEEEEecCccCC-CceE
Confidence 56888887744333332211 11 11223333 267999986421 25688899655444443221111 1122
Q ss_pred eEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccc
Q psy9754 141 VAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 141 ~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
+++ -++++|+.... .+.+.+||+.......+ ........-.+++...++++|+.+...
T Consensus 126 i~~~~~g~l~v~~~~--------~~~i~~~~~~g~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~------------ 184 (286)
T 1q7f_A 126 VTVDNKGRIIVVECK--------VMRVIIFDQNGNVLHKF-GCSKHLEFPNGVVVNDKQEIFISDNRA------------ 184 (286)
T ss_dssp EEECTTSCEEEEETT--------TTEEEEECTTSCEEEEE-ECTTTCSSEEEEEECSSSEEEEEEGGG------------
T ss_pred EEEeCCCCEEEEECC--------CCEEEEEcCCCCEEEEe-CCCCccCCcEEEEECCCCCEEEEECCC------------
Confidence 332 35788887532 25789999776554444 211111112234444468898875432
Q ss_pred cceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
..+.+||++......+........-.+++.- ++++|+....+. ..+.+||++..
T Consensus 185 -~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~------~~i~~~~~~g~ 239 (286)
T 1q7f_A 185 -HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN------FNLTIFTQDGQ 239 (286)
T ss_dssp -TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS------CEEEEECTTSC
T ss_pred -CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC------EEEEEECCCCC
Confidence 5688999865544443321100111233332 678888875441 26888887654
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.41 E-value=0.033 Score=45.37 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=88.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~ 144 (306)
..+..||..+++....-...... ..+++.. ++..++.++.+ ..+.+||..+.+-...-..+.. -..++. -
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~ 234 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTDG-ASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCP 234 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEECT
T ss_pred CcEEEEeCCCCceeeeeecccCc-eEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCCc--eEEEEECC
Confidence 45788898876543221111111 1222222 55666666643 4688899887764332222111 112222 2
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++.++++|+.+ +.+..||..+..-..+ ..... .-..+....++++++.++.. ..+.
T Consensus 235 ~~~~l~~~~~~--------~~i~~~~~~~~~~~~~-~~~~~--~v~~~~~~~~~~~l~~~~~d-------------g~i~ 290 (337)
T 1gxr_A 235 TGEWLAVGMES--------SNVEVLHVNKPDKYQL-HLHES--CVLSLKFAYCGKWFVSTGKD-------------NLLN 290 (337)
T ss_dssp TSSEEEEEETT--------SCEEEEETTSSCEEEE-CCCSS--CEEEEEECTTSSEEEEEETT-------------SEEE
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCCeEEE-cCCcc--ceeEEEECCCCCEEEEecCC-------------CcEE
Confidence 45556665432 5688999887764444 22111 11233334456766766653 5688
Q ss_pred EEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeec
Q psy9754 225 VFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
+||+.+.+-.... .....-.+++.. +++.++.++.+ ..+.+|++
T Consensus 291 ~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~iw~~ 335 (337)
T 1gxr_A 291 AWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGD-------KKATVYEV 335 (337)
T ss_dssp EEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETT-------SCEEEEEE
T ss_pred EEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCC-------CeEEEEEE
Confidence 9998876644221 111112222222 67777777766 46777764
No 59
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.41 E-value=0.033 Score=44.65 Aligned_cols=172 Identities=5% Similarity=0.035 Sum_probs=91.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCC-CccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTY-PRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+++||+. ++..... ++. ...-..++.. ++.||+.... ...+.++|+ +++............-..++..
T Consensus 78 ~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLG 149 (299)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEc
Confidence 468889886 5554433 221 1222333333 5789887532 256888998 6665544221111122233332
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++++|+.... .+.+.++|+ +.+......+.. ...-.+++...++.||+..... ..+
T Consensus 150 ~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~-------------~~i 206 (299)
T 2z2n_A 150 SDNALWFTENQ--------NNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEIIG-------------NKI 206 (299)
T ss_dssp TTSCEEEEETT--------TTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTT-------------TEE
T ss_pred CCCCEEEEeCC--------CCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccCC-------------ceE
Confidence 5688886421 357899998 776665411111 1112234444457888875432 567
Q ss_pred eEEECCCCceEecccCCcccc-cceeeee-CCEEEEEeCccCccccccceEEEeecc
Q psy9754 224 DVFVSNEKEWKFVTELVVPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
.+||+ +.+...+. ++.... -.+++.- ++++|+..... ..+.+||++
T Consensus 207 ~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~d~~ 254 (299)
T 2z2n_A 207 GRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGA-------NKIGRLTSN 254 (299)
T ss_dssp EEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT-------TEEEEEETT
T ss_pred EEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCC-------ceEEEECCC
Confidence 88998 66666542 221111 1233332 67888875333 468888883
No 60
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.015 Score=48.40 Aligned_cols=181 Identities=12% Similarity=0.116 Sum_probs=90.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCcc-ceeeEEE-C--CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-ee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRK-IFSFVSC-L--DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-AV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-~~ 141 (306)
..+..||....++..+..+..... -.+++.. + +.+++.|+.+ ..+.+||..+++|..+..+....... .+
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 345666665555544433322111 1222222 2 5666676654 45778898888876665444222222 22
Q ss_pred EEE-C--CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-------------CCEEEEEcC
Q psy9754 142 AEI-N--DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-------------NEKLYIIGG 205 (306)
Q Consensus 142 ~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-------------~~~iyi~GG 205 (306)
+.. + +.+++.|+.+ ..+..||..+..-............-.++.... ++.+++.|+
T Consensus 108 ~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp EECCGGGCSEEEEEETT--------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE
T ss_pred EeCCCCCCCEEEEecCC--------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence 222 2 4556666533 567888877663211100001111111222222 366777776
Q ss_pred CCCCCCCCcccccccceeeEEECCCCc--eEecccCCcccccc-eeeee-C---CEEEEEeCccCccccccceEEEeecc
Q psy9754 206 ASQTDATNTQKMYSVSDLDVFVSNEKE--WKFVTELVVPRHAH-SASVL-S---SQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~~~~~~p~~~~~~-~~~~~-~---~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
.. ..+.+||+.+.. +..+..+....... +++.. + +.+++.++.+ ..+.+||..
T Consensus 180 ~d-------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------g~i~iwd~~ 239 (379)
T 3jrp_A 180 AD-------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-------RTCIIWTQD 239 (379)
T ss_dssp TT-------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-------SCEEEEEES
T ss_pred CC-------------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-------CEEEEEeCC
Confidence 54 457778775443 44444333222222 22222 5 7888888877 468889887
Q ss_pred cc
Q psy9754 279 RQ 280 (306)
Q Consensus 279 ~~ 280 (306)
+.
T Consensus 240 ~~ 241 (379)
T 3jrp_A 240 NE 241 (379)
T ss_dssp ST
T ss_pred CC
Confidence 75
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.39 E-value=0.018 Score=49.58 Aligned_cols=173 Identities=14% Similarity=0.175 Sum_probs=88.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
..+..+|..+++-... +.........+..++..++.|+.+ ..+.+||..+++-... +........+...++
T Consensus 179 g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~ 249 (445)
T 2ovr_B 179 RTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD-----ATLRVWDIETGQCLHV--LMGHVAAVRCVQYDG 249 (445)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-----SEEEEEESSSCCEEEE--EECCSSCEEEEEECS
T ss_pred CeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCcccEEEEEECC
Confidence 4678888887653221 111111112222344455556544 5678888887653221 111111122233366
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEE
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVF 226 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y 226 (306)
..++.|+.+ ..+..+|+.+.+-....... .. ....+... +..++.|+.. ..+.+|
T Consensus 250 ~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~-~~--~v~~~~~~-~~~l~~~~~d-------------~~i~i~ 304 (445)
T 2ovr_B 250 RRVVSGAYD--------FMVKVWDPETETCLHTLQGH-TN--RVYSLQFD-GIHVVSGSLD-------------TSIRVW 304 (445)
T ss_dssp SCEEEEETT--------SCEEEEEGGGTEEEEEECCC-SS--CEEEEEEC-SSEEEEEETT-------------SCEEEE
T ss_pred CEEEEEcCC--------CEEEEEECCCCcEeEEecCC-CC--ceEEEEEC-CCEEEEEeCC-------------CeEEEE
Confidence 666666543 46788898776543221111 11 12233334 6666666654 567899
Q ss_pred ECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 227 VSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 227 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
|+.+.+-.. .+........+...++..++.|+.+ ..+.+||+++++-
T Consensus 305 d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~ 351 (445)
T 2ovr_B 305 DVETGNCIH--TLTGHQSLTSGMELKDNILVSGNAD-------STVKIWDIKTGQC 351 (445)
T ss_dssp ETTTCCEEE--EECCCCSCEEEEEEETTEEEEEETT-------SCEEEEETTTCCE
T ss_pred ECCCCCEEE--EEcCCcccEEEEEEeCCEEEEEeCC-------CeEEEEECCCCcE
Confidence 987765332 1221222223333466677777766 4688888876553
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.37 E-value=0.043 Score=45.32 Aligned_cols=180 Identities=7% Similarity=0.041 Sum_probs=84.4
Q ss_pred eceEEEEeCCCCCeeeCCCCCC-CccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCC-CCcEEeccCCccc------
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTY-PRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPV-AHTWEDVAPLKIA------ 135 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~-~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~-~~~w~~~~~~~~~------ 135 (306)
...++.||+.+++++.+..... ...-..++.. ++ .||+.+..+ ..+.+|+.. +++.+.+......
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 4678889888777766544221 1111223333 44 566665321 456677764 3344433222111
Q ss_pred c----cceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCC-CCeeEEccc-ccCCcceeEEEEEEeCCE-EEEEcCCC
Q psy9754 136 R----MGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPR-TNTWTTLAT-KLRYPRYLATLVSVNNEK-LYIIGGAS 207 (306)
Q Consensus 136 ~----~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~~~~~~~~~~~~~~~~~~-iyi~GG~~ 207 (306)
+ .-+.++. -++++|+.+.. .+.+.+||+. +.+...+.. ..+....-..++...+++ +|+.+...
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~ 208 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG--------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS 208 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT--------TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cccCCCceEEEECCCCcEEEEeCC--------CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC
Confidence 0 1112222 25667765421 2568888887 555544311 111111112233444555 77765432
Q ss_pred CCCCCCcccccccceeeEEECC--CCceEecc---cCCcc----cccceeeee-CCE-EEEEeCccCccccccceEEEee
Q psy9754 208 QTDATNTQKMYSVSDLDVFVSN--EKEWKFVT---ELVVP----RHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWC 276 (306)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~y~~~--~~~W~~~~---~~p~~----~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd 276 (306)
..+.+|+.+ +.+++.+. ..+.. .....++.- +++ ||+.+... +.+.+|+
T Consensus 209 -------------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-------~~v~v~~ 268 (347)
T 3hfq_A 209 -------------SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-------NTLAVFA 268 (347)
T ss_dssp -------------TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-------TEEEEEE
T ss_pred -------------CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-------CEEEEEE
Confidence 344555544 56665433 22221 111222222 554 66665433 5688888
Q ss_pred cc
Q psy9754 277 FD 278 (306)
Q Consensus 277 ~~ 278 (306)
++
T Consensus 269 ~~ 270 (347)
T 3hfq_A 269 VT 270 (347)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.34 E-value=0.044 Score=45.11 Aligned_cols=182 Identities=12% Similarity=0.057 Sum_probs=94.1
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-C-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccc-------
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-L-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIAR------- 136 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~------- 136 (306)
...++.+|+.+++-...-+. ...-..++.. + +.+|+.+..+ ..+.++|+.+++-...-+.....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 140 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEVRP 140 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSCCC
T ss_pred CccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCccccccCC
Confidence 46899999988764332221 1112233333 4 4588776533 47889999888743322221111
Q ss_pred -cceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeC-CEEEEEcCCCCCCCC
Q psy9754 137 -MGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNN-EKLYIIGGASQTDAT 212 (306)
Q Consensus 137 -~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~iyi~GG~~~~~~~ 212 (306)
.-..++.. ++++|+.+... ...+.++|+.+.+-......... ....++...+ +.+|+... .
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-~----- 205 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKLKTAIQNTGK--MSTGLALDSEGKRLYTTNA-D----- 205 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEEEEEECCCCT--TCCCCEEETTTTEEEEECT-T-----
T ss_pred CCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCceEEEecCCCC--ccceEEECCCCCEEEEEcC-C-----
Confidence 11223332 45677766321 25699999988765433121111 1112333333 45666533 1
Q ss_pred CcccccccceeeEEECCCCceEecccCCc--cc-ccceeeee-CC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTELVV--PR-HAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~~p~--~~-~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+.++|+.+.+-......+. +. ...+++.. ++ .+|+..... ..+++||+++++...
T Consensus 206 --------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 206 --------GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-------AEVLVVDTRNGNILA 267 (353)
T ss_dssp --------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-------SEEEEEETTTCCEEE
T ss_pred --------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEE
Confidence 467889988765443222211 11 11223333 44 576665433 578999998776543
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.32 E-value=0.039 Score=47.60 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=49.3
Q ss_pred ccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccc
Q psy9754 164 DKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPR 243 (306)
Q Consensus 164 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~ 243 (306)
+.+..||..+.+-...... .... -.++....++..++.|+.. ..+.+||+.+.+-. ..+....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~-~~~~-v~~~~~~~~~~~l~sg~~d-------------g~i~vwd~~~~~~~--~~~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG-HTDR-IYSTIYDHERKRCISASMD-------------TTIRIWDLENGELM--YTLQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC-CSSC-EEEEEEETTTTEEEEEETT-------------SCEEEEETTTTEEE--EEECCCS
T ss_pred CeEEEEECCCCcEEEEecC-CCCC-EEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCcEE--EEEeCCC
Confidence 5688999887764332111 1111 1233344446666776654 45788998765432 2222222
Q ss_pred ccceeeeeCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 244 HAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 244 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
....+...++..++.|+.+ ..+.+||+.+.
T Consensus 353 ~~v~~~~~~~~~l~s~s~d-------g~v~vwd~~~~ 382 (464)
T 3v7d_B 353 ALVGLLRLSDKFLVSAAAD-------GSIRGWDANDY 382 (464)
T ss_dssp SCEEEEEECSSEEEEEETT-------SEEEEEETTTC
T ss_pred CcEEEEEEcCCEEEEEeCC-------CcEEEEECCCC
Confidence 2223334456666666665 35667776653
No 65
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.30 E-value=0.039 Score=45.62 Aligned_cols=165 Identities=11% Similarity=0.064 Sum_probs=80.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~ 144 (306)
..+..+|..+++-...-..... .-.+++.. ++.+++.|+.+ ..+.+||..+..-.. +... ...-..++..
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~ 235 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQTFTGH--ESDINAICFF 235 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEEECCC--SSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEEEEcCC--cCCEEEEEEc
Confidence 4577888887654321111111 11222222 56777777755 457778887765322 1111 1111122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++.+++.|+.+ ..+..||..+.+-............-.++....++++++.|+.. ..+
T Consensus 236 p~~~~l~s~s~d--------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-------------~~i 294 (340)
T 1got_B 236 PNGNAFATGSDD--------ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-------------FNC 294 (340)
T ss_dssp TTSSEEEEEETT--------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-------------SEE
T ss_pred CCCCEEEEEcCC--------CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-------------CeE
Confidence 45666666533 46888998876532220111111111233333457777777654 567
Q ss_pred eEEECCCCceEecccCCcccccceeeee--CCEEEEEeCcc
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVT 262 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~ 262 (306)
.+||..+..- +..+........++.+ ++..++.|+.+
T Consensus 295 ~vwd~~~~~~--~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 295 NVWDALKADR--AGVLAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEcccCcE--eeEeecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 8898765432 2222111111112222 66777777766
No 66
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.30 E-value=0.045 Score=43.85 Aligned_cols=177 Identities=9% Similarity=0.053 Sum_probs=92.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc-ccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA-RMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~~~~~~- 143 (306)
..+++||+. +++...........-..++.. ++.+|+.... ...+.++|+. ++..... ++.. ..-..++.
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLG 154 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEEC
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEEC
Confidence 568899988 776544321111222333333 6788887532 1468889987 6555432 2211 11122222
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
-++++|+.... ...+.+||+ +.+...+..+.. ...-..++...++.||+..... ..+
T Consensus 155 ~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~-------------~~i 211 (300)
T 2qc5_A 155 SDNALWFTENQ--------NNSIGRITN-TGKLEEYPLPTN-AAAPVGITSGNDGALWFVEIMG-------------NKI 211 (300)
T ss_dssp TTSSEEEEETT--------TTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTT-------------TEE
T ss_pred CCCCEEEEecC--------CCeEEEECC-CCcEEEeeCCCC-CCCcceEEECCCCCEEEEccCC-------------CEE
Confidence 25678886421 257899998 666665421111 1122233344467898875332 457
Q ss_pred eEEECCCCceEecccCCccccc-ceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHA-HSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
.+||+ +.++.... ++..... .+++.- +++||+..... +.+.+||+ +++...
T Consensus 212 ~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~-------~~i~~~~~-~g~~~~ 264 (300)
T 2qc5_A 212 GRITT-TGEISEYD-IPTPNARPHAITAGKNSEIWFTEWGA-------NQIGRITN-DNTIQE 264 (300)
T ss_dssp EEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT-------TEEEEECT-TSCEEE
T ss_pred EEEcC-CCcEEEEE-CCCCCCCceEEEECCCCCEEEeccCC-------CeEEEECC-CCcEEE
Confidence 88888 55555442 1211111 223332 67888876433 46788888 344433
No 67
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.29 E-value=0.05 Score=44.65 Aligned_cols=171 Identities=8% Similarity=0.108 Sum_probs=85.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~- 143 (306)
..+..||..+++-...-... .....+++.. +++.++.|+.+ ..+.+||..+++-.. +.....+. ..++.
T Consensus 144 g~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~~~~h~~~v--~~l~~s 215 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHTLEGHAMPI--RSLTFS 215 (321)
T ss_dssp SEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSSCC--CEEEEC
T ss_pred CcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEcccCCce--eEEEEc
Confidence 45677787766532211111 1111222222 56777777654 457788988776322 22111111 12222
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
-++.+++.|+.+ ..+..||..+......-... ...-.+++...++..++.|+.. ..+
T Consensus 216 pd~~~l~s~s~d--------g~i~iwd~~~~~~~~~~~~h--~~~v~~~~~sp~~~~l~s~s~D-------------~~v 272 (321)
T 3ow8_A 216 PDSQLLVTASDD--------GYIKIYDVQHANLAGTLSGH--ASWVLNVAFCPDDTHFVSSSSD-------------KSV 272 (321)
T ss_dssp TTSCEEEEECTT--------SCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETT-------------SCE
T ss_pred CCCCEEEEEcCC--------CeEEEEECCCcceeEEEcCC--CCceEEEEECCCCCEEEEEeCC-------------CcE
Confidence 256666666533 46888998876643321111 1111223333356676776654 567
Q ss_pred eEEECCCCceEecccCCccccc-ceeeee-CCEEEEEeCccCccccccceEEEeec
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHA-HSASVL-SSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
.+||+.+.+-. ..+...... .+++.. ++..++.+|.+ ..+.+||.
T Consensus 273 ~iwd~~~~~~~--~~~~~h~~~v~~v~~s~~g~~l~s~~~d-------~~i~vwd~ 319 (321)
T 3ow8_A 273 KVWDVGTRTCV--HTFFDHQDQVWGVKYNGNGSKIVSVGDD-------QEIHIYDC 319 (321)
T ss_dssp EEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETT-------CCEEEEEC
T ss_pred EEEeCCCCEEE--EEEcCCCCcEEEEEECCCCCEEEEEeCC-------CeEEEEeC
Confidence 88998765432 222111111 122222 66777777776 46777774
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.28 E-value=0.066 Score=45.32 Aligned_cols=105 Identities=11% Similarity=0.044 Sum_probs=56.9
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCccccccccee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++++++.|+.+ +.+..||+.+..-...... .....-.++....++. +++.|+.. ..+
T Consensus 258 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~g~~d-------------g~i 315 (420)
T 3vl1_A 258 YGKYVIAGHVS--------GVITVHNVFSKEQTIQLPS-KFTCSCNSLTVDGNNANYIYAGYEN-------------GML 315 (420)
T ss_dssp TTEEEEEEETT--------SCEEEEETTTCCEEEEECC-TTSSCEEEEEECSSCTTEEEEEETT-------------SEE
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCceeEEccc-ccCCCceeEEEeCCCCCEEEEEeCC-------------CeE
Confidence 56666666533 4688999887653222011 1111222333334455 66666653 568
Q ss_pred eEEECCCCce--EecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 224 DVFVSNEKEW--KFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 224 ~~y~~~~~~W--~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+||+.+..- ..+.. ........+...++.+++.++.+ ..+.+||+.+
T Consensus 316 ~vwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~l~s~~~d-------~~v~iw~~~~ 365 (420)
T 3vl1_A 316 AQWDLRSPECPVGEFLI-NEGTPINNVYFAAGALFVSSGFD-------TSIKLDIISD 365 (420)
T ss_dssp EEEETTCTTSCSEEEEE-STTSCEEEEEEETTEEEEEETTT-------EEEEEEEECC
T ss_pred EEEEcCCCcCchhhhhc-cCCCCceEEEeCCCCEEEEecCC-------ccEEEEeccC
Confidence 8999876542 11111 01111222333478888888877 5788888765
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.27 E-value=0.06 Score=44.72 Aligned_cols=53 Identities=8% Similarity=0.025 Sum_probs=27.4
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECC-EEEEEccCCCCCCCceeEEEeCCCC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLD-KIYAIGGQDCKTLLSSVECYDPVAH 124 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~ 124 (306)
-.+|.++..+++.+.+...+...........++ .||+.+..+ ..+.+|+....
T Consensus 77 v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 77 VSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred EEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCCC
Confidence 455777777777766654432222222222255 566654321 45777777543
No 70
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.27 E-value=0.039 Score=44.32 Aligned_cols=178 Identities=12% Similarity=0.034 Sum_probs=91.1
Q ss_pred eceEEEEeCCCCC--eeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccccceee
Q psy9754 66 SNSVWSFNPNNKQ--WTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~~~~~~ 141 (306)
...+..+|+++++ |+.-..-. ...+...+.-++.|++.+. ..+..||+ +++ |+.-.+.... .....
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~~~~~~-~~~~~ 83 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS-------KGAKMITR-DGRELWNIAAPAGCE-MQTAR 83 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECB-------SEEEEECT-TSCEEEEEECCTTCE-EEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCC-------CCEEEECC-CCCEEEEEcCCCCcc-ccccE
Confidence 4678889998886 65433211 1222223333778888421 56889999 444 6543321111 11122
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe-eEEc-ccccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-WTTL-ATKLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~-~~~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
...++.+++..... ...+..+|++-.. |+.- ......+ .....+....++.+++.....
T Consensus 84 ~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~----------- 145 (276)
T 3no2_A 84 ILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT----------- 145 (276)
T ss_dssp ECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----------
T ss_pred ECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----------
Confidence 23467776664321 2467888875442 4322 1111111 011122233456776654322
Q ss_pred ccceeeEEECCCC-ceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc--eec
Q psy9754 219 SVSDLDVFVSNEK-EWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA--WIK 284 (306)
Q Consensus 219 ~~~~~~~y~~~~~-~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~--W~~ 284 (306)
..+.+||++-+ .|+.-.. . ..+++..+ ++.+++++... ..+..+|+++++ |+.
T Consensus 146 --~~v~~~d~~G~~~w~~~~~---~-~~~~~~~~~~g~~~v~~~~~-------~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 146 --SEVREIAPNGQLLNSVKLS---G-TPFSSAFLDNGDCLVACGDA-------HCFVQLNLESNRIVRRV 202 (276)
T ss_dssp --TEEEEECTTSCEEEEEECS---S-CCCEEEECTTSCEEEECBTT-------SEEEEECTTTCCEEEEE
T ss_pred --CEEEEECCCCCEEEEEECC---C-CccceeEcCCCCEEEEeCCC-------CeEEEEeCcCCcEEEEe
Confidence 56788988722 2553221 1 11233334 78888887654 468999998554 654
No 71
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.26 E-value=0.062 Score=46.11 Aligned_cols=176 Identities=13% Similarity=0.142 Sum_probs=91.9
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
..+..||..+++-...- .........+..++..++.|+.+ ..+.+||..+.+-.. .+............++
T Consensus 219 g~i~~wd~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~ 289 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVL--MGHVAAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLH--TLQGHTNRVYSLQFDG 289 (445)
T ss_dssp SEEEEEESSSCCEEEEE--ECCSSCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEE--EECCCSSCEEEEEECS
T ss_pred CEEEEEECCCCcEEEEE--cCCcccEEEEEECCCEEEEEcCC-----CEEEEEECCCCcEeE--EecCCCCceEEEEECC
Confidence 46777888776532211 11111122333467777777654 457778877665322 1111111122233366
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEE
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVF 226 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y 226 (306)
..++.|+.+ +.+..||..+.+-....... ......+... +..++.|+.. ..+.+|
T Consensus 290 ~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~~-~~~l~~~~~d-------------g~i~vw 344 (445)
T 2ovr_B 290 IHVVSGSLD--------TSIRVWDVETGNCIHTLTGH---QSLTSGMELK-DNILVSGNAD-------------STVKIW 344 (445)
T ss_dssp SEEEEEETT--------SCEEEEETTTCCEEEEECCC---CSCEEEEEEE-TTEEEEEETT-------------SCEEEE
T ss_pred CEEEEEeCC--------CeEEEEECCCCCEEEEEcCC---cccEEEEEEe-CCEEEEEeCC-------------CeEEEE
Confidence 666666543 56889998877643221111 1112233445 5566666543 567899
Q ss_pred ECCCCceEecccCCc-ccccceeeeeCCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 227 VSNEKEWKFVTELVV-PRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 227 ~~~~~~W~~~~~~p~-~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
|+.+.+-...-..+. ......+...++.+++.|+.+ ..+.+||+.+++..
T Consensus 345 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 345 DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-------GTVKLWDLKTGEFI 395 (445)
T ss_dssp ETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT-------SEEEEEETTTCCEE
T ss_pred ECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC-------CeEEEEECCCCcee
Confidence 987665332211111 112223334477788888776 57889999887653
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.23 E-value=0.058 Score=43.71 Aligned_cols=177 Identities=7% Similarity=0.073 Sum_probs=88.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-eeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-AVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-~~~~- 143 (306)
..+..+|..+++....-.... ..-..++.. ++++++.|+.+ ..+.+||..+++-... +....... .+..
T Consensus 45 g~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~ 116 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFN 116 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEEC
T ss_pred CeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEc
Confidence 356777877766543221111 111222222 56667777654 4577888887753221 11111111 1111
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
-++.+++.|+.+ ..+..+|+.+.+-.........+ -.++....++.+++.|+.. ..+
T Consensus 117 ~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d-------------~~i 173 (312)
T 4ery_A 117 PQSNLIVSGSFD--------ESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYD-------------GLC 173 (312)
T ss_dssp SSSSEEEEEETT--------SCEEEEETTTCCEEEEECCCSSC--EEEEEECTTSSEEEEEETT-------------SCE
T ss_pred CCCCEEEEEeCC--------CcEEEEECCCCEEEEEecCCCCc--EEEEEEcCCCCEEEEEeCC-------------CcE
Confidence 244556666533 46889998877543321211111 1123333356777777654 457
Q ss_pred eEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 224 DVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 224 ~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+||+.+.+....-..........++. .+++.++.|+.+ ..+.+||..+.+
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~ 225 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-------NTLKLWDYSKGK 225 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-------TEEEEEETTTTE
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC-------CeEEEEECCCCc
Confidence 889987765432111111111111222 266777777766 578888887655
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.23 E-value=0.011 Score=49.54 Aligned_cols=231 Identities=10% Similarity=0.038 Sum_probs=96.6
Q ss_pred ceeEEecccccceeEEEEEEeecCceeeecccccccccceE--------EEEeCccCcCCCCcccceeeceEEEEeCCCC
Q psy9754 6 DWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYDVKI--------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNK 77 (306)
Q Consensus 6 ~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~~~~--------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~ 77 (306)
++.+++.|+.++... +|..+...|..+..+......... +++.|+. ...+..||..++
T Consensus 22 ~g~~l~~~~~d~~i~--iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------------d~~v~vwd~~~~ 87 (377)
T 3dwl_C 22 QRTEFVTTTATNQVE--LYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ------------DRNAYVYEKRPD 87 (377)
T ss_dssp SSSEEECCCSSSCBC--EEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET------------TSSEEEC-----
T ss_pred CCCEEEEecCCCEEE--EEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC------------CCeEEEEEcCCC
Confidence 345666666554332 444444556655554432222111 3444432 245777888776
Q ss_pred C-eeeCCCCCC-CccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCccccc--ceeeEEE-CCEEEE
Q psy9754 78 Q-WTQEPNMTY-PRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIARM--GMAVAEI-NDKIWI 150 (306)
Q Consensus 78 ~-W~~~~~~~~-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~~~--~~~~~~~-~~~iyv 150 (306)
+ |.....+.. .....+++.. ++++++.|+.+ ..+.+||..+.+ |.....+..++. -..++.. ++.+++
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred CceeeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 6 433322211 1111222222 55666666654 346677777665 322222222111 1122222 455666
Q ss_pred EcccCCCCCCCCCccEEEEeCCCCeeEEcc---------------cccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcc
Q psy9754 151 AGGYTGDKMNPVTDKVECYDPRTNTWTTLA---------------TKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 151 ~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---------------~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~ 215 (306)
.|+.+ ..+..||..+....... ........-.++....++++++.|+..
T Consensus 163 ~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------- 226 (377)
T 3dwl_C 163 AGCAD--------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD-------- 226 (377)
T ss_dssp EEESS--------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT--------
T ss_pred EEeCC--------CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC--------
Confidence 66543 45777776543321110 111111111223333356666666543
Q ss_pred cccccceeeEEECCCCce--EecccCCcccc-cceeee-eCCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 216 KMYSVSDLDVFVSNEKEW--KFVTELVVPRH-AHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W--~~~~~~p~~~~-~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+.+||+.+.+- ..+..+..... -.+++. -++++++.|+.+ .+.+|+.....|..
T Consensus 227 -----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--------~~~~~~~~~~~~~~ 286 (377)
T 3dwl_C 227 -----SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY--------SPILLQGNESGWAH 286 (377)
T ss_dssp -----TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS--------SEEEECCCC---CC
T ss_pred -----CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC--------cEEEEEeCCCceEE
Confidence 4577888776653 11222222211 122222 377877776533 35578877777755
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.035 Score=46.85 Aligned_cols=146 Identities=7% Similarity=0.033 Sum_probs=72.8
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
..+..++.|+.+ ..+.+||..+.+-.. +..... .-..++.. ++.+++.++.+ ..+..||..+.
T Consensus 215 ~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~ 279 (425)
T 1r5m_A 215 VDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGHHG--PISVLEFNDTNKLLLSASDD--------GTLRIWHGGNG 279 (425)
T ss_dssp EETTEEEEECGG-----GCEEEEETTCSSCSEEECCCSS--CEEEEEEETTTTEEEEEETT--------SCEEEECSSSB
T ss_pred cCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccCCC--ceEEEEECCCCCEEEEEcCC--------CEEEEEECCCC
Confidence 333345555543 458888988764221 111111 11122222 45555555532 46888888765
Q ss_pred eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeee-eCC
Q psy9754 175 TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSS 253 (306)
Q Consensus 175 ~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~ 253 (306)
......... ...-.++....++ +++.++.. ..+.+||+.+.+-...-..... ...+++. -++
T Consensus 280 ~~~~~~~~~--~~~i~~~~~~~~~-~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~s~~~ 342 (425)
T 1r5m_A 280 NSQNCFYGH--SQSIVSASWVGDD-KVISCSMD-------------GSVRLWSLKQNTLLALSIVDGV-PIFAGRISQDG 342 (425)
T ss_dssp SCSEEECCC--SSCEEEEEEETTT-EEEEEETT-------------SEEEEEETTTTEEEEEEECTTC-CEEEEEECTTS
T ss_pred ccceEecCC--CccEEEEEECCCC-EEEEEeCC-------------CcEEEEECCCCcEeEecccCCc-cEEEEEEcCCC
Confidence 432220111 1112233444445 55555543 5688999876653322211111 1112222 267
Q ss_pred EEEEEeCccCccccccceEEEeeccccc
Q psy9754 254 QILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 254 ~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.++++|+.+ ..+.+||..+.+
T Consensus 343 ~~l~~~~~d-------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 343 QKYAVAFMD-------GQVNVYDLKKLN 363 (425)
T ss_dssp SEEEEEETT-------SCEEEEECHHHH
T ss_pred CEEEEEECC-------CeEEEEECCCCc
Confidence 788887766 478899987765
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.055 Score=43.57 Aligned_cols=147 Identities=10% Similarity=0.157 Sum_probs=74.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT 177 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 177 (306)
++..++.|+.+ ..+.+||..... ..+..............-++. ++.|+.+ +.+..||..+.+-.
T Consensus 154 ~~~~l~~~~~d-----~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~d--------g~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASAD-----KTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSND--------GLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETT-----SCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETT--------SEEEEEETTTCCEE
T ss_pred CCCEEEEEECC-----CCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCC--------CeEEEEECCchhhh
Confidence 55666666644 346677732211 122211111122222234666 5555432 57889998876533
Q ss_pred EcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEEE
Q psy9754 178 TLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQIL 256 (306)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~ 256 (306)
...... .. .-.++....+++ ++.|+.. ..+.+||+.+.+....-..+.... .+++.. +++ +
T Consensus 219 ~~~~~~-~~-~i~~~~~~~~~~-l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~ 280 (313)
T 3odt_A 219 RTYEGH-ES-FVYCIKLLPNGD-IVSCGED-------------RTVRIWSKENGSLKQVITLPAISI-WSVDCMSNGD-I 280 (313)
T ss_dssp EEEECC-SS-CEEEEEECTTSC-EEEEETT-------------SEEEEECTTTCCEEEEEECSSSCE-EEEEECTTSC-E
T ss_pred hhhhcC-Cc-eEEEEEEecCCC-EEEEecC-------------CEEEEEECCCCceeEEEeccCceE-EEEEEccCCC-E
Confidence 220111 11 112333334454 4455443 568999988776543333222221 222222 666 5
Q ss_pred EEeCccCccccccceEEEeeccccceec
Q psy9754 257 IIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 257 v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
+.++.+ ..+.+||++++++..
T Consensus 281 ~~~~~d-------g~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 281 IVGSSD-------NLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEEETT-------SCEEEEESCGGGCCC
T ss_pred EEEeCC-------CcEEEEeCCCCceee
Confidence 556665 579999999999866
No 76
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.18 E-value=0.031 Score=45.73 Aligned_cols=179 Identities=7% Similarity=-0.024 Sum_probs=90.8
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcE-E-eccCCcccccceee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTW-E-DVAPLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w-~-~~~~~~~~~~~~~~ 141 (306)
...+..||+.+++....-..+.. ...++.. ++ .+|+.+..+ ..++++|+.+++. . .+.....+ .+++
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~--~~~~ 89 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQEGQSS--MADV 89 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEECSSC--CCCE
T ss_pred CCeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEecccCCCC--ccce
Confidence 46789999999887554333322 2233332 44 577775532 4789999988874 2 22221111 1112
Q ss_pred EEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCccccc
Q psy9754 142 AEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~ 218 (306)
+.. +..+| ++..... ...+.++|+.+.+....... ......++...++ .+|+.+...
T Consensus 90 ~~s~dg~~l~-~~~~~~~-----~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~----------- 149 (331)
T 3u4y_A 90 DITPDDQFAV-TVTGLNH-----PFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLILIDRSS----------- 149 (331)
T ss_dssp EECTTSSEEE-ECCCSSS-----SCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEEEEETT-----------
T ss_pred EECCCCCEEE-EecCCCC-----cccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEEEecCC-----------
Confidence 222 34566 3321110 13799999998876443121 1122344444455 477765432
Q ss_pred ccce-eeEEECCCCc-eEec--ccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeeccccce
Q psy9754 219 SVSD-LDVFVSNEKE-WKFV--TELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 219 ~~~~-~~~y~~~~~~-W~~~--~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.. +.+|+++.+. .... ..++....-..++.- +++ +|+.+... ..+.+||+++++.
T Consensus 150 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 --ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG-------NSIGILETQNPEN 210 (331)
T ss_dssp --TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT-------TEEEEEECSSTTS
T ss_pred --CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC-------CeEEEEECCCCcc
Confidence 23 6677665432 1111 111111112233332 554 77766444 5788999987765
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.16 E-value=0.029 Score=52.16 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=85.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCC-cEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAH-TWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~-~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+..||..+++....-... ...-.+++.. ++..++.|+.+ ..+.+||..++ .....-. .....-..++..
T Consensus 77 g~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~ 149 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAH-PDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQTFE-GHEHFVMCVAFN 149 (814)
T ss_dssp SEEEEEETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecC-CCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEEEc-CCCCcEEEEEEE
Confidence 46788888887653321111 1112222222 45555555543 45777888765 2221111 111111222333
Q ss_pred --CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCccccccc
Q psy9754 145 --NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 145 --~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
++.+++.|+.+ ..+..||..+..-...... ........+.... ++..++.|+..
T Consensus 150 p~~~~~l~~~~~d--------g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d------------- 207 (814)
T 3mkq_A 150 PKDPSTFASGCLD--------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDD------------- 207 (814)
T ss_dssp TTEEEEEEEEETT--------SEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECTT-------------
T ss_pred cCCCCEEEEEeCC--------CeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeCC-------------
Confidence 35566666533 4688888765542211011 1111111222322 46777777654
Q ss_pred ceeeEEECCCCceEecccCCcccccc-eeee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAH-SASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||..+.+-. ..+....... +++. -++.+++.|+.+ ..+.+||+.+.+
T Consensus 208 g~i~~~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~v~vwd~~~~~ 261 (814)
T 3mkq_A 208 LTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLPIIISGSED-------GTLKIWNSSTYK 261 (814)
T ss_dssp SEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTCS
T ss_pred CEEEEEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 56788988765532 2221111111 2222 266777777766 467788877644
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.15 E-value=0.027 Score=46.72 Aligned_cols=183 Identities=14% Similarity=0.108 Sum_probs=89.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCc-cceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccceeeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPR-KIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~~~ 143 (306)
..+..||..+++++.+..+.... .-.+++.. ++++++.|+.+ ..+.+||..++++.....+. ....-..+..
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 56788888888765554433222 22233333 56666666644 45778888888765443322 1111112222
Q ss_pred E-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe-eEEcccc-cCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccc
Q psy9754 144 I-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-WTTLATK-LRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 ~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~-~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
. ++.+++.|+.+ +.+..||..+.. |...... .+....-.++....++..++.|+..
T Consensus 105 ~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------------- 163 (372)
T 1k8k_C 105 APNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD------------- 163 (372)
T ss_dssp CTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------------
T ss_pred CCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------------
Confidence 2 45556666533 346666655543 3222011 1111122233333456677776653
Q ss_pred ceeeEEECCCCc----------------eEecccCCccccc-ceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 221 SDLDVFVSNEKE----------------WKFVTELVVPRHA-HSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 221 ~~~~~y~~~~~~----------------W~~~~~~p~~~~~-~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.... -+.+..+...... .+++.. ++..++.++.+ ..+.+||.++.+-
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-------STVCLADADKKMA 236 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-------TEEEEEEGGGTTE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-------CEEEEEECCCCce
Confidence 456788854211 1111122111111 122222 66677777766 4688888876653
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.04 Score=51.13 Aligned_cols=184 Identities=14% Similarity=0.196 Sum_probs=91.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCcc-ceeeEEE-C--CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRK-IFSFVSC-L--DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~ 141 (306)
..+..+|..+++|..+..+..... -.+++.. + +.+++.|+.+ ..+.+||..++.-.....+. ....-..+
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 457778888887755543332222 2222222 3 6677777654 45777887766321111110 01011111
Q ss_pred EEE--------------CCEEEEEcccCCCCCCCCCccEEEEeCCCC--eeEEcccccCC-cceeEEEEEEeC---CEEE
Q psy9754 142 AEI--------------NDKIWIAGGYTGDKMNPVTDKVECYDPRTN--TWTTLATKLRY-PRYLATLVSVNN---EKLY 201 (306)
Q Consensus 142 ~~~--------------~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~-~~~~~~~~~~~~---~~iy 201 (306)
+.. ++.+++.|+.+ +.+..||..+. .+... ..+.. ...-.++....+ +.++
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~d--------g~I~iwd~~~~~~~~~~~-~~~~~h~~~V~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLE-STLEGHSDWVRDVAWSPTVLLRSYL 222 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETT--------SCEEEEEEETTTTEEEEE-EEECCCSSCEEEEEECCCCSSSEEE
T ss_pred EecCcccccccccccCCCCCEEEEEECC--------CeEEEEeccCCcccceee-eeecCCCCcEEEEEeccCCCCCCEE
Confidence 111 24556666543 45677776544 34333 21111 111223334444 6777
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCCc--eE-ecccCC-cccccceeee-eCCEEEEEeCccCccccccceEEEee
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEKE--WK-FVTELV-VPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWC 276 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~-~~~~~p-~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd 276 (306)
+.|+.. ..+.+||+.+.. +. .+.... ......+++. .++..++.|+.+ ..+.+||
T Consensus 223 ~s~s~D-------------g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D-------g~I~vwd 282 (753)
T 3jro_A 223 ASVSQD-------------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-------NKVTLWK 282 (753)
T ss_dssp EEEESS-------------SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS-------SCEECCB
T ss_pred EEEecC-------------CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC-------CEEEEEe
Confidence 777764 457888887643 11 111111 1111122222 277888888876 5688999
Q ss_pred cc-ccceec
Q psy9754 277 FD-RQAWIK 284 (306)
Q Consensus 277 ~~-~~~W~~ 284 (306)
.. ..+|..
T Consensus 283 ~~~~~~~~~ 291 (753)
T 3jro_A 283 ENLEGKWEP 291 (753)
T ss_dssp CCSSSCCBC
T ss_pred cCCCCCccc
Confidence 87 566766
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.14 E-value=0.015 Score=50.00 Aligned_cols=176 Identities=14% Similarity=0.168 Sum_probs=90.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
..+..||..+.+-...- .........+..++.+++.|+.+ ..+.++|..+++.... +............++
T Consensus 153 g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 153 NTIKIWDKNTLECKRIL--TGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNN 223 (435)
T ss_dssp SCEEEEESSSCCEEEEE--CCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEE--ECCCCSCEEEEECCT
T ss_pred CeEEEEeCCCCeEEEEE--cCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcC
Confidence 46788888776543221 11111122233377777777755 4577889887764322 111111122222344
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEE
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVF 226 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y 226 (306)
..++.|+.+ +.+..+|..+..-................+... +..++.|+.. ..+.+|
T Consensus 224 ~~l~s~s~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~s~~~d-------------g~i~vw 281 (435)
T 1p22_A 224 GMMVTCSKD--------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIVSASGD-------------RTIKVW 281 (435)
T ss_dssp TEEEEEETT--------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-TTEEEEEETT-------------SEEEEE
T ss_pred CEEEEeeCC--------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-CCEEEEEeCC-------------CeEEEE
Confidence 455555533 567888887654221101111111122233345 5566666543 567899
Q ss_pred ECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 227 VSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 227 ~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
|+.+.+-.. .+........+...++.+++.|+.+ ..+.+||+++++-
T Consensus 282 d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~g~~d-------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 282 NTSTCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-------NTIRLWDIECGAC 328 (435)
T ss_dssp ETTTCCEEE--EEECCSSCEEEEEEETTEEEEEETT-------SCEEEEETTTCCE
T ss_pred ECCcCcEEE--EEcCCCCcEEEEEeCCCEEEEEeCC-------CeEEEEECCCCCE
Confidence 987765332 2221212223334467778888766 4688999876543
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.13 E-value=0.057 Score=50.27 Aligned_cols=177 Identities=10% Similarity=0.094 Sum_probs=101.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCC-ccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc---cccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYP-RKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI---ARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~---~~~~~~~ 141 (306)
..+++||+.+++++.......+ ....+++.- ++.||+... .-+++||+.+++|+....... .......
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 4678888888888776532111 112223222 578888632 348889999988876643220 0111111
Q ss_pred EE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCccee-EEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYL-ATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
.. .++.|++..- ...+.+||+++.+++........+... .+++...++.|++...
T Consensus 500 i~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~------------- 557 (781)
T 3v9f_A 500 IAQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG------------- 557 (781)
T ss_dssp EEECTTCCEEEEES---------SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-------------
T ss_pred EEEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-------------
Confidence 12 2577887531 145889999999988873221122211 2333334578888543
Q ss_pred cccee-eEEECCCCceEeccc---CCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 219 SVSDL-DVFVSNEKEWKFVTE---LVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 219 ~~~~~-~~y~~~~~~W~~~~~---~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+ .+||+.+++++.... +|.... .+++.- ++.|++.+. +.+.+||+++.+++.
T Consensus 558 --~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~---------~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 558 --EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN---------TGISCYITSKKCFYT 616 (781)
T ss_dssp --TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS---------SCEEEEETTTTEEEE
T ss_pred --CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC---------CceEEEECCCCceEE
Confidence 234 788888888776542 333222 233332 677877642 347788888877755
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.09 E-value=0.04 Score=46.68 Aligned_cols=180 Identities=15% Similarity=0.144 Sum_probs=92.4
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
...+..||..+++............-.+++.. ++.+++.|+.+ ..+.+||..+++....- ............
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~--~~~~~~v~~~~~ 184 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTM--AGHQARVGCLSW 184 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEE--CCCSSCEEEEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEe--cCCCCceEEEEE
Confidence 35688999998876554433322222333333 56666666644 45788898877643221 111111222233
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
++.+++.|+.+ +.+..+|..+.. -..+ ... ...-.++....++.+++.|+.. ..
T Consensus 185 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~-~~~--~~~v~~~~~~~~~~~l~s~~~d-------------~~ 240 (401)
T 4aez_A 185 NRHVLSSGSRS--------GAIHHHDVRIANHQIGTL-QGH--SSEVCGLAWRSDGLQLASGGND-------------NV 240 (401)
T ss_dssp ETTEEEEEETT--------SEEEEEETTSSSCEEEEE-ECC--SSCEEEEEECTTSSEEEEEETT-------------SC
T ss_pred CCCEEEEEcCC--------CCEEEEecccCcceeeEE-cCC--CCCeeEEEEcCCCCEEEEEeCC-------------Ce
Confidence 55566666533 568888887432 2222 111 1111233333356777777654 56
Q ss_pred eeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 223 LDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+.+||+.+..-...-. .....-.+++.. +..+++.|+.... ..+.+||..+++-
T Consensus 241 v~iwd~~~~~~~~~~~-~~~~~v~~~~~~p~~~~ll~~~~gs~d-----~~i~i~d~~~~~~ 296 (401)
T 4aez_A 241 VQIWDARSSIPKFTKT-NHNAAVKAVAWCPWQSNLLATGGGTMD-----KQIHFWNAATGAR 296 (401)
T ss_dssp EEEEETTCSSEEEEEC-CCSSCCCEEEECTTSTTEEEEECCTTT-----CEEEEEETTTCCE
T ss_pred EEEccCCCCCccEEec-CCcceEEEEEECCCCCCEEEEecCCCC-----CEEEEEECCCCCE
Confidence 7889987654321111 111111222222 4567777652111 5788888876654
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.02 E-value=0.016 Score=48.37 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=75.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
+++.++.|+.+ ..+.++|..+++-...-..... .-..++.. ++.+++.++.+ ..+..+|+.+.+
T Consensus 150 dg~~l~sgs~d-----g~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~~~~ 215 (357)
T 4g56_B 150 DGTQAVSGGKD-----FSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGED--------GRILLWDTRKPK 215 (357)
T ss_dssp SSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETT--------SCEEECCTTSSS
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccC--------CceEEEECCCCc
Confidence 56777777755 3477889888764322111111 11122222 23456666533 457888887765
Q ss_pred eEEcccccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccccc-ceeee-e
Q psy9754 176 WTTLATKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHA-HSASV-L 251 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~-~~~~~-~ 251 (306)
-... ............+... ++.+++.|+.. ..+.+||+.+.+-. ..+...... .+++. .
T Consensus 216 ~~~~-~~~~~~~~~v~~v~~sp~~~~~la~g~~d-------------~~i~~wd~~~~~~~--~~~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 216 PATR-IDFCASDTIPTSVTWHPEKDDTFACGDET-------------GNVSLVNIKNPDSA--QTSAVHSQNITGLAYSY 279 (357)
T ss_dssp CBCB-CCCTTCCSCEEEEEECTTSTTEEEEEESS-------------SCEEEEESSCGGGC--EEECCCSSCEEEEEECS
T ss_pred eeee-eeeccccccccchhhhhcccceEEEeecc-------------cceeEEECCCCcEe--EEEeccceeEEEEEEcC
Confidence 3332 1111111122233332 25677777653 45788888765421 111111111 12222 2
Q ss_pred CC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 252 SS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 252 ~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++ ++++.|+.+ ..+.+||.++++-..
T Consensus 280 ~~~~~lasgs~D-------~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 280 HSSPFLASISED-------CTVAVLDADFSEVFR 306 (357)
T ss_dssp SSSCCEEEEETT-------SCEEEECTTSCEEEE
T ss_pred CCCCEEEEEeCC-------CEEEEEECCCCcEeE
Confidence 44 566667666 468899988776543
No 84
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.02 E-value=0.11 Score=42.92 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=75.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
++.+ +.|+.+ ..+.+||..+++-...-.. ....-..++.. ++.+++.|+.+ ..+..+|+.+..-
T Consensus 154 ~~~l-~s~s~d-----~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~~~~ 218 (340)
T 1got_B 154 DNQI-VTSSGD-----TTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGACD--------ASAKLWDVREGMC 218 (340)
T ss_dssp TTEE-EEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCSE
T ss_pred CCcE-EEEECC-----CcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEEEeCC--------CcEEEEECCCCee
Confidence 5554 444433 4577889887764321110 11111122222 45667776643 4678889887654
Q ss_pred EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccc-eeee-eCCE
Q psy9754 177 TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAH-SASV-LSSQ 254 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~~-~~~~ 254 (306)
........ . .-.+++...++.+++.|+.. ..+.+||+.+..-...-..+...... +++. .+++
T Consensus 219 ~~~~~~h~-~-~v~~v~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 219 RQTFTGHE-S-DINAICFFPNGNAFATGSDD-------------ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp EEEECCCS-S-CEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred EEEEcCCc-C-CEEEEEEcCCCCEEEEEcCC-------------CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 33201111 1 11233344457777777654 45788998765432111111111111 2222 2778
Q ss_pred EEEEeCccCccccccceEEEeeccccc
Q psy9754 255 ILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 255 i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+++.|+.+ ..+.+||..+.+
T Consensus 284 ~l~~g~~d-------~~i~vwd~~~~~ 303 (340)
T 1got_B 284 LLLAGYDD-------FNCNVWDALKAD 303 (340)
T ss_dssp EEEEEETT-------SEEEEEETTTCC
T ss_pred EEEEECCC-------CeEEEEEcccCc
Confidence 88888776 578899976543
No 85
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.02 E-value=0.097 Score=42.40 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=83.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~~~~ 144 (306)
..+..+|..+++-...-. .....-.+++.. ++.+++.|+.+ ..+.++|..++.- ....+. ....-..++..
T Consensus 77 ~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWA-LEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTTE-EEEEECCCCSCEEEEEEC
T ss_pred CEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCcc-hhhhhcccCCcEEEEEEC
Confidence 467788887765321100 011112223332 45666666654 4466777765421 111111 11111122222
Q ss_pred --CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE-EcccccCCcceeEEEEEE--eCCEEEEEcCCCCCCCCCcccccc
Q psy9754 145 --NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT-TLATKLRYPRYLATLVSV--NNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 145 --~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~~~~~~~~~~~--~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
++.+++.|+.+ ..+..+|+.+..-. .+... ..+........ .++.+++.|+..
T Consensus 150 p~~~~~l~sgs~D--------~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D------------ 207 (304)
T 2ynn_A 150 PKDPSTFASGCLD--------RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDD------------ 207 (304)
T ss_dssp TTCTTEEEEEETT--------SEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETT------------
T ss_pred CCCCCEEEEEeCC--------CeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCC------------
Confidence 34566666644 46778887654311 11011 11111111111 235566666543
Q ss_pred cceeeEEECCCCceEecccCCcccccceeee--eCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASV--LSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+-. ..+.........+. -++.+++.|+.+ ..+.+||.++.+-
T Consensus 208 -~~i~iWd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~s~D-------g~i~iWd~~~~~~ 262 (304)
T 2ynn_A 208 -LTIKIWDYQTKSCV--ATLEGHMSNVSFAVFHPTLPIIISGSED-------GTLKIWNSSTYKV 262 (304)
T ss_dssp -SEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTCCE
T ss_pred -CeEEEEeCCCCccc--eeeCCCCCCEEEEEECCCCCEEEEEcCC-------CeEEEEECCCCce
Confidence 56888988765422 22221111112222 266777788777 5788999887654
No 86
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.02 E-value=0.11 Score=42.80 Aligned_cols=192 Identities=13% Similarity=0.116 Sum_probs=102.2
Q ss_pred ceEEEEeCCCCCeeeC-CCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCC--cEEeccCC------cccc
Q psy9754 67 NSVWSFNPNNKQWTQE-PNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAH--TWEDVAPL------KIAR 136 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~-~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~--~w~~~~~~------~~~~ 136 (306)
..++++|+.+++.... ..-.... -..++.. ++.||+..... ..+.+||+... .-..+... ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~-p~gia~d~~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYL-PHGLSIDTDGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSS-EEEEEECTTSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCC-ceEEEECCCCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 4799999988775432 1111111 1223332 67899886532 56888998765 22222211 0111
Q ss_pred -cceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc------CCcce-eEEEEEEeC-CEEEEEcC
Q psy9754 137 -MGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL------RYPRY-LATLVSVNN-EKLYIIGG 205 (306)
Q Consensus 137 -~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~------~~~~~-~~~~~~~~~-~~iyi~GG 205 (306)
.-..+++. ++.||+..+.. ...+.+||+....-..+.... +.... -.+++...+ +.||+...
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSS-------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 12233443 68999987522 367899996554444431110 01111 223444444 89999875
Q ss_pred CCCCCCCCcccccccceeeEEECCCCceEecccCC-cccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 206 ASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELV-VPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
.+ ..+.+|++++.+....-..+ ....-.+++...+.+|...|...........+.+||+.+++...
T Consensus 216 ~~-------------~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 216 EN-------------GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp TT-------------TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred CC-------------CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 43 57899999866655332211 11112233333477777777543222233578899988777654
No 87
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.01 E-value=0.069 Score=43.20 Aligned_cols=185 Identities=10% Similarity=-0.007 Sum_probs=94.5
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc----ccccee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI----ARMGMA 140 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~----~~~~~~ 140 (306)
...+++||+.+++-..... + ..-.+++.. ++++|+... ..+++||+.+++++.+..... .+....
T Consensus 34 ~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 3678999998876543321 1 111223333 567766532 568899999998887654321 111122
Q ss_pred eEEECCEEEEEcccCCCC---CCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCccc
Q psy9754 141 VAEINDKIWIAGGYTGDK---MNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQK 216 (306)
Q Consensus 141 ~~~~~~~iyv~GG~~~~~---~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~ 216 (306)
++.-+++||+..-..... .......++++|+.. +...+......+ .+++...++ .+|+.....
T Consensus 104 ~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~lyv~~~~~--------- 170 (297)
T 3g4e_A 104 KVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIFYYIDSLS--------- 170 (297)
T ss_dssp EECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEEEEEEGGG---------
T ss_pred EECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEEEEecCCC---------
Confidence 222367888753211100 001135788998763 333331222222 233333344 577765432
Q ss_pred ccccceeeEEEC--CCCceE---ecccCCcc-cccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 217 MYSVSDLDVFVS--NEKEWK---FVTELVVP-RHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 217 ~~~~~~~~~y~~--~~~~W~---~~~~~p~~-~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+++|+. .+.... .+..++.. ..-.+++.- +++||+..... ..+.+||+++++-..
T Consensus 171 ----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-------~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 171 ----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-------GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-------TEEEEECTTTCCEEE
T ss_pred ----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-------CEEEEEcCCCceEEE
Confidence 56778876 444432 11222211 111233332 67888875333 468899998766533
No 88
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.00 E-value=0.11 Score=46.40 Aligned_cols=224 Identities=13% Similarity=0.000 Sum_probs=108.2
Q ss_pred ceeEEecccccceeEEEEEEeecCceeeecccccccccceE--------EEEeCccCcCCCCcccceeeceEEEEeCC--
Q psy9754 6 DWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYDVKI--------NSLAGGVDPSSDEKTTDIVSNSVWSFNPN-- 75 (306)
Q Consensus 6 ~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~~~~--------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~-- 75 (306)
++.+||.....+ .+..+|..+.+.+..++.....|.+ +|+.+. ...+..||+.
T Consensus 166 ~~~~~V~~~~~~----~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~-------------dg~V~viD~~~~ 228 (567)
T 1qks_A 166 ENLFSVTLRDAG----QIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR-------------DGKVNMIDLWMK 228 (567)
T ss_dssp GGEEEEEETTTT----EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET-------------TSEEEEEETTSS
T ss_pred CceEEEEeCCCC----eEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC-------------CCeEEEEECCCC
Confidence 345666554333 3557777665555555544333333 666431 2569999985
Q ss_pred CCCeeeCCCCCCCccceeeEEE-----CC-EEEEEccCCCCCCCceeEEEeCCCCcEEe-ccC--C--------cccccc
Q psy9754 76 NKQWTQEPNMTYPRKIFSFVSC-----LD-KIYAIGGQDCKTLLSSVECYDPVAHTWED-VAP--L--------KIARMG 138 (306)
Q Consensus 76 t~~W~~~~~~~~~~~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~--~--------~~~~~~ 138 (306)
+.+ .+...+....-..++.. ++ .+|+..-. ...+.++|..+.+-.+ ++. + +.+|..
T Consensus 229 t~~--~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 229 EPT--TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp SCC--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred CCc--EeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceE
Confidence 443 23333322222233333 44 66666432 2567788877765332 221 1 111222
Q ss_pred eeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 139 MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 139 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
......++..+++.-.. .+.+...|..+.....+ ...+..+.-+......+++.+++....
T Consensus 302 ~i~~s~~~~~~vv~~~~-------~g~v~~vd~~~~~~~~v-~~i~~~~~~~d~~~~pdgr~~~va~~~----------- 362 (567)
T 1qks_A 302 AILASHYRPEFIVNVKE-------TGKILLVDYTDLNNLKT-TEISAERFLHDGGLDGSHRYFITAANA----------- 362 (567)
T ss_dssp EEEECSSSSEEEEEETT-------TTEEEEEETTCSSEEEE-EEEECCSSEEEEEECTTSCEEEEEEGG-----------
T ss_pred EEEEcCCCCEEEEEecC-------CCeEEEEecCCCcccee-eeeeccccccCceECCCCCEEEEEeCC-----------
Confidence 22222233334332111 46788888776654444 333344444454444445544443221
Q ss_pred ccceeeEEECCCCceEec----ccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 219 SVSDLDVFVSNEKEWKFV----TELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~----~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+.+.++|.++.+-... ...|.+........- .+.+|+.+-... ..|-++|.++
T Consensus 363 -sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~------~~Vsvid~~~ 421 (567)
T 1qks_A 363 -RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD------DSVALIGTDP 421 (567)
T ss_dssp -GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS------SEEEEEECCT
T ss_pred -CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC------CeEEEecCCC
Confidence 26788899988764422 222332112111122 356777653221 3577777765
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.027 Score=47.58 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=64.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~ 144 (306)
..+..||..+++-...-.... .....++.. ++++++.|+.+ ..+.+||..+.+... +.. ....-..++..
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~ 298 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCFYG--HSQSIVSASWV 298 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS-SCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEECC--CSSCEEEEEEE
T ss_pred CeEEEEEcCCCceeeeeccCC-CceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEecC--CCccEEEEEEC
Confidence 568888887754321111111 112223333 55566666643 357778877654221 111 11111223333
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++ +++.++.+ ..+..||+.+.+-... ...... .-.++....++.+++.++.. ..+
T Consensus 299 ~~~-~l~~~~~d--------~~i~i~d~~~~~~~~~-~~~~~~-~i~~~~~s~~~~~l~~~~~d-------------g~i 354 (425)
T 1r5m_A 299 GDD-KVISCSMD--------GSVRLWSLKQNTLLAL-SIVDGV-PIFAGRISQDGQKYAVAFMD-------------GQV 354 (425)
T ss_dssp TTT-EEEEEETT--------SEEEEEETTTTEEEEE-EECTTC-CEEEEEECTTSSEEEEEETT-------------SCE
T ss_pred CCC-EEEEEeCC--------CcEEEEECCCCcEeEe-cccCCc-cEEEEEEcCCCCEEEEEECC-------------CeE
Confidence 45 55555432 5788999887764333 111111 11233333456677776643 456
Q ss_pred eEEECCCCc
Q psy9754 224 DVFVSNEKE 232 (306)
Q Consensus 224 ~~y~~~~~~ 232 (306)
.+||+.+..
T Consensus 355 ~i~~~~~~~ 363 (425)
T 1r5m_A 355 NVYDLKKLN 363 (425)
T ss_dssp EEEECHHHH
T ss_pred EEEECCCCc
Confidence 778776443
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.97 E-value=0.12 Score=42.61 Aligned_cols=158 Identities=12% Similarity=0.050 Sum_probs=75.2
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCC-CcEE-eccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVA-HTWE-DVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~-~~w~-~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
+++.++.|+.+ ..+.+||..+ ..-. .+...... -..++.. ++.+++.++.+ +.+..||..+.
T Consensus 186 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~ 250 (369)
T 3zwl_B 186 KGKYIIAGHKD-----GKISKYDVSNNYEYVDSIDLHEKS--ISDMQFSPDLTYFITSSRD--------TNSFLVDVSTL 250 (369)
T ss_dssp GGCEEEEEETT-----SEEEEEETTTTTEEEEEEECCSSC--EEEEEECTTSSEEEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEeEEEEecCCCc--eeEEEECCCCCEEEEecCC--------ceEEEEECCCC
Confidence 45566666543 4688899887 3322 22211111 1122222 45555555432 56889998877
Q ss_pred eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCc-ccccccceeeEEECCCCceEecccCCcccccceeeee--
Q psy9754 175 TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNT-QKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-- 251 (306)
Q Consensus 175 ~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~-~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-- 251 (306)
+.... ..... ....++...++..+++++......... ........+.+||..+.+-.. .+.........+.+
T Consensus 251 ~~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 251 QVLKK-YETDC--PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG--RVQGHFGPLNTVAISP 325 (369)
T ss_dssp CEEEE-EECSS--CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEE--EEECCSSCEEEEEECT
T ss_pred ceeee-ecCCC--CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchh--heecccCcEEEEEECC
Confidence 65443 12111 112333334456656655432110000 000001257778876654221 11111111122222
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++++++.|+.+ ..+.+|+++++..
T Consensus 326 ~~~~l~s~~~d-------g~v~iw~~~~~~~ 349 (369)
T 3zwl_B 326 QGTSYASGGED-------GFIRLHHFEKSYF 349 (369)
T ss_dssp TSSEEEEEETT-------SEEEEEEECHHHH
T ss_pred CCCEEEEEcCC-------CeEEEEECccccc
Confidence 77888888877 5788999987665
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.97 E-value=0.071 Score=45.06 Aligned_cols=185 Identities=10% Similarity=0.019 Sum_probs=88.9
Q ss_pred ceEEEEeCCCCCeee-----CCCCCC-CccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccC-Cccccc
Q psy9754 67 NSVWSFNPNNKQWTQ-----EPNMTY-PRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP-LKIARM 137 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~-----~~~~~~-~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~-~~~~~~ 137 (306)
..+..||..++.... +..+.. ...-.+++.. ++ .+++.|+.+ ..+.+||..+++....-. ......
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSC
T ss_pred CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCc
Confidence 457788887764421 111111 1111222223 33 466676654 457889998876432211 111111
Q ss_pred ceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccc
Q psy9754 138 GMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQK 216 (306)
Q Consensus 138 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~ 216 (306)
-..++.. ++.+++.|+.+ +.+.+||+.+.+-...............++...++++++.|.....
T Consensus 179 v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~------- 243 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRD--------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS------- 243 (402)
T ss_dssp EEEEEECTTSSCEEEEETT--------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC-------
T ss_pred eEEEEECCCCCEEEEEecC--------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC-------
Confidence 1122222 55666666533 5789999988764333111111111123444456888777622111
Q ss_pred ccccceeeEEECCCCce-EecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccc
Q psy9754 217 MYSVSDLDVFVSNEKEW-KFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W-~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
-..+.+||+.+..- .....+........++.. ++ .+++.|+.+ ..+.+||..+.+
T Consensus 244 ---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d-------g~i~i~d~~~~~ 301 (402)
T 2aq5_A 244 ---ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD-------SSIRYFEITSEA 301 (402)
T ss_dssp ---CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC-------SCEEEEEECSST
T ss_pred ---CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC-------CeEEEEEecCCC
Confidence 16788999876442 111111111112222322 44 455566555 467888887655
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.95 E-value=0.007 Score=50.70 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccc-eeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCcccccce-eeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKI-FSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIARMGM-AVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~~~~~-~~~ 142 (306)
..+..||..++.|+.+..+...... .+++.. ++++++.|+.+ ..+.+||..++. |.....+....... .++
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 107 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVLLRLNRAATFVR 107 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEECCCCSSCEEEEE
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEecccCCceEEEE
Confidence 4566677777777776655433222 223333 56666777654 347778888776 44332222111111 222
Q ss_pred EE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe-eEEcccccCC--cceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 143 EI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-WTTLATKLRY--PRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 143 ~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~--~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
.. ++++++.|+.+ ..+..||..+.+ |... ..+.. ...-.++....++++++.|+..
T Consensus 108 ~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----------- 167 (377)
T 3dwl_C 108 WSPNEDKFAVGSGA--------RVISVCYFEQENDWWVS-KHLKRPLRSTILSLDWHPNNVLLAAGCAD----------- 167 (377)
T ss_dssp CCTTSSCCEEEESS--------SCEEECCC-----CCCC-EEECSSCCSCEEEEEECTTSSEEEEEESS-----------
T ss_pred ECCCCCEEEEEecC--------CeEEEEEECCcccceee-eEeecccCCCeEEEEEcCCCCEEEEEeCC-----------
Confidence 22 45555555533 457788877665 3222 11111 1122233333456777777654
Q ss_pred ccceeeEEECCCCceE----------------ecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 219 SVSDLDVFVSNEKEWK----------------FVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~----------------~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+...... .+..+.....-.+++.. ++++++.|+.+ ..+.+||..+.+
T Consensus 168 --~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------~~i~iwd~~~~~ 238 (377)
T 3dwl_C 168 --RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD-------SSVTIAYPSAPE 238 (377)
T ss_dssp --SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT-------TEEC-CEECSTT
T ss_pred --CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC-------CcEEEEECCCCC
Confidence 45677877533311 11122111111122222 67777777766 467788887654
Q ss_pred e
Q psy9754 282 W 282 (306)
Q Consensus 282 W 282 (306)
-
T Consensus 239 ~ 239 (377)
T 3dwl_C 239 Q 239 (377)
T ss_dssp S
T ss_pred C
Confidence 3
No 93
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.90 E-value=0.13 Score=47.95 Aligned_cols=175 Identities=8% Similarity=0.157 Sum_probs=98.5
Q ss_pred ceEEEEeCCCCCeeeCCCCC--CC-ccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC----cccccc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT--YP-RKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL----KIARMG 138 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~--~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~----~~~~~~ 138 (306)
..+++||+.++++....... .+ ....+++.- ++.||+... .-+++||+.+++++..... ......
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCce
Confidence 45788888888876654311 11 111222222 567887643 3478899999999877532 111111
Q ss_pred eeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc--c-cCCcc-eeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 139 MAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT--K-LRYPR-YLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 139 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~-~~~~~-~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
..... .++.|++... ..+.+||+++.++ .... . ...+. .-.+++...++.|++...
T Consensus 500 i~~i~~d~~g~lWigt~----------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------- 561 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE----------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR------- 561 (795)
T ss_dssp EEEEEECTTCCEEEEES----------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------
T ss_pred EEEEEECCCCCEEEEeC----------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------
Confidence 11122 2578888542 3588999988888 4411 1 11111 122333334578887532
Q ss_pred CcccccccceeeEEECCCCceEeccc---CCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTE---LVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~---~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+.+||+.+++++.... +|.... .+++.- ++.|++... +.+.+||+++++++.
T Consensus 562 --------~Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~---------~Gl~~~~~~~~~~~~ 619 (795)
T 4a2l_A 562 --------EGFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN---------RGISCFNPETEKFRN 619 (795)
T ss_dssp --------SCEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET---------TEEEEEETTTTEEEE
T ss_pred --------CCceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC---------CceEEEcCCCCcEEE
Confidence 236899999888876542 332221 222222 577887652 357789998888765
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.068 Score=44.05 Aligned_cols=183 Identities=10% Similarity=0.018 Sum_probs=86.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~ 144 (306)
..+..||..+++-...-..... .-.+++.. +++.++.++.+ ..+.+||..+.+....-...... ..++. -
T Consensus 54 g~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~v--~~~~~~~ 125 (369)
T 3zwl_B 54 SSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVATWKSPVPV--KRVEFSP 125 (369)
T ss_dssp SCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECSSCE--EEEEECT
T ss_pred CEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEEeecCCCe--EEEEEcc
Confidence 4577888877654322111111 11222222 45666666644 46888898877644332222111 12222 2
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe----eEEcccccCC-------c-ceeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT----WTTLATKLRY-------P-RYLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~-------~-~~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
++..++.++...... ...+..||..+.. +... ...+. . .....+....+++.++.|+..
T Consensus 126 ~~~~l~~~~~~~~~~---~g~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----- 196 (369)
T 3zwl_B 126 CGNYFLAILDNVMKN---PGSINIYEIERDSATHELTKV-SEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD----- 196 (369)
T ss_dssp TSSEEEEEECCBTTB---CCEEEEEEEEECTTTCCEEEE-CSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----
T ss_pred CCCEEEEecCCccCC---CCEEEEEEecCCccceeeccc-ccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----
Confidence 444444444331111 2567777765442 2211 10000 0 011223333346666666543
Q ss_pred CcccccccceeeEEECCCCceEecccCCcccc-cceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTELVVPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.. +.+..+..... -.+++.. ++..++.++.+ ..+.+||.++.+-
T Consensus 197 --------g~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 197 --------GKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDLTYFITSSRD-------TNSFLVDVSTLQV 252 (369)
T ss_dssp --------SEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCE
T ss_pred --------CEEEEEECCCCc-EeEEEEecCCCceeEEEECCCCCEEEEecCC-------ceEEEEECCCCce
Confidence 568899987631 21221111111 1222222 67777777666 5788999887654
No 95
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.87 E-value=0.12 Score=40.99 Aligned_cols=192 Identities=8% Similarity=-0.133 Sum_probs=96.9
Q ss_pred ceEEEEeCCC-CCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNN-KQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t-~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..++.+|..+ ++...+...........++.. +++.+++++... .....++.++..++..+.+..... .......
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~s 137 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE-FGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWS 137 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT-TSSCEEEEEETTCCCCEECCSSSS---EEEEEEC
T ss_pred CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC-CCcceEEEEECCCCceEEeecCCC---ccceEEC
Confidence 4789999998 777666543322222223333 555555554322 134678889888777555543322 1122222
Q ss_pred -C-CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCcccccccc
Q psy9754 145 -N-DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQKMYSVS 221 (306)
Q Consensus 145 -~-~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~~ 221 (306)
+ ..|++.+.... ...++.+|..+.....+ ...... . ..+....+++ |++.+.... ..
T Consensus 138 pdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~-~~~~~~-~-~~~~~s~dg~~l~~~~~~~~-----------~~ 197 (297)
T 2ojh_A 138 PDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRL-THGEGR-N-DGPDYSPDGRWIYFNSSRTG-----------QM 197 (297)
T ss_dssp TTSSEEEEEEEETT------EEEEEEEETTTCCEEEC-CCSSSC-E-EEEEECTTSSEEEEEECTTS-----------SC
T ss_pred CCCCEEEEEECCCC------ceEEEEEECCCCcceEc-ccCCCc-c-ccceECCCCCEEEEEecCCC-----------Cc
Confidence 3 34554554321 23677777887777666 322211 1 2233333455 444433221 15
Q ss_pred eeeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccc----cccceEEEeeccccceec
Q psy9754 222 DLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYK----RTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 222 ~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~----~~~~~~~~yd~~~~~W~~ 284 (306)
.++.++........+..... ....+.. -+++.+++++...... .....+++||+++++...
T Consensus 198 ~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAY--GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EEEEEETTSSCEEECCCCSE--EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred cEEEECCCCCCcEEEecCCc--ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 67777776666655543221 1112222 2666555554432100 022579999998877644
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.85 E-value=0.17 Score=42.97 Aligned_cols=52 Identities=8% Similarity=0.151 Sum_probs=28.5
Q ss_pred ceeeEEECCCCceEecccCCccccc-ceeee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHA-HSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~-~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+..-. ..+...... .+++. .+++.++.|+.+ ..+.+||..+.+
T Consensus 318 ~~i~iwd~~~~~~~--~~~~~h~~~v~~v~~~~~g~~l~s~s~D-------~~i~vwd~~~~~ 371 (410)
T 1vyh_C 318 KTIKMWDVSTGMCL--MTLVGHDNWVRGVLFHSGGKFILSCADD-------KTLRVWDYKNKR 371 (410)
T ss_dssp SEEEEEETTTTEEE--EEEECCSSCEEEEEECSSSSCEEEEETT-------TEEEEECCTTSC
T ss_pred CeEEEEECCCCceE--EEEECCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 56788988765422 111111111 12222 266777777766 578889887654
No 97
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.85 E-value=0.15 Score=41.89 Aligned_cols=156 Identities=12% Similarity=0.116 Sum_probs=84.4
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC-------ccccc-ceeeEEE-C-CEEEEEcccCCCCCCCCCccEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL-------KIARM-GMAVAEI-N-DKIWIAGGYTGDKMNPVTDKVE 167 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~-------~~~~~-~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~ 167 (306)
++.||+..+..+ ..+.+||+....-..+... +.... -..+++. + +.||+.... .+.+.
T Consensus 154 ~g~lyv~d~~~~----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--------~~~I~ 221 (329)
T 3fvz_A 154 TGAVFVSDGYCN----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--------NGRIQ 221 (329)
T ss_dssp TCCEEEEECSSC----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--------TTEEE
T ss_pred CCeEEEEeCCCC----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--------CCEEE
Confidence 579999975322 6788899655443333211 11111 2233433 3 899998632 36799
Q ss_pred EEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEec-ccCCcccc-c
Q psy9754 168 CYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFV-TELVVPRH-A 245 (306)
Q Consensus 168 ~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~-~~~p~~~~-~ 245 (306)
+||+++.+.............-.+++... +.+|...|....... ....+.++++.+.+.... ...+.... -
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~------~~~~v~~~~~~~g~~~~~~~~~~~~~~~p 294 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQ------EPVQGFVMNFSSGEIIDVFKPVRKHFDMP 294 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCS------CCCCEEEEETTTCCEEEEECCSSSCCSSE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccC------CCcEEEEEEcCCCeEEEEEcCCCCccCCe
Confidence 99998776544312222222222333334 777777664211100 124678899887765533 21111111 1
Q ss_pred ceeeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 246 HSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 246 ~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+++.- ++.||+....+ +++.+|+++.
T Consensus 295 ~~ia~~~dG~lyvad~~~-------~~I~~~~~~~ 322 (329)
T 3fvz_A 295 HDIVASEDGTVYIGDAHT-------NTVWKFTLTE 322 (329)
T ss_dssp EEEEECTTSEEEEEESSS-------CCEEEEEEEE
T ss_pred eEEEECCCCCEEEEECCC-------CEEEEEeCCc
Confidence 233333 77899987655 5788998864
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.84 E-value=0.093 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.489 Sum_probs=22.0
Q ss_pred CCEEEEEeCccCccccccceEEEeecc-ccceeccCCCCcc
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFD-RQAWIKGVSGLPA 291 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~p~ 291 (306)
++++++.|+.+ ..+.+|+.. .++|.. +..+..
T Consensus 273 ~g~~las~~~D-------~~v~lw~~~~~g~~~~-~~~~~~ 305 (316)
T 3bg1_A 273 TANILAVSGGD-------NKVTLWKESVDGQWVC-ISDVNK 305 (316)
T ss_dssp TTCCEEEEESS-------SCEEEEEECTTSCEEE-EEECC-
T ss_pred CCCEEEEEcCC-------CeEEEEEECCCCcEEE-eeeccC
Confidence 67888888777 468888875 567876 444443
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.83 E-value=0.17 Score=42.28 Aligned_cols=177 Identities=6% Similarity=-0.043 Sum_probs=92.1
Q ss_pred ceEEEEeCCCCCeeeCCCC-CCCccceeeEEEC--CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccccc-ceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNM-TYPRKIFSFVSCL--DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARM-GMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~-~~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~-~~~~~ 142 (306)
..+..||..+.+....... .....-.+++... +.+++.|+.+ ..+.++|..++....+........ -..++
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEEECCCCSSCCEEEEE
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEEeccCCCCCCeEEEE
Confidence 4678888887776544332 1222223344443 3666666644 457788988766655543221111 11222
Q ss_pred E-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCccccccc
Q psy9754 143 E-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 143 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~ 220 (306)
. -++.+++.|+.+ ..+..+|+.......+ .... ..-.++....++. +++.|+..
T Consensus 171 ~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~-~~h~--~~v~~~~~~~~~~~~l~s~~~d------------- 226 (383)
T 3ei3_B 171 VSVSRQMLATGDST--------GRLLLLGLDGHEIFKE-KLHK--AKVTHAEFNPRCDWLMATSSVD------------- 226 (383)
T ss_dssp EETTTTEEEEEETT--------SEEEEEETTSCEEEEE-ECSS--SCEEEEEECSSCTTEEEEEETT-------------
T ss_pred ECCCCCEEEEECCC--------CCEEEEECCCCEEEEe-ccCC--CcEEEEEECCCCCCEEEEEeCC-------------
Confidence 2 245556666533 5788899865544444 2111 1112333333455 67776653
Q ss_pred ceeeEEECCC----CceEecccCCcccccceeee-e-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 221 SDLDVFVSNE----KEWKFVTELVVPRHAHSASV-L-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 221 ~~~~~y~~~~----~~W~~~~~~p~~~~~~~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+ ...... +.....-.+++. - ++..++.++.+ ..+.+||+.+.+
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~~~~~d-------~~i~iwd~~~~~ 284 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAE--MPHEKPVNAAYFNPTDSTKLLTTDQR-------NEIRVYSSYDWS 284 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEE--EECSSCEEEEEECTTTSCEEEEEESS-------SEEEEEETTBTT
T ss_pred CEEEEEeCCCCCcccceEEE--ecCCCceEEEEEcCCCCCEEEEEcCC-------CcEEEEECCCCc
Confidence 5678888876 222211 111111122222 2 56777777766 578889887654
No 100
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.82 E-value=0.32 Score=45.33 Aligned_cols=178 Identities=8% Similarity=0.066 Sum_probs=98.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCC---ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC-CcccccceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYP---RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP-LKIARMGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~-~~~~~~~~~~~ 142 (306)
+.+.+||+.+++.......... .....+...++.||+... ..+++||+.+++++.+.. .+....-..+.
T Consensus 107 ~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-------~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~ 179 (795)
T 4a2l_A 107 DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-------EGLIMFDIKESKFIDDSFSTAMHKTIASTL 179 (795)
T ss_dssp SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET-------TEEEEEETTTTEEECSSSCHHHHTCCEEEE
T ss_pred CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC-------CceEEEECCCCEEEeccCCCCCCcceEEEE
Confidence 4578999998888765432111 111222234788998643 458899999988876543 11111011222
Q ss_pred -EECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccc
Q psy9754 143 -EINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVS 221 (306)
Q Consensus 143 -~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~ 221 (306)
..++.||+.. . ...+++||+++.+++.. ...+....-.+++...++.|++.... .
T Consensus 180 ~d~~g~lwigt--~-------~~Gl~~~~~~~~~~~~~-~~~~~~~~i~~i~~d~~g~lwigt~~--------------~ 235 (795)
T 4a2l_A 180 YRQGDQIYIGT--S-------TDGLYTYSITQKTFEKV-IPILGTKQIQAILQQSPTRIWVATEG--------------A 235 (795)
T ss_dssp EEETTEEEEEE--S-------SSCEEEEETTTCCEEEC-C----CCCEEEEEEEETTEEEEEEBS--------------S
T ss_pred ECCCCCEEEEE--C-------CCCEEEEeCCCCeEEEe-cCCCCCCeeEEEEEcCCCCEEEEECC--------------C
Confidence 2478898842 1 13689999999998876 22221222223444456888874311 3
Q ss_pred eeeEEECCCCceEecccCC---cc---cccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 222 DLDVFVSNEKEWKFVTELV---VP---RHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 222 ~~~~y~~~~~~W~~~~~~p---~~---~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
.+++||+.+++++.....+ .. ..-.++..- ++.|++.-. ..+.+||+++++++.
T Consensus 236 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~---------~Gl~~~~~~~~~~~~ 296 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF---------NDLNIYHEGTDSFAS 296 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES---------SCEEEEETTTTEEEE
T ss_pred CeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC---------ChhheEcCCCCeEEE
Confidence 4789999888887654321 11 111122222 566666421 135667776666654
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.82 E-value=0.2 Score=43.01 Aligned_cols=190 Identities=8% Similarity=0.030 Sum_probs=91.7
Q ss_pred ceEEEEeCCCCCeee--CCCCCCC-ccceeeEE-EC---CEEEEEccCCCCCCCceeEEEeCCCCcEEe--ccCCccccc
Q psy9754 67 NSVWSFNPNNKQWTQ--EPNMTYP-RKIFSFVS-CL---DKIYAIGGQDCKTLLSSVECYDPVAHTWED--VAPLKIARM 137 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~--~~~~~~~-~~~~~~~~-~~---~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~--~~~~~~~~~ 137 (306)
..++.++..+.+... ...+... ....+++. -+ +++++.|+.+ ..+.+||..+.+... +........
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceE
Confidence 457888877655332 1111111 11122222 36 7777777754 457778887665322 111111111
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc-----------------------CCcceeEEEEE
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL-----------------------RYPRYLATLVS 194 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-----------------------~~~~~~~~~~~ 194 (306)
. .+.. ++.+++.|+.+ ..+..||..+.+........ .....-..+..
T Consensus 246 ~-~~~s-d~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 246 S-ICCG-KDYLLLSAGGD--------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp E-EEEC-STTEEEEEESS--------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred E-EEEC-CCCEEEEEeCC--------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 1 1222 66666666532 57889998887643220100 01111223333
Q ss_pred EeCCEEEEEcCCCCCCCCCcccccccceeeEEEC--C-CCceEecccCCcccccceeeeeCCEEEEEeCccCccc--ccc
Q psy9754 195 VNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVS--N-EKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYK--RTL 269 (306)
Q Consensus 195 ~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~--~-~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~--~~~ 269 (306)
..+++.+++++... ..+.+|++ . ...++.+..++....-.+++...+.+++..+...... ...
T Consensus 316 ~~~~~~l~~~~~~d------------~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~ 383 (450)
T 2vdu_B 316 SKNLPFVAFFVEAT------------KCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNF 383 (450)
T ss_dssp CSSSSEEEEEETTC------------SEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCS
T ss_pred eCCCCEEEEEECCC------------CeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcc
Confidence 33455555544211 56788887 3 3455555544433223344444667777665543211 222
Q ss_pred ceEEEeecccccee
Q psy9754 270 KSVECWCFDRQAWI 283 (306)
Q Consensus 270 ~~~~~yd~~~~~W~ 283 (306)
-.++.++.++++|+
T Consensus 384 i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 384 AKFIEYNLNENSFV 397 (450)
T ss_dssp EEEEEEETTTTEEE
T ss_pred eEEEEEEcCCCeEE
Confidence 36666677777774
No 102
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.82 E-value=0.058 Score=44.20 Aligned_cols=155 Identities=5% Similarity=0.019 Sum_probs=81.8
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+++||+.+... ..+++||+.+++.+.+...... .-..++. -++++|+........ ...+.++|+++...
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~-~~~~i~~~~dg~l~v~~~~~~~~----~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSHKA-NPAAIKIHKDGRLFVCYLGDFKS----TGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECSSS-SEEEEEECTTSCEEEEECTTSSS----CCEEEEECTTSCSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCCCC-CcceEEECCCCcEEEEeCCCCCC----CceEEEEeCCCCEE
Confidence 67888876532 5688999999887765321111 1122222 367888875322111 25789999988876
Q ss_pred EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CC-E
Q psy9754 177 TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-Q 254 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~ 254 (306)
+.+.........-..++...++++|+........ .....++++|+++.+...+..- .....+++.- ++ .
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST-------NPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKV 195 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT-------BCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSE
T ss_pred EEEEccCccCCcccceEECCCCCEEEEecccccc-------CCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCE
Confidence 5331211112222334444468888865421110 0125688888877666544211 0111222222 44 4
Q ss_pred EEEEeCccCccccccceEEEeecc
Q psy9754 255 ILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 255 i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
||+..... ..+++||++
T Consensus 196 l~v~~~~~-------~~i~~~d~~ 212 (333)
T 2dg1_A 196 LWVTETTA-------NRLHRIALE 212 (333)
T ss_dssp EEEEEGGG-------TEEEEEEEC
T ss_pred EEEEeCCC-------CeEEEEEec
Confidence 77664332 467777774
No 103
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.74 E-value=0.16 Score=42.22 Aligned_cols=179 Identities=12% Similarity=0.055 Sum_probs=83.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-----ee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-----AV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-----~~ 141 (306)
..+..+|..+.+-...-..+..........-++..++.||.+. .+.+|+.....-............| .+
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~-----~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 160 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN-----KCSVYPLTFDKNENMAAKKKSVAMHTNYLSAC 160 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS-----EEEEEECCCCTTCCSGGGCEEEEECSSCEEEE
T ss_pred CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC-----CEEEEEEeccccccccccceeeeccCCcEEEE
Confidence 4567778776654332222222221122222667777777653 4556665433211111100000111 11
Q ss_pred EEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE--eCCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV--NNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
... ++..++.|+.+ ..+..+|+++.+-........ .... +.... .++.+++.|+..
T Consensus 161 ~~~~~~~~l~t~s~D--------~~v~lwd~~~~~~~~~~~~h~-~~v~-~~~~~~~~~g~~l~sgs~D----------- 219 (354)
T 2pbi_B 161 SFTNSDMQILTASGD--------GTCALWDVESGQLLQSFHGHG-ADVL-CLDLAPSETGNTFVSGGCD----------- 219 (354)
T ss_dssp EECSSSSEEEEEETT--------SEEEEEETTTCCEEEEEECCS-SCEE-EEEECCCSSCCEEEEEETT-----------
T ss_pred EEeCCCCEEEEEeCC--------CcEEEEeCCCCeEEEEEcCCC-CCeE-EEEEEeCCCCCEEEEEeCC-----------
Confidence 111 33334444322 568889988876433211111 1111 11111 135677777654
Q ss_pred ccceeeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+.+....-...... -.+++. .++..++.|+.+ ..+.+||+.+.+
T Consensus 220 --g~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s~D-------~~v~lwd~~~~~ 273 (354)
T 2pbi_B 220 --KKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSGDAFASGSDD-------ATCRLYDLRADR 273 (354)
T ss_dssp --SCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETT-------SCEEEEETTTTE
T ss_pred --CeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 56789998877643221111111 112222 267788888776 468888887654
No 104
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.74 E-value=0.17 Score=41.27 Aligned_cols=187 Identities=9% Similarity=0.011 Sum_probs=94.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~- 143 (306)
..+++||+.+++...+...+ ...-.+++.. ++++|+...... .....++++|+.++..+.+ ........-..++.
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD 143 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEEEccCccCCcccceEEC
Confidence 57899999988876543211 1122233333 678888754321 1125688999988876532 22211111112222
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcccccccce
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
-++++|+......... ....++++|+++.+...+...... ..+.+...++ .||+..... ..
T Consensus 144 ~~g~l~v~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~---~~~i~~~~dg~~l~v~~~~~-------------~~ 205 (333)
T 2dg1_A 144 SKGGFYFTDFRGYSTN--PLGGVYYVSPDFRTVTPIIQNISV---ANGIALSTDEKVLWVTETTA-------------NR 205 (333)
T ss_dssp TTSCEEEEECCCBTTB--CCEEEEEECTTSCCEEEEEEEESS---EEEEEECTTSSEEEEEEGGG-------------TE
T ss_pred CCCCEEEEeccccccC--CCceEEEEeCCCCEEEEeecCCCc---ccceEECCCCCEEEEEeCCC-------------Ce
Confidence 2578888653211110 135789999887776655221111 1233333344 477764321 46
Q ss_pred eeEEECCCC--ceEecc-----cCCcccccceeeee-CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 223 LDVFVSNEK--EWKFVT-----ELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 223 ~~~y~~~~~--~W~~~~-----~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
+++||++++ ....+. .++....-.+++.- ++++|+..... ..+.+||++..
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-------~~v~~~d~~g~ 264 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ-------GRVLVFNKRGY 264 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT-------TEEEEECTTSC
T ss_pred EEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC-------CEEEEECCCCC
Confidence 788888542 232211 11110111122222 67788765332 46778887543
No 105
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.74 E-value=0.17 Score=40.83 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=19.5
Q ss_pred CCEEEEEeCccCccccccceEEEeecc-ccceec
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFD-RQAWIK 284 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~-~~~W~~ 284 (306)
++++++.|+.+ ..+.+|+.. .+.|+.
T Consensus 265 ~g~~las~~~D-------~~v~lw~~~~~g~w~~ 291 (297)
T 2pm7_B 265 SGNVLALSGGD-------NKVTLWKENLEGKWEP 291 (297)
T ss_dssp SSCCEEEEETT-------SCEEEEEECTTSCEEE
T ss_pred CCCEEEEEcCC-------CcEEEEEECCCCcEEe
Confidence 77888888776 467788875 567877
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.73 E-value=0.11 Score=46.24 Aligned_cols=180 Identities=12% Similarity=0.096 Sum_probs=89.5
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeC--CCCcEEeccCCcccccceee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDP--VAHTWEDVAPLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~--~~~~w~~~~~~~~~~~~~~~ 141 (306)
...+..+|..+++-... ++....-|.++.. ++ .+|+.+. + ..+.+||. .+.+- +..++....-..+
T Consensus 158 d~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~--~~~i~~g~~p~~v 227 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTK--VAEIKIGIEARSV 227 (543)
T ss_dssp GTEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEE--EEEEECCSEEEEE
T ss_pred CCeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcE--EEEEecCCCcceE
Confidence 35788889988764322 2212223444343 44 6666653 2 66889999 55542 2233322222233
Q ss_pred EEE-----CC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccc--c--------CCcceeEEEEEEe-CCEEEEEc
Q psy9754 142 AEI-----ND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATK--L--------RYPRYLATLVSVN-NEKLYIIG 204 (306)
Q Consensus 142 ~~~-----~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--~--------~~~~~~~~~~~~~-~~~iyi~G 204 (306)
+.. ++ .+|+.. .. .+.+.++|..+.+-...-.. . +.++.. +++... +..+|+..
T Consensus 228 a~sp~~~~dg~~l~v~~-~~-------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~-~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGA-YW-------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA-AIIASHEHPEFIVNV 298 (543)
T ss_dssp EECCSTTCTTTEEEEEE-EE-------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE-EEEECSSSSEEEEEE
T ss_pred EeCCCcCCCCCEEEEEE-cc-------CCeEEEEeccccccceeecccCcccCccccccCCceE-EEEECCCCCEEEEEE
Confidence 333 44 455543 21 25678889887764322111 0 122322 222332 24555443
Q ss_pred CCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeeccccce
Q psy9754 205 GASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
... ..+.++|..+.+-..+..++..+.-+..+.- +++ +|+.+..+ +.+.++|.++++-
T Consensus 299 ~~~-------------g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~-------~~v~v~D~~tg~l 358 (543)
T 1nir_A 299 KET-------------GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS-------NKVAVIDSKDRRL 358 (543)
T ss_dssp TTT-------------TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG-------TEEEEEETTTTEE
T ss_pred CCC-------------CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC-------CeEEEEECCCCeE
Confidence 221 5678888876542222223333333444443 565 44443333 5788899988765
Q ss_pred ec
Q psy9754 283 IK 284 (306)
Q Consensus 283 ~~ 284 (306)
..
T Consensus 359 ~~ 360 (543)
T 1nir_A 359 SA 360 (543)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 107
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.72 E-value=0.046 Score=45.29 Aligned_cols=153 Identities=12% Similarity=0.182 Sum_probs=79.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccc--eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMG--MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++++++.||.+ ..+.++|..+++|.....+...+.. ..++.. ++.+++.|+.+ ..+..+|..+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D--------~~v~iw~~~~~ 93 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD--------ATTCIWKKNQD 93 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECCC
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--------CcEEEEEccCC
Confidence 56777777755 3466778877776533222221111 122222 45666666543 45677777776
Q ss_pred eeEEcccccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc-eEecccCCcccccceeeee-
Q psy9754 175 TWTTLATKLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE-WKFVTELVVPRHAHSASVL- 251 (306)
Q Consensus 175 ~W~~~~~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~-W~~~~~~p~~~~~~~~~~~- 251 (306)
.++.+ ..+.. ...-.++....++++++.|+.. ..+.+||+.+.. ++.+..+.........+..
T Consensus 94 ~~~~~-~~~~~h~~~v~~v~~sp~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 94 DFECV-TTLEGHENEVKSVAWAPSGNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp -EEEE-EEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred CeEEE-EEccCCCCCceEEEEeCCCCEEEEEECC-------------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 65443 22111 1111233333457777777654 457888876542 3333222211111122222
Q ss_pred -CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 252 -SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 252 -~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++.+++.|+.+ ..+.+||.++.+|..
T Consensus 160 p~~~~l~s~s~d-------~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 160 PSQELLASASYD-------DTVKLYREEEDDWVC 186 (345)
T ss_dssp SSSSCEEEEETT-------SCEEEEEEETTEEEE
T ss_pred CCCCEEEEEeCC-------CcEEEEEecCCCEEE
Confidence 67777777766 468888888877753
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.69 E-value=0.1 Score=44.41 Aligned_cols=136 Identities=10% Similarity=0.081 Sum_probs=66.3
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc-cccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI-ARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~-~~~~~~~~~~ 144 (306)
..+..+|..+++....-...... -.+++.. ++++++.|+.+. .+.+||..+.+-. ..+.. ...-..++..
T Consensus 130 g~i~vwd~~~~~~~~~l~~h~~~-V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~--~~~~~h~~~V~~v~~~ 201 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCSADM-----TIKLWDFQGFECI--RTMHGHDHNVSSVSIM 201 (410)
T ss_dssp SCEEEEETTTCCCCEEECCCSSC-EEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEE--ECCCCCSSCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEeccCCc-EEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcee--EEEcCCCCCEEEEEEe
Confidence 46778888876543221111111 1222222 567777777653 3556787665422 22211 1111122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++..++.|+.+ ..+..+|..+.......... .. .-..+....++.+++.|+.. ..+
T Consensus 202 p~~~~l~s~s~D--------~~i~~wd~~~~~~~~~~~~h-~~-~v~~~~~~~~g~~l~s~s~D-------------~~v 258 (410)
T 1vyh_C 202 PNGDHIVSASRD--------KTIKMWEVQTGYCVKTFTGH-RE-WVRMVRPNQDGTLIASCSND-------------QTV 258 (410)
T ss_dssp SSSSEEEEEETT--------SEEEEEETTTCCEEEEEECC-SS-CEEEEEECTTSSEEEEEETT-------------SCE
T ss_pred CCCCEEEEEeCC--------CeEEEEECCCCcEEEEEeCC-Cc-cEEEEEECCCCCEEEEEcCC-------------CeE
Confidence 45555666533 56888998877643320111 11 11122233356777776654 456
Q ss_pred eEEECCCCce
Q psy9754 224 DVFVSNEKEW 233 (306)
Q Consensus 224 ~~y~~~~~~W 233 (306)
.+||+.+...
T Consensus 259 ~vwd~~~~~~ 268 (410)
T 1vyh_C 259 RVWVVATKEC 268 (410)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 7788776553
No 109
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.68 E-value=0.042 Score=45.57 Aligned_cols=177 Identities=12% Similarity=0.157 Sum_probs=86.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCC--CccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccc-eeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTY--PRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMG-MAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~--~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~-~~~~ 142 (306)
..+..+|..+++|.....+.. ...-.+++.. +++.++.|+.+. .+.++|..+..++.+..+...... ..++
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 346666776776643221111 1111222222 566777777553 456677777665544333221111 1222
Q ss_pred EE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe-eEEcccccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccc
Q psy9754 143 EI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-WTTLATKLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 143 ~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
.. ++.+++.|+.+ ..+..+|+.+.. +..+ ..+.. ...-.+++...++.+++.|+..
T Consensus 113 ~sp~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~s~s~d------------ 171 (345)
T 3fm0_A 113 WAPSGNLLATCSRD--------KSVWVWEVDEEDEYECV-SVLNSHTQDVKHVVWHPSQELLASASYD------------ 171 (345)
T ss_dssp ECTTSSEEEEEETT--------SCEEEEEECTTSCEEEE-EEECCCCSCEEEEEECSSSSCEEEEETT------------
T ss_pred EeCCCCEEEEEECC--------CeEEEEECCCCCCeEEE-EEecCcCCCeEEEEECCCCCEEEEEeCC------------
Confidence 22 45666666543 457778776543 3222 11111 1111223333356777776654
Q ss_pred cceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeec
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
..+.+||..+..|.....+.........+.+ +++.++.|+.+ ..+.+||.
T Consensus 172 -~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D-------~~v~iW~~ 223 (345)
T 3fm0_A 172 -DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD-------RTVRIWRQ 223 (345)
T ss_dssp -SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEEE
T ss_pred -CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC-------CeEEEecc
Confidence 4578888888877655443322221222222 67777777766 34556654
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.68 E-value=0.32 Score=43.30 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=75.1
Q ss_pred EEEEccCCCCCCCceeEEEeCCCCcEEec-cCCcccc-cceeeEEE-C-CEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 101 IYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIAR-MGMAVAEI-N-DKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 101 iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~~-~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+++.|+.+ ..+.+||..+.+-... ....... .-..++.. + +.+++.|+.+ ..+..||..+.+.
T Consensus 175 ~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~ 241 (615)
T 1pgu_A 175 RSMTVGDD-----GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD--------RKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEETT-----TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT--------CCEEEEETTTCCE
T ss_pred EEEEEeCC-----CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC--------CeEEEEECCCCCE
Confidence 56666643 5677788776653321 2111100 11122222 4 5666666543 5688999887765
Q ss_pred EEccccc--CCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCC---cccccceeeee
Q psy9754 177 TTLATKL--RYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELV---VPRHAHSASVL 251 (306)
Q Consensus 177 ~~~~~~~--~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p---~~~~~~~~~~~ 251 (306)
....... .....-.++... ++..++.++.. ..+.+||+.+.+....-..+ ......++...
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD-------------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEETT-------------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEcCC-------------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 4431110 111111222232 47777776653 56788998876544322222 11112222233
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
++..++.|+.+ ..+.+||+.+.+
T Consensus 308 ~~~~l~~~~~~-------g~i~~~d~~~~~ 330 (615)
T 1pgu_A 308 GNGRIISLSLD-------GTLNFYELGHDE 330 (615)
T ss_dssp ETTEEEEEETT-------SCEEEEETTEEE
T ss_pred CCCeEEEEECC-------CCEEEEECCCCc
Confidence 67777777766 468888887644
No 111
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.57 E-value=0.047 Score=45.36 Aligned_cols=179 Identities=9% Similarity=0.053 Sum_probs=84.3
Q ss_pred ceEEEEeCCCCCeeeCCCCC---CCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc-cccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT---YPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI-ARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~---~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~-~~~~~~~ 141 (306)
..+..+|..+++-....... ....-.+++.. +++.++.|+.+ ..+.++|..+++-.. .+.. ...-..+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~~~~~~~--~~~~h~~~V~~~ 175 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLAQQVVLS--SYRAHAAQVTCV 175 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE--EECCCSSCEEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEE--EEcCcCCceEEE
Confidence 35677777776532211110 01111222222 66777777755 357788988876322 1111 1111112
Q ss_pred EE-E-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AE-I-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
+. . +..+++.|+.+ +.+..+|+.+.+-..............+++... ++++++.|+.+
T Consensus 176 ~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d----------- 236 (344)
T 4gqb_B 176 AASPHKDSVFLSCSED--------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN----------- 236 (344)
T ss_dssp EECSSCTTEEEEEETT--------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----------
T ss_pred EecCCCCCceeeeccc--------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-----------
Confidence 22 1 33566666543 467889988776433201111111111222222 35677777654
Q ss_pred ccceeeEEECCCCceEecccCCcccccc-eeeee-CC-EEEEEeCccCccccccceEEEeeccccce
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELVVPRHAH-SASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+- +..+....... +++.- ++ ++++.|+.+ ..+.+||.++++-
T Consensus 237 --g~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-------~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 237 --GTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSED-------CSLAVLDSSLSEL 292 (344)
T ss_dssp --SEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETT-------SCEEEECTTCCEE
T ss_pred --CcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCC-------CeEEEEECCCCcE
Confidence 5678888876542 22222111111 22222 44 566666666 4678888877654
No 112
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.15 Score=42.97 Aligned_cols=149 Identities=10% Similarity=0.105 Sum_probs=75.7
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc-----cccceeeEEE-C-CEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI-----ARMGMAVAEI-N-DKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~-----~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
+.+++.|+.+ ..+.+||..+.+....-.... ...-..++.. + ..+++.++.+.. ...+..||.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWDL 247 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEET
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEeC
Confidence 5677777654 457889998876443322221 1111222222 2 346666654321 126788888
Q ss_pred CCCe--eEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccc-cce
Q psy9754 172 RTNT--WTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRH-AHS 247 (306)
Q Consensus 172 ~~~~--W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~-~~~ 247 (306)
.+.. ...+ .. .....-.++.... ++.+++.++.. ..+.+||+.+.+-. ..++.... -.+
T Consensus 248 ~~~~~~~~~~-~~-~~~~~v~~~~~s~~~~~~l~s~~~d-------------g~v~~wd~~~~~~~--~~~~~~~~~v~~ 310 (416)
T 2pm9_A 248 RNANTPLQTL-NQ-GHQKGILSLDWCHQDEHLLLSSGRD-------------NTVLLWNPESAEQL--SQFPARGNWCFK 310 (416)
T ss_dssp TSTTSCSBCC-CS-CCSSCEEEEEECSSCSSCEEEEESS-------------SEEEEECSSSCCEE--EEEECSSSCCCC
T ss_pred CCCCCCcEEe-ec-CccCceeEEEeCCCCCCeEEEEeCC-------------CCEEEeeCCCCccc--eeecCCCCceEE
Confidence 7643 1222 10 1111112233332 46777777654 56788988765432 22221111 112
Q ss_pred eeee-CC-EEEEEeCccCccccccceEEEeeccccc
Q psy9754 248 ASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 248 ~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
++.. ++ .+++.++.+ ..+.+||+.+..
T Consensus 311 ~~~s~~~~~~l~s~~~d-------~~i~iw~~~~~~ 339 (416)
T 2pm9_A 311 TKFAPEAPDLFACASFD-------NKIEVQTLQNLT 339 (416)
T ss_dssp EEECTTCTTEEEECCSS-------SEEEEEESCCCC
T ss_pred EEECCCCCCEEEEEecC-------CcEEEEEccCCC
Confidence 2222 55 788888877 568888887654
No 113
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.51 E-value=0.2 Score=40.71 Aligned_cols=93 Identities=10% Similarity=0.003 Sum_probs=48.1
Q ss_pred cEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccc
Q psy9754 165 KVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRH 244 (306)
Q Consensus 165 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~ 244 (306)
.+..+|+.+.+-..+ ...+......++....+++.++++ . ..+.+||+.+.+-...- +....
T Consensus 220 ~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~--~-------------~~v~~~d~~~~~~~~~~--~~~~~ 281 (337)
T 1pby_B 220 GLLTMDLETGEMAMR-EVRIMDVFYFSTAVNPAKTRAFGA--Y-------------NVLESFDLEKNASIKRV--PLPHS 281 (337)
T ss_dssp EEEEEETTTCCEEEE-EEEECSSCEEEEEECTTSSEEEEE--E-------------SEEEEEETTTTEEEEEE--ECSSC
T ss_pred ceEEEeCCCCCceEe-ecCCCCCceeeEEECCCCCEEEEe--C-------------CeEEEEECCCCcCccee--cCCCc
Confidence 678999988875533 211112122233333344433333 1 46789998776543222 22222
Q ss_pred cceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 245 AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 245 ~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+++.. +++.+++++.+ ..+.+||+++++-
T Consensus 282 ~~~~~~s~dg~~l~~~~~~-------~~i~v~d~~~~~~ 313 (337)
T 1pby_B 282 YYSVNVSTDGSTVWLGGAL-------GDLAAYDAETLEK 313 (337)
T ss_dssp CCEEEECTTSCEEEEESBS-------SEEEEEETTTCCE
T ss_pred eeeEEECCCCCEEEEEcCC-------CcEEEEECcCCcE
Confidence 2333333 55544444443 5789999987654
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.45 E-value=0.23 Score=40.55 Aligned_cols=52 Identities=10% Similarity=0.132 Sum_probs=29.8
Q ss_pred ceeeEEECCCCceEecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccce
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+-...-.. ......++.. ++ .||+ ++.. ..+.+||.++.+-
T Consensus 275 ~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~-~~~~-------~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 275 NRLAKYDLKQRKLIKAANL--DHTYYCVAFDKKGDKLYL-GGTF-------NDLAVFNPDTLEK 328 (349)
T ss_dssp SEEEEEETTTTEEEEEEEC--SSCCCEEEECSSSSCEEE-ESBS-------SEEEEEETTTTEE
T ss_pred CeEEEEECccCeEEEEEcC--CCCccceEECCCCCEEEE-ecCC-------CeEEEEeccccce
Confidence 5688999887654322222 2122233333 44 5665 5433 5799999987664
No 115
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.44 E-value=0.26 Score=39.52 Aligned_cols=183 Identities=13% Similarity=0.094 Sum_probs=94.8
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEE-ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc----cccee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVS-CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA----RMGMA 140 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~----~~~~~ 140 (306)
...+++||+.++ .+.+.. +... -.+++. -++++|+.... ...+.+||+.+++.+.+...... +....
T Consensus 49 ~~~i~~~~~~~~-~~~~~~-~~~~-~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i 120 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMH-PSHH-QNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFEGKKLNSPNDV 120 (296)
T ss_dssp GTEEEEEETTSC-EEEEES-SCSS-EEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEETTEECCCCCCE
T ss_pred CCEEEEEECCCC-eEEEEC-CCCC-cceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCE
Confidence 357899999887 544432 2111 223333 26788877432 15688999988887765432111 11112
Q ss_pred eEEECCEEEEE----cccCC-----CCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCC
Q psy9754 141 VAEINDKIWIA----GGYTG-----DKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDA 211 (306)
Q Consensus 141 ~~~~~~~iyv~----GG~~~-----~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~ 211 (306)
+..-+++||+. |.... .........++++|+. .+.+.+......+ .+++...++++++.+...
T Consensus 121 ~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~~---- 192 (296)
T 3e5z_A 121 CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTGD---- 192 (296)
T ss_dssp EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEEEEETTT----
T ss_pred EECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeCCC----
Confidence 22236789887 32110 0000013579999987 5555542222222 234444456666444322
Q ss_pred CCcccccccceeeEEECC-CCce-E--ecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 212 TNTQKMYSVSDLDVFVSN-EKEW-K--FVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 212 ~~~~~~~~~~~~~~y~~~-~~~W-~--~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
..+++|++. +.+. . .+-..... .-.+++.- +++||+.. . ..+.+||++...-.
T Consensus 193 ---------~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~--~-------~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 193 ---------NATHRYCLNARGETEYQGVHFTVEPG-KTDGLRVDAGGLIWASA--G-------DGVHVLTPDGDELG 250 (296)
T ss_dssp ---------TEEEEEEECSSSCEEEEEEEECCSSS-CCCSEEEBTTSCEEEEE--T-------TEEEEECTTSCEEE
T ss_pred ---------CeEEEEEECCCCcCcCCCeEeeCCCC-CCCeEEECCCCCEEEEc--C-------CeEEEECCCCCEEE
Confidence 567888886 4454 2 11111111 11123332 78888876 2 46889998754433
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.42 E-value=0.29 Score=39.83 Aligned_cols=181 Identities=12% Similarity=0.128 Sum_probs=85.1
Q ss_pred ceEEEEeC-CCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc-------EEeccCCcccccc
Q psy9754 67 NSVWSFNP-NNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT-------WEDVAPLKIARMG 138 (306)
Q Consensus 67 ~~~~~~d~-~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-------w~~~~~~~~~~~~ 138 (306)
..+..||. .+++-..+...+....-.+++...+.+++.|+.+ ..+.+||..+.. .+.+..+.....-
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v 153 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCce
Confidence 46888998 8777655543111222223333335555555543 456677765400 1222223222222
Q ss_pred eeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCC-Ce--eEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCc
Q psy9754 139 MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRT-NT--WTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNT 214 (306)
Q Consensus 139 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~-~~--W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~ 214 (306)
..+....+. +++|+. ...+..||..+ .. ........ ...-.++.... ++.+++.|+..
T Consensus 154 ~~~~~~~~~-l~~~~~--------d~~i~i~d~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~~l~~~~~d------- 215 (342)
T 1yfq_A 154 FTMDTNSSR-LIVGMN--------NSQVQWFRLPLCEDDNGTIEESGL--KYQIRDVALLPKEQEGYACSSID------- 215 (342)
T ss_dssp EEEEECSSE-EEEEES--------TTEEEEEESSCCTTCCCEEEECSC--SSCEEEEEECSGGGCEEEEEETT-------
T ss_pred EEEEecCCc-EEEEeC--------CCeEEEEECCccccccceeeecCC--CCceeEEEECCCCCCEEEEEecC-------
Confidence 233444555 444432 25788899887 33 22221111 11112333333 46777777653
Q ss_pred ccccccceeeEEECCCC--c--eEecccCCccc----------ccceeeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 215 QKMYSVSDLDVFVSNEK--E--WKFVTELVVPR----------HAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~--~--W~~~~~~p~~~----------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
..+.+|+.+.. . .+....+.... .-.+++.. ++++++.|+.+ ..+.+||.++
T Consensus 216 ------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-------g~i~vwd~~~ 282 (342)
T 1yfq_A 216 ------GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD-------GIISCWNLQT 282 (342)
T ss_dssp ------SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-------SCEEEEETTT
T ss_pred ------CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-------ceEEEEcCcc
Confidence 34566555443 0 11111111110 11122222 67777777766 4788999987
Q ss_pred ccee
Q psy9754 280 QAWI 283 (306)
Q Consensus 280 ~~W~ 283 (306)
++-.
T Consensus 283 ~~~~ 286 (342)
T 1yfq_A 283 RKKI 286 (342)
T ss_dssp TEEE
T ss_pred HhHh
Confidence 6643
No 117
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.41 E-value=0.29 Score=39.75 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=49.1
Q ss_pred ccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccc
Q psy9754 164 DKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPR 243 (306)
Q Consensus 164 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~ 243 (306)
..+..+|..+.+........ .. .-.+++...++++++.|+.. ..+.+||+.+..- +..+....
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h-~~-~v~~~~~s~~~~~l~s~s~D-------------g~i~iwd~~~~~~--~~~~~~~~ 257 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGH-TG-YLNTVTVSPDGSLCASGGKD-------------GQAMLWDLNEGKH--LYTLDGGD 257 (340)
T ss_dssp SCEEEEETTTTEEEEEECCC-SS-CEEEEEECTTSSEEEEEETT-------------CEEEEEETTTTEE--EEEEECSS
T ss_pred CEEEEEECCCCceeeEecCC-CC-cEEEEEECCCCCEEEEEeCC-------------CeEEEEEeccCce--eeeecCCc
Confidence 45788898887654331111 11 11233333457777777654 5678888875542 22222222
Q ss_pred ccceeeeeCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 244 HAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 244 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
....++...+..++.++.+ ..+.+||.++..
T Consensus 258 ~v~~~~~~~~~~~~~~~~d-------~~i~iwd~~~~~ 288 (340)
T 4aow_A 258 IINALCFSPNRYWLCAATG-------PSIKIWDLEGKI 288 (340)
T ss_dssp CEEEEEECSSSSEEEEEET-------TEEEEEETTTTE
T ss_pred eEEeeecCCCCceeeccCC-------CEEEEEECCCCe
Confidence 2222333344445555554 467888887654
No 118
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.40 E-value=0.38 Score=40.86 Aligned_cols=92 Identities=9% Similarity=0.083 Sum_probs=49.0
Q ss_pred ccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcc
Q psy9754 164 DKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVP 242 (306)
Q Consensus 164 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~ 242 (306)
..+..+|+.+.+-... ...... ..+.+... .+.+++..|... ..+.+||..+.+ .+..+...
T Consensus 301 ~~I~iwd~~t~~~~~~-~~~~~~--v~~~~~~~~~~~lv~~sg~~d------------~~I~iwd~~~~~--~v~~l~gH 363 (420)
T 4gga_A 301 RHIRIWNVCSGACLSA-VDAHSQ--VCSILWSPHYKELISGHGFAQ------------NQLVIWKYPTMA--KVAELKGH 363 (420)
T ss_dssp CEEEEEETTTTEEEEE-EECSSC--EEEEEEETTTTEEEEEECTTT------------CCEEEEETTTCC--EEEEECCC
T ss_pred CEEEEEeCCcccccee-eccccc--eeeeeecCCCCeEEEEEecCC------------CEEEEEECCCCc--EEEEEcCC
Confidence 4688899988875443 221111 12223333 355555555432 457889886544 33333221
Q ss_pred cccce-eee-eCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 243 RHAHS-ASV-LSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 243 ~~~~~-~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
..... ++. -++..++.||.+ ..+.+||+.+
T Consensus 364 ~~~V~~l~~spdg~~l~S~s~D-------~tvriWdv~~ 395 (420)
T 4gga_A 364 TSRVLSLTMSPDGATVASAAAD-------ETLRLWRCFE 395 (420)
T ss_dssp SSCEEEEEECTTSSCEEEEETT-------TEEEEECCSC
T ss_pred CCCEEEEEEcCCCCEEEEEecC-------CeEEEEECCC
Confidence 11111 222 277888888877 4677887643
No 119
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.38 E-value=0.29 Score=39.41 Aligned_cols=171 Identities=9% Similarity=-0.004 Sum_probs=86.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCC--C--ccceeeEEECCEEEEEccCCC------CCCCceeEEEeCCCCcEEeccCCcccc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTY--P--RKIFSFVSCLDKIYAIGGQDC------KTLLSSVECYDPVAHTWEDVAPLKIAR 136 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~--~--~~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~~d~~~~~w~~~~~~~~~~ 136 (306)
..+++||+.+++++.+..... + +....++.-++.+|+..-... ......++++++.. +...+.. ...
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~--~~~ 149 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD--QVD 149 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE--EES
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee--ccc
Confidence 468999999988876643321 1 222222222678887532111 12235688888753 3333211 011
Q ss_pred cceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeC--CCCeeEEc--ccccCC-cceeEEEEEEeCCEEEEEcCCCCC
Q psy9754 137 MGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDP--RTNTWTTL--ATKLRY-PRYLATLVSVNNEKLYIIGGASQT 209 (306)
Q Consensus 137 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~--~~~~W~~~--~~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~ 209 (306)
.....+.. ++.+|+.... .+.+++||. ++...... ....+. ...-.+++...++.||+.....
T Consensus 150 ~pngi~~spdg~~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-- 219 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-- 219 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT--
T ss_pred cccceEEcCCCCEEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC--
Confidence 11223332 3468877532 256788875 45543221 011111 1122234444568898875321
Q ss_pred CCCCcccccccceeeEEECCCCceEecccCCcccccceeeee---CCEEEEEeCcc
Q psy9754 210 DATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL---SSQILIIGGVT 262 (306)
Q Consensus 210 ~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~---~~~i~v~GG~~ 262 (306)
..+.+||+++.+....-.+|..+. .+++.. .+.|||.....
T Consensus 220 -----------~~v~~~d~~tG~~~~~i~~p~~~~-t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 -----------GRVIRLDPVTGKRLQTVKLPVDKT-TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------TEEEEECTTTCCEEEEEECSSSBE-EEEEEESGGGCEEEEEEBCT
T ss_pred -----------CEEEEEcCCCceEEEEEECCCCCc-eEEEEeCCCCCEEEEEcCCc
Confidence 458999998777554444443222 223332 24789887654
No 120
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.37 E-value=0.27 Score=40.81 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=66.9
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT 177 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 177 (306)
+.+++.|+.+ ..+.+||..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+..||+.+..-.
T Consensus 210 g~~l~sgs~D-----g~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D--------~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 210 GNTFVSGGCD-----KKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDD--------ATCRLYDLRADREV 275 (354)
T ss_dssp CCEEEEEETT-----SCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCcEE
Confidence 4677777755 4577889888764332111 11111122222 45566666543 46788998876533
Q ss_pred EcccccCCcceeE-EEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee--CCE
Q psy9754 178 TLATKLRYPRYLA-TLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQ 254 (306)
Q Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~ 254 (306)
..... ....... ++....++.+++.|+.. ..+.+||..+.+- +..+........++.+ ++.
T Consensus 276 ~~~~~-~~~~~~~~~~~~s~~g~~l~~g~~d-------------~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 276 AIYSK-ESIIFGASSVDFSLSGRLLFAGYND-------------YTINVWDVLKGSR--VSILFGHENRVSTLRVSPDGT 339 (354)
T ss_dssp EEECC-TTCCSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCSE--EEEECCCSSCEEEEEECTTSS
T ss_pred EEEcC-CCcccceeEEEEeCCCCEEEEEECC-------------CcEEEEECCCCce--EEEEECCCCcEEEEEECCCCC
Confidence 32111 1111122 23333357777776643 4678899865542 2222111111122222 777
Q ss_pred EEEEeCcc
Q psy9754 255 ILIIGGVT 262 (306)
Q Consensus 255 i~v~GG~~ 262 (306)
.++.|+.+
T Consensus 340 ~l~sgs~D 347 (354)
T 2pbi_B 340 AFCSGSWD 347 (354)
T ss_dssp CEEEEETT
T ss_pred EEEEEcCC
Confidence 77887766
No 121
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.37 E-value=0.35 Score=41.47 Aligned_cols=173 Identities=9% Similarity=0.058 Sum_probs=84.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEEC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIN 145 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~ 145 (306)
..+..||..+.+-...-...... ..+++.. ++..++.|+.+ ..+.+||..+++-.. .+............+
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISASMD-----TTIRIWDLENGELMY--TLQGHTALVGLLRLS 361 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEE--EECCCSSCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEE--EEeCCCCcEEEEEEc
Confidence 45788888776532221111111 2223333 55666666654 457889988776322 121111122233344
Q ss_pred CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeE
Q psy9754 146 DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDV 225 (306)
Q Consensus 146 ~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~ 225 (306)
+..++.|+.+ +.+..||+.+..-... ... ..... ..+...++.+++.|+ . ..+.+
T Consensus 362 ~~~l~s~s~d--------g~v~vwd~~~~~~~~~-~~~-~~~~~-~~~~~~~~~~l~~~~-d-------------g~i~i 416 (464)
T 3v7d_B 362 DKFLVSAAAD--------GSIRGWDANDYSRKFS-YHH-TNLSA-ITTFYVSDNILVSGS-E-------------NQFNI 416 (464)
T ss_dssp SSEEEEEETT--------SEEEEEETTTCCEEEE-EEC-TTCCC-EEEEEECSSEEEEEE-T-------------TEEEE
T ss_pred CCEEEEEeCC--------CcEEEEECCCCceeee-ecC-CCCcc-EEEEEeCCCEEEEec-C-------------CeEEE
Confidence 5555555533 5688999887653222 111 11121 223333467767665 2 46899
Q ss_pred EECCCCceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeec
Q psy9754 226 FVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 226 y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
||..+.+-......+....-.+++.-++.+++.++.+.. .-++++|.
T Consensus 417 wd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~-----~~i~~ldf 463 (464)
T 3v7d_B 417 YNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQ-----SFLEILDF 463 (464)
T ss_dssp EETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTE-----EEEEEEEC
T ss_pred EECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCe-----EEEEEeec
Confidence 999887755332222222222233335555555554431 34555553
No 122
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.35 E-value=0.071 Score=44.43 Aligned_cols=174 Identities=13% Similarity=0.044 Sum_probs=83.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-C-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-eeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-L-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-AVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-~~~~ 143 (306)
..+..+|..+++-...-...... ..+++.. + +.+++.++.+ ..+.+||..+.+-............. .++.
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~~-v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~ 234 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSSE-VNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTW 234 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhh
Confidence 35777888776543221111111 1222222 3 3466666654 34677888776532222221111111 2222
Q ss_pred E--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE-EcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcccccc
Q psy9754 144 I--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT-TLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 144 ~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~ 219 (306)
. ++.+++.|+.+ ..+..||+.+.+-. .+ .....+ . .+++...++ ++++.|+..
T Consensus 235 sp~~~~~la~g~~d--------~~i~~wd~~~~~~~~~~-~~~~~~-v-~~l~~sp~~~~~lasgs~D------------ 291 (357)
T 4g56_B 235 HPEKDDTFACGDET--------GNVSLVNIKNPDSAQTS-AVHSQN-I-TGLAYSYHSSPFLASISED------------ 291 (357)
T ss_dssp CTTSTTEEEEEESS--------SCEEEEESSCGGGCEEE-CCCSSC-E-EEEEECSSSSCCEEEEETT------------
T ss_pred hhcccceEEEeecc--------cceeEEECCCCcEeEEE-ecccee-E-EEEEEcCCCCCEEEEEeCC------------
Confidence 2 35666666533 46788888765422 22 111111 1 122222233 555556543
Q ss_pred cceeeEEECCCCceEecccCCcccccceeee--eCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASV--LSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
..+.+||..+.+.... +.....-.+++. .++.+++.||.+ ..+.+||+.+
T Consensus 292 -~~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~D-------g~v~iW~~~~ 343 (357)
T 4g56_B 292 -CTVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWD-------HKVLHHHLPS 343 (357)
T ss_dssp -SCEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETT-------SCEEEEECC-
T ss_pred -CEEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCC-------CeEEEEECCC
Confidence 4578898877653322 211111122332 267888888877 5788888754
No 123
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.35 E-value=0.15 Score=43.59 Aligned_cols=177 Identities=8% Similarity=-0.005 Sum_probs=86.4
Q ss_pred ceEEEEeCCCCCeeeCCCC-CCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccccc-ceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNM-TYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARM-GMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~-~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~-~~~~~ 142 (306)
..+..+|..+++-..+-.+ .....-.+++.. ++.+++.|+.+ ..+-++|..++..+.+........ ...+.
T Consensus 142 g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 142 GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILRVFASSDTINIWFCSLD 216 (435)
T ss_dssp SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence 4577788776654332221 111222233332 45666666655 346778988776655433222111 11222
Q ss_pred E-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-C-CEEEEEcCCCCCCCCCcccccc
Q psy9754 143 E-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-N-EKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 143 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~-~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
. -++.+++.|+.+ ..+..+|+....-..+ ... ......+.+. + ..+++.|+..
T Consensus 217 ~~~~~~~l~~g~~d--------g~i~~wd~~~~~~~~~-~~h---~~~v~~v~~~p~~~~~~~s~s~d------------ 272 (435)
T 4e54_B 217 VSASSRMVVTGDNV--------GNVILLNMDGKELWNL-RMH---KKKVTHVALNPCCDWFLATASVD------------ 272 (435)
T ss_dssp EETTTTEEEEECSS--------SBEEEEESSSCBCCCS-BCC---SSCEEEEEECTTCSSEEEEEETT------------
T ss_pred ECCCCCEEEEEeCC--------CcEeeeccCcceeEEE-ecc---cceEEeeeecCCCceEEEEecCc------------
Confidence 2 256666766533 5688888776543333 111 1112223332 2 3466666543
Q ss_pred cceeeEEECCCCceEec-ccC-Ccccccceeee-eCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 220 VSDLDVFVSNEKEWKFV-TEL-VVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~-~~~-p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
..+.+||+.+.+-... ... .....-.+++. -++..++.|+.+ ..+.+||..+.
T Consensus 273 -~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D-------~~i~iwd~~~~ 328 (435)
T 4e54_B 273 -QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK-------SEIRVYSASQW 328 (435)
T ss_dssp -SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS-------SCEEEEESSSS
T ss_pred -ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC-------CEEEEEECCCC
Confidence 4567888865542211 111 11111112222 267777777766 46778887653
No 124
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.31 E-value=0.16 Score=47.24 Aligned_cols=177 Identities=8% Similarity=0.024 Sum_probs=86.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~ 144 (306)
..+..||..+++....-...... -.+++.. +++.++.|+.+ ..+.+||..+++... +...... -..++..
T Consensus 35 g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~--v~~~~~s 106 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAHPDY--IRSIAVH 106 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEECCSSC--EEEEEEC
T ss_pred CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEecCCCC--EEEEEEe
Confidence 46788888776543221111111 1222222 56666666643 568889988876432 2211111 1122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCC-eeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccc
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTN-TWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVS 221 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~ 221 (306)
++...+.|+.+ ..+..||..+. .......... ... .++.... ++.+++.++.. .
T Consensus 107 ~~~~~l~~~~~d--------g~i~vw~~~~~~~~~~~~~~~~-~~v-~~~~~~p~~~~~l~~~~~d-------------g 163 (814)
T 3mkq_A 107 PTKPYVLSGSDD--------LTVKLWNWENNWALEQTFEGHE-HFV-MCVAFNPKDPSTFASGCLD-------------R 163 (814)
T ss_dssp SSSSEEEEEETT--------SEEEEEEGGGTSEEEEEEECCS-SCE-EEEEEETTEEEEEEEEETT-------------S
T ss_pred CCCCEEEEEcCC--------CEEEEEECCCCceEEEEEcCCC-CcE-EEEEEEcCCCCEEEEEeCC-------------C
Confidence 44444455422 56888888765 3322211111 111 2222222 35677776654 5
Q ss_pred eeeEEECCCCceEecccCCcccccceeee-e--CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 222 DLDVFVSNEKEWKFVTELVVPRHAHSASV-L--SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 222 ~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+.+||+.+..-..............++. . ++..+++|+.+ ..+.+||..+++
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~ 219 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-------LTIKIWDYQTKS 219 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-------SEEEEEETTTTE
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-------CEEEEEECCCCc
Confidence 67888886554222111111111122222 2 67777777766 467788876654
No 125
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.19 Score=46.52 Aligned_cols=181 Identities=11% Similarity=0.106 Sum_probs=91.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCcc-ceeeEEE-C--CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceee-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRK-IFSFVSC-L--DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAV- 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~- 141 (306)
..+..||..++++..+..+..... -.+++.. + +..++.|+.+ ..+.+||..++++..+..+.........
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcccccccccCCCCCeEEE
Confidence 456667766566655443332221 2222322 3 6677777754 4577889888887666544322222222
Q ss_pred EEE-C--CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-------------CCEEEEEcC
Q psy9754 142 AEI-N--DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-------------NEKLYIIGG 205 (306)
Q Consensus 142 ~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-------------~~~iyi~GG 205 (306)
+.. + +.+++.|+.+ +.+..||..+..-............-.++.... ++.+++.|+
T Consensus 106 ~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs 177 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (753)
T ss_dssp EECCGGGCSEEEEEETT--------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEE
T ss_pred EECCCCCCCEEEEEeCC--------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE
Confidence 222 2 5566666533 567888877663211100000111111122211 256666666
Q ss_pred CCCCCCCCcccccccceeeEEECCCC--ceEecccCCcccccc-eeeee-C---CEEEEEeCccCccccccceEEEeecc
Q psy9754 206 ASQTDATNTQKMYSVSDLDVFVSNEK--EWKFVTELVVPRHAH-SASVL-S---SQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~y~~~~~--~W~~~~~~p~~~~~~-~~~~~-~---~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
.. ..+.+||..+. .+..+..+....... +++.. + +.+++.|+.+ ..+.+||+.
T Consensus 178 ~d-------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-------g~I~iwd~~ 237 (753)
T 3jro_A 178 AD-------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-------RTCIIWTQD 237 (753)
T ss_dssp TT-------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-------SCEEEEEES
T ss_pred CC-------------CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-------CEEEEecCC
Confidence 53 45677777544 344333332222222 22222 4 7888888877 468899987
Q ss_pred cc
Q psy9754 279 RQ 280 (306)
Q Consensus 279 ~~ 280 (306)
+.
T Consensus 238 ~~ 239 (753)
T 3jro_A 238 NE 239 (753)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 126
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.28 E-value=0.25 Score=41.67 Aligned_cols=179 Identities=12% Similarity=0.112 Sum_probs=83.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI- 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~- 144 (306)
..+..+|..+++-...-... ...-.+++.. ++..++.|+.+ ..+.++|..+++....-..... -..++..
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~ 216 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLTLSIEDG--VTTVAVSP 216 (393)
T ss_dssp SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEECS
T ss_pred CeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEEEEcCCC--cEEEEEEC
Confidence 45778888776543221111 1111222222 45555666544 4577889888764432221111 1122222
Q ss_pred -CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccC-----CcceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 145 -NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLR-----YPRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 145 -~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~-----~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
++++++.|+.+ ..+..||..+..-........ ....-.++....+++.++.|+..
T Consensus 217 ~~~~~l~~~s~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d----------- 277 (393)
T 1erj_A 217 GDGKYIAAGSLD--------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD----------- 277 (393)
T ss_dssp TTCCEEEEEETT--------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCCEEEEEcCC--------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC-----------
Confidence 56677776643 467888988775432201100 01111223333456777776654
Q ss_pred ccceeeEEECCCCceEecccCC----------cccc-cceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELV----------VPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p----------~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+..-......+ .... -.+++.. ++..++.|+.+ ..+.+||.++.+
T Consensus 278 --~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-------~~v~iwd~~~~~ 343 (393)
T 1erj_A 278 --RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-------RGVLFWDKKSGN 343 (393)
T ss_dssp --SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-------SEEEEEETTTCC
T ss_pred --CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCe
Confidence 46778887643211110000 0000 0112222 56667777766 578899987655
No 127
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.28 E-value=0.23 Score=40.13 Aligned_cols=176 Identities=11% Similarity=0.108 Sum_probs=80.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEE-eccCCcccccceeeEEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWE-DVAPLKIARMGMAVAEI- 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~- 144 (306)
..+..+|..+++-...-.............-++++++.|+.+ ..+.+||..+++-. .+.... ..-..++..
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~ 107 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAHP--DYIRSIAVHP 107 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEECCS--SCEEEEEECS
T ss_pred CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEEEEeCCC--CcEEEEEEcC
Confidence 457778887765322111111111111222255666666644 45778888876532 121111 111122222
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe-e-EEcccccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCccccccc
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-W-TTLATKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W-~~~~~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
++.+++.|+.+ ..+..+|..+.. - ..+ ... ... ...+.+. ++.+++.|+..
T Consensus 108 ~~~~l~sgs~D--------~~v~lWd~~~~~~~~~~~-~~h--~~~-v~~v~~~p~~~~~l~sgs~D------------- 162 (304)
T 2ynn_A 108 TKPYVLSGSDD--------LTVKLWNWENNWALEQTF-EGH--EHF-VMCVAFNPKDPSTFASGCLD------------- 162 (304)
T ss_dssp SSSEEEEEETT--------SCEEEEEGGGTTEEEEEE-CCC--CSC-EEEEEECTTCTTEEEEEETT-------------
T ss_pred CCCEEEEECCC--------CeEEEEECCCCcchhhhh-ccc--CCc-EEEEEECCCCCCEEEEEeCC-------------
Confidence 45555566533 457788876552 1 112 111 111 1223332 35677777654
Q ss_pred ceeeEEECCCCceEecccCCcccccceeee--e-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASV--L-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~--~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+..-...-.....+....... . ++.+++.|+.+ ..+.+||.++.+
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D-------~~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-------LTIKIWDYQTKS 219 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT-------SEEEEEETTTTE
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC-------CeEEEEeCCCCc
Confidence 567888876443111000001111111111 1 45666666665 467788876654
No 128
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.27 E-value=0.34 Score=39.01 Aligned_cols=186 Identities=9% Similarity=0.072 Sum_probs=94.9
Q ss_pred eceEEEEeCCCCCeeeCCCCC---CCccceeeEEE-C-CEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCccc--cc
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMT---YPRKIFSFVSC-L-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIA--RM 137 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~---~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~--~~ 137 (306)
...+++||+.++++..+.... ....-..++.. + +.||+.... ..+.+||+. ++.+.+ ...... ..
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 457999999888886553210 11112233332 5 789988641 368899998 777665 332211 11
Q ss_pred -ceeeEE-ECCEEEEEcccCCC-------CCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE----eCC-EEEEE
Q psy9754 138 -GMAVAE-INDKIWIAGGYTGD-------KMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV----NNE-KLYII 203 (306)
Q Consensus 138 -~~~~~~-~~~~iyv~GG~~~~-------~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~----~~~-~iyi~ 203 (306)
-..++. -++++|+....... ........++++|++ .+...+......+ ...+.. .++ .||+.
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEE
Confidence 112222 36788887542210 000013578999987 5555442222222 233344 434 57776
Q ss_pred cCCCCCCCCCcccccccceeeEEECC-CCceEe---cccCCcc--cccceeeee-CCEEEEEeCccCccccccceEEEee
Q psy9754 204 GGASQTDATNTQKMYSVSDLDVFVSN-EKEWKF---VTELVVP--RHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWC 276 (306)
Q Consensus 204 GG~~~~~~~~~~~~~~~~~~~~y~~~-~~~W~~---~~~~p~~--~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd 276 (306)
.... ..+++||++ +.+... ...++.. ..-.+++.- ++++|+..... +.+.+||
T Consensus 194 ~~~~-------------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~-------~~i~~~d 253 (314)
T 1pjx_A 194 ETPT-------------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS-------SHIEVFG 253 (314)
T ss_dssp ETTT-------------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-------TEEEEEC
T ss_pred ECCC-------------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-------CEEEEEc
Confidence 5332 467888875 343321 1122211 111223322 67888875333 4688888
Q ss_pred ccccce
Q psy9754 277 FDRQAW 282 (306)
Q Consensus 277 ~~~~~W 282 (306)
+++++-
T Consensus 254 ~~~g~~ 259 (314)
T 1pjx_A 254 PDGGQP 259 (314)
T ss_dssp TTCBSC
T ss_pred CCCCcE
Confidence 875543
No 129
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.34 Score=39.67 Aligned_cols=148 Identities=19% Similarity=0.211 Sum_probs=69.4
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccc-eeeEEEC---CEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMG-MAVAEIN---DKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~-~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
++.+++.|+.+ ..+.++|..+..|+.+..+...... ..+.... +..++.|+.+ ..+..+|..+
T Consensus 164 ~~~~l~s~s~D-----~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D--------~~v~iw~~~~ 230 (330)
T 2hes_X 164 SEALLASSSYD-----DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD--------STVRVWKYMG 230 (330)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT--------SCEEEEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC--------CeEEEEEecC
Confidence 56666777755 3466677777766655443321111 1122222 3344445433 3345555432
Q ss_pred ------CeeEEcccccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccc--
Q psy9754 174 ------NTWTTLATKLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRH-- 244 (306)
Q Consensus 174 ------~~W~~~~~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~-- 244 (306)
..|... ..++. -......+...++.+++.||.. ..+.+||..+..|+.+........
T Consensus 231 ~~~~~~~~~~~~-~~~~~~h~~~v~~v~~s~~~~l~s~~~d-------------g~v~iw~~~~~~~~~~~~~~~~h~~~ 296 (330)
T 2hes_X 231 DDEDDQQEWVCE-AILPDVHKRQVYNVAWGFNGLIASVGAD-------------GVLAVYEEVDGEWKVFAKRALCHGVY 296 (330)
T ss_dssp ECTTSCEEEEEE-EECCSCCSSCEEEEEECTTSCEEEEETT-------------SCEEEEEEETTEEEEEEEESCTTTTS
T ss_pred CCccccceeEEe-eecccccccceEEEEEcCCCEEEEEeCC-------------CEEEEEEcCCCceEEEeccccccccc
Confidence 235443 22211 1111122233334455666543 457888888888865543221111
Q ss_pred cc-eeeee---CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 245 AH-SASVL---SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 245 ~~-~~~~~---~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.. +++.. ++++++.|+.+ ..+.+||+++
T Consensus 297 ~v~~v~~~~~~~~~~las~s~D-------g~v~~W~~~~ 328 (330)
T 2hes_X 297 EINVVKWLELNGKTILATGGDD-------GIVNFWSLEK 328 (330)
T ss_dssp CEEEEEEC-----CCEEEEETT-------SEEEEEEC--
T ss_pred eEEEEEEecCCCceEEEEecCC-------CcEEEEEecc
Confidence 11 12221 46778888777 5788888764
No 130
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.23 E-value=0.5 Score=43.95 Aligned_cols=149 Identities=10% Similarity=0.048 Sum_probs=81.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccc-eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMG-MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++.||+..-. .-+.+||+.+++++...... ..... .+++.. ++.|++-. . ...+.+||+++.
T Consensus 373 ~g~lWigt~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt--~-------~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 373 QGKLWIGTDG------GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT--Y-------LGNISYYNTRLK 437 (781)
T ss_dssp TSCEEEEEBS------SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE--T-------TEEEEEECSSSC
T ss_pred CCCEEEEeCC------CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe--c-------cCCEEEEcCCCC
Confidence 4688876311 33778899887776653111 11111 122222 57788732 1 256899999999
Q ss_pred eeEEcccccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc---c-cccceee
Q psy9754 175 TWTTLATKLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV---P-RHAHSAS 249 (306)
Q Consensus 175 ~W~~~~~~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~---~-~~~~~~~ 249 (306)
+++.. .....+ ..-.+++...++.|++... ..+++||+.+++|+.....+. . ....+++
T Consensus 438 ~~~~~-~~~~~~~~~v~~i~~d~~g~lwigt~---------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 501 (781)
T 3v9f_A 438 KFQII-ELEKNELLDVRVFYEDKNKKIWIGTH---------------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA 501 (781)
T ss_dssp EEEEC-CSTTTCCCCEEEEEECTTSEEEEEET---------------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred cEEEe-ccCCCCCCeEEEEEECCCCCEEEEEC---------------CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence 99887 321111 1222333444578887432 347899999888876653321 0 1111222
Q ss_pred e-eCCEEEEEeCccCccccccceEEEeeccccceecc
Q psy9754 250 V-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKG 285 (306)
Q Consensus 250 ~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~ 285 (306)
. -++.|++... . ..+++||+++++++.+
T Consensus 502 ~d~~g~lWigt~-~-------~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 502 QDSEGRFWIGTF-G-------GGVGIYTPDMQLVRKF 530 (781)
T ss_dssp ECTTCCEEEEES-S-------SCEEEECTTCCEEEEE
T ss_pred EcCCCCEEEEEc-C-------CCEEEEeCCCCeEEEc
Confidence 2 2667776532 1 2477888888777653
No 131
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.22 E-value=0.17 Score=41.48 Aligned_cols=181 Identities=12% Similarity=0.089 Sum_probs=87.3
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-C---CEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccccce
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-L---DKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIARMGM 139 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~~~~ 139 (306)
...+..||..+++............-.+++.. + +.+++.|+.+ ..+.+||..+.+ ...+..........
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~v~~~ 117 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMPVYSVKGHKEIINAI 117 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSCSEEECCCSSCEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCccEEEEEecccceEEE
Confidence 35677888887765433222211112222222 2 4666666654 447778887665 12222111111111
Q ss_pred e-----eEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCC-cceeEEEE----EEeCCEEEEEcCCC
Q psy9754 140 A-----VAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRY-PRYLATLV----SVNNEKLYIIGGAS 207 (306)
Q Consensus 140 ~-----~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~-~~~~~~~~----~~~~~~iyi~GG~~ 207 (306)
. +..-++.+++.|+.+ ..+..||+.+.. ...+...... .+...++. ...++.+++.|+..
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d--------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 189 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRD--------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN 189 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETT--------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT
T ss_pred eeccccccCCCccEEEEEeCC--------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC
Confidence 1 011245555666533 468888888764 3333111111 11111222 11346777776543
Q ss_pred CCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee----CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 208 QTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL----SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~----~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||+.+.+-....... ....+++.. ++..+++|+.+ ..+.+||+++.+
T Consensus 190 -------------~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~ 245 (357)
T 3i2n_A 190 -------------GDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLE-------GKFHVFDMRTQH 245 (357)
T ss_dssp -------------SEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEEST-------TEEEEEEEEEEE
T ss_pred -------------CeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCC-------CeEEEEeCcCCC
Confidence 56889998876643222211 112222222 56777777665 467788876643
No 132
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.22 E-value=0.14 Score=42.84 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=28.6
Q ss_pred ceeeEEECCCCceEecccCCcccc-cceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||..+.+-.. .+..... -.+++.. ++.+++.|+.+ ..+.+||+++.+
T Consensus 314 ~~i~v~d~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d-------g~i~iw~~~~~~ 367 (408)
T 4a11_B 314 STIAVYTVYSGEQIT--MLKGHYKTVDCCVFQSNFQELYSGSRD-------CNILAWVPSLYE 367 (408)
T ss_dssp TEEEEEETTTCCEEE--EECCCSSCEEEEEEETTTTEEEEEETT-------SCEEEEEECC--
T ss_pred CEEEEEECcCCccee--eeccCCCeEEEEEEcCCCCEEEEECCC-------CeEEEEeCCCCC
Confidence 457788877654332 2211111 1122222 67888888777 468888887654
No 133
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.19 E-value=0.24 Score=40.72 Aligned_cols=95 Identities=8% Similarity=0.017 Sum_probs=47.4
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCcccccc-eeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIARMG-MAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~~~~-~~~~ 142 (306)
..+..||..+++-...-.. ....-.++... ++.+++.|+.+ ..+.+||..+++-... ..+...... ..++
T Consensus 95 g~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp CEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred CEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 4678888877653221110 11112222222 45677777654 4578889987764332 211111111 1222
Q ss_pred EE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 143 EI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 143 ~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
.. ++..++.|+.+ +.+..||+.+.+
T Consensus 169 ~~~~~~~l~~~~~d--------g~i~i~d~~~~~ 194 (366)
T 3k26_A 169 YDLLGEKIMSCGMD--------HSLKLWRINSKR 194 (366)
T ss_dssp ECTTSSEEEEEETT--------SCEEEEESCSHH
T ss_pred ECCCCCEEEEecCC--------CCEEEEECCCCc
Confidence 22 45555666533 467888887654
No 134
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.18 E-value=0.39 Score=38.95 Aligned_cols=144 Identities=11% Similarity=0.091 Sum_probs=69.6
Q ss_pred EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEE
Q psy9754 100 KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTT 178 (306)
Q Consensus 100 ~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~ 178 (306)
.+++.++.+ ..+.++|..+.+....-..... .-.+++. -++.+++.|+.+ ..+..||+.+..-..
T Consensus 186 ~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D--------g~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 186 PIIVSCGWD-----KLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKD--------GQAMLWDLNEGKHLY 251 (340)
T ss_dssp CEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT--------CEEEEEETTTTEEEE
T ss_pred cEEEEEcCC-----CEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCC--------CeEEEEEeccCceee
Confidence 455556544 3467788887764332111111 1112222 246666666543 467888888765332
Q ss_pred cccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe-ccc-C-C----ccccc-ceeee
Q psy9754 179 LATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF-VTE-L-V----VPRHA-HSASV 250 (306)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~-~~~-~-p----~~~~~-~~~~~ 250 (306)
. ... ...-..+.... +..++.++.. ..+.+||..+..-.. +.. . . ..... .+++.
T Consensus 252 ~-~~~--~~~v~~~~~~~-~~~~~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 252 T-LDG--GDIINALCFSP-NRYWLCAATG-------------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp E-EEC--SSCEEEEEECS-SSSEEEEEET-------------TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred e-ecC--CceEEeeecCC-CCceeeccCC-------------CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence 2 111 11112233333 3334444432 457788877654321 111 0 0 00111 12222
Q ss_pred -eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 251 -LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 251 -~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+++.++.|+.+ ..|.+||+++++
T Consensus 315 s~dg~~l~sgs~D-------g~v~iW~~~tGt 339 (340)
T 4aow_A 315 SADGQTLFAGYTD-------NLVRVWQVTIGT 339 (340)
T ss_dssp CTTSSEEEEEETT-------SCEEEEEEEC--
T ss_pred CCCCCEEEEEeCC-------CEEEEEeCCCcC
Confidence 277888888877 578899998764
No 135
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.17 E-value=0.39 Score=38.83 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=18.9
Q ss_pred CCEEEEEeCccCccccccceEEEeecccc-ceec
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQ-AWIK 284 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~-~W~~ 284 (306)
++++++.|+.+ ..+.+||.+++ .|..
T Consensus 317 ~~~~l~s~~~d-------g~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 317 TGTILSSAGDD-------GKVRLWKATYSNEFKC 343 (351)
T ss_dssp SSCCEEEEETT-------SCEEEEEECTTSCEEE
T ss_pred CCCEEEEecCC-------CcEEEEecCcCcchhh
Confidence 67778888776 57889998764 4544
No 136
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.16 E-value=0.43 Score=39.18 Aligned_cols=154 Identities=11% Similarity=0.160 Sum_probs=79.8
Q ss_pred CCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-c-cccceeeEEECCEEEEE
Q psy9754 75 NNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-I-ARMGMAVAEINDKIWIA 151 (306)
Q Consensus 75 ~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~-~~~~~~~~~~~~~iyv~ 151 (306)
.-.+|+.+.. +......++... ++.+|++|.. ..+++-.-...+|+.+.... . ......+...++.+|++
T Consensus 23 ~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~ 95 (327)
T 2xbg_A 23 DYNPWEAIQL-PTTATILDMSFIDRHHGWLVGVN------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIV 95 (327)
T ss_dssp SSCCEEEEEC-SCSSCEEEEEESSSSCEEEEETT------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEE
T ss_pred CCCCceEeec-CCCCcEEEEEECCCCcEEEEcCC------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEE
Confidence 3467988763 333333333333 4678886531 23444444456899875321 1 22223344456788887
Q ss_pred cccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCC
Q psy9754 152 GGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK 231 (306)
Q Consensus 152 GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~ 231 (306)
|. ...+++-+-.-.+|+.+......+.....++...++.+|+.+.. ..+++-.=.-.
T Consensus 96 g~---------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------g~v~~S~DgG~ 152 (327)
T 2xbg_A 96 GE---------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV--------------GAIYRTKDSGK 152 (327)
T ss_dssp EE---------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT--------------CCEEEESSTTS
T ss_pred EC---------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC--------------ccEEEEcCCCC
Confidence 52 13455543345689998422222222234444556888887642 12333222356
Q ss_pred ceEecccCCcccccceeeee-CCEEEEEe
Q psy9754 232 EWKFVTELVVPRHAHSASVL-SSQILIIG 259 (306)
Q Consensus 232 ~W~~~~~~p~~~~~~~~~~~-~~~i~v~G 259 (306)
+|+.+...... ..++++.. ++.++++|
T Consensus 153 tW~~~~~~~~~-~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 153 NWQALVQEAIG-VMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp SEEEEECSCCC-CEEEEEECTTSCEEEEE
T ss_pred CCEEeecCCCc-ceEEEEEcCCCcEEEEE
Confidence 89988653322 23344333 56777665
No 137
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.15 E-value=0.22 Score=41.63 Aligned_cols=151 Identities=9% Similarity=0.046 Sum_probs=72.8
Q ss_pred EEEEEccCCCCCCCceeEEEeCCCCc------EEeccCCccc---ccceeeEEE-----CCEE-EEEcccCCCCCCCCCc
Q psy9754 100 KIYAIGGQDCKTLLSSVECYDPVAHT------WEDVAPLKIA---RMGMAVAEI-----NDKI-WIAGGYTGDKMNPVTD 164 (306)
Q Consensus 100 ~iyv~GG~~~~~~~~~~~~~d~~~~~------w~~~~~~~~~---~~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~ 164 (306)
.+++.|+.+ ..+.+||..+++ +..+...+.. ..-..++.. ++.. ++.|+.+ +
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d--------g 148 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK--------G 148 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT--------S
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC--------C
Confidence 777777754 346777777665 5555544211 111222333 3455 6666533 4
Q ss_pred cEEEEeCCC------Ce---eE---Eccc----ccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEEC
Q psy9754 165 KVECYDPRT------NT---WT---TLAT----KLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVS 228 (306)
Q Consensus 165 ~~~~~d~~~------~~---W~---~~~~----~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~ 228 (306)
.+..||..+ .. |. .+.. .......-.++....++ +++.|+.. ..+.+||+
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-------------g~i~i~d~ 214 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-------------GTVQISEL 214 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-------------SEEEEEET
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-------------CcEEEEEC
Confidence 567777665 22 11 1100 00011112233344456 66666643 56889998
Q ss_pred CCCceEecccC---C-c-ccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 229 NEKEWKFVTEL---V-V-PRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 229 ~~~~W~~~~~~---p-~-~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+.+-...-.. . . ...-.+++.. ++.+++.|+.+. ....+.+||+.+.+
T Consensus 215 ~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 215 STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----SFGCITLYETEFGE 269 (397)
T ss_dssp TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET----TEEEEEEEETTTCC
T ss_pred CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC----CCceEEEEECCCCc
Confidence 87653322111 1 0 1111222222 677777776551 11368888887654
No 138
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.15 E-value=0.15 Score=41.89 Aligned_cols=62 Identities=23% Similarity=0.165 Sum_probs=34.3
Q ss_pred CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE--ecccCCcc---cccceeeee-CCEEEEEeCccCccccccce
Q psy9754 198 EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK--FVTELVVP---RHAHSASVL-SSQILIIGGVTTVYKRTLKS 271 (306)
Q Consensus 198 ~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~--~~~~~p~~---~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~ 271 (306)
+.+++.|+.. ..+.+||+.+.+-. .+..+... ..-.+++.. ++++++.|+.+ ..
T Consensus 299 ~~~l~~~~~d-------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-------g~ 358 (366)
T 3k26_A 299 QKMLALGNQV-------------GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD-------AS 358 (366)
T ss_dssp SSEEEEECTT-------------SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-------SE
T ss_pred CcEEEEEecC-------------CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCC-------CE
Confidence 6677777654 46788998765421 11122211 111122222 77888888877 57
Q ss_pred EEEeeccc
Q psy9754 272 VECWCFDR 279 (306)
Q Consensus 272 ~~~yd~~~ 279 (306)
+.+||+.+
T Consensus 359 i~iwd~~~ 366 (366)
T 3k26_A 359 IWRWDRLR 366 (366)
T ss_dssp EEEEEC--
T ss_pred EEEEEecC
Confidence 88998753
No 139
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.14 E-value=0.53 Score=40.03 Aligned_cols=189 Identities=10% Similarity=-0.077 Sum_probs=98.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
...++.+|.....-..+... .....+++.. +++.+++++.+. ....++++|..+++...+...+... ...+..
T Consensus 158 ~~~i~i~d~~g~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~l~~~~~~~--~~~~~s 231 (415)
T 2hqs_A 158 PYELRVSDYDGYNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQVASFPRHN--GAPAFS 231 (415)
T ss_dssp CEEEEEEETTSCSCEEEEEE--SSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEEEECCSSCE--EEEEEC
T ss_pred cceEEEEcCCCCCCEEEeCC--CCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEEeecCCCcc--cCEEEc
Confidence 36889999875443333211 1112222222 555555554332 1267899999998877665433211 122222
Q ss_pred -CC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 145 -ND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 145 -~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
++ +|++.+.... ...++.+|+.+.+...+ ..... .........+++.++++..... ...
T Consensus 232 pdg~~la~~~~~~g------~~~i~~~d~~~~~~~~l-~~~~~--~~~~~~~spdg~~l~~~s~~~g----------~~~ 292 (415)
T 2hqs_A 232 PDGSKLAFALSKTG------SLNLYVMDLASGQIRQV-TDGRS--NNTEPTWFPDSQNLAFTSDQAG----------RPQ 292 (415)
T ss_dssp TTSSEEEEEECTTS------SCEEEEEETTTCCEEEC-CCCSS--CEEEEEECTTSSEEEEEECTTS----------SCE
T ss_pred CCCCEEEEEEecCC------CceEEEEECCCCCEEeC-cCCCC--cccceEECCCCCEEEEEECCCC----------CcE
Confidence 44 4555543321 25699999998887776 33221 1122333335654444432111 146
Q ss_pred eeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccccceecc
Q psy9754 223 LDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIKG 285 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~ 285 (306)
++++|+.+.+-..+... ......++. -+++.+++++.... ...++++|+++++...+
T Consensus 293 i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g----~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 293 VYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG----QQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS----CEEEEEEETTTCCEEEC
T ss_pred EEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC----ceEEEEEECCCCCEEEe
Confidence 88899887765444321 111112222 26665555544311 25799999998887663
No 140
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.11 E-value=0.24 Score=41.37 Aligned_cols=203 Identities=6% Similarity=-0.083 Sum_probs=96.5
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCE-EEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDK-IYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVA 142 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 142 (306)
...++.+|+.+++...+.. ........... +++ |++............++.+|..+..++.+.............
T Consensus 167 ~~~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 3578999999887765542 12222222333 244 444432111122257899999888777665411111111112
Q ss_pred E-ECCE-EEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCc---cc
Q psy9754 143 E-INDK-IWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNT---QK 216 (306)
Q Consensus 143 ~-~~~~-iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~---~~ 216 (306)
. -+++ |++..-... .. ...++.+|+.+.+.+.+ ...+ ... ..... +++++++.+....-.... ..
T Consensus 245 ~spdg~~l~~~~~~~~-~~---~~~l~~~d~~~g~~~~l-~~~~--~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKG-QT---DRVIYKANPETLENEEV-MVMP--PCS--HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp ECTTSSCEEEEEEETT-TC---CEEEEEECTTTCCEEEE-EECC--SEE--EEEECSSSSEEEEEECCC----------C
T ss_pred ECCCCCEEEEEecCCC-Cc---cceEEEEECCCCCeEEe-eeCC--CCC--CCccCCCCceEEEecCCcceeeccccccc
Confidence 2 2444 554432211 11 24599999998877666 3322 121 33333 567666543210000000 00
Q ss_pred ccccceeeEEECCCCceEecccCCccc---------ccceeee-eCC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 217 MYSVSDLDVFVSNEKEWKFVTELVVPR---------HAHSASV-LSS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W~~~~~~p~~~---------~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
......++++|+.+.+...+...+... .....+. -++ .|++...... ...+|.+++.+..++.
T Consensus 316 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~-----~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG-----VPAIYIADVPESYKHL 389 (396)
T ss_dssp CCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS-----SCEEEEEECCTTCC--
T ss_pred cCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC-----CceEEEEEEccccccc
Confidence 001256899999887765554322210 0111222 255 4555443322 1468899988888766
No 141
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.4 Score=38.33 Aligned_cols=104 Identities=8% Similarity=0.166 Sum_probs=51.6
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++..++.++.+ ..+..||.... -..+ ... ....-.++....++. ++.|+.. ..+.
T Consensus 154 ~~~~l~~~~~d--------~~i~i~d~~~~-~~~~-~~~-~~~~i~~~~~~~~~~-~~~~~~d-------------g~i~ 208 (313)
T 3odt_A 154 SENKFLTASAD--------KTIKLWQNDKV-IKTF-SGI-HNDVVRHLAVVDDGH-FISCSND-------------GLIK 208 (313)
T ss_dssp TTTEEEEEETT--------SCEEEEETTEE-EEEE-CSS-CSSCEEEEEEEETTE-EEEEETT-------------SEEE
T ss_pred CCCEEEEEECC--------CCEEEEecCce-EEEE-ecc-CcccEEEEEEcCCCe-EEEccCC-------------CeEE
Confidence 45555555433 46778883322 2222 111 112222344445567 5555543 5688
Q ss_pred EEECCCCceEecccCCcccc-cceeeee-CCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 225 VFVSNEKEWKFVTELVVPRH-AHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
+||+.+.+-. ..+..... -.+++.. +++ ++.|+.+ ..+.+||+++.+-.
T Consensus 209 i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~-l~~~~~d-------g~v~iwd~~~~~~~ 259 (313)
T 3odt_A 209 LVDMHTGDVL--RTYEGHESFVYCIKLLPNGD-IVSCGED-------RTVRIWSKENGSLK 259 (313)
T ss_dssp EEETTTCCEE--EEEECCSSCEEEEEECTTSC-EEEEETT-------SEEEEECTTTCCEE
T ss_pred EEECCchhhh--hhhhcCCceEEEEEEecCCC-EEEEecC-------CEEEEEECCCCcee
Confidence 9998765432 22211111 1222222 444 5566655 57889998877653
No 142
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.10 E-value=0.38 Score=37.99 Aligned_cols=181 Identities=9% Similarity=-0.013 Sum_probs=96.9
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
...++++++..+.-..+.+..... -+.++.. ++.||+.... ...+.++++....-+.+...... .-..+++
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~~~-p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~-~P~~i~v 129 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDLGS-PEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLV-NPRGIVT 129 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTCCC-EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-SEEEEEE
T ss_pred CCEEEEEecCCCCcEEEEECCCCC-ccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCC-CccEEEE
Confidence 357889998765433322111111 2333333 5799998542 25688888875543333221111 1123333
Q ss_pred E--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCccccccc
Q psy9754 144 I--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 ~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
. +++||+..... . ...++++++....-+.+ ..... ..-.+++... ++.||+.....
T Consensus 130 d~~~g~lyv~~~~~---~---~~~I~~~~~dg~~~~~~-~~~~~-~~P~gia~d~~~~~lyv~d~~~------------- 188 (267)
T 1npe_A 130 DPVRGNLYWTDWNR---D---NPKIETSHMDGTNRRIL-AQDNL-GLPNGLTFDAFSSQLCWVDAGT------------- 188 (267)
T ss_dssp ETTTTEEEEEECCS---S---SCEEEEEETTSCCCEEE-ECTTC-SCEEEEEEETTTTEEEEEETTT-------------
T ss_pred eeCCCEEEEEECCC---C---CcEEEEEecCCCCcEEE-EECCC-CCCcEEEEcCCCCEEEEEECCC-------------
Confidence 3 68999975321 0 25788888765443333 11111 1122333332 37899986442
Q ss_pred ceeeEEECCCCceEec-ccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 221 SDLDVFVSNEKEWKFV-TELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~-~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..+.++|++...-..+ ..+..| .+++.-++.||+..... +.+.++|+++++-..
T Consensus 189 ~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~-------~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 189 HRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT-------NSVIAMDLAISKEMD 243 (267)
T ss_dssp TEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT-------TEEEEEETTTTEEEE
T ss_pred CEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC-------CeEEEEeCCCCCceE
Confidence 5688898875432222 122222 24445588999976544 578999998776533
No 143
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.09 E-value=0.51 Score=39.35 Aligned_cols=111 Identities=9% Similarity=0.014 Sum_probs=54.9
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCc-c---cccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLK-I---ARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~-~---~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
++ +++.|+.+ ..+.+||..+.+.... .... . ...-..++.. ++.+++.|+.+.. ...+..||+
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-----~g~i~i~d~ 265 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-----FGCITLYET 265 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----EEEEEEEET
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----CceEEEEEC
Confidence 45 66666543 5688899887653322 2100 0 1111122222 4555666653311 157899998
Q ss_pred CCCeeEEcccccC-----------CcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 172 RTNTWTTLATKLR-----------YPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 172 ~~~~W~~~~~~~~-----------~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
.+.+-........ ....-.++....++.+++.|+.. ..+.+||+.+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~ 324 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-------------GKLRFWDVKTKE 324 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-------------SEEEEEETTTTE
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-------------CeEEEEEcCCCc
Confidence 8765322201100 11111233333356676776643 568899987664
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.05 E-value=0.85 Score=41.60 Aligned_cols=193 Identities=9% Similarity=-0.035 Sum_probs=97.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCC-ccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCC-cEEeccCCcccc----cc
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYP-RKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAH-TWEDVAPLKIAR----MG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~-~w~~~~~~~~~~----~~ 138 (306)
...++.+|..+++-..+...... .....++.. +++..+++..+.......++++|..++ ..+.+....... ..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 46799999998876555432211 222222322 555444433333334467889999988 665543211111 01
Q ss_pred eeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcc
Q psy9754 139 MAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQ 215 (306)
Q Consensus 139 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~ 215 (306)
.....- ++++++.+...+ ...++.+|........+ ......... ......++ .||+.+.....
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l-~~~~~~v~~-~~~~spdg~~l~~~~~~~~~------ 379 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQV-TKGEWEVTN-FAGFDPKGTRLYFESTEASP------ 379 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEEC-CCSSSCEEE-EEEECTTSSEEEEEESSSCT------
T ss_pred CceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEec-CCCCeEEEe-eeEEcCCCCEEEEEecCCCC------
Confidence 112222 677555553321 35788888777777777 332222211 12222234 56665543211
Q ss_pred cccccceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 216 KMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
....++.+|..+...+.+.. ....+.++.- +++.+++..... ..-..++++|.++++
T Consensus 380 ---~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~---~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 ---LERHFYCIDIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSP---TVPRKVTVTNIGKGS 437 (706)
T ss_dssp ---TCBEEEEEETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECS---SCSCEEEEEESSSCE
T ss_pred ---ceEEEEEEEcCCCCceeccC---CCceEEEEECCCCCEEEEEecCC---CCCcEEEEEECCCCe
Confidence 11468888888777665542 1112233322 666555543322 112468888877665
No 145
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.04 E-value=0.57 Score=39.72 Aligned_cols=94 Identities=18% Similarity=0.176 Sum_probs=52.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCc-cceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPR-KIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
+.++.+|..+++-..+-.+.... .-.+++.. +++.++.|+.+ ..+.++|..+++-... +........+...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~h~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTSHSARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEE--EeCCCCceEEEee
Confidence 57899999998876554333222 22233333 56777777755 4578889888764322 1111112233344
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.+.+.|+.+ ..+..+|.....
T Consensus 198 ~~~~l~sgs~d--------~~i~~~d~~~~~ 220 (420)
T 4gga_A 198 NSYILSSGSRS--------GHIHHHDVRVAE 220 (420)
T ss_dssp ETTEEEEEETT--------SEEEEEETTSSS
T ss_pred CCCEEEEEeCC--------CceeEeeecccc
Confidence 56666666533 456666665443
No 146
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.03 E-value=0.47 Score=38.43 Aligned_cols=163 Identities=6% Similarity=-0.007 Sum_probs=84.9
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc---EEeccC----Cc-cc-cc
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT---WEDVAP----LK-IA-RM 137 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w~~~~~----~~-~~-~~ 137 (306)
.+++||+.+++.+.+...+..+.....+.. ++.+|+... ....++++|+.+.+ |..-+. .+ .. ..
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 488899888887766554444433333333 456777632 12578899987653 211111 01 11 11
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCC-Cee---EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCC
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRT-NTW---TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATN 213 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~-~~W---~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~ 213 (306)
......-++.||+.-- ..+.+.+||+.. .+. +.+ .....|+ .++...++.||+.....
T Consensus 171 pngis~dg~~lyv~d~--------~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~---gi~vd~dG~l~va~~~~------ 232 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNT--------EKMLLLRIPVDSTDKPGEPEIF-VEQTNID---DFAFDVEGNLYGATHIY------ 232 (306)
T ss_dssp EEEEEEETTEEEEEET--------TTTEEEEEEBCTTSCBCCCEEE-EESCCCS---SEEEBTTCCEEEECBTT------
T ss_pred CCCcCcCCCEEEEEeC--------CCCEEEEEEeCCCCCCCccEEE-eccCCCC---CeEECCCCCEEEEeCCC------
Confidence 1223333568888642 146899999875 222 111 1112222 34445568898875432
Q ss_pred cccccccceeeEEECCCCceEecccCCcccccceeeee-----C-CEEEEEeCc
Q psy9754 214 TQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-----S-SQILIIGGV 261 (306)
Q Consensus 214 ~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-----~-~~i~v~GG~ 261 (306)
..+.++|++ .+...+...+.+.....++.+ + +.||+....
T Consensus 233 -------~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 -------NSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -------CCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -------CeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 567889886 444443333333222233333 2 589887653
No 147
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.02 E-value=0.19 Score=41.61 Aligned_cols=150 Identities=8% Similarity=0.060 Sum_probs=72.2
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC-cccccc--eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCC
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL-KIARMG--MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPR 172 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~-~~~~~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~ 172 (306)
..+..++.|+.+ ..+.+||..+++-...... ...+.. .+++.. +++.++.|+.+ ..+.++|+.
T Consensus 91 s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d--------~~i~iwd~~ 157 (344)
T 4gqb_B 91 VGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD--------ICIKVWDLA 157 (344)
T ss_dssp ETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETT
T ss_pred eCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC--------CeEEEEECC
Confidence 343334455543 4577888877653221111 111111 122222 56666666543 468899998
Q ss_pred CCeeEEcccccCCcceeEEEEEEeC-CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccccc-ceeee
Q psy9754 173 TNTWTTLATKLRYPRYLATLVSVNN-EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHA-HSASV 250 (306)
Q Consensus 173 ~~~W~~~~~~~~~~~~~~~~~~~~~-~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~-~~~~~ 250 (306)
+.+-...... ..... .++....+ ..+++.|+.. ..+.+||+.+.+-...-........ .+++.
T Consensus 158 ~~~~~~~~~~-h~~~V-~~~~~~~~~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 158 QQVVLSSYRA-HAAQV-TCVAASPHKDSVFLSCSED-------------NRILLWDTRCPKPASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp TTEEEEEECC-CSSCE-EEEEECSSCTTEEEEEETT-------------SCEEEEETTSSSCEEECC----CCCEEEEEE
T ss_pred CCcEEEEEcC-cCCce-EEEEecCCCCCceeeeccc-------------cccccccccccceeeeeecceeeccceeeee
Confidence 8764332111 11111 12222222 3566766654 4578899876653322111111111 12222
Q ss_pred e--CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 251 L--SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 251 ~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
. ++++++.|+.+ ..+.+||+++++
T Consensus 223 ~p~~~~~l~sg~~d-------g~v~~wd~~~~~ 248 (344)
T 4gqb_B 223 HPQQSEVFVFGDEN-------GTVSLVDTKSTS 248 (344)
T ss_dssp CSSCTTEEEEEETT-------SEEEEEESCC--
T ss_pred cCCCCcceEEeccC-------CcEEEEECCCCc
Confidence 2 56788888766 467888887654
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.00 E-value=0.42 Score=37.64 Aligned_cols=186 Identities=10% Similarity=-0.112 Sum_probs=94.6
Q ss_pred eeceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCC-CcEEeccCCcc-cccceee
Q psy9754 65 VSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVA-HTWEDVAPLKI-ARMGMAV 141 (306)
Q Consensus 65 ~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~-~~w~~~~~~~~-~~~~~~~ 141 (306)
....++.+|+.+++...+... .....+++.. +++.+++++ ...++++|..+ ++...+..... .......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT--PELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE--SSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred cceeEEEEeCCCCceeeeccC--CcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 357899999998876654332 1122223333 566555554 14788999988 77665543332 1111122
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCccccccc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~ 220 (306)
..-+++.+++++..... ...++.+|..+.....+ ..... ........+++ |++.+.... .
T Consensus 92 ~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~spdg~~l~~~~~~~~-----------~ 152 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLM-TKNLP---SYWHGWSPDGKSFTYCGIRDQ-----------V 152 (297)
T ss_dssp ECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEEC-CSSSS---EEEEEECTTSSEEEEEEEETT-----------E
T ss_pred ECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEe-ecCCC---ccceEECCCCCEEEEEECCCC-----------c
Confidence 22245555554433222 46789999888776666 22221 12223333454 444443221 1
Q ss_pred ceeeEEECCCCceEecccCCcccccceeee-eCCE-EEEEeCccCccccccceEEEeeccccceec
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
..++.++..+.....+...+.. ...++. -+++ |++.+.... ...+|.+++.......
T Consensus 153 ~~l~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~-----~~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 153 FDIYSMDIDSGVETRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG-----QMQIWRVRVDGSSVER 211 (297)
T ss_dssp EEEEEEETTTCCEEECCCSSSC--EEEEEECTTSSEEEEEECTTS-----SCEEEEEETTSSCEEE
T ss_pred eEEEEEECCCCcceEcccCCCc--cccceECCCCCEEEEEecCCC-----CccEEEECCCCCCcEE
Confidence 3567777777766655433221 112222 2555 444443332 1467777766666555
No 149
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.98 E-value=0.76 Score=41.95 Aligned_cols=177 Identities=9% Similarity=0.109 Sum_probs=84.4
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccc-e-eeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMG-M-AVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~-~-~~~~ 143 (306)
..+..+|..+++-...-.-.. ..-.+++.. ++..++.|+.+ ..+.++|.....-..+......+.. . +++.
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHT-KDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEEEE
T ss_pred CcEEEEECCCCcceeEEeCCC-CCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEEEE
Confidence 467888887764322110011 111222222 55666666654 3466677655432222221112211 1 1222
Q ss_pred E-CC--EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccc
Q psy9754 144 I-ND--KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 ~-~~--~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
. ++ .+++.|+.+ +.+.++|+.+.+-....... .. .-.++....++++++.|+..
T Consensus 526 ~~~~~~~~l~s~s~d--------~~v~vwd~~~~~~~~~~~~h-~~-~v~~v~~spdg~~l~sg~~D------------- 582 (694)
T 3dm0_A 526 SPNTLQPTIVSASWD--------KTVKVWNLSNCKLRSTLAGH-TG-YVSTVAVSPDGSLCASGGKD------------- 582 (694)
T ss_dssp CSCSSSCEEEEEETT--------SCEEEEETTTCCEEEEECCC-SS-CEEEEEECTTSSEEEEEETT-------------
T ss_pred eCCCCcceEEEEeCC--------CeEEEEECCCCcEEEEEcCC-CC-CEEEEEEeCCCCEEEEEeCC-------------
Confidence 2 22 345555433 46888998876643321111 11 11233344457777777754
Q ss_pred ceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||+.+.+- +..+.......+++.. ++.+++. +.. ..+.+||+++++-
T Consensus 583 g~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~-~~~-------~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 583 GVVLLWDLAEGKK--LYSLEANSVIHALCFSPNRYWLCA-ATE-------HGIKIWDLESKSI 635 (694)
T ss_dssp SBCEEEETTTTEE--EECCBCSSCEEEEEECSSSSEEEE-EET-------TEEEEEETTTTEE
T ss_pred CeEEEEECCCCce--EEEecCCCcEEEEEEcCCCcEEEE-EcC-------CCEEEEECCCCCC
Confidence 5678899877653 2222222222333333 4444444 333 3588999887654
No 150
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.87 E-value=0.16 Score=43.43 Aligned_cols=149 Identities=11% Similarity=0.128 Sum_probs=78.2
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC-cccccceeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL-KIARMGMAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~-~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++.+.+.|+.+ ..+.+||..+..-...-.+ .+...-.+++. .++.+++.|+.+ ..+.++|.++.
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D--------~~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME--------GTTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS--------SCEEEEETTSC
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC--------CEEEEeeccCC
Confidence 45677777755 3577888877653332222 12111122333 245556666543 45788898887
Q ss_pred eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee--C
Q psy9754 175 TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--S 252 (306)
Q Consensus 175 ~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~ 252 (306)
....+...........++....++.+++.|+.. ..+.+||+.... +..+........++.+ +
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------------g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-------------GNVILLNMDGKE---LWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-------------SBEEEEESSSCB---CCCSBCCSSCEEEEEECTT
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-------------CcEeeeccCcce---eEEEecccceEEeeeecCC
Confidence 765552221122222233344457788887754 457888886543 2222221111222222 3
Q ss_pred -CEEEEEeCccCccccccceEEEeeccccce
Q psy9754 253 -SQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 253 -~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+++.|+.+ ..+.+||+.+.+-
T Consensus 262 ~~~~~~s~s~d-------~~v~iwd~~~~~~ 285 (435)
T 4e54_B 262 CDWFLATASVD-------QTVKIWDLRQVRG 285 (435)
T ss_dssp CSSEEEEEETT-------SBCCEEETTTCCS
T ss_pred CceEEEEecCc-------ceeeEEecccccc
Confidence 4577777766 4577888876543
No 151
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.87 E-value=0.83 Score=40.55 Aligned_cols=144 Identities=13% Similarity=0.151 Sum_probs=75.6
Q ss_pred CEEEEEccC-CCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 99 DKIYAIGGQ-DCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 99 ~~iyv~GG~-~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.++.|+. + ..+.+||..+.+... ..+............ ++++++.|+.+ ..+..||..+..
T Consensus 456 ~~~l~~~~~~d-----~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d--------g~i~iw~~~~~~ 521 (615)
T 1pgu_A 456 QNYVAVGLEEG-----NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM--------GKILLYDLQSRE 521 (615)
T ss_dssp SSEEEEEETTT-----SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTE
T ss_pred CCEEEEeecCC-----CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC--------CeEEEeeCCCCc
Confidence 555556554 3 457888988876543 222211111222222 56666666543 568899998776
Q ss_pred eEEcccccCCcceeEEEEEEe----------CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccccc
Q psy9754 176 WTTLATKLRYPRYLATLVSVN----------NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHA 245 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~~----------~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~ 245 (306)
-... ........-.++.... ++++++.|+.. ..+.+||+.+.. +.+..+......
T Consensus 522 ~~~~-~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-------------g~i~iw~~~~~~-~~~~~~~~h~~~ 586 (615)
T 1pgu_A 522 VKTS-RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-------------TNIFIYSVKRPM-KIIKALNAHKDG 586 (615)
T ss_dssp EEEC-CSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-------------SCEEEEESSCTT-CCEEETTSSTTC
T ss_pred ceeE-eecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-------------CcEEEEECCCCc-eechhhhcCccc
Confidence 4433 1110111112333333 47777777654 568899987752 112222211111
Q ss_pred -ceee-eeCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 246 -HSAS-VLSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 246 -~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+++ .-+++ ++.+|.+ ..+.+|++++
T Consensus 587 v~~l~~s~~~~-l~s~~~d-------~~v~iw~~~~ 614 (615)
T 1pgu_A 587 VNNLLWETPST-LVSSGAD-------ACIKRWNVVL 614 (615)
T ss_dssp EEEEEEEETTE-EEEEETT-------SCEEEEEEC-
T ss_pred eEEEEEcCCCC-eEEecCC-------ceEEEEeeec
Confidence 1222 23788 7777776 4688888765
No 152
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.87 E-value=0.6 Score=38.32 Aligned_cols=106 Identities=9% Similarity=0.121 Sum_probs=58.4
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++.+++.|+.+ ..+..||+.+.+-..+ ..........++....++.+++.|+.. ..+.
T Consensus 138 ~~~~l~s~s~d--------g~i~~wd~~~~~~~~~-~~~~~~~~i~~~~~~pdg~~lasg~~d-------------g~i~ 195 (343)
T 3lrv_A 138 NTEYFIWADNR--------GTIGFQSYEDDSQYIV-HSAKSDVEYSSGVLHKDSLLLALYSPD-------------GILD 195 (343)
T ss_dssp -CCEEEEEETT--------CCEEEEESSSSCEEEE-ECCCSSCCCCEEEECTTSCEEEEECTT-------------SCEE
T ss_pred CCCEEEEEeCC--------CcEEEEECCCCcEEEE-EecCCCCceEEEEECCCCCEEEEEcCC-------------CEEE
Confidence 45566666633 5688999888776443 211112112234444567888887754 5688
Q ss_pred EEECCCCceEecccCCc--ccccceeeee-CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 225 VFVSNEKEWKFVTELVV--PRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~--~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+||+.+.+-.. ..+.. ...-.+++.. ++..++.|+ + +.+.+||+++.+
T Consensus 196 iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 196 VYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVEC-D-------QTVVCFDLRKDV 246 (343)
T ss_dssp EEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEE-S-------SBEEEEETTSST
T ss_pred EEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEe-C-------CeEEEEEcCCCC
Confidence 99998765320 11111 1111122222 666666666 3 368899987764
No 153
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.84 E-value=0.51 Score=38.47 Aligned_cols=188 Identities=10% Similarity=0.025 Sum_probs=92.9
Q ss_pred eEEEEeCCCCCeeeCCCCCCC---ccceeeEE-E-CCEEEEEccCCC------------CCCCceeEEEeCCCCcEEecc
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYP---RKIFSFVS-C-LDKIYAIGGQDC------------KTLLSSVECYDPVAHTWEDVA 130 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~---~~~~~~~~-~-~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~w~~~~ 130 (306)
.+++||+.+++.+.+...... ..-..++. - ++.||+...... ......++++|+.+++.+.+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 478888887655544321111 11122222 3 578998743210 012356899999888765542
Q ss_pred CCcccccceeeEEE-C-CEEEEEcccCCCCCCCCCccEEEEeCCCC---eeEEcccccCCcceeEEEEEEeCCEEEEEcC
Q psy9754 131 PLKIARMGMAVAEI-N-DKIWIAGGYTGDKMNPVTDKVECYDPRTN---TWTTLATKLRYPRYLATLVSVNNEKLYIIGG 205 (306)
Q Consensus 131 ~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG 205 (306)
.- .......+.. + +.||+.-.. .+.+.+|++... +.+.+ ...+. -..++...++.||+...
T Consensus 182 ~~--~~~p~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~~~~~~-~~~~g---P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 182 KE--LHVPGGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKGTAEVL-VKIPN---PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EE--ESCCCEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTTCEEEE-EECSS---EEEEEECTTSCEEEEEE
T ss_pred cC--CccCcceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCCccceE-EeCCC---CCCeEECCCCCEEEEec
Confidence 21 1111223333 3 368887421 367899988752 34433 22221 22344444678988753
Q ss_pred CCCCCCCCcccccccceeeEEECCCCceEecccCCcc---cccceeeeeCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 206 ASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVP---RHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~---~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
....... .......+.+||++...-..+. .|.. ..-.+++..+++||+..... +.+.+|+++.+
T Consensus 248 ~~~~~~~---~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~~-------~~i~~~~~~~~ 314 (322)
T 2fp8_A 248 EELDGNM---HGRVDPKGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLFH-------GSVGILVYDKK 314 (322)
T ss_dssp EETTSST---TSCEEEEEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSSC-------SEEEEEEC---
T ss_pred Ccccccc---cCCCccEEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecCC-------CceEEEecccc
Confidence 3100000 0001245788988644333333 2221 12223334588999876544 57888887643
No 154
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.79 E-value=0.62 Score=37.99 Aligned_cols=93 Identities=13% Similarity=0.161 Sum_probs=46.6
Q ss_pred ceEEEEeCCCCC--eeeCCCCCC--CccceeeE-----EECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccccc
Q psy9754 67 NSVWSFNPNNKQ--WTQEPNMTY--PRKIFSFV-----SCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARM 137 (306)
Q Consensus 67 ~~~~~~d~~t~~--W~~~~~~~~--~~~~~~~~-----~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~ 137 (306)
..+..||+.+++ ...+..... .+...+++ .-++.+++.|+.+ ..+.+||..+.+-.........
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~-- 211 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNIKNG-- 211 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecCCCCc--
Confidence 457788887764 233322221 11222222 1356666666643 4688899988774333222211
Q ss_pred ceeeEEE----CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 138 GMAVAEI----NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 138 ~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
-..++.. ++..++.|+.+ +.+..||..+.
T Consensus 212 v~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~ 244 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVATSLE--------GKFHVFDMRTQ 244 (357)
T ss_dssp EEEEEESCSSSSCCEEEEEEST--------TEEEEEEEEEE
T ss_pred eEEEEcCCCCCCCCEEEEECCC--------CeEEEEeCcCC
Confidence 1222332 45555655432 45777776543
No 155
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.77 E-value=0.59 Score=37.51 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=32.9
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-eeEEEC---CEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-AVAEIN---DKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
+.+++.|+.+ ..+.++|..+++|..+..+....... .++... +.+++.|+.+ +.+..+|..+.
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBCSS
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEecCC
Confidence 5666667654 45777888877765543332111111 222221 4455555533 45677776654
No 156
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.76 E-value=0.62 Score=42.14 Aligned_cols=192 Identities=10% Similarity=-0.025 Sum_probs=98.7
Q ss_pred eceEEEEeCCC------CCeeeCC-CCCCCccceeeEEE-CCEEEEEccCCCCC---CCceeEEEeCC-CCcEEeccCCc
Q psy9754 66 SNSVWSFNPNN------KQWTQEP-NMTYPRKIFSFVSC-LDKIYAIGGQDCKT---LLSSVECYDPV-AHTWEDVAPLK 133 (306)
Q Consensus 66 ~~~~~~~d~~t------~~W~~~~-~~~~~~~~~~~~~~-~~~iyv~GG~~~~~---~~~~~~~~d~~-~~~w~~~~~~~ 133 (306)
..+++.+|..+ ++-+.+. .-. ......+.. +++..++...+... ....++++|.. ++++.+...+.
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 46788999887 5655554 211 112222222 55444433322211 23578999998 56332222222
Q ss_pred cc--ccceeeE-EECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcc----e---eEEEEEEeCCEEEEE
Q psy9754 134 IA--RMGMAVA-EINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPR----Y---LATLVSVNNEKLYII 203 (306)
Q Consensus 134 ~~--~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~----~---~~~~~~~~~~~iyi~ 203 (306)
.. ....... .-++++|+.+...+ ...++.+|+.+.+++.+ ....... . ........++++++.
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l-~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQL-CRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEES-SCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred CCCCceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeec-ccccccccCccccccCceEeEeCCCEEEEE
Confidence 11 1111222 22677777664331 24799999988888887 3221110 0 112333335777776
Q ss_pred cCCCCCCCCCcccccccceeeEEECCCCceEecccCCccccccee-eeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 204 GGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSA-SVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 204 GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+.. . ...++.+|+.+...+.+... .. ..... ..-++.++++.+... ....++.+|+++++.
T Consensus 311 ~~~-~-----------~~~l~~~d~~~~~~~~l~~~-~~-~~~~~~s~~~~~~~~~~~~~~----~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 311 HGK-G-----------AAVLGILDPESGELVDAAGP-WT-EWAATLTVSGTRAVGVAASPR----TAYEVVELDTVTGRA 372 (662)
T ss_dssp EBS-S-----------SCEEEEEETTTTEEEECCSS-CC-EEEEEEEEETTEEEEEEEETT----EEEEEEEEETTTCCE
T ss_pred EEc-C-----------ccEEEEEECCCCcEEEecCC-CC-eEEEEEecCCCEEEEEEcCCC----CCCEEEEEECCCCce
Confidence 643 2 15678889887776665432 11 11122 233556666654432 125788888877766
Q ss_pred ec
Q psy9754 283 IK 284 (306)
Q Consensus 283 ~~ 284 (306)
+.
T Consensus 373 ~~ 374 (662)
T 3azo_A 373 RT 374 (662)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 157
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.71 E-value=1.1 Score=40.10 Aligned_cols=104 Identities=15% Similarity=0.244 Sum_probs=61.5
Q ss_pred ceEEEEeC-CCCC--eeeCCCCCCC--------ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEec-cCC
Q psy9754 67 NSVWSFNP-NNKQ--WTQEPNMTYP--------RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDV-APL 132 (306)
Q Consensus 67 ~~~~~~d~-~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~-~~~ 132 (306)
..++.+|. .+++ |+.-...... ......+..+++||+... ...++.+|..+++ |+.- ...
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~ 146 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLALDAKTGKINWEVEVCDP 146 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCCG
T ss_pred CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCEEEEEECCCCCEEEEecCCCC
Confidence 56899999 7876 8764432211 112345566899998743 2568899998885 8743 221
Q ss_pred ccc-ccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 133 KIA-RMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 133 ~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
... .....-++.++.+|+........ ....++.||+++.+ |+.-
T Consensus 147 ~~~~~~~~~P~v~~g~v~vg~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 147 KVGSTLTQAPFVAKDTVLMGCSGAELG---VRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp GGTCBCCSCCEEETTEEEEECBCGGGT---CCCEEEEEETTTCCEEEEEE
T ss_pred CccceeccCCEEECCEEEEEecCCccC---CCCEEEEEECCCCcEEEEEc
Confidence 111 11122345688888764321111 13679999998765 8654
No 158
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.71 E-value=0.44 Score=39.69 Aligned_cols=145 Identities=9% Similarity=0.050 Sum_probs=77.4
Q ss_pred EEEEEccCCCCCCCceeEEEeCCCCcEEeccCC-cccccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 100 KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL-KIARMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 100 ~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~-~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
.+++.|+.+ ..+.+||..+.+....-.. .....-..++.. ++.+++.++.+ ..+..+|..+...
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSCEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCCce
Confidence 566666654 4578889988776544332 122222233333 34566666433 5688999988776
Q ss_pred EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCE-
Q psy9754 177 TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQ- 254 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~- 254 (306)
..+.........-.++....++..++.|+.. ..+.+||+....-..+..- ...-.+++.. ++.
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h--~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST-------------GRLLLLGLDGHEIFKEKLH--KAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT-------------SEEEEEETTSCEEEEEECS--SSCEEEEEECSSCTT
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC-------------CCEEEEECCCCEEEEeccC--CCcEEEEEECCCCCC
Confidence 6652211111222233344456777776654 5678898854332222211 1111122222 455
Q ss_pred EEEEeCccCccccccceEEEeeccc
Q psy9754 255 ILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 255 i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
+++.|+.+ ..+.+||+.+
T Consensus 219 ~l~s~~~d-------~~i~iwd~~~ 236 (383)
T 3ei3_B 219 LMATSSVD-------ATVKLWDLRN 236 (383)
T ss_dssp EEEEEETT-------SEEEEEEGGG
T ss_pred EEEEEeCC-------CEEEEEeCCC
Confidence 77777766 4688888876
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.71 E-value=0.68 Score=37.84 Aligned_cols=177 Identities=10% Similarity=0.057 Sum_probs=85.6
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEE---ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVS---CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
..+..+|..+++...+.. ......++.. -++.+++.|+.+ ..+.+||..+.+-.. .+...........
T Consensus 108 g~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~~~~~~ 178 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMM--VLQLPERCYCADV 178 (368)
T ss_dssp SEEEEEETTTTEEEEEEE--CSSCEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSE--EEECSSCEEEEEE
T ss_pred CcEEEEEcCCCCceeecc--ccCceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEE--EEecCCCceEEEe
Confidence 467888988877544322 1111222232 256777777754 457888887765221 1111222233344
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCCcceeEEEEEEe---CCEEEEEcCCCCCCCCCccccc
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRYPRYLATLVSVN---NEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~---~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
....+++.+. .+.+..||..... +..+....... .....+... ....++.|+..
T Consensus 179 ~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d----------- 237 (368)
T 3mmy_A 179 IYPMAVVATA---------ERGLIVYQLENQPSEFRRIESPLKHQ-HRCVAIFKDKQNKPTGFALGSIE----------- 237 (368)
T ss_dssp ETTEEEEEEG---------GGCEEEEECSSSCEEEEECCCSCSSC-EEEEEEEECTTSCEEEEEEEETT-----------
T ss_pred cCCeeEEEeC---------CCcEEEEEeccccchhhhccccccCC-CceEEEcccCCCCCCeEEEecCC-----------
Confidence 4565555443 2457777776553 44442211111 111112211 11235555543
Q ss_pred ccceeeEEECCCCce-EecccCCccc-------------ccceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 219 SVSDLDVFVSNEKEW-KFVTELVVPR-------------HAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W-~~~~~~p~~~-------------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
..+.+||.....- ..+..+.... .-.+++.. ++++++.|+.+ ..+.+||.++.+-
T Consensus 238 --g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-------g~i~iwd~~~~~~ 307 (368)
T 3mmy_A 238 --GRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD-------GRFSFWDKDARTK 307 (368)
T ss_dssp --SEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT-------SCEEEEETTTTEE
T ss_pred --CcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC-------CeEEEEECCCCcE
Confidence 4577787765531 1111111111 11122222 67777888776 4688999887654
No 160
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.68 E-value=0.62 Score=37.19 Aligned_cols=160 Identities=7% Similarity=-0.030 Sum_probs=82.8
Q ss_pred ceEEEEeCCCCC--eeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc-EEec-c-CC--cccccc
Q psy9754 67 NSVWSFNPNNKQ--WTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDV-A-PL--KIARMG 138 (306)
Q Consensus 67 ~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~-~-~~--~~~~~~ 138 (306)
+.++.||+ +++ |+.-.+ .....+++..+ ++.+++...... ..++.+|+..+. |+.. . .. +.....
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~~----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGHP----STILEVNMKGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp SEEEEECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEESTT----EEEEEECTTSCEEEEEEECCSCSSGGGSCS
T ss_pred CCEEEECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCCC----CEEEEEeCCCCEEEEEeccCCCCccccccc
Confidence 46888998 564 654331 11122333333 677777644212 567888885553 4422 1 11 111111
Q ss_pred eeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCC-eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccc
Q psy9754 139 MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTN-TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 139 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~ 217 (306)
......++.+++.... ...+.+||++-+ .|+.- .. ..+ ++.....++.+++.+...
T Consensus 129 ~v~~~~~G~~lv~~~~--------~~~v~~~d~~G~~~w~~~-~~-~~~---~~~~~~~~g~~~v~~~~~---------- 185 (276)
T 3no2_A 129 QINKNKKGNYLVPLFA--------TSEVREIAPNGQLLNSVK-LS-GTP---FSSAFLDNGDCLVACGDA---------- 185 (276)
T ss_dssp CCEECTTSCEEEEETT--------TTEEEEECTTSCEEEEEE-CS-SCC---CEEEECTTSCEEEECBTT----------
T ss_pred CceECCCCCEEEEecC--------CCEEEEECCCCCEEEEEE-CC-CCc---cceeEcCCCCEEEEeCCC----------
Confidence 1223345666655321 367999998722 37654 21 112 234445558888876542
Q ss_pred cccceeeEEECCCCc--eEecc-cCCcccc--cceeeee-CCEEEEEe
Q psy9754 218 YSVSDLDVFVSNEKE--WKFVT-ELVVPRH--AHSASVL-SSQILIIG 259 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~--W~~~~-~~p~~~~--~~~~~~~-~~~i~v~G 259 (306)
..+..+|+++.+ |+.-. .++..+. -.+++.+ ++.+|+..
T Consensus 186 ---~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 ---HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ---SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ---CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 458899998554 65432 2222221 2233333 88999987
No 161
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.67 E-value=0.52 Score=46.21 Aligned_cols=178 Identities=8% Similarity=0.019 Sum_probs=81.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE---CCEEEEEccCCCCCCCceeEEEeCCCCcEEec-cCCcccccceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC---LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV-APLKIARMGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~ 142 (306)
..+..+|..+++-...-.... ....+++.. ++.+++.|+.+ ..+.+||..+++.... ....... ..++
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~~h~~~v--~~~~ 750 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEHS-EQVNCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECRNTMFGHTNSV--NHCR 750 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECCS-SCEEEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEEEEECCCSSCE--EEEE
T ss_pred CeEEEEECCCCceEEEEcCCC-CcEEEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchhheecCCCCCE--EEEE
Confidence 468888988876432211111 111222222 23455555543 4577889887764322 1111111 1111
Q ss_pred E-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc---------C--CcceeEEEEEEeCCEEEEEcCCCCCC
Q psy9754 143 E-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL---------R--YPRYLATLVSVNNEKLYIIGGASQTD 210 (306)
Q Consensus 143 ~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~---------~--~~~~~~~~~~~~~~~iyi~GG~~~~~ 210 (306)
. -++.+++.|+.+ +.+..+|..+..-....... + ......+++...++..+++++.
T Consensus 751 ~sp~~~~l~s~s~d--------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---- 818 (1249)
T 3sfz_A 751 FSPDDELLASCSAD--------GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK---- 818 (1249)
T ss_dssp ECSSTTEEEEEESS--------SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET----
T ss_pred EecCCCEEEEEECC--------CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC----
Confidence 2 245555555533 46778887766532210000 0 0001111222234555555542
Q ss_pred CCCcccccccceeeEEECCCCceEecccCCcccccceeee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 211 ATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 211 ~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
..+.+||..+................+++. -++.++++|+.+ ..+.+||.++..
T Consensus 819 ----------~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------g~v~vwd~~~~~ 873 (1249)
T 3sfz_A 819 ----------NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ-------YCVELWNIDSRL 873 (1249)
T ss_dssp ----------TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS-------SCEEEEETTTTE
T ss_pred ----------CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-------CeEEEEEcCCCc
Confidence 457888887766443222111111122222 267777777766 356677766543
No 162
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.67 E-value=1 Score=41.72 Aligned_cols=140 Identities=9% Similarity=0.209 Sum_probs=77.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc--ccccce-eeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK--IARMGM-AVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~--~~~~~~-~~~~ 143 (306)
+.+++||+.+.++...... .......++..++.||+... ..+++||+.+++.+...... .+.... ..+.
T Consensus 82 ~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 153 (758)
T 3ott_A 82 NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIR 153 (758)
T ss_dssp TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEECHHHHCCSCSCEEEEEE
T ss_pred CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEeccCCCCcCCCeEEEEEE
Confidence 4578999999887652111 11112223345788988632 35789999998887663211 111111 1222
Q ss_pred E-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCC--cc-eeEEEEEEeC-CEEEEEcCCCCCCCCCccccc
Q psy9754 144 I-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRY--PR-YLATLVSVNN-EKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 144 ~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~--~~-~~~~~~~~~~-~~iyi~GG~~~~~~~~~~~~~ 218 (306)
- ++.|+|.. .+.+.+||+.+.+++....+... .. .-.+++...+ +.|++-. .
T Consensus 154 d~~g~lWigt----------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt--~----------- 210 (758)
T 3ott_A 154 TKDNQIYVGT----------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT--E----------- 210 (758)
T ss_dssp CTTCCEEEEE----------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE--E-----------
T ss_pred cCCCCEEEEe----------CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE--C-----------
Confidence 2 67888842 13588999999888765211111 11 1122333322 3577632 1
Q ss_pred ccceeeEEECCCCceEecccC
Q psy9754 219 SVSDLDVFVSNEKEWKFVTEL 239 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~ 239 (306)
..+.+||+.+.+++....+
T Consensus 211 --~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 211 --GYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp --EEEEEEETTTTEEEEEEEE
T ss_pred --CCCeEEcCCCCeEEeccCC
Confidence 3478899988887765433
No 163
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.57 E-value=1.2 Score=40.70 Aligned_cols=121 Identities=14% Similarity=0.211 Sum_probs=70.8
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCccc--------ccceeeEEECCEEEEEcccCCCCCCC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIA--------RMGMAVAEINDKIWIAGGYTGDKMNP 161 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~ 161 (306)
.+.+..++.||+... ...++.+|..+++ |+.-...+.. ......++.+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred eCCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 344567999999865 2568899998886 8765433211 112345567899988642
Q ss_pred CCccEEEEeCCCCe--eEEccc-ccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc--eEe
Q psy9754 162 VTDKVECYDPRTNT--WTTLAT-KLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE--WKF 235 (306)
Q Consensus 162 ~~~~~~~~d~~~~~--W~~~~~-~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~~ 235 (306)
...++.+|.++.+ |+.-.. ..... ....+.++.+ +.+|+..+..... .-..++.||..+.+ |+.
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~--------~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYG--------VRGYITAYDAETGERKWRW 206 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTC--------CBCEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEEC-CEEEEEecccccC--------CCCEEEEEECCCCcEEEEe
Confidence 3579999988775 876422 11111 1112233344 7777644321110 12568999998765 764
Q ss_pred c
Q psy9754 236 V 236 (306)
Q Consensus 236 ~ 236 (306)
-
T Consensus 207 ~ 207 (677)
T 1kb0_A 207 F 207 (677)
T ss_dssp E
T ss_pred c
Confidence 3
No 164
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.55 E-value=0.9 Score=38.13 Aligned_cols=151 Identities=14% Similarity=0.079 Sum_probs=78.4
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-----ccCCc-ccccceeeEEE-CC-EEEEEcccCCCCCCCCCccEEEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-----VAPLK-IARMGMAVAEI-ND-KIWIAGGYTGDKMNPVTDKVECY 169 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-----~~~~~-~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~ 169 (306)
++.+++.|+.+ ..+.+||..++.... +..+. ....-..++.. ++ .+++.|+.+ ..+.++
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD--------NVILVW 159 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT--------SCEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC--------CEEEEE
Confidence 56677777654 457888888775321 11111 11111122222 22 466666533 468899
Q ss_pred eCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecc-cCCccccccee
Q psy9754 170 DPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT-ELVVPRHAHSA 248 (306)
Q Consensus 170 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~-~~p~~~~~~~~ 248 (306)
|+.+.+.............-.++....++.+++.++.. ..+.+||+.+.+-...- ..........+
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 226 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKDRPHEGTRPVHA 226 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEECSSCSSSCCEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeeccCCCCCcceEE
Confidence 99888654431101112222233333356777776643 56899999876543221 11111112223
Q ss_pred ee-eCCEEEEEe---CccCccccccceEEEeeccccc
Q psy9754 249 SV-LSSQILIIG---GVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 249 ~~-~~~~i~v~G---G~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+. -+++++++| +.+ ..+.+||+.+.+
T Consensus 227 ~~~~~~~~l~~g~~~~~d-------~~i~iwd~~~~~ 256 (402)
T 2aq5_A 227 VFVSEGKILTTGFSRMSE-------RQVALWDTKHLE 256 (402)
T ss_dssp EECSTTEEEEEEECTTCC-------EEEEEEETTBCS
T ss_pred EEcCCCcEEEEeccCCCC-------ceEEEEcCcccc
Confidence 33 377887777 333 578899987644
No 165
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.48 E-value=1.3 Score=39.55 Aligned_cols=121 Identities=9% Similarity=0.126 Sum_probs=69.5
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeC-CCCc--EEeccCCccc-c-------cceeeEEECCEEEEEcccCCCCCC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDP-VAHT--WEDVAPLKIA-R-------MGMAVAEINDKIWIAGGYTGDKMN 160 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~-~~~~--w~~~~~~~~~-~-------~~~~~~~~~~~iyv~GG~~~~~~~ 160 (306)
.+.+..++.||+.... ...++.+|. .+++ |+.-...... + .....++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred cccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 3445679999998652 246889999 7765 8864332211 1 11234567899988642
Q ss_pred CCCccEEEEeCCCCe--eEEcccccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc--eEe
Q psy9754 161 PVTDKVECYDPRTNT--WTTLATKLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE--WKF 235 (306)
Q Consensus 161 ~~~~~~~~~d~~~~~--W~~~~~~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~~ 235 (306)
...++.+|.++.+ |+.-....+.. ....+.++.+ +.+|+.....+.. .-..++.||.++.+ |+.
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~--------~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-DTVLMGCSGAELG--------VRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEEECBCGGGT--------CCCEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEEC-CEEEEEecCCccC--------CCCEEEEEECCCCcEEEEE
Confidence 2579999988775 87541221111 1112223344 8887754321100 01568899998664 764
No 166
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.45 E-value=0.52 Score=39.56 Aligned_cols=183 Identities=11% Similarity=0.044 Sum_probs=87.4
Q ss_pred eceEEEEeCCCCCee-eCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCC-----cEEeccCCcccccc
Q psy9754 66 SNSVWSFNPNNKQWT-QEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAH-----TWEDVAPLKIARMG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~-~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~-----~w~~~~~~~~~~~~ 138 (306)
...+..||..++.-. .+..+.......+++.. ++++++.|+.+ ..+.+||..+. .-..+.......
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~~h~~~v-- 116 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEANNAINSMARFSNHSSSV-- 116 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECCCSSSCC--
T ss_pred CCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC-----CeEEEeecccccccccchhhccCCccce--
Confidence 356788888775432 22222222222233322 56666666643 45777888761 222222211111
Q ss_pred eeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCe------eEEccccc-CCcceeEEEEEEeC-CEEEEEcCCCC
Q psy9754 139 MAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT------WTTLATKL-RYPRYLATLVSVNN-EKLYIIGGASQ 208 (306)
Q Consensus 139 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~------W~~~~~~~-~~~~~~~~~~~~~~-~~iyi~GG~~~ 208 (306)
..++.. ++.+++.|+.+ ..+..+|..+.. -....... .....-.++....+ +.+++.++..
T Consensus 117 ~~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d- 187 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNN--------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS- 187 (416)
T ss_dssp CEEEECSSSTTBEEEECSS--------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-
T ss_pred EEEEEcCCCCCEEEEEcCC--------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-
Confidence 122222 25666666533 467888887764 11110111 11111123333333 5677777654
Q ss_pred CCCCCcccccccceeeEEECCCCceEecccCCc-----ccccceeeee-CC-EEEEEeCccCccccccceEEEeecccc
Q psy9754 209 TDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-----PRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 209 ~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-----~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
..+.+||+.+.+-...-..+. .....+++.. ++ .+++.++.+.. ...+.+||+++.
T Consensus 188 ------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~~~i~~~d~~~~ 250 (416)
T 2pm9_A 188 ------------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN----DPSILIWDLRNA 250 (416)
T ss_dssp ------------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS----SCCCCEEETTST
T ss_pred ------------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC----CceEEEEeCCCC
Confidence 568899998766443322221 1112222222 33 57777765521 026778888765
No 167
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.44 E-value=0.62 Score=38.23 Aligned_cols=98 Identities=10% Similarity=0.115 Sum_probs=53.2
Q ss_pred ccEEEEeCCCCe-eEEcccccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCC
Q psy9754 164 DKVECYDPRTNT-WTTLATKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELV 240 (306)
Q Consensus 164 ~~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p 240 (306)
..+..||..+.. .... .. .....-.++.... ++.+++.|+.. ..+.+||+.+.+-..+....
T Consensus 104 ~~~~~~~~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~~l~s~s~d-------------g~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 104 NQITILDSKTNKVLREI-EV-DSANEIIYMYGHNEVNTEYFIWADNR-------------GTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp TEEEEEETTTCCEEEEE-EC-CCSSCEEEEECCC---CCEEEEEETT-------------CCEEEEESSSSCEEEEECCC
T ss_pred CceEEeecCCcceeEEe-ec-CCCCCEEEEEcCCCCCCCEEEEEeCC-------------CcEEEEECCCCcEEEEEecC
Confidence 356667777665 2332 11 1111111222223 46677767654 56789999877654332222
Q ss_pred cccccceeeee-CCEEEEEeCccCccccccceEEEeecccccee
Q psy9754 241 VPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWI 283 (306)
Q Consensus 241 ~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~ 283 (306)
......+++.. ++.+++.|+.+ ..+.+||+++.+-.
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~d-------g~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSPD-------GILDVYNLSSPDQA 205 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECTT-------SCEEEEESSCTTSC
T ss_pred CCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCCCC
Confidence 22122233333 77888888877 57889999876643
No 168
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.39 E-value=1.1 Score=38.27 Aligned_cols=108 Identities=10% Similarity=-0.004 Sum_probs=54.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe--ccCCcc-cccceeeE-EEC---CEEEEEcccCCCCCCCCCccEEEEe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED--VAPLKI-ARMGMAVA-EIN---DKIWIAGGYTGDKMNPVTDKVECYD 170 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~--~~~~~~-~~~~~~~~-~~~---~~iyv~GG~~~~~~~~~~~~~~~~d 170 (306)
+++.++.|+.+ ..++.++..+..... +..+.. ...-..++ .-+ +++++.|+.+ ..+.+||
T Consensus 160 ~~~~l~~~~~~-----g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--------~~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADKF-----GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--------EHIKISH 226 (450)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT--------SCEEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC--------CcEEEEE
Confidence 55556666542 457788876655321 111111 11111222 235 6677777643 4678888
Q ss_pred CCCCeeEEc-ccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE
Q psy9754 171 PRTNTWTTL-ATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK 234 (306)
Q Consensus 171 ~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~ 234 (306)
+.+...... ..... ... .+++.. ++.+++.|+.. ..+.+||+.+.+..
T Consensus 227 ~~~~~~~~~~~~~h~-~~v-~~~~~s-d~~~l~s~~~d-------------~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHK-HFV-SSICCG-KDYLLLSAGGD-------------DKIFAWDWKTGKNL 275 (450)
T ss_dssp ESCTTCEEEECCCCS-SCE-EEEEEC-STTEEEEEESS-------------SEEEEEETTTCCEE
T ss_pred CCCCceeeeeecCCC-Cce-EEEEEC-CCCEEEEEeCC-------------CeEEEEECCCCcEe
Confidence 776653322 01111 111 122222 47777777643 56888998877643
No 169
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.38 E-value=1.5 Score=39.44 Aligned_cols=149 Identities=10% Similarity=0.037 Sum_probs=73.7
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcc---cccc--eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKI---ARMG--MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYD 170 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~---~~~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d 170 (306)
++++++.|+.+ ..+.++|..+++... +..... .+.. ..++.. +++.++.|+.+ +.+..+|
T Consensus 201 dg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D--------~~v~lWd 267 (611)
T 1nr0_A 201 DGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD--------KTIKIWN 267 (611)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT--------SEEEEEE
T ss_pred CCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC--------CeEEEEe
Confidence 66777777755 457778887766432 211000 1111 122222 56666666533 5688999
Q ss_pred CCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccc-eee
Q psy9754 171 PRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAH-SAS 249 (306)
Q Consensus 171 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~ 249 (306)
+.+.+.................+... +..++.++.. ..+..+|+....-... +....... +++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d-------------~~i~~~~~~~~~~~~~--~~gh~~~v~~l~ 331 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWT-KQALVSISAN-------------GFINFVNPELGSIDQV--RYGHNKAITALS 331 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEEC-SSCEEEEETT-------------CCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred CCCCceeeeecCCCCccceeEEEEEc-CCEEEEEeCC-------------CcEEEEeCCCCCcceE--EcCCCCCEEEEE
Confidence 98877644311111111111222334 4555555433 4467788766542211 11111111 222
Q ss_pred e-eCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 250 V-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 250 ~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
. -+++.++.++.+ ..+.+||..+++-
T Consensus 332 ~spdg~~l~s~s~D-------~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 332 SSADGKTLFSADAE-------GHINSWDISTGIS 358 (611)
T ss_dssp ECTTSSEEEEEETT-------SCEEEEETTTCCE
T ss_pred EeCCCCEEEEEeCC-------CcEEEEECCCCce
Confidence 2 267777777766 4677888776554
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.38 E-value=0.81 Score=36.54 Aligned_cols=176 Identities=6% Similarity=-0.078 Sum_probs=89.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCC----ccceeeEEECCEEEEE----ccCC--------CCCCCceeEEEeCCCCcEEecc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYP----RKIFSFVSCLDKIYAI----GGQD--------CKTLLSSVECYDPVAHTWEDVA 130 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~----~~~~~~~~~~~~iyv~----GG~~--------~~~~~~~~~~~d~~~~~w~~~~ 130 (306)
..+++||+.+++.+.+...... +....++.-++.+|+. |... .......++.+++. ++.+.+.
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 5689999988887665322111 1112222236789986 3311 01123578999987 5555442
Q ss_pred CCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCC-CCee-E--Ecc-cccCCcceeEEEEEEeCCEEEEEc
Q psy9754 131 PLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPR-TNTW-T--TLA-TKLRYPRYLATLVSVNNEKLYIIG 204 (306)
Q Consensus 131 ~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~-~~~W-~--~~~-~~~~~~~~~~~~~~~~~~~iyi~G 204 (306)
... ......+. -++++++... . .+.+++||+. +.+. . .+. .....++ +++...++.||+..
T Consensus 169 ~~~--~~~~gi~~s~dg~~lv~~~-~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~---~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 169 RDR--VKPNGLAFLPSGNLLVSDT-G-------DNATHRYCLNARGETEYQGVHFTVEPGKTD---GLRVDAGGLIWASA 235 (296)
T ss_dssp CCC--SSEEEEEECTTSCEEEEET-T-------TTEEEEEEECSSSCEEEEEEEECCSSSCCC---SEEEBTTSCEEEEE
T ss_pred cCC--CCCccEEECCCCCEEEEeC-C-------CCeEEEEEECCCCcCcCCCeEeeCCCCCCC---eEEECCCCCEEEEc
Confidence 211 11112222 2455554432 1 3578888876 4444 2 221 0111121 34444568898876
Q ss_pred CCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee--CC-EEEEEeCccCccccccceEEEeeccccc
Q psy9754 205 GASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SS-QILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
. ..+.+||++......+. .+.. -..++.- ++ .||+... ..++.+++++++
T Consensus 236 --~-------------~~v~~~~~~g~~~~~~~-~~~~--~~~~~f~~~d~~~L~v~t~---------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 236 --G-------------DGVHVLTPDGDELGRVL-TPQT--TSNLCFGGPEGRTLYMTVS---------TEFWSIETNVRG 288 (296)
T ss_dssp --T-------------TEEEEECTTSCEEEEEE-CSSC--CCEEEEESTTSCEEEEEET---------TEEEEEECSCCB
T ss_pred --C-------------CeEEEECCCCCEEEEEE-CCCC--ceeEEEECCCCCEEEEEcC---------CeEEEEEccccc
Confidence 1 45789998754433332 2322 2223331 33 5666542 368888888765
Q ss_pred ee
Q psy9754 282 WI 283 (306)
Q Consensus 282 W~ 283 (306)
=+
T Consensus 289 ~~ 290 (296)
T 3e5z_A 289 LE 290 (296)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 171
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.37 E-value=1.6 Score=39.93 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=70.0
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCccc--------ccceeeEEECCEEEEEcccCCCCCCC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIA--------RMGMAVAEINDKIWIAGGYTGDKMNP 161 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~ 161 (306)
.+.+..++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+...
T Consensus 64 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp CCCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred ecCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 344567999999865 2458899998776 8864433211 011234567889888642
Q ss_pred CCccEEEEeCCCCe--eEEccc-ccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc--eEe
Q psy9754 162 VTDKVECYDPRTNT--WTTLAT-KLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE--WKF 235 (306)
Q Consensus 162 ~~~~~~~~d~~~~~--W~~~~~-~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~~ 235 (306)
-..++.+|.++.+ |+.-.. .... .....+.++.+ +.+|+-.+..... .-..++.||.++.+ |+.
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~-g~v~vg~~~~~~~--------~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVN-GKVVIGNGGAEFG--------VRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEET-TEEEECCBCTTTC--------CBCEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEEC-CEEEEEeCCCccC--------CCCEEEEEECCCCcEEEEe
Confidence 2578999988775 876522 1111 11112233444 7887633221111 12568999998776 774
Q ss_pred c
Q psy9754 236 V 236 (306)
Q Consensus 236 ~ 236 (306)
-
T Consensus 200 ~ 200 (689)
T 1yiq_A 200 Y 200 (689)
T ss_dssp E
T ss_pred c
Confidence 3
No 172
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.36 E-value=1.5 Score=40.04 Aligned_cols=148 Identities=11% Similarity=0.087 Sum_probs=74.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++++.+.|+.+ ..+.++|..+++-.. +.. +...-..++. -++..++.|+.+ ..+.++|.....
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D--------~~i~iwd~~~~~ 505 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRD--------RTIKLWNTLGEC 505 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETT--------SCEEEECTTSCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCC--------CEEEEEECCCCc
Confidence 56777777754 457788988775322 111 1111112222 245555555533 457788876554
Q ss_pred eEEcccccCCcceeEEEEEEe-CC--EEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccc-eeeee
Q psy9754 176 WTTLATKLRYPRYLATLVSVN-NE--KLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAH-SASVL 251 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~~-~~--~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~~~ 251 (306)
-..+......-+.....+.+. ++ .+++.|+.. ..+.+||+.+.+-... +....... +++..
T Consensus 506 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-------------~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~s 570 (694)
T 3dm0_A 506 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-------------KTVKVWNLSNCKLRST--LAGHTGYVSTVAVS 570 (694)
T ss_dssp EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-------------SCEEEEETTTCCEEEE--ECCCSSCEEEEEEC
T ss_pred ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-------------CeEEEEECCCCcEEEE--EcCCCCCEEEEEEe
Confidence 333311111111112233332 22 355555543 5678899876653322 11111111 22222
Q ss_pred -CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 -SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 -~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++.+++.|+.+ ..+.+||+.+.+-
T Consensus 571 pdg~~l~sg~~D-------g~i~iwd~~~~~~ 595 (694)
T 3dm0_A 571 PDGSLCASGGKD-------GVVLLWDLAEGKK 595 (694)
T ss_dssp TTSSEEEEEETT-------SBCEEEETTTTEE
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCce
Confidence 77888888877 4688899877654
No 173
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.32 E-value=0.7 Score=38.82 Aligned_cols=146 Identities=14% Similarity=0.139 Sum_probs=73.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+++.++.|+.+ ..+.+||..+.+-...-.. ....-..++.. ++..++.|+.+ ..+..+|+.+.+.
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC--------CcEEEEECCCCee
Confidence 56777777654 4577889887764322110 11111122222 44445555433 5688899888765
Q ss_pred EEcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe-cccCCc---c-cc-cceee
Q psy9754 177 TTLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF-VTELVV---P-RH-AHSAS 249 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~-~~~~p~---~-~~-~~~~~ 249 (306)
... ..... ...+++... ++++++.|+.. ..+.+||+.+..-.. +..... . .. -.+++
T Consensus 200 ~~~-~~~~~--~v~~~~~~~~~~~~l~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 200 SLT-LSIED--GVTTVAVSPGDGKYIAAGSLD-------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EEE-EECSS--CEEEEEECSTTCCEEEEEETT-------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred EEE-EEcCC--CcEEEEEECCCCCEEEEEcCC-------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 433 11111 112223332 47777777654 457888987765332 111100 0 11 11222
Q ss_pred ee-CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 250 VL-SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 250 ~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
.. +++.++.|+.+ ..+.+||+.+.
T Consensus 264 ~~~~g~~l~s~s~d-------~~v~~wd~~~~ 288 (393)
T 1erj_A 264 FTRDGQSVVSGSLD-------RSVKLWNLQNA 288 (393)
T ss_dssp ECTTSSEEEEEETT-------SEEEEEEC---
T ss_pred ECCCCCEEEEEeCC-------CEEEEEECCCC
Confidence 22 67777887766 56888887653
No 174
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.31 E-value=0.77 Score=42.50 Aligned_cols=130 Identities=7% Similarity=0.148 Sum_probs=70.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc-ccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA-RMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++.||+++|.. .-+.+||+.+++++.+..-... .....+... ++.|++.. .+.+.+||+++.
T Consensus 482 ~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt----------~~Gl~~~~~~~~ 546 (758)
T 3ott_A 482 EGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF----------HGGVMRINPKDE 546 (758)
T ss_dssp TSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE----------TTEEEEECC--C
T ss_pred CCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe----------cCceEEEecCCC
Confidence 56888865543 3478899999998876421111 111122222 57888743 235889999988
Q ss_pred eeEEcc-cccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee--
Q psy9754 175 TWTTLA-TKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-- 251 (306)
Q Consensus 175 ~W~~~~-~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-- 251 (306)
+++... ..++.. .-.+++ ..++.|++... ..+.+||+.+.+..... ++..... .++..
T Consensus 547 ~~~~~~~~gl~~~-~i~~i~-~~~g~lWi~t~---------------~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~ 607 (758)
T 3ott_A 547 SQQSISFGSFSNN-EILSMT-CVKNSIWVSTT---------------NGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPK 607 (758)
T ss_dssp CCCBCCCCC---C-CEEEEE-EETTEEEEEES---------------SCEEEEETTTCCEEEC---CCCCCS-EEEEETT
T ss_pred ceEEecccCCCcc-ceEEEE-ECCCCEEEECC---------------CCeEEEcCCCceeEEec-CCCCcee-eeEEECC
Confidence 876652 112211 122333 34689988652 44789999988877543 3332222 23322
Q ss_pred CCEEEEEeCcc
Q psy9754 252 SSQILIIGGVT 262 (306)
Q Consensus 252 ~~~i~v~GG~~ 262 (306)
+|.|| +||..
T Consensus 608 ~G~l~-fG~~~ 617 (758)
T 3ott_A 608 EDCVY-LGGAD 617 (758)
T ss_dssp TTEEE-EECBS
T ss_pred CCcEE-EecCC
Confidence 55555 45444
No 175
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.29 E-value=1.7 Score=39.63 Aligned_cols=152 Identities=11% Similarity=0.045 Sum_probs=75.1
Q ss_pred CceeEEEeCCCCcEEeccCCc-ccccceeeEE-ECCE-EEEEcccCCCCCCCCCccEEEEeCCCC-eeEEcccccCCcc-
Q psy9754 113 LSSVECYDPVAHTWEDVAPLK-IARMGMAVAE-INDK-IWIAGGYTGDKMNPVTDKVECYDPRTN-TWTTLATKLRYPR- 187 (306)
Q Consensus 113 ~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~~~- 187 (306)
...++++|..+++-..+.... ....-..++. -+++ |++.. .+.... ...+..+|+.+. ....+........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~-~~~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE-VNRAQN---ECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE-ECTTSC---EEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE-eCCCCC---eeEEEEEECCCCceeeEEEEccCCCeE
Confidence 366889999988766554321 1111112222 2454 55543 222111 358899999988 6665521111100
Q ss_pred -eeEEEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee--CC-EEEEEeCc
Q psy9754 188 -YLATLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SS-QILIIGGV 261 (306)
Q Consensus 188 -~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~-~i~v~GG~ 261 (306)
....+.... ++++++.+.... ...++.++........+..-... ......+ ++ .||+.+..
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g-----------~~~l~~~~~~~~~~~~l~~~~~~--v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDG-----------WNHLYLYDTTGRLIRQVTKGEWE--VTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTS-----------SCEEEEEETTSCEEEECCCSSSC--EEEEEEECTTSSEEEEEESS
T ss_pred CccCCceeecCCCCEEEEEEccCC-----------ccEEEEEECCCCEEEecCCCCeE--EEeeeEEcCCCCEEEEEecC
Confidence 001223333 577666554321 15678888666666655432111 1111222 44 56665544
Q ss_pred cCccccccceEEEeeccccceec
Q psy9754 262 TTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 262 ~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
.. .....++.+|.++++.+.
T Consensus 377 ~~---~~~~~l~~~d~~~~~~~~ 396 (706)
T 2z3z_A 377 AS---PLERHFYCIDIKGGKTKD 396 (706)
T ss_dssp SC---TTCBEEEEEETTCCCCEE
T ss_pred CC---CceEEEEEEEcCCCCcee
Confidence 32 112478888888777655
No 176
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.27 E-value=0.87 Score=38.78 Aligned_cols=151 Identities=9% Similarity=0.077 Sum_probs=72.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCcccccce-eeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIARMGM-AVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
++.+++.++.+ ..+.+||..+.. ...+..+....... .++.. +..+++.|+.+ +.+.+||..+
T Consensus 243 ~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD--------KTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeCCC
Confidence 45666666543 567888888653 11111111111111 22222 23477777643 5688888876
Q ss_pred Ce--eEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcccccccceeeEEECCCCceE------------eccc
Q psy9754 174 NT--WTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK------------FVTE 238 (306)
Q Consensus 174 ~~--W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~------------~~~~ 238 (306)
.. -..+ ... ...-.++....++ .+++.++.. ..+.+||+....=. .+..
T Consensus 310 ~~~~~~~~-~~h--~~~v~~i~~sp~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 310 LKLKLHSF-ESH--KDEIFQVQWSPHNETILASSGTD-------------RRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp TTSCSEEE-ECC--SSCEEEEEECSSCTTEEEEEETT-------------SCCEEEEGGGTTCCCCHHHHHHCCTTEEEE
T ss_pred CCCCeEEe-ecC--CCCEEEEEECCCCCCEEEEEeCC-------------CcEEEEeCCCCccccCccccccCCcceEEE
Confidence 32 2222 111 1111122222233 567777654 45678887652110 0011
Q ss_pred CCcccccc-eeeee-CCE-EEEEeCccCccccccceEEEeeccccceec
Q psy9754 239 LVVPRHAH-SASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 239 ~p~~~~~~-~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
........ .++.. ++. +++.++.+ +.+.+|++.++.+..
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~d-------g~i~iw~~~~~~~~~ 415 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSED-------NIMQVWQMAENVYND 415 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETT-------SEEEEEEECHHHHCC
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECC-------CCEEEeEcccccccC
Confidence 11111111 12222 555 77777666 578999999888855
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.24 E-value=0.75 Score=38.23 Aligned_cols=196 Identities=10% Similarity=-0.066 Sum_probs=92.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCC-CCCCceeEEEeCCCCcEEeccCCccc-ccceeeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDC-KTLLSSVECYDPVAHTWEDVAPLKIA-RMGMAVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~~~~~~ 143 (306)
..++.+|+.+++-..+...+. ...+....- +++.+++..... ......++.+|..+...+.+...... ...+....
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 678999999887655532111 112222222 344333322221 12346789999888776666543211 11111222
Q ss_pred ECC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcc------eeEEEEEEeCCEEEEEcC----CCCCCCC
Q psy9754 144 IND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPR------YLATLVSVNNEKLYIIGG----ASQTDAT 212 (306)
Q Consensus 144 ~~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~------~~~~~~~~~~~~iyi~GG----~~~~~~~ 212 (306)
-++ .|++........ ...++.+|+++.+-+.+ ...+... .... ..-....|++... ....
T Consensus 247 pdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~--- 317 (388)
T 3pe7_A 247 PDGSALVYVSYLKGSP----DRFIYSADPETLENRQL-TSMPACSHLMSNYDGSL-MVGDGSDAPVDVQDDSGYKIE--- 317 (388)
T ss_dssp TTSSCEEEEEEETTCC----CEEEEEECTTTCCEEEE-EEECCEEEEEECTTSSE-EEEEECCC------------C---
T ss_pred CCCCEEEEEecCCCCC----cceEEEEecCCCceEEE-EcCCCceeeeecCCCCe-EccCCCcceeEeeeccccccC---
Confidence 244 454443322111 13599999998876665 2222100 0001 1112123333210 0000
Q ss_pred CcccccccceeeEEECCCCceEecccCCccc---------ccceeee-eCCE-EEEEeCccCccccccceEEEeeccccc
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTELVVPR---------HAHSASV-LSSQ-ILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~---------~~~~~~~-~~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
....++++|+++.+-+.+...+... .....+. -+++ |++...... ...+|++++....
T Consensus 318 ------~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g-----~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 318 ------NDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG-----KPALYLATLPESV 386 (388)
T ss_dssp ------CCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS-----SCEEEEEECCGGG
T ss_pred ------CCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC-----ceeEEEEECChhc
Confidence 0157899999888766555332210 1122222 2564 555543332 2579999998887
Q ss_pred ee
Q psy9754 282 WI 283 (306)
Q Consensus 282 W~ 283 (306)
|+
T Consensus 387 ~~ 388 (388)
T 3pe7_A 387 WK 388 (388)
T ss_dssp GC
T ss_pred cC
Confidence 73
No 178
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.23 E-value=1.1 Score=37.32 Aligned_cols=179 Identities=13% Similarity=0.089 Sum_probs=88.9
Q ss_pred ceEEEEeCCCCCeeeCC--CCCCCccc--eeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccccc
Q psy9754 67 NSVWSFNPNNKQWTQEP--NMTYPRKI--FSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIARMG 138 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~--~~~~~~~~--~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~~~ 138 (306)
..+..+|..+++-...- ..+..... .++.. .++.+++.|+.+ ..+.+||..... ...+...... -
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h~~~--v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRAVRTYHGHEGD--I 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCCCEEECCCSSC--C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcceEEECCcCCC--e
Confidence 35677888776643321 11221111 11221 156777887765 346778875321 1111111111 1
Q ss_pred eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCc----c-eeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 139 MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYP----R-YLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 139 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~----~-~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
..++.. ++..++.|+.+ ..+..+|+.+..-.......+.. . .-.+++...++++++.|+.+
T Consensus 253 ~~v~~~p~~~~l~s~s~D--------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----- 319 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDD--------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----- 319 (380)
T ss_dssp CEEEECTTSSEEEEECSS--------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----
T ss_pred EEEEEecCCCeEEEEcCC--------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----
Confidence 122222 45666666543 46888998887643321111100 0 11233333457777777654
Q ss_pred CcccccccceeeEEECCCCceE-ecccCCccc-ccceeee--eCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWK-FVTELVVPR-HAHSASV--LSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~-~~~~~p~~~-~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
..+.+||....+-. .+..+.... ....+.. .++..++.|+.+ ..+.+|++...
T Consensus 320 --------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-------~~i~iW~~~~~ 376 (380)
T 3iz6_a 320 --------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD-------KNLKIWAFSGH 376 (380)
T ss_dssp --------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT-------SCEEEEECCSS
T ss_pred --------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC-------CCEEEEecCCC
Confidence 56789998766533 222222111 1112222 378888888887 56888887654
No 179
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=95.21 E-value=0.59 Score=35.28 Aligned_cols=145 Identities=10% Similarity=0.026 Sum_probs=74.8
Q ss_pred eEEECCEEEEEccCCCCCCCceeEEEeCCC---CcEEecc----CCcccccceeeEEECCEEEEEcccCCCCCCCCCccE
Q psy9754 94 FVSCLDKIYAIGGQDCKTLLSSVECYDPVA---HTWEDVA----PLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKV 166 (306)
Q Consensus 94 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~---~~w~~~~----~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 166 (306)
++..++++|+|-| ..+|+++... +-=..+. .+|. ...++....++++|+|-| +..
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg----------~~y 72 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG----------DKH 72 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET----------TEE
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC----------CEE
Confidence 4456899999977 5577775331 1011121 2333 222332234788999876 456
Q ss_pred EEEeCCCCee---EEcc---cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE-----
Q psy9754 167 ECYDPRTNTW---TTLA---TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK----- 234 (306)
Q Consensus 167 ~~~d~~~~~W---~~~~---~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~----- 234 (306)
++|+..+... ..+. +.+|..... +++.. .++++|++-| ...++||..+++-.
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG---------------~~yw~yd~~~~~v~~gyPk 136 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG---------------NKYYRFNEELRAVDSEYPK 136 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET---------------TEEEEEETTTTEECTTCSE
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC---------------CEEEEEeCCcccccCCCCc
Confidence 7777432110 1121 112222233 33333 3589999977 34688887654322
Q ss_pred ecccCC-cccccceeeee-CC-EEEEEeCccCccccccceEEEeeccccc
Q psy9754 235 FVTELV-VPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 235 ~~~~~p-~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+...+ .+..-.++... ++ .+|++-| +..|.||..+.+
T Consensus 137 ~i~~~~gip~~idaAf~~~~~~~~YfFkg---------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 137 NIKVWEGIPESPRGSFMGSDEVFTYFYKG---------NKYWKFNNQKLK 177 (196)
T ss_dssp EGGGSBTCCSSCSEEEECTTSSEEEEEET---------TEEEEEETTTTE
T ss_pred cHHHCCCcCCCcceeEEecCCCEEEEEEC---------CEEEEEECCcce
Confidence 111111 11112223233 44 8999977 457888887755
No 180
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.21 E-value=0.33 Score=39.56 Aligned_cols=117 Identities=11% Similarity=0.049 Sum_probs=60.0
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcccccccce
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
.++++|+.++.. +.+.++|+.+.+.... -..+.......++...++ .+|+.+... ..
T Consensus 9 ~~~~~~v~~~~~--------~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~~~v~~~~~-------------~~ 66 (349)
T 1jmx_B 9 AGHEYMIVTNYP--------NNLHVVDVASDTVYKS-CVMPDKFGPGTAMMAPDNRTAYVLNNHY-------------GD 66 (349)
T ss_dssp TTCEEEEEEETT--------TEEEEEETTTTEEEEE-EECSSCCSSCEEEECTTSSEEEEEETTT-------------TE
T ss_pred CCCEEEEEeCCC--------CeEEEEECCCCcEEEE-EecCCCCCCceeEECCCCCEEEEEeCCC-------------Cc
Confidence 357788876532 6789999998875433 122210011233344444 577765332 56
Q ss_pred eeEEECCCCceEecccCCc-----ccccceeeee-CCEEEEEeCcc-----CccccccceEEEeeccccce
Q psy9754 223 LDVFVSNEKEWKFVTELVV-----PRHAHSASVL-SSQILIIGGVT-----TVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~-----~~~~~~~~~~-~~~i~v~GG~~-----~~~~~~~~~~~~yd~~~~~W 282 (306)
+++||+.+.+-...-..+. ...-..++.- +++.++++... ..+......+++||+++++-
T Consensus 67 i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 8999998776543222221 1112233333 55444444322 00000125799999987543
No 181
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.08 E-value=2 Score=39.24 Aligned_cols=120 Identities=18% Similarity=0.266 Sum_probs=69.6
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccc--------cceeeEEECCEEEEEcccCCCCCCC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIAR--------MGMAVAEINDKIWIAGGYTGDKMNP 161 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~--------~~~~~~~~~~~iyv~GG~~~~~~~~ 161 (306)
.+.+..++.||+... ...++.+|..+++ |+.-...+... ...+.++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp CCCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred cCCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 344567999999865 2568899998776 88644332111 11234567889888642
Q ss_pred CCccEEEEeCCCCe--eEEcccccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc--eEe
Q psy9754 162 VTDKVECYDPRTNT--WTTLATKLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE--WKF 235 (306)
Q Consensus 162 ~~~~~~~~d~~~~~--W~~~~~~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~--W~~ 235 (306)
...++.+|.++.+ |+.-....... ....+.++.+ +.+|+..+..... ....++.||.++.+ |+.
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~--------~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYG--------VRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEET-TEEEECCBCTTTC--------CBCEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEEC-CEEEEeCCCCCcC--------CCCEEEEEECCCCcEEEEe
Confidence 3579999988775 87652221111 1112233344 7777643221111 12568999998765 774
No 182
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.05 E-value=0.23 Score=48.63 Aligned_cols=176 Identities=8% Similarity=0.027 Sum_probs=89.6
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE-C
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI-N 145 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~ 145 (306)
..+..||..+++..................-+++.++.|+.+ ..+.+||..+++.......... -..+... +
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~--v~~~~~~~~ 1055 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFLQAHQET--VKDFRLLQD 1055 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECCBCCSSC--EEEEEECSS
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEEecCCCc--EEEEEEcCC
Confidence 356677777665332211111111111222256666666644 4578899988876644322211 1122222 4
Q ss_pred CEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeE
Q psy9754 146 DKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDV 225 (306)
Q Consensus 146 ~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~ 225 (306)
+++ +.++.+ +.+..+|..+.+-....... .... .+++...+++.++.|+.. ..+.+
T Consensus 1056 ~~l-~~~~~d--------g~v~vwd~~~~~~~~~~~~~-~~~v-~~~~~s~d~~~l~s~s~d-------------~~v~i 1111 (1249)
T 3sfz_A 1056 SRL-LSWSFD--------GTVKVWNVITGRIERDFTCH-QGTV-LSCAISSDATKFSSTSAD-------------KTAKI 1111 (1249)
T ss_dssp SEE-EEEESS--------SEEEEEETTTTCCCEEEECC-SSCC-CCEEECSSSSSCEEECCS-------------SCCCE
T ss_pred CcE-EEEECC--------CcEEEEECCCCceeEEEccc-CCcE-EEEEECCCCCEEEEEcCC-------------CcEEE
Confidence 444 444432 56888998877643220111 1111 123333456777777654 45678
Q ss_pred EECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 226 FVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 226 y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
||..+.+ .+..+........++.+ ++++++.|+.+ ..+.+||..+++-
T Consensus 1112 wd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~d-------g~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1112 WSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDN-------GEIRIWNVSDGQL 1161 (1249)
T ss_dssp ECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETT-------SCCCEEESSSSCC
T ss_pred EECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCC-------CEEEEEECCCCce
Confidence 8876544 22222222111222222 78888888776 4578899887664
No 183
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=95.03 E-value=1.3 Score=37.09 Aligned_cols=128 Identities=12% Similarity=0.224 Sum_probs=72.0
Q ss_pred CCCCee--eCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEE--E----eCCCCcEE-eccC-CcccccceeeEEE
Q psy9754 75 NNKQWT--QEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVEC--Y----DPVAHTWE-DVAP-LKIARMGMAVAEI 144 (306)
Q Consensus 75 ~t~~W~--~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~--~----d~~~~~w~-~~~~-~~~~~~~~~~~~~ 144 (306)
..+.|+ .++..|..-..|+.+.+++.-|.+|=...+.....+-. | +.....-+ +++. ....-...++-.+
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyY 347 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYY 347 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhh
Confidence 345564 35556655667888889888888875444422233222 2 22222222 3332 2223344566678
Q ss_pred CCEEEEEc-ccCCCCCCCCCccEEEEeCCCCeeEEcccccCCc-ceeEEEEEEeCCEEEEEcCCC
Q psy9754 145 NDKIWIAG-GYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYP-RYLATLVSVNNEKLYIIGGAS 207 (306)
Q Consensus 145 ~~~iyv~G-G~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~iyi~GG~~ 207 (306)
++.+|++- |.....- -+.+.+-+..-.+|+.+ ..+... ....-.+..+ +.||+||...
T Consensus 348 dgvLyLtTRgt~~~~~---GS~L~rs~d~Gq~w~sl-rfp~nvHhtnlPFakvg-D~l~mFgsER 407 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRL---GSSLHRSRDIGQTWESL-RFPHNVHHTTLPFAKVG-DDLIMFGSER 407 (670)
T ss_dssp TTEEEEEEEESCTTSC---CCEEEEESSTTSSCEEE-ECTTCCCSSCCCEEEET-TEEEEEEECS
T ss_pred CCEEEEEecCcCCCCC---cceeeeecccCCchhhe-eccccccccCCCcceeC-CEEEEEeccc
Confidence 99999885 4443332 35677777778889998 322111 1112234555 8999998643
No 184
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.02 E-value=1 Score=38.84 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=32.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w 126 (306)
+.+|+||..+++.....-...+. .-++....+++|+|-| +..++||..+++-
T Consensus 167 ~~yw~yd~~~~~~~~~~w~gi~~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v 218 (460)
T 1qhu_A 167 NRKWFWDLTTGTKKERSWPAVGN-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEV 218 (460)
T ss_dssp TEEEEEETTTTEEEEECCTTSCC-CSEEEEETTEEEEEET-------TEEEEECTTTCCC
T ss_pred ccEEEEecccceeecccCCCCCc-cchheeeCCceEEEEC-------CEEEEEcCccCcc
Confidence 45789998876544321111222 2344455799999988 6688898876653
No 185
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.99 E-value=1.5 Score=37.32 Aligned_cols=182 Identities=11% Similarity=0.008 Sum_probs=92.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCc--ccccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLK--IARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~--~~~~~~~~ 141 (306)
..+.++|+.+++-..+.... .. .+ ++.. ++.||+...... ..++++++.++. ...+.... ....-+.+
T Consensus 152 ~~I~~id~~~g~~~~~~~~~-~~-~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~i 224 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF-KG-GK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTRIGQLGSTFSGKIGAV 224 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC-CB-CB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEEEEECCTTSCSCCCBC
T ss_pred CcEEEEECCCCEEEEeeccC-CC-Cc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEEeeeccchhcCCcEEE
Confidence 45777777766554432211 11 12 2222 346777754222 278888887654 23331111 11122233
Q ss_pred EEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc--ccCCccee--EEEEEEe-CCEEEEEcCCCCCCCCCc
Q psy9754 142 AEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT--KLRYPRYL--ATLVSVN-NEKLYIIGGASQTDATNT 214 (306)
Q Consensus 142 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~~~~~--~~~~~~~-~~~iyi~GG~~~~~~~~~ 214 (306)
++. ++.||+... ...++++|+++...+.+.. ........ ..++... ++.||+.....
T Consensus 225 av~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~------- 288 (409)
T 3hrp_A 225 ALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL------- 288 (409)
T ss_dssp EECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT-------
T ss_pred EEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC-------
Confidence 333 689999431 2579999998776544311 11111111 1444444 48999986432
Q ss_pred ccccccceeeEEECCCCceEecccC-Cc---------c-cc-cceeeee-CCEEEEEeC-ccCccccccceEEEeecccc
Q psy9754 215 QKMYSVSDLDVFVSNEKEWKFVTEL-VV---------P-RH-AHSASVL-SSQILIIGG-VTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~~W~~~~~~-p~---------~-~~-~~~~~~~-~~~i~v~GG-~~~~~~~~~~~~~~yd~~~~ 280 (306)
..+++++++...-...... .. . .. -.+++.- ++.||+... .+ ..+.++++.++
T Consensus 289 ------~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-------~~I~~~~~~~G 355 (409)
T 3hrp_A 289 ------SSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-------YCLRKLDILDG 355 (409)
T ss_dssp ------TEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-------CEEEEEETTTT
T ss_pred ------CEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-------CEEEEEECCCC
Confidence 5688888765422221111 00 0 01 1223332 678999865 44 57888886555
Q ss_pred ceec
Q psy9754 281 AWIK 284 (306)
Q Consensus 281 ~W~~ 284 (306)
.-+.
T Consensus 356 ~v~~ 359 (409)
T 3hrp_A 356 YVST 359 (409)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 186
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.99 E-value=0.12 Score=43.33 Aligned_cols=145 Identities=13% Similarity=0.138 Sum_probs=72.7
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC----------Ccccccc--eeeEEE--CCEEEEEcccCCCCCCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP----------LKIARMG--MAVAEI--NDKIWIAGGYTGDKMNPVT 163 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~----------~~~~~~~--~~~~~~--~~~iyv~GG~~~~~~~~~~ 163 (306)
++.+++.|+.+ ..+.+||..+........ .+..+.. ..++.. ++.+++.++.+
T Consensus 55 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-------- 121 (408)
T 4a11_B 55 EGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-------- 121 (408)
T ss_dssp TCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT--------
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC--------
Confidence 46677777654 347778887665322111 0011111 122222 44456665533
Q ss_pred ccEEEEeCCCCeeEEcccccCCcceeEEEEEEe---CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCC
Q psy9754 164 DKVECYDPRTNTWTTLATKLRYPRYLATLVSVN---NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELV 240 (306)
Q Consensus 164 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p 240 (306)
+.+..+|+.+..-... ...+.... ...... ++.+++.|+.. ..+.+||+.+.+-.. .+.
T Consensus 122 ~~i~iwd~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~--~~~ 183 (408)
T 4a11_B 122 KTLKVWDTNTLQTADV-FNFEETVY--SHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSH--ILQ 183 (408)
T ss_dssp SEEEEEETTTTEEEEE-EECSSCEE--EEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCE--EEC
T ss_pred CeEEEeeCCCCcccee-ccCCCcee--eeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceee--eec
Confidence 5688999888775544 22222222 222222 24466666553 467888887654221 111
Q ss_pred ccccc-ceeeee-CCE-EEEEeCccCccccccceEEEeecccc
Q psy9754 241 VPRHA-HSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 241 ~~~~~-~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
..... .+++.. ++. +++.|+.+ ..+.+||+.+.
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~d-------g~i~i~d~~~~ 219 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASAD-------SRVKLWDVRRA 219 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTCS
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCC-------CcEEEEECCCC
Confidence 11111 122222 443 77788766 46888888654
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.98 E-value=1.5 Score=39.08 Aligned_cols=181 Identities=10% Similarity=0.058 Sum_probs=94.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE-C-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-L-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
.+.+..+|..+++-.. .++....-|.++.. + ..+|+.+. ...+.++|+...+-+.+..++....-..+++
T Consensus 176 ~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~ 247 (567)
T 1qks_A 176 AGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKIGSEARSIET 247 (567)
T ss_dssp TTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCCEEEEEECCSEEEEEEE
T ss_pred CCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEeEEEecCCCCceeEE
Confidence 4689999998876432 22333333444444 3 46777642 2468999995222222333332222223333
Q ss_pred E-----CC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEE-cc-ccc--------CCcceeEEEEEEeCCEEEEEcCCC
Q psy9754 144 I-----ND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTT-LA-TKL--------RYPRYLATLVSVNNEKLYIIGGAS 207 (306)
Q Consensus 144 ~-----~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~~-~~~--------~~~~~~~~~~~~~~~~iyi~GG~~ 207 (306)
. ++ .+|+..-. .+.+.++|..+.+-.. ++ ..+ +.+|.. +++..+++..+++.-..
T Consensus 248 s~~~~pDGk~l~v~n~~--------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva-~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYW--------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVA-AILASHYRPEFIVNVKE 318 (567)
T ss_dssp CCSTTCTTTEEEEEEEE--------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEE-EEEECSSSSEEEEEETT
T ss_pred ccccCCCCCEEEEEEcc--------CCeEEEEECCCCcEEEEEeccccccccccccCCCceE-EEEEcCCCCEEEEEecC
Confidence 3 44 66665321 3678889987765322 21 111 123332 22223323444442211
Q ss_pred CCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeeccccce
Q psy9754 208 QTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
...+.+.|........+..++..+..|....- +++ +|+..... +++.++|.++++=
T Consensus 319 ------------~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~s-------n~V~ViD~~t~kl 376 (567)
T 1qks_A 319 ------------TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANAR-------NKLVVIDTKEGKL 376 (567)
T ss_dssp ------------TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGG-------TEEEEEETTTTEE
T ss_pred ------------CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCC-------CeEEEEECCCCcE
Confidence 25678888877665555555556666655544 554 44443322 6788999988763
No 188
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.98 E-value=2.1 Score=39.09 Aligned_cols=105 Identities=17% Similarity=0.218 Sum_probs=63.2
Q ss_pred eceEEEEeCCCCC--eeeCCCCCCC--------ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccC--
Q psy9754 66 SNSVWSFNPNNKQ--WTQEPNMTYP--------RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAP-- 131 (306)
Q Consensus 66 ~~~~~~~d~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~-- 131 (306)
...++.+|..+++ |+.-...+.. ......+..+++||+... ...++.+|..+++ |+.-..
T Consensus 86 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~ 159 (677)
T 1kb0_A 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRLIALDAATGKEVWHQNTFEG 159 (677)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEETTTT
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEEEEEECCCCCEEeeecCCcC
Confidence 3578999998876 8765443211 122345556889988743 2568899998876 775422
Q ss_pred Ccc-cccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 132 LKI-ARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 132 ~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
... ......-++.++.+|+..+..... ....+..||.++.+ |+.-
T Consensus 160 ~~~~~~~~~~p~v~~~~v~v~~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 160 QKGSLTITGAPRVFKGKVIIGNGGAEYG---VRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp CCSSCBCCSCCEEETTEEEECCBCTTTC---CBCEEEEEETTTCCEEEEEE
T ss_pred cCcCcccccCcEEECCEEEEEecccccC---CCCEEEEEECCCCcEEEEec
Confidence 111 112223345688888754322211 14689999998776 8654
No 189
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.86 E-value=0.89 Score=36.67 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=71.1
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCc-cceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc----cccc
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPR-KIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI----ARMG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~-~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~----~~~~ 138 (306)
...+..+|+.+++-...-.++... .-..++.. ++ .+|+.+... ..+.++|+.+++-...-+.+. ...-
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 467889999887643322222210 11223332 44 677776432 568899998877543211111 0011
Q ss_pred eeeEEE-C-CEEEEEcccC---CCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCC
Q psy9754 139 MAVAEI-N-DKIWIAGGYT---GDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGASQTDAT 212 (306)
Q Consensus 139 ~~~~~~-~-~~iyv~GG~~---~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~ 212 (306)
..++.. + +.+|+..... ........+.+.++|+.+.+..........+ ..++...+++ ||+.+
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~~~~-------- 153 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI---TMLAWARDGSKLYGLG-------- 153 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC---CCEEECTTSSCEEEES--------
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc---ceeEECCCCCEEEEeC--------
Confidence 122222 3 4777764211 0000000368999999887754331211111 1233333444 66551
Q ss_pred CcccccccceeeEEECCCCceE
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWK 234 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~ 234 (306)
..+.++|+.+.+-.
T Consensus 154 --------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 --------RDLHVMDPEAGTLV 167 (337)
T ss_dssp --------SSEEEEETTTTEEE
T ss_pred --------CeEEEEECCCCcEe
Confidence 34788888876644
No 190
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.84 E-value=1.3 Score=36.10 Aligned_cols=133 Identities=9% Similarity=-0.012 Sum_probs=70.8
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeE-EECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc----cccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFV-SCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI----ARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~----~~~~~~~ 141 (306)
..+++||+.+++...... + ..-.+++ .-++++|+... ..++++|+.+++.+.+...+. .+.....
T Consensus 71 ~~i~~~d~~~~~~~~~~~-~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~ 140 (326)
T 2ghs_A 71 RELHELHLASGRKTVHAL-P--FMGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELESDLPGNRSNDGR 140 (326)
T ss_dssp TEEEEEETTTTEEEEEEC-S--SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEE
T ss_pred CEEEEEECCCCcEEEEEC-C--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEE
Confidence 578999998876554321 2 1122222 34788888642 348999999998877654322 1111122
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCccccccc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
+.-++++|+....... ......++++| +.+...+...... ..+.+...++ .+|+.....
T Consensus 141 ~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~~~~~~~~~~~---~~~i~~s~dg~~lyv~~~~~------------- 200 (326)
T 2ghs_A 141 MHPSGALWIGTMGRKA--ETGAGSIYHVA--KGKVTKLFADISI---PNSICFSPDGTTGYFVDTKV------------- 200 (326)
T ss_dssp ECTTSCEEEEEEETTC--CTTCEEEEEEE--TTEEEEEEEEESS---EEEEEECTTSCEEEEEETTT-------------
T ss_pred ECCCCCEEEEeCCCcC--CCCceEEEEEe--CCcEEEeeCCCcc---cCCeEEcCCCCEEEEEECCC-------------
Confidence 2235778774321111 11146789998 4665554211111 1233333344 577764321
Q ss_pred ceeeEEECC
Q psy9754 221 SDLDVFVSN 229 (306)
Q Consensus 221 ~~~~~y~~~ 229 (306)
..+++|+.+
T Consensus 201 ~~I~~~d~~ 209 (326)
T 2ghs_A 201 NRLMRVPLD 209 (326)
T ss_dssp CEEEEEEBC
T ss_pred CEEEEEEcc
Confidence 567888875
No 191
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.80 E-value=1.2 Score=35.52 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=48.2
Q ss_pred ccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccc
Q psy9754 164 DKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPR 243 (306)
Q Consensus 164 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~ 243 (306)
..+..+|..+..-... ...... ..........+.+++.+|... ..+.+||..+.+ .+..+....
T Consensus 221 ~~i~lwd~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~sg~~d------------~~i~iwd~~~~~--~~~~l~gH~ 284 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSA-VDAHSQ-VCSILWSPHYKELISGHGFAQ------------NQLVIWKYPTMA--KVAELKGHT 284 (318)
T ss_dssp CEEEEEETTTCCEEEE-EECSSC-EEEEEEETTTTEEEEEECTTT------------CCEEEEETTTCC--EEEEECCCS
T ss_pred CEEEEEeccccccccc-ccceee-eeeeeecccccceEEEEEcCC------------CEEEEEECCCCc--EEEEEcCCC
Confidence 4677888777665443 221122 111222223355655555432 457889987654 233332211
Q ss_pred ccce-eeee-CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 244 HAHS-ASVL-SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 244 ~~~~-~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.... ++.. ++++++.||.+ ..+.+||+.+
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D-------~~v~iWd~~~ 315 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAAD-------ETLRLWRCFE 315 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETT-------TEEEEECCSC
T ss_pred CCEEEEEEcCCCCEEEEEecC-------CeEEEEECCC
Confidence 1112 2222 77888888877 5688887753
No 192
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.79 E-value=0.47 Score=38.51 Aligned_cols=112 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc-cccceeeEEE---CCEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI-ARMGMAVAEI---NDKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~-~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
+++.++.|+.+ ..+.+||..+++...+..+.. ...-..++.. ++.+++.|+.+ ..+..+|+.+
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD--------RKVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT--------SCEEEECCSS
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC--------CEEEEEECCC
Confidence 45666666654 456677777665433322221 1111122221 24556666543 4678889888
Q ss_pred CeeEEcccccCC-cceeEEEEEEeC--CEEEEEcCCCCCCCCCcccccccceeeEEECCCC-ceEec
Q psy9754 174 NTWTTLATKLRY-PRYLATLVSVNN--EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK-EWKFV 236 (306)
Q Consensus 174 ~~W~~~~~~~~~-~~~~~~~~~~~~--~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~-~W~~~ 236 (306)
..|..+ ..+.. ...-.++....+ +.+++.|+.. ..+.+||.... .|...
T Consensus 91 ~~~~~~-~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-------------~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 91 GTWEKS-HEHAGHDSSVNSVCWAPHDYGLILACGSSD-------------GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp SCCCEE-EEECCCSSCCCEEEECCTTTCSCEEEECSS-------------SCEEEEEECSSSCEEEC
T ss_pred CcceEE-EEccCCCCceEEEEECCCCCCcEEEEEcCC-------------CCEEEEecCCCCCccee
Confidence 766544 21111 111112223232 5566776654 45677777654 46543
No 193
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.78 E-value=1.9 Score=38.87 Aligned_cols=198 Identities=6% Similarity=-0.087 Sum_probs=99.9
Q ss_pred ceEEEEeCC--C-CCeeeCCCCCC---CccceeeEEE-CCEEEEEccCCC-----CCCCceeEEEeCCC------CcEEe
Q psy9754 67 NSVWSFNPN--N-KQWTQEPNMTY---PRKIFSFVSC-LDKIYAIGGQDC-----KTLLSSVECYDPVA------HTWED 128 (306)
Q Consensus 67 ~~~~~~d~~--t-~~W~~~~~~~~---~~~~~~~~~~-~~~iyv~GG~~~-----~~~~~~~~~~d~~~------~~w~~ 128 (306)
..+|.++.. . +.-..+...+. .......+.. +++.+++...+. ......++++|..+ ++.+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 468888876 3 55566655431 1112223333 554333333221 02236788999988 66555
Q ss_pred cc-CCcccccceeeEEECC-EEEEEcccCCCCCCCCCccEEEEeCC-CC---eeEEcccccCCcceeEEEEEEeCCEEEE
Q psy9754 129 VA-PLKIARMGMAVAEIND-KIWIAGGYTGDKMNPVTDKVECYDPR-TN---TWTTLATKLRYPRYLATLVSVNNEKLYI 202 (306)
Q Consensus 129 ~~-~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~d~~-~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyi 202 (306)
+. .-.. ........-++ +|++... ......-....++.+|++ +. ....+ .... ...........++++|+
T Consensus 182 l~~~~~~-~~~~~~~SpDG~~la~~~~-~~~~~~~~~~~i~~~d~~~~g~~~~~~~l-~~~~-~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 182 LSDDAHR-FVTGPRLSPDGRQAVWLAW-DHPRMPWEGTELKTARVTEDGRFADTRTL-LGGP-EEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SSCSCSS-EECCCEECTTSSEEEEEEE-CTTCCTTTCEEEEEEEECTTSCEEEEEEE-EEET-TBCEEEEEECTTSCEEE
T ss_pred EEecCCC-cccCceECCCCCEEEEEEC-CCCCCCCCCcEEEEEEECCCCcccccEEe-CCCC-CceEcceEECCCCeEEE
Confidence 54 2221 11111112244 4554442 211100013579999998 56 44444 2111 11222333344677777
Q ss_pred EcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccc----c---cceeeee-CCEEEEEeCccCccccccceEEE
Q psy9754 203 IGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPR----H---AHSASVL-SSQILIIGGVTTVYKRTLKSVEC 274 (306)
Q Consensus 203 ~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~----~---~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~ 274 (306)
.+.... ...++++|+++.+++.+....... . ....+.. ++++++.+.. .. ..+|.
T Consensus 258 ~~~~~~-----------~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~-----~~l~~ 320 (662)
T 3azo_A 258 ATDRTG-----------WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA-----AVLGI 320 (662)
T ss_dssp EECTTS-----------SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS-----CEEEE
T ss_pred EECCCC-----------CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc-----cEEEE
Confidence 665431 146899998888888775432211 0 1123333 6777777654 32 57788
Q ss_pred eeccccceecc
Q psy9754 275 WCFDRQAWIKG 285 (306)
Q Consensus 275 yd~~~~~W~~~ 285 (306)
+|+++++.+.+
T Consensus 321 ~d~~~~~~~~l 331 (662)
T 3azo_A 321 LDPESGELVDA 331 (662)
T ss_dssp EETTTTEEEEC
T ss_pred EECCCCcEEEe
Confidence 88887776553
No 194
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.73 E-value=1.7 Score=36.79 Aligned_cols=150 Identities=14% Similarity=0.076 Sum_probs=77.9
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEe-ccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWED-VAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.+++.|+.+ ..+.+||..+.+-.. +...+....-.+++.. ++.+++.|+.+ +.+..||+.+.+
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR--------GIIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT--------SCEEEEETTTTE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC--------CeEEEEEcCCcc
Confidence 46777777754 568889998876432 2221111111122222 56666666543 468899998876
Q ss_pred eEEcccccCCcceeEEEEEE-----eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEeccc-----------C
Q psy9754 176 WTTLATKLRYPRYLATLVSV-----NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTE-----------L 239 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~-----~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~-----------~ 239 (306)
.... -..... .....+.. .++.+++.|+.. ..+.+||+.+.+-...-. -
T Consensus 248 ~~~~-~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 312 (437)
T 3gre_A 248 LIRS-WSFGDH-APITHVEVCQFYGKNSVIVVGGSSK-------------TFLTIWNFVKGHCQYAFINSDEQPSMEHFL 312 (437)
T ss_dssp EEEE-EBCTTC-EEEEEEEECTTTCTTEEEEEEESTT-------------EEEEEEETTTTEEEEEEESSSSCCCGGGGS
T ss_pred EEEE-EecCCC-CceEEEEeccccCCCccEEEEEcCC-------------CcEEEEEcCCCcEEEEEEcCCCCCccceec
Confidence 5332 111111 11112211 134455655543 567888887655221100 0
Q ss_pred Cc--------------ccccceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 240 VV--------------PRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 240 p~--------------~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
|. ...-.+++..++.+++.|+.+ ..+.+||+++.+-
T Consensus 313 ~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-------~~i~~wd~~~~~~ 362 (437)
T 3gre_A 313 PIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEAT-------SSIVMFSLNELSS 362 (437)
T ss_dssp CBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGG-------TEEEEEETTCGGG
T ss_pred ccccccccceecccccCCceEEEEECCceEEEecCCC-------CeEEEEECCCccc
Confidence 00 011122333477888888877 5788999877653
No 195
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.56 E-value=1.1 Score=34.03 Aligned_cols=146 Identities=12% Similarity=0.117 Sum_probs=76.1
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEE--ec----cCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCcc
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWE--DV----APLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDK 165 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~--~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 165 (306)
+++..++++|+|=| ..+|+++.....+. .+ +.+|. ...++... .++++|+|-| +.
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iDAa~~~~~~~~iyfFkG----------~~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RIDAAYEHPSHDLIFIFRG----------RK 89 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCCEEEEETTTTEEEEEET----------TE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-CccEEEEeccCCcEEEEcc----------CE
Confidence 34456999999976 55777766543322 12 22332 22222222 2689999976 45
Q ss_pred EEEEeCCCCe--e-EEcccccCCc----ceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE---
Q psy9754 166 VECYDPRTNT--W-TTLATKLRYP----RYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK--- 234 (306)
Q Consensus 166 ~~~~d~~~~~--W-~~~~~~~~~~----~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~--- 234 (306)
+++|+..+.. + ..+ ..+..| ... +++... ++++|+|-| ...++||..+++-.
T Consensus 90 ~w~~~~~~~~~gyPk~I-~~~GlP~~~~~ID-AA~~~~~~gk~yfFkG---------------~~ywr~d~~~~~~d~gy 152 (207)
T 1pex_A 90 FWALNGYDILEGYPKKI-SELGLPKEVKKIS-AAVHFEDTGKTLLFSG---------------NQVWRYDDTNHIMDKDY 152 (207)
T ss_dssp EEEESTTCCCTTCSEES-TTTTCCTTCCCCC-EEEECTTTSEEEEEET---------------TEEEEEETTTTEECSSC
T ss_pred EEEEeCCeeccCCceec-cccCCCCCCcccc-EEEEeCCCCEEEEEeC---------------CEEEEEeCcCccccCCC
Confidence 5666533211 1 122 111122 222 333333 489999977 35688987654322
Q ss_pred --ecc-cCC-cccccceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 235 --FVT-ELV-VPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 235 --~~~-~~p-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.+. ..+ .+..-.++...++.+|+|-| +..|.||..+++=
T Consensus 153 Pr~i~~~~~Gip~~iDaAf~~~g~~YfFkg---------~~y~rf~~~~~~v 195 (207)
T 1pex_A 153 PRLIEEDFPGIGDKVDAVYEKNGYIYFFNG---------PIQFEYSIWSNRI 195 (207)
T ss_dssp CCBHHHHSTTSCSCCSEEEEETTEEEEEET---------TEEEEEETTTTEE
T ss_pred CccHHHcCCCCCCCccEEEEcCCcEEEEEC---------CEEEEEeCCccEE
Confidence 111 111 11122333345899999976 4467787766543
No 196
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.52 E-value=1.6 Score=35.67 Aligned_cols=177 Identities=7% Similarity=0.093 Sum_probs=92.1
Q ss_pred EEEEeCCCCCeeeCCCC-CCCc-cceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc-ccccceeeE-EE
Q psy9754 69 VWSFNPNNKQWTQEPNM-TYPR-KIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK-IARMGMAVA-EI 144 (306)
Q Consensus 69 ~~~~d~~t~~W~~~~~~-~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~-~~~~~~~~~-~~ 144 (306)
+++-.-.-.+|+.+... +.+. ....+...++.+|++|.. ..+++-+-.-.+|+++.... .+-....+. .-
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~ 131 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG 131 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEEC
Confidence 44443333579988542 2222 233444457788887531 23444333457899876431 111112232 34
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++.+|+.+. ...+++-+-.-.+|+.+. ... +.....++...++.++++|.. ..++
T Consensus 132 ~~~~~~~~~---------~g~v~~S~DgG~tW~~~~-~~~-~~~~~~~~~~~~~~~~~~g~~--------------G~~~ 186 (327)
T 2xbg_A 132 NGSAEMITN---------VGAIYRTKDSGKNWQALV-QEA-IGVMRNLNRSPSGEYVAVSSR--------------GSFY 186 (327)
T ss_dssp TTEEEEEET---------TCCEEEESSTTSSEEEEE-CSC-CCCEEEEEECTTSCEEEEETT--------------SSEE
T ss_pred CCCEEEEeC---------CccEEEEcCCCCCCEEee-cCC-CcceEEEEEcCCCcEEEEECC--------------CcEE
Confidence 678888763 123555443456899983 322 222334444445777776532 1233
Q ss_pred EE-ECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeec-cccceecc
Q psy9754 225 VF-VSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCF-DRQAWIKG 285 (306)
Q Consensus 225 ~y-~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~-~~~~W~~~ 285 (306)
+- |....+|+.+.. +.....+.++.. ++.+|+++.. ..+++.+. ...+|+.+
T Consensus 187 ~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~--------G~~~~s~~D~G~tW~~~ 241 (327)
T 2xbg_A 187 STWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG--------GKIAFSDPDNSENWGEL 241 (327)
T ss_dssp EEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT--------TEEEEEETTEEEEECCC
T ss_pred EEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC--------ceEEEecCCCCCeeEec
Confidence 33 222578998854 333344444443 6788877642 23445433 36789873
No 197
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.43 E-value=2.9 Score=38.24 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=62.7
Q ss_pred eceEEEEeCCCCC--eeeCCCCCCC--------ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccC-C
Q psy9754 66 SNSVWSFNPNNKQ--WTQEPNMTYP--------RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAP-L 132 (306)
Q Consensus 66 ~~~~~~~d~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~-~ 132 (306)
...++.+|..|++ |+.-...+.. ....+.+..+++||+... ...++.+|..+++ |+.-.. -
T Consensus 79 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 79 FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEEEEEECCCCCEeeeecCcCC
Confidence 3568999998876 8765433211 112234556889988753 2568899998886 875432 1
Q ss_pred cc--cccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 133 KI--ARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 133 ~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
+. ......-++.++.+|+-.+..... ....+..||.++.+ |+.-
T Consensus 153 ~~~~~~~~~sP~v~~g~v~vg~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNGKVVIGNGGAEFG---VRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTSCCBCCSCCEEETTEEEECCBCTTTC---CBCEEEEEETTTCCEEEEEE
T ss_pred CCCCccccCCcEEECCEEEEEeCCCccC---CCCEEEEEECCCCcEEEEec
Confidence 11 111223345688887743322111 14689999998876 8653
No 198
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.41 E-value=2 Score=36.16 Aligned_cols=190 Identities=11% Similarity=0.120 Sum_probs=99.4
Q ss_pred eEEEEeCCC--CCeeeCCCCCCCccceeeEEE---CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC---ccc--c-
Q psy9754 68 SVWSFNPNN--KQWTQEPNMTYPRKIFSFVSC---LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL---KIA--R- 136 (306)
Q Consensus 68 ~~~~~d~~t--~~W~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~---~~~--~- 136 (306)
-+++++... .+|+...+.......++++.. ++.||+.+.... .-..+++.+-...+|+++... +.. +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccccc
Confidence 366676544 689876422222223334433 467888754211 112577777778899988632 211 0
Q ss_pred ------cceeeEEE----CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccc--cCC--------------cceeE
Q psy9754 137 ------MGMAVAEI----NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATK--LRY--------------PRYLA 190 (306)
Q Consensus 137 ------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--~~~--------------~~~~~ 190 (306)
.-..++.. .+.||+.+. ...+++.+-...+|+.+... .+. ....+
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 11122232 567777542 24678887778899988321 111 11122
Q ss_pred EEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccC------Ccc-----cccceeeee-C--CE
Q psy9754 191 TLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTEL------VVP-----RHAHSASVL-S--SQ 254 (306)
Q Consensus 191 ~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~------p~~-----~~~~~~~~~-~--~~ 254 (306)
+++... ++.||+.... ..+++.+-...+|+.+... |.. ...+.++.. . +.
T Consensus 181 ~i~~d~~~~~~l~vg~~~--------------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~ 246 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSS--------------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDI 246 (394)
T ss_dssp EEEECTTCTTCEEEEEET--------------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTE
T ss_pred EEEECCCCCCEEEEEECC--------------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCE
Confidence 333321 3567775422 2356666667789977531 211 112333332 2 56
Q ss_pred EEEEeCccCccccccceEEEeeccccceeccCCCCcc
Q psy9754 255 ILIIGGVTTVYKRTLKSVECWCFDRQAWIKGVSGLPA 291 (306)
Q Consensus 255 i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~p~ 291 (306)
||+... ..+++.+....+|+.+...+|.
T Consensus 247 l~vg~~---------~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 247 LYQQNH---------CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp EEEEET---------TEEEEEETTTTEEECGGGGSCT
T ss_pred EEEEcC---------CeEEEeCCCCCcceECCCCCCC
Confidence 666421 3578888888999885433554
No 199
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.40 E-value=1.2 Score=40.78 Aligned_cols=150 Identities=11% Similarity=0.072 Sum_probs=81.2
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
.++.||+.... ...++++++....-+.+....... -.++++ .++.||+..- .. ...|+++++...
T Consensus 463 ~~g~LY~tD~~-----~~~I~v~d~dg~~~~~l~~~~~~~-P~giavDp~~g~ly~td~----~~---~~~I~~~~~dG~ 529 (699)
T 1n7d_A 463 IHSNIYWTDSV-----LGTVSVADTKGVKRKTLFREQGSK-PRAIVVDPVHGFMYWTDW----GT---PAKIKKGGLNGV 529 (699)
T ss_dssp SSSBCEECCTT-----TSCEEEEBSSSCCEEEECCCSSCC-CCCEECCSSSSCCEECCC----SS---SCCEEBCCSSSC
T ss_pred eCCcEEEEecc-----CCeEEEEecCCCceEEEEeCCCCC-cceEEEccCCCcEEEccc----CC---CCeEEEEeCCCC
Confidence 36788887432 356888888876544442211111 112222 3578887541 11 256788877644
Q ss_pred eeEEcc-cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc-ccccceeeee
Q psy9754 175 TWTTLA-TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-PRHAHSASVL 251 (306)
Q Consensus 175 ~W~~~~-~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-~~~~~~~~~~ 251 (306)
.-+.+. ..+..|. +++.. .+++||+..... ..|++++++...-+.+...+. ...-.++++.
T Consensus 530 ~~~~l~~~~l~~Pn---Glavd~~~~~LY~aD~~~-------------~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd 593 (699)
T 1n7d_A 530 DIYSLVTENIQWPN---GITLDLLSGRLYWVDSKL-------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 593 (699)
T ss_dssp CCCEESCSSCSSCC---CEEECTTTCCEEEEETTT-------------TEEEEECSSSSCCEEECCCSSSCSSCCCCEEE
T ss_pred CeeEEEeCCCCCcc---EEEEeccCCEEEEEecCC-------------CeEEEEccCCCceEEEEecCCcCCCceEeEEE
Confidence 333331 2222232 23332 247899986432 568888887544343332211 1223456666
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+++||+.-... ..|.++++.+++-
T Consensus 594 ~~~lywtd~~~-------~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 594 EDKVFWTDIIN-------EAIFSANRLTGSD 617 (699)
T ss_dssp TTEEEEECSTT-------TCEEEEETTTEEE
T ss_pred CCEEEEEeCCC-------CeEEEEEccCCCc
Confidence 78999987433 5788888766554
No 200
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.32 E-value=1.8 Score=35.26 Aligned_cols=166 Identities=11% Similarity=0.039 Sum_probs=83.7
Q ss_pred eceEEEEeCCC----CCeeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce
Q psy9754 66 SNSVWSFNPNN----KQWTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM 139 (306)
Q Consensus 66 ~~~~~~~d~~t----~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~ 139 (306)
...++++++.. ..-+.+-+...... ..++. .++.||+.-.. ...+.++|+....-+.+...... .-.
T Consensus 51 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~-~P~ 123 (316)
T 1ijq_A 51 QRMICSTQLDRAHGVSSYDTVISRDIQAP-DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGS-KPR 123 (316)
T ss_dssp TTEEEEEEC--------CEEEECSSCSCC-CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTC-CEE
T ss_pred CCcEEEEECCCCCCCcccEEEEeCCCCCc-CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCC-Ccc
Confidence 35788888875 22222211111111 23333 36899998432 25688899876554433211111 112
Q ss_pred eeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCccc
Q psy9754 140 AVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQK 216 (306)
Q Consensus 140 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~ 216 (306)
..++ .++.||+..-.. ...++++++....-+.+ ..... ..-.+++.. .+++||+.....
T Consensus 124 ~iavdp~~g~ly~~d~~~-------~~~I~~~~~dG~~~~~~-~~~~~-~~P~gla~d~~~~~lY~~D~~~--------- 185 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWGT-------PAKIKKGGLNGVDIYSL-VTENI-QWPNGITLDLLSGRLYWVDSKL--------- 185 (316)
T ss_dssp EEEEETTTTEEEEEECSS-------SCEEEEEETTSCCEEEE-ECSSC-SCEEEEEEETTTTEEEEEETTT---------
T ss_pred eEEeCCCCCEEEEEccCC-------CCeEEEEcCCCCCeEEE-EECCC-CCceEEEEeccCCEEEEEECCC---------
Confidence 3333 368999875211 25789998865443333 11111 111233333 258999986542
Q ss_pred ccccceeeEEECCCCceEecccCC-cccccceeeeeCCEEEEEeC
Q psy9754 217 MYSVSDLDVFVSNEKEWKFVTELV-VPRHAHSASVLSSQILIIGG 260 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W~~~~~~p-~~~~~~~~~~~~~~i~v~GG 260 (306)
..++++|++...-+.+.... ....-.++++.++.||+..-
T Consensus 186 ----~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 186 ----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp ----TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred ----CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC
Confidence 57889998754333332211 11122355556788888764
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.31 E-value=3.1 Score=38.00 Aligned_cols=193 Identities=11% Similarity=-0.031 Sum_probs=94.7
Q ss_pred eceEEEEeCCCCCee--eCCCCCC-CccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceee
Q psy9754 66 SNSVWSFNPNNKQWT--QEPNMTY-PRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~--~~~~~~~-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~ 141 (306)
...+++++..+++-+ .+...+. +......... +++..++...... ....++.+|..+..++.+........ ..
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~--~~ 277 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAKY--EV 277 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCCE--EE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCceE--EE
Confidence 456899998877632 2222222 2222333333 4544444332211 23577888877777877754332222 22
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe---eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT---WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
+..++.+|+....... ...+..+|+.+.. |+.+.+..+. ..-...... ++++++......
T Consensus 278 ~~~~g~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~~~~~-~~~lv~~~~~dg---------- 340 (695)
T 2bkl_A 278 HAWKDRFYVLTDEGAP-----RQRVFEVDPAKPARASWKEIVPEDSS-ASLLSVSIV-GGHLSLEYLKDA---------- 340 (695)
T ss_dssp EEETTEEEEEECTTCT-----TCEEEEEBTTBCSGGGCEEEECCCSS-CEEEEEEEE-TTEEEEEEEETT----------
T ss_pred EecCCcEEEEECCCCC-----CCEEEEEeCCCCCccCCeEEecCCCC-CeEEEEEEE-CCEEEEEEEECC----------
Confidence 2246666665433211 3678999987654 8887322211 111222233 488877754322
Q ss_pred ccceeeEEECCCCceEecccCCcccccceeee-eCC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
...++.+++....-..+. ++.......... -++ .+++..... ..-..++.||+++++.+.
T Consensus 341 -~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~----~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 341 -TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSF----TTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp -EEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEEET----TEEEEEEEEETTTCCEEE
T ss_pred -EEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEcCC----CCCCEEEEEECCCCcEEE
Confidence 256788887544333332 221111111111 244 444332221 112578899988777644
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.31 E-value=3.1 Score=38.06 Aligned_cols=191 Identities=9% Similarity=-0.018 Sum_probs=96.7
Q ss_pred eceEEEEeCCCCCee--eCCCCC-CCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCC------C--cEEeccCCc
Q psy9754 66 SNSVWSFNPNNKQWT--QEPNMT-YPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVA------H--TWEDVAPLK 133 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~--~~~~~~-~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~------~--~w~~~~~~~ 133 (306)
...+++++..+++.+ .+...+ .+......... +++..++...........++++|..+ . .++.+....
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 456899999887643 221222 22222333333 45433333222211246788999876 4 566665432
Q ss_pred ccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCC---eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCC
Q psy9754 134 IARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTN---TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTD 210 (306)
Q Consensus 134 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~ 210 (306)
.... .....-++.||+.+..... ...++.+|+.+. .|+.+.+.... ..-.......++++++......
T Consensus 287 ~~~~-~~~s~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~~~g-- 357 (710)
T 2xdw_A 287 EGEY-DYVTNEGTVFTFKTNRHSP-----NYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYLHDV-- 357 (710)
T ss_dssp SSCE-EEEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEEETT--
T ss_pred CcEE-EEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEEECC--
Confidence 2221 1233346788888654321 357899998875 48887332221 1222233333578877654321
Q ss_pred CCCcccccccceeeEEECCCCc-eEecccCCcccccceeee-eCC-EEEEEe-CccCccccccceEEEeeccccc
Q psy9754 211 ATNTQKMYSVSDLDVFVSNEKE-WKFVTELVVPRHAHSASV-LSS-QILIIG-GVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 211 ~~~~~~~~~~~~~~~y~~~~~~-W~~~~~~p~~~~~~~~~~-~~~-~i~v~G-G~~~~~~~~~~~~~~yd~~~~~ 281 (306)
...++++++.+++ ...+. ++.. ...+... -++ .+++.. +... -.+++.||+.+++
T Consensus 358 ---------~~~l~~~~~~~g~~~~~l~-~~~~-~v~~~~~s~d~~~l~~~~ss~~~-----P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 ---------KNTLQLHDLATGALLKIFP-LEVG-SVVGYSGQKKDTEIFYQFTSFLS-----PGIIYHCDLTKEE 416 (710)
T ss_dssp ---------EEEEEEEETTTCCEEEEEC-CCSS-EEEEEECCTTCSEEEEEEECSSC-----CCEEEEEETTSSS
T ss_pred ---------EEEEEEEECCCCCEEEecC-CCCc-eEEEEecCCCCCEEEEEEeCCCC-----CCEEEEEECCCCc
Confidence 2568889985554 33333 2211 1111111 134 444432 2222 2578999988766
No 203
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.29 E-value=1 Score=37.36 Aligned_cols=154 Identities=6% Similarity=-0.083 Sum_probs=77.7
Q ss_pred ceeEEEeCCCCcEEeccCCcccccceeeEEE-CC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEE
Q psy9754 114 SSVECYDPVAHTWEDVAPLKIARMGMAVAEI-ND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLAT 191 (306)
Q Consensus 114 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 191 (306)
..++++|..+++.+.+...... ..+....- ++ +|++... .... .....++.+|+....+..+ ...........
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~-~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~ 242 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAW-LGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKI-KEHAEGESCTH 242 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSC-EEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEES-SCCCTTEEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcc-cccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEe-eccCCCccccc
Confidence 5688899988887665432111 11112222 23 4555542 1111 0125789999988887777 33111111122
Q ss_pred EEEEeCCE-EEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCc-----
Q psy9754 192 LVSVNNEK-LYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTV----- 264 (306)
Q Consensus 192 ~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~----- 264 (306)
.....+++ |++.. ..... ....++++|+.+.+.+.+...+.. . ....- +++++++.+....
T Consensus 243 ~~~spdg~~l~~~~-~~~~~--------~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~ 310 (396)
T 3c5m_A 243 EFWIPDGSAMAYVS-YFKGQ--------TDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVAD 310 (396)
T ss_dssp EEECTTSSCEEEEE-EETTT--------CCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC------
T ss_pred eEECCCCCEEEEEe-cCCCC--------ccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecc
Confidence 23333455 44442 21111 013489999988877766554421 1 22223 6776666442210
Q ss_pred ----cccccceEEEeeccccceec
Q psy9754 265 ----YKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 265 ----~~~~~~~~~~yd~~~~~W~~ 284 (306)
.......++++|+++++...
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 311 ADSYNIENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp ----CCCCCCEEEEEETTTTBCCE
T ss_pred ccccccCCCCcEEEEecccCceEE
Confidence 00122579999998877654
No 204
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.28 E-value=2.4 Score=38.03 Aligned_cols=122 Identities=15% Similarity=0.155 Sum_probs=67.9
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeC-CCCc--EEeccCCcccc--------cceeeEE--ECCE----EEEEccc
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDP-VAHT--WEDVAPLKIAR--------MGMAVAE--INDK----IWIAGGY 154 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~-~~~~--w~~~~~~~~~~--------~~~~~~~--~~~~----iyv~GG~ 154 (306)
.+.+..++.||+.... ...++.+|. .+++ |+.-....... .....++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp SCCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred eccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 4455679999998652 246889999 7775 88654332211 1123344 5666 887532
Q ss_pred CCCCCCCCCccEEEEeCCCCe--eEEcccccCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCC
Q psy9754 155 TGDKMNPVTDKVECYDPRTNT--WTTLATKLRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK 231 (306)
Q Consensus 155 ~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~ 231 (306)
-..++.+|.++.+ |+.-....... ....+.++.+ +.||+-.+..+.. ....++.||.++.
T Consensus 130 --------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~-g~V~vg~~g~e~g--------~~g~v~A~D~~TG 192 (599)
T 1w6s_A 130 --------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVK-DKVIIGSSGAELG--------VRGYLTAYDVKTG 192 (599)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-TEEEECCBCGGGT--------CCCEEEEEETTTC
T ss_pred --------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEEC-CEEEEEecccccC--------CCCeEEEEECCCC
Confidence 2578999988775 87541221111 1112233444 7776643211100 1156889999876
Q ss_pred c--eEec
Q psy9754 232 E--WKFV 236 (306)
Q Consensus 232 ~--W~~~ 236 (306)
+ |+.-
T Consensus 193 ~~~W~~~ 199 (599)
T 1w6s_A 193 EQVWRAY 199 (599)
T ss_dssp CEEEEEE
T ss_pred cEEEEEc
Confidence 5 7743
No 205
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.27 E-value=1.7 Score=34.98 Aligned_cols=174 Identities=12% Similarity=0.003 Sum_probs=90.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~ 144 (306)
..+++||+..+ .......+ ..-+.++.. ++++|+...... ...++++|+.+++.+.+...+..+.....+. .
T Consensus 53 ~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~ 126 (306)
T 2p4o_A 53 GEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS 126 (306)
T ss_dssp TEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEESS
T ss_pred CeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCcccccC
Confidence 56899998764 22221111 222333333 678888853221 1357889988888877655544333333332 3
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe---eEEcccc----cCCc-ceeEEEEEEeCCEEEEEcCCCCCCCCCccc
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT---WTTLATK----LRYP-RYLATLVSVNNEKLYIIGGASQTDATNTQK 216 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~----~~~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~ 216 (306)
++.+|+..- ....++++|+.+.. |..- .. .+.. ......+....+.||+..-..
T Consensus 127 ~~~~~v~d~--------~~g~i~~~d~~~~~~~v~~~~-~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~--------- 188 (306)
T 2p4o_A 127 DTQYLTADS--------YRGAIWLIDVVQPSGSIWLEH-PMLARSNSESVFPAANGLKRFGNFLYVSNTEK--------- 188 (306)
T ss_dssp SSEEEEEET--------TTTEEEEEETTTTEEEEEEEC-GGGSCSSTTCCSCSEEEEEEETTEEEEEETTT---------
T ss_pred CCcEEEEEC--------CCCeEEEEeCCCCcEeEEEEC-CccccccccCCCCcCCCcCcCCCEEEEEeCCC---------
Confidence 456777531 03678999987642 2111 10 1111 111122233436888875432
Q ss_pred ccccceeeEEECCC-CceE---ecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeecc
Q psy9754 217 MYSVSDLDVFVSNE-KEWK---FVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 217 ~~~~~~~~~y~~~~-~~W~---~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
..+++|+++. .+.. .+..+. .-.+++.- ++++|+..... +.+.+||++
T Consensus 189 ----~~I~~~~~~~~g~~~~~~~~~~~~---~P~gi~vd~dG~l~va~~~~-------~~V~~~~~~ 241 (306)
T 2p4o_A 189 ----MLLLRIPVDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATHIY-------NSVVRIAPD 241 (306)
T ss_dssp ----TEEEEEEBCTTSCBCCCEEEEESC---CCSSEEEBTTCCEEEECBTT-------CCEEEECTT
T ss_pred ----CEEEEEEeCCCCCCCccEEEeccC---CCCCeEECCCCCEEEEeCCC-------CeEEEECCC
Confidence 5789998875 2221 111111 11233333 77888875433 568888886
No 206
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.22 E-value=3.2 Score=37.87 Aligned_cols=190 Identities=8% Similarity=0.017 Sum_probs=95.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCC--------CCCceeEEEeCCCCcEE--eccCCccc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCK--------TLLSSVECYDPVAHTWE--DVAPLKIA 135 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~--------~~~~~~~~~d~~~~~w~--~~~~~~~~ 135 (306)
..++.+|..+++......++.... ..++-. +++.+++...+.. .....+++++..+.+-+ .+-..+..
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~ 225 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD 225 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC
T ss_pred EEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC
Confidence 579999999988641111221111 233333 5555555544322 23456888988877632 22222111
Q ss_pred -ccceeeE-EECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCC
Q psy9754 136 -RMGMAVA-EINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATN 213 (306)
Q Consensus 136 -~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~ 213 (306)
....... .-+++..++....... ...++.+|..+..++.+ ........ ..+. .++.+|+......
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~----~~~l~~~~~~~~~~~~l-~~~~~~~~--~~~~-~~g~l~~~s~~~~----- 292 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWS----ENDVYWKRPGEKDFRLL-VKGVGAKY--EVHA-WKDRFYVLTDEGA----- 292 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTT----EEEEEEECTTCSSCEEE-EECSSCCE--EEEE-ETTEEEEEECTTC-----
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCC----ceEEEEEcCCCCceEEe-ecCCCceE--EEEe-cCCcEEEEECCCC-----
Confidence 1111222 2244433333322111 35788888777778887 32222222 2222 3456666543321
Q ss_pred cccccccceeeEEECCCCc---eEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 214 TQKMYSVSDLDVFVSNEKE---WKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 214 ~~~~~~~~~~~~y~~~~~~---W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
....++++|+++.. |+.+..-............++++++....+.. ..+++++++..
T Consensus 293 -----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~-----~~l~~~~~~g~ 352 (695)
T 2bkl_A 293 -----PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDAT-----SEVRVATLKGK 352 (695)
T ss_dssp -----TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTE-----EEEEEEETTCC
T ss_pred -----CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCE-----EEEEEEeCCCC
Confidence 12578889887654 77665322121222333448888877655432 56788886544
No 207
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.20 E-value=1.8 Score=34.81 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=35.1
Q ss_pred CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccc-eeeee-CC----EEEEEeCccCccccccce
Q psy9754 198 EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAH-SASVL-SS----QILIIGGVTTVYKRTLKS 271 (306)
Q Consensus 198 ~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~-~~~~~-~~----~i~v~GG~~~~~~~~~~~ 271 (306)
+.+++.++.. ..+..++........+..++...... +++.. ++ .+++.|+.+ ..
T Consensus 182 ~~~l~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d-------g~ 241 (351)
T 3f3f_A 182 PEKLAVSALE-------------QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD-------GR 241 (351)
T ss_dssp CCEEEEEETT-------------EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT-------SC
T ss_pred CcEEEEecCC-------------CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC-------Ce
Confidence 5566666543 33455555566655444443322222 22222 44 788888776 46
Q ss_pred EEEeecccc
Q psy9754 272 VECWCFDRQ 280 (306)
Q Consensus 272 ~~~yd~~~~ 280 (306)
+.+||+.+.
T Consensus 242 i~iwd~~~~ 250 (351)
T 3f3f_A 242 IRIFKITEK 250 (351)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeCCCC
Confidence 888888764
No 208
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.15 E-value=2.1 Score=35.59 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=76.0
Q ss_pred EEEEEccCCCCCCCceeEEEeCCCCcEEec--cCCcccccce--eeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 100 KIYAIGGQDCKTLLSSVECYDPVAHTWEDV--APLKIARMGM--AVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 100 ~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~--~~~~~~~~~~--~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
..++.|+.+ ..+.+||..+++-... ...+..+... .+.. .++.+++.|+.+ ..+..+|+..
T Consensus 171 ~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~ 237 (380)
T 3iz6_a 171 TRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDLRI 237 (380)
T ss_dssp SCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEETTT
T ss_pred CEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEECCC
Confidence 344455543 4577788888764332 1222222211 1111 256777777644 4678888763
Q ss_pred C--eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcc-----c-cc
Q psy9754 174 N--TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVP-----R-HA 245 (306)
Q Consensus 174 ~--~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~-----~-~~ 245 (306)
. .-..+ .....+ -.++....++..++.|+.. ..+.+||+.+..-...-..... . ..
T Consensus 238 ~~~~~~~~-~~h~~~--v~~v~~~p~~~~l~s~s~D-------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 238 TSRAVRTY-HGHEGD--INSVKFFPDGQRFGTGSDD-------------GTCRLFDMRTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp TCCCCEEE-CCCSSC--CCEEEECTTSSEEEEECSS-------------SCEEEEETTTTEEEEEECCCCSSSCCSSCSC
T ss_pred CCcceEEE-CCcCCC--eEEEEEecCCCeEEEEcCC-------------CeEEEEECCCCcEEEEecccccccccccCce
Confidence 2 22233 111111 1133344457777777764 5678899887653322111111 0 11
Q ss_pred ceeee-eCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 246 HSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 246 ~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.+++. .++++++.|+.+ ..+.+||..+.+-
T Consensus 302 ~~~~~s~~g~~l~~g~~d-------g~i~vwd~~~~~~ 332 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSN-------GDCYVWDTLLAEM 332 (380)
T ss_dssp SEEEECSSSSEEEEECTT-------SCEEEEETTTCCE
T ss_pred EEEEECCCCCEEEEEECC-------CCEEEEECCCCce
Confidence 22222 378888888776 5788999876654
No 209
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.13 E-value=0.36 Score=41.06 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=58.4
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++.+++.|+.+ ..+..+|+.+.+-.......+....-.+++...++..++.|+.. ..+.
T Consensus 181 ~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------------g~i~ 239 (437)
T 3gre_A 181 EKSLLVALTNL--------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------------GIID 239 (437)
T ss_dssp SCEEEEEEETT--------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------------SCEE
T ss_pred CCCEEEEEeCC--------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------------CeEE
Confidence 46666666543 57899999877643321111111122233333357777777654 5588
Q ss_pred EEECCCCceEecccCCcccccceeee-----eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 225 VFVSNEKEWKFVTELVVPRHAHSASV-----LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 225 ~y~~~~~~W~~~~~~p~~~~~~~~~~-----~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+||+.+.+....-.++....-.+++. -++.+++.|+.+ ..+.+||.++++
T Consensus 240 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~ 294 (437)
T 3gre_A 240 IWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-------TFLTIWNFVKGH 294 (437)
T ss_dssp EEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-------EEEEEEETTTTE
T ss_pred EEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-------CcEEEEEcCCCc
Confidence 99998765432222121111112211 145566777666 578899987655
No 210
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.05 E-value=2.2 Score=35.32 Aligned_cols=199 Identities=7% Similarity=-0.062 Sum_probs=95.9
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeE--E
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVA--E 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~--~ 143 (306)
..+|.+|+.+++-..+...+..........-++ .|+.... + ..++++|+.+++-+.+...+......... .
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~-~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 133 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD-G-----RNLMRVDLATLEENVVYQVPAEWVGYGTWVAN 133 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET-T-----TEEEEEETTTCCEEEEEECCTTEEEEEEEEEC
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC-C-----CeEEEEECCCCcceeeeechhhcccccceeEC
Confidence 479999999988777765443222112222244 4444432 1 47888999988866655444332221111 2
Q ss_pred ECCEEEEE-c--ccCCCC-----------CCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe-CCEEEEEcCCCC
Q psy9754 144 INDKIWIA-G--GYTGDK-----------MNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN-NEKLYIIGGASQ 208 (306)
Q Consensus 144 ~~~~iyv~-G--G~~~~~-----------~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~ 208 (306)
-+++.++. - +..... .......++.+|+.+.+-..+ .... .... ...... +++.+++.....
T Consensus 134 ~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~-~~~~-~~~~sp~dg~~l~~~~~~~ 210 (388)
T 3pe7_A 134 SDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI-LQEN-QWLG-HPIYRPYDDSTVAFCHEGP 210 (388)
T ss_dssp TTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE-EEES-SCEE-EEEEETTEEEEEEEEECSC
T ss_pred CCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe-ecCC-cccc-ccEECCCCCCEEEEEEecC
Confidence 23333321 1 000000 000136799999998876666 2221 1122 222222 354433322211
Q ss_pred CCCCCcccccccceeeEEECCCCceEecccCCcccccceeee-eCCE-EEEEeCccCccccccceEEEeeccccceec
Q psy9754 209 TDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQ-ILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 209 ~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
... ....++.+|++......+............+. -+++ |+++..... .....++++|+++++-+.
T Consensus 211 ~~~-------~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~~l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 211 HDL-------VDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG---SPDRFIYSADPETLENRQ 278 (388)
T ss_dssp TTT-------SSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT---CCCEEEEEECTTTCCEEE
T ss_pred CCC-------CcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC---CCcceEEEEecCCCceEE
Confidence 100 12578999988776666554322111112222 2555 544433221 111248999998877544
No 211
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.04 E-value=2 Score=34.91 Aligned_cols=150 Identities=13% Similarity=0.173 Sum_probs=70.9
Q ss_pred EEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc-ccc--eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCC--
Q psy9754 101 IYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA-RMG--MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTN-- 174 (306)
Q Consensus 101 iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~-~~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~-- 174 (306)
+++.|+.+ ..+.+||..++..+.+..+... +.. ..++.. ++.+++.|+.+ ..+..+|....
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D--------~~v~iw~~~~~~~ 92 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD--------STVSIWAKEESAD 92 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT--------SCEEEEEC-----
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC--------CcEEEEEcccCcC
Confidence 55555544 4466778776554433322111 111 122222 45666666543 45677776432
Q ss_pred ---eeEEcccccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCC--CceEecccCCccccccee
Q psy9754 175 ---TWTTLATKLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNE--KEWKFVTELVVPRHAHSA 248 (306)
Q Consensus 175 ---~W~~~~~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~--~~W~~~~~~p~~~~~~~~ 248 (306)
.+..+ ..+.. ...-.++....+++.++.|+.. ..+.+||+.. ..++.+..+.........
T Consensus 93 ~~~~~~~~-~~~~~h~~~V~~v~~sp~g~~las~s~D-------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 93 RTFEMDLL-AIIEGHENEVKGVAWSNDGYYLATCSRD-------------KSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp --CCCEEE-EEEC----CEEEEEECTTSCEEEEEETT-------------SCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred ccccceeE-EEEcCCCCcEEEEEECCCCCEEEEEeCC-------------CEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 12222 11110 1111122233356776776654 4578888843 334444333222221222
Q ss_pred eee--CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 249 SVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 249 ~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
+.. ++.+++.|+.+ ..+.+||..+..|+.
T Consensus 159 v~~~p~~~~l~s~s~D-------~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 159 VIWHPSEALLASSSYD-------DTVRIWKDYDDDWEC 189 (330)
T ss_dssp EEECSSSSEEEEEETT-------SCEEEEEEETTEEEE
T ss_pred EEECCCCCEEEEEcCC-------CeEEEEECCCCCeeE
Confidence 222 67788888777 467888887666543
No 212
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.95 E-value=2 Score=34.75 Aligned_cols=144 Identities=10% Similarity=0.098 Sum_probs=69.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEE-eccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWE-DVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
+++.++.|+.+ ..+.+||..+++-. .+...... -..+... ++.+++.|+.+ ..+..+|.....
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~s~D--------~~i~vwd~~~~~ 140 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVGHKSD--VMSVDIDKKASMIISGSRD--------KTIKVWTIKGQC 140 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC--EEEEEECTTSCEEEEEETT--------SCEEEEETTSCE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEccCCCc--EEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCe
Confidence 56666666654 56778898887632 22111111 1112222 45566666543 457788877655
Q ss_pred eEEcccccCCcceeEEEEEEe------CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccccc-cee
Q psy9754 176 WTTLATKLRYPRYLATLVSVN------NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHA-HSA 248 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~~------~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~-~~~ 248 (306)
-..+ ...... . ..+.... ++.+++.|+.. ..+.+||+.+.+-.. .+...... .++
T Consensus 141 ~~~~-~~h~~~-v-~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~--~~~~h~~~v~~~ 202 (319)
T 3frx_A 141 LATL-LGHNDW-V-SQVRVVPNEKADDDSVTIISAGND-------------KMVKAWNLNQFQIEA--DFIGHNSNINTL 202 (319)
T ss_dssp EEEE-CCCSSC-E-EEEEECCC------CCEEEEEETT-------------SCEEEEETTTTEEEE--EECCCCSCEEEE
T ss_pred EEEE-eccCCc-E-EEEEEccCCCCCCCccEEEEEeCC-------------CEEEEEECCcchhhe--eecCCCCcEEEE
Confidence 4444 111111 1 1121211 13355555543 457888887654321 11111111 112
Q ss_pred ee-eCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 249 SV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 249 ~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
+. .++++++.|+.+ ..+.+||+.+.+
T Consensus 203 ~~sp~g~~l~s~~~d-------g~i~iwd~~~~~ 229 (319)
T 3frx_A 203 TASPDGTLIASAGKD-------GEIMLWNLAAKK 229 (319)
T ss_dssp EECTTSSEEEEEETT-------CEEEEEETTTTE
T ss_pred EEcCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 22 267777777766 456677765543
No 213
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.90 E-value=2.6 Score=38.60 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=52.4
Q ss_pred cEEEEeCCC-CeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCccc
Q psy9754 165 KVECYDPRT-NTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPR 243 (306)
Q Consensus 165 ~~~~~d~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~ 243 (306)
.++.+|+.+ .+-..+............+.. .+++.+++....... ....++++|+.+.+...+.......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~--------~~~~i~~~d~~~g~~~~~~~~~~~~ 334 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ--------KKLDLVEVTLASNQQRVLAHETSPT 334 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS--------SEEEEEEEETTTCCEEEEEEEECSS
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC--------CeEEEEEEECCCCceEEEEEcCCCC
Confidence 788889888 765555211111222223333 445544443322111 1267899999888766543322111
Q ss_pred ---ccceeeee-CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 244 ---HAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 244 ---~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
....++.. ++++++.+..+. ...+|.+|.+.. ...
T Consensus 335 ~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~~~~~~-~~~ 373 (741)
T 2ecf_A 335 WVPLHNSLRFLDDGSILWSSERTG-----FQHLYRIDSKGK-AAA 373 (741)
T ss_dssp CCCCCSCCEECTTSCEEEEECTTS-----SCEEEEECSSSC-EEE
T ss_pred cCCcCCceEECCCCeEEEEecCCC-----ccEEEEEcCCCC-eee
Confidence 01122222 677666665442 146777776554 433
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.84 E-value=4 Score=37.59 Aligned_cols=193 Identities=12% Similarity=0.071 Sum_probs=97.4
Q ss_pred eceEEEEeCCCCCee--eCCCCC-CCccceeeEEE-CCE-EEEEccCCCCCCCceeEEEeCCCC--c-EEeccCCccccc
Q psy9754 66 SNSVWSFNPNNKQWT--QEPNMT-YPRKIFSFVSC-LDK-IYAIGGQDCKTLLSSVECYDPVAH--T-WEDVAPLKIARM 137 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~--~~~~~~-~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~d~~~~--~-w~~~~~~~~~~~ 137 (306)
...+++++..+++-. .+...+ .+......... +++ |++... ........++++|..+. . ++.+........
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~-~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS-EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE-CTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE-ccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 456888887766521 121112 12222333333 554 444433 22123468899998877 6 777754332222
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCC--CeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcc
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRT--NTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~ 215 (306)
.. +...++.||+....... ...++.+|+.+ ..|+.+.+... .. -......+ +++++......
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~l~~~~~-~~-l~~~~~~~-~~lv~~~~~dg------- 384 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAP-----LKKIVRVDLSGSTPRFDTVVPESK-DN-LESVGIAG-NRLFASYIHDA------- 384 (741)
T ss_dssp EE-EEEETTEEEEEECTTCT-----TCEEEEEECSSSSCEEEEEECCCS-SE-EEEEEEEB-TEEEEEEEETT-------
T ss_pred EE-EeccCCEEEEEECCCCC-----CCEEEEEeCCCCccccEEEecCCC-Ce-EEEEEEEC-CEEEEEEEECC-------
Confidence 22 23456788877543221 35799999887 57988732221 11 11222334 78877654321
Q ss_pred cccccceeeEEECCCCceEecccCCcccccceeee-eCC-EEEEEeCccCccccccceEEEeeccccceec
Q psy9754 216 KMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSS-QILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
...++++++....-..+. +|.......... -++ .|++..... ..-.+++.||+.+++.+.
T Consensus 385 ----~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~----~~P~~i~~~d~~tg~~~~ 446 (741)
T 1yr2_A 385 ----KSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSF----TQPATVLALDPATAKTTP 446 (741)
T ss_dssp ----EEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEEEEET----TEEEEEEEEETTTTEEEE
T ss_pred ----EEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEEEcCC----CCCCEEEEEECCCCcEEE
Confidence 256788887544333332 222111111111 233 344432211 112678999998877655
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.78 E-value=0.072 Score=44.78 Aligned_cols=94 Identities=11% Similarity=0.046 Sum_probs=38.2
Q ss_pred ceEEEEeCCCCC--eeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCC--cEEeccCCcccccceeeE
Q psy9754 67 NSVWSFNPNNKQ--WTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAH--TWEDVAPLKIARMGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~w~~~~~~~~~~~~~~~~ 142 (306)
..++.+|..+++ |+.-.. ......+..++.+|+.+..+ ..++.+|..++ .|+.-...+.......+.
T Consensus 19 g~v~a~d~~tG~~~W~~~~~----~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~ 89 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKED----PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLTKLPFTIPELVQASPCR 89 (369)
T ss_dssp SEEEEEETTTCCEEEEEECC----CSCCCC-----CCEEECTTT-----CCEEEC-----CCSEECSCCHHHHHTTCSCC
T ss_pred CEEEEEECCCCCEEEEecCC----CceecceEcCCCEEEEeCCC-----CEEEEEECCCCceeeeeeccCccccccCceE
Confidence 468899988876 765431 11223334467788876533 45888898665 355322211111111111
Q ss_pred EECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEE
Q psy9754 143 EINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTT 178 (306)
Q Consensus 143 ~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~ 178 (306)
..++.||+ |+. ...++.+|+++.+ |+.
T Consensus 90 ~~~~~v~~-g~~--------dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 90 SSDGILYM-GKK--------QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp -----CCC-CEE--------EEEEEEECCC--------
T ss_pred ecCCEEEE-EeC--------CCEEEEEECCCCcEEEEe
Confidence 14555554 321 2568899988765 654
No 216
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.62 E-value=4.2 Score=37.07 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=62.3
Q ss_pred eceEEEEeCCCCC--eeeCCCCCCC--------ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCc
Q psy9754 66 SNSVWSFNPNNKQ--WTQEPNMTYP--------RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLK 133 (306)
Q Consensus 66 ~~~~~~~d~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~ 133 (306)
...++.+|..+++ |+.-...+.. ......+..+++||+... ...++.+|..+++ |+.-..-+
T Consensus 75 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~~W~~~~~~~ 148 (668)
T 1kv9_A 75 WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRLIALDAKTGKAIWSQQTTDP 148 (668)
T ss_dssp GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEEEEEETTTCCEEEEEECSCT
T ss_pred CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEEEEEECCCCCEeeeeccCCC
Confidence 3568899988876 8765433211 112334556889988743 2568899998886 87543211
Q ss_pred c--cccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 134 I--ARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 134 ~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
. ......-++.++.+|+..+..... ....++.||+++.+ |+.-
T Consensus 149 ~~~~~~~~~P~v~~~~v~vg~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 149 AKPYSITGAPRVVKGKVIIGNGGAEYG---VRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TSSCBCCSCCEEETTEEEECCBCTTTC---CBCEEEEEETTTCCEEEEEE
T ss_pred CCcceecCCCEEECCEEEEeCCCCCcC---CCCEEEEEECCCCcEEEEec
Confidence 1 111223345688888743322111 14689999998776 8653
No 217
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.53 E-value=2.4 Score=34.16 Aligned_cols=61 Identities=15% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCE-EEEEccCCCCCCCceeEEEeC-CCCcEEeccC--CcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 98 LDK-IYAIGGQDCKTLLSSVECYDP-VAHTWEDVAP--LKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 98 ~~~-iyv~GG~~~~~~~~~~~~~d~-~~~~w~~~~~--~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
+++ .++.|+.+ ..+.+||. .+++...+.. ...... .++...+.+++.++.+ +.+..+|+.+
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~v~--~l~~~~~~~l~s~~~d--------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLGIC--RICKYGDDKLIAASWD--------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSCEE--EEEEETTTEEEEEETT--------SEEEEECHHH
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCceE--EEEeCCCCEEEEEcCC--------CeEEEEcccc
Confidence 566 66666644 45888999 8887665554 222222 2222224445555432 4677787664
No 218
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.72 E-value=5.4 Score=35.83 Aligned_cols=104 Identities=16% Similarity=0.264 Sum_probs=59.3
Q ss_pred ceEEEEeC-CCCC--eeeCCCCCCC--------ccceeeEE--ECCE----EEEEccCCCCCCCceeEEEeCCCCc--EE
Q psy9754 67 NSVWSFNP-NNKQ--WTQEPNMTYP--------RKIFSFVS--CLDK----IYAIGGQDCKTLLSSVECYDPVAHT--WE 127 (306)
Q Consensus 67 ~~~~~~d~-~t~~--W~~~~~~~~~--------~~~~~~~~--~~~~----iyv~GG~~~~~~~~~~~~~d~~~~~--w~ 127 (306)
..++.+|. .+++ |+.-...+.. ......+. .+++ ||+... ...++.+|..+++ |+
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------dg~l~AlDa~TG~~~W~ 146 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------DGNVAALNAETGETVWK 146 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------TSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------CCEEEEEECCCCCEEEe
Confidence 56888998 7875 8765433211 11223444 4666 887643 2568899998886 87
Q ss_pred ec-cCCccc-ccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 128 DV-APLKIA-RMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 128 ~~-~~~~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
.- ...... .....-++.++++|+-.+..... ....+..||.++.+ |+.-
T Consensus 147 ~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g---~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 147 VENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG---VRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EECCCGGGTCBCCSCCEEETTEEEECCBCGGGT---CCCEEEEEETTTCCEEEEEE
T ss_pred ecCCCCCccceeecCCEEECCEEEEEecccccC---CCCeEEEEECCCCcEEEEEc
Confidence 53 221111 11122345688887643221111 13689999998775 8654
No 219
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.70 E-value=4 Score=34.28 Aligned_cols=164 Identities=13% Similarity=0.092 Sum_probs=85.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
...++++++.....+.+........ ..++. .++.||+.... ...++++++....-+.+..-... .-..+++
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~-~P~giav 209 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLE-KPRAIAL 209 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCC-CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCS-CEEEEEE
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCc-cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCC-CCcEEEE
Confidence 3567888887665544422111111 22333 36899998542 25678888775543333211111 1123333
Q ss_pred E--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccc
Q psy9754 144 I--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 144 ~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
. ++.||+.--.. ...++++++....-+.+. ..+..| .+++.. .+++||+.....
T Consensus 210 dp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~~~~P---nGlavd~~~~~lY~aD~~~------------ 267 (386)
T 3v65_B 210 HPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAKH------------ 267 (386)
T ss_dssp ETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEECSSCSCE---EEEEEEGGGTEEEEEETTT------------
T ss_pred EcCCCeEEEeccCC-------CCEEEEEeCCCCCcEEEEECCCCCe---eeEEEeCCCCEEEEEECCC------------
Confidence 3 68899874211 267999998765443331 112222 233333 358999986432
Q ss_pred cceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeC
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGG 260 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG 260 (306)
..|+++|++...-..+..... ..-.++++.++.||+..-
T Consensus 268 -~~I~~~d~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 268 -HVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDW 306 (386)
T ss_dssp -TEEEEECTTSCSCEEEECSSC-SSEEEEEEETTEEEEEET
T ss_pred -CEEEEEeCCCCeeEEEEECCC-CCceEEEEECCEEEEeeC
Confidence 568888886433222221111 112355557888998864
No 220
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.54 E-value=2.6 Score=31.70 Aligned_cols=145 Identities=13% Similarity=0.095 Sum_probs=76.3
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCC--cE--Eec----cCCcccccceeeEE-ECCEEEEEcccCCCCCCCCC
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAH--TW--EDV----APLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVT 163 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~w--~~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 163 (306)
+++..++++|+|=| ..+|+++.... .. ..+ +.+|.. ..++... .++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-IDAa~~~~~~~~~yfFkG---------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG---------- 72 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET----------
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-ccEEEEECCCCeEEEEeC----------
Confidence 34557999999977 56777776542 21 112 223322 2222211 2688999976
Q ss_pred ccEEEEeCCCCee-EEcccccCCc----ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE----
Q psy9754 164 DKVECYDPRTNTW-TTLATKLRYP----RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK---- 234 (306)
Q Consensus 164 ~~~~~~d~~~~~W-~~~~~~~~~~----~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~---- 234 (306)
+..++|+..+..- ..+ .....| ...++. ...++++|+|-| ...++||..+.+=.
T Consensus 73 ~~yw~~~~~~~~~Pk~i-~~~G~p~~~~~iDAA~-~~~~g~~yfFkg---------------~~ywr~d~~~~~~~~gyP 135 (195)
T 1itv_A 73 RQVWVYTGASVLGPRRL-DKLGLGADVAQVTGAL-RSGRGKMLLFSG---------------RRLWRFDVKAQMVDPRSA 135 (195)
T ss_dssp TEEEEEETTEEEEEEEG-GGGTCCTTCCCCCEEE-ECSTTEEEEEET---------------TEEEEEETTTTEECGGGC
T ss_pred CEEEEEcCCccCCCEEe-eecccCCCccceeEEE-EcCCCeEEEEeC---------------CEEEEEeCCcccccCCCc
Confidence 4566776432111 112 111112 233333 344689999976 34688987654321
Q ss_pred -ecc-cCC-cccccceeeeeCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 235 -FVT-ELV-VPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 235 -~~~-~~p-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+. ..+ .+..-.++...++.+|++-|. ..|.||..+.+
T Consensus 136 r~i~~~w~Gvp~~idaa~~~~g~~Yffkg~---------~y~~~~~~~~~ 176 (195)
T 1itv_A 136 SEVDRMFPGVPLDTHDVFQFREKAYFCQDR---------FYWRVSSRSEL 176 (195)
T ss_dssp EEHHHHSTTSCSSCSEEEEETTEEEEEETT---------EEEEEECCTTC
T ss_pred cChhhcCCCCCCCCCEEEEeCCeEEEEeCC---------EEEEEECCccE
Confidence 111 111 112233444457999999774 46777776554
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.49 E-value=3.1 Score=32.55 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=92.5
Q ss_pred ceEEEEeCCCCCeeeCC---CCCCC-ccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccccccee
Q psy9754 67 NSVWSFNPNNKQWTQEP---NMTYP-RKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMA 140 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~---~~~~~-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~ 140 (306)
..++++++.....+.+. .+..+ ..-+.++.. ++.||+.... ...+.++++....-+.+.+... ..-+.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ 83 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEG 83 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccE
Confidence 46778887654432221 11112 112334433 5789998542 2578899987765333321111 12223
Q ss_pred eEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc-ccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCccc
Q psy9754 141 VAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT-KLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQK 216 (306)
Q Consensus 141 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~ 216 (306)
+++. ++.||+.... .+.+.+++++...-+.+.. ....| ..++... ++.||+......
T Consensus 84 ia~d~~~~~lyv~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~P---~~i~vd~~~g~lyv~~~~~~-------- 144 (267)
T 1npe_A 84 IALDHLGRTIFWTDSQ--------LDRIEVAKMDGTQRRVLFDTGLVNP---RGIVTDPVRGNLYWTDWNRD-------- 144 (267)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEETTTTEEEEEECCSS--------
T ss_pred EEEEecCCeEEEEECC--------CCEEEEEEcCCCCEEEEEECCCCCc---cEEEEeeCCCEEEEEECCCC--------
Confidence 4443 5799997531 3678899887544333311 11222 2333433 489999864311
Q ss_pred ccccceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 217 MYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
...+++++++...-+.+..... ..-.+++.- +++||+..... +.++++|++...
T Consensus 145 ---~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~-------~~I~~~~~~g~~ 200 (267)
T 1npe_A 145 ---NPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGT-------HRAECLNPAQPG 200 (267)
T ss_dssp ---SCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTEEE
T ss_pred ---CcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECCC-------CEEEEEecCCCc
Confidence 1467788876544333321111 112233333 46888886544 578888887543
No 222
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.46 E-value=3.3 Score=32.87 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCc-cceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPR-KIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w 126 (306)
+++..+|..+++-...-.+.... .-.+++.. +++.++.|+.+ ..+.++|..+++-
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKR 101 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCcee
Confidence 56889999998765543322221 22233333 56777777755 4577889888764
No 223
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=92.35 E-value=1.2 Score=35.96 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=52.6
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~~~~~~~~~~~~~ 144 (306)
..+++|| .+++-.-...++.. ...+.+.. ++.||+... . +++||+..+. |+... +... ....+..
T Consensus 40 ~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t~-------~-l~~~d~~g~~~~~~~~--~~~~-~~~~~~~ 106 (330)
T 3hxj_A 40 KNLYAIN-TDGSVKWFFKSGEI-IECRPSIGKDGTIYFGSD-------K-VYAINPDGTEKWRFDT--KKAI-VSDFTIF 106 (330)
T ss_dssp TTTEEEC-TTSCEEESSCGGGE-EEECCEETTTTEECCSSC-------E-EEEECCCGGGGGGSCC--------CCEEEE
T ss_pred CEEEEEC-CCCcEEEEEecCCC-cccceEEecCCcEEEecC-------c-EEEECCCCcEEEEEEC--CCCc-ccCceEE
Confidence 4578888 66652222222211 11233332 677777422 2 8889874332 43221 1111 1122334
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCC-CCeeEEcccccCCcceeEEEEEEeCCEEEEE
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPR-TNTWTTLATKLRYPRYLATLVSVNNEKLYII 203 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~ 203 (306)
++.||+... ...+++||++ ...|+.. ...+. ..+.+...++.||+.
T Consensus 107 ~~~l~v~t~---------~~~l~~~d~~g~~~~~~~-~~~~~---~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 107 EDILYVTSM---------DGHLYAINTDGTEKWRFK-TKKAI---YATPIVSEDGTIYVG 153 (330)
T ss_dssp TTEEEEECT---------TSEEEEECTTSCEEEEEE-CSSCC---CSCCEECTTSCEEEE
T ss_pred CCEEEEEec---------CCEEEEEcCCCCEEEEEc-CCCce---eeeeEEcCCCEEEEE
Confidence 888888532 2568899987 3346654 22111 112333434777764
No 224
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.34 E-value=3.9 Score=33.34 Aligned_cols=52 Identities=4% Similarity=0.086 Sum_probs=25.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAH 124 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~ 124 (306)
..+..+|..+++....-... ...-.+++.. +++.++.|+.+ ..+.++|....
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~ 150 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGH-QSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGE 150 (343)
T ss_dssp SEEEEEETTSSCEEEEEECC-CSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSC
T ss_pred CcEEEEECCCCcEEEEEcCC-CCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCC
Confidence 46778888876542211001 1111222222 55566666654 34666777643
No 225
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.27 E-value=3.8 Score=33.11 Aligned_cols=189 Identities=10% Similarity=0.001 Sum_probs=96.2
Q ss_pred ceEEEEeCCCCCeeeCCCCC------------------CCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT------------------YPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~------------------~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w 126 (306)
..+++||+.+++++...... ....-++++.. ++.|||.... ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 57888998877665432100 00112334444 5789998432 3378899887765
Q ss_pred EeccCCcc--c-ccceeeEE-E-CCEEEEEcccCCCCC---------CCCCccEEEEeCCCCeeEEcccccCCcceeEEE
Q psy9754 127 EDVAPLKI--A-RMGMAVAE-I-NDKIWIAGGYTGDKM---------NPVTDKVECYDPRTNTWTTLATKLRYPRYLATL 192 (306)
Q Consensus 127 ~~~~~~~~--~-~~~~~~~~-~-~~~iyv~GG~~~~~~---------~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~ 192 (306)
+.+..... . ..-..+++ - ++.||+......... ......+++||+.+.+.+.+...+..+. .+
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~---gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPG---GA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCC---EE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCc---ce
Confidence 55432211 1 11122333 2 578998753211000 0013679999998887665522222222 33
Q ss_pred EEEeCC-EEEEEcCCCCCCCCCcccccccceeeEEECCCC---ceEecccCCcccccceeeee-CCEEEEEeCccCcc--
Q psy9754 193 VSVNNE-KLYIIGGASQTDATNTQKMYSVSDLDVFVSNEK---EWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVY-- 265 (306)
Q Consensus 193 ~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~---~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~-- 265 (306)
+...++ .||+..... ..+++|++... +.+.+..++. -..++.- ++.||+........
T Consensus 191 a~~~dg~~lyv~d~~~-------------~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 191 EVSADSSFVLVAEFLS-------------HQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EECTTSSEEEEEEGGG-------------TEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSST
T ss_pred EECCCCCEEEEEeCCC-------------CeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccc
Confidence 344444 588764321 56888988742 3443333322 1223332 67888875431000
Q ss_pred -ccccceEEEeecccc
Q psy9754 266 -KRTLKSVECWCFDRQ 280 (306)
Q Consensus 266 -~~~~~~~~~yd~~~~ 280 (306)
......+.+||++..
T Consensus 255 ~~~~~~~v~~~d~~G~ 270 (322)
T 2fp8_A 255 HGRVDPKGIKFDEFGN 270 (322)
T ss_dssp TSCEEEEEEEECTTSC
T ss_pred cCCCccEEEEECCCCC
Confidence 001146888888644
No 226
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=92.18 E-value=3.2 Score=31.99 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe----cc-cCCc------ccccceeee--eCCEEEEEeCccC
Q psy9754 197 NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF----VT-ELVV------PRHAHSASV--LSSQILIIGGVTT 263 (306)
Q Consensus 197 ~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~----~~-~~p~------~~~~~~~~~--~~~~i~v~GG~~~ 263 (306)
++++|+|-| ...++||....+... +. .+|. +..-.++.. .++++|+|-|
T Consensus 127 ~gk~yfFkG---------------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--- 188 (225)
T 3oyo_A 127 GKEVYLFKG---------------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--- 188 (225)
T ss_dssp TTEEEEEET---------------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET---
T ss_pred CCcEEEEeC---------------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC---
Confidence 589999977 346888876655442 11 1222 222223333 3789999977
Q ss_pred ccccccceEEEeecc
Q psy9754 264 VYKRTLKSVECWCFD 278 (306)
Q Consensus 264 ~~~~~~~~~~~yd~~ 278 (306)
+..|.||..
T Consensus 189 ------~~ywr~d~~ 197 (225)
T 3oyo_A 189 ------QNYVRIDFT 197 (225)
T ss_dssp ------TEEEEEECC
T ss_pred ------CEEEEEeCC
Confidence 457888887
No 227
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.08 E-value=4.8 Score=33.78 Aligned_cols=174 Identities=10% Similarity=0.127 Sum_probs=92.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~- 143 (306)
..+.++++.......+.+ ....-.+++.. ++.||+..-. ...++++++.....+.+....... -.++++
T Consensus 96 ~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~-p~glavd 167 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLES-PGGLAVD 167 (386)
T ss_dssp SCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSC-CCCEEEE
T ss_pred ccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCC-ccEEEEE
Confidence 457777777665544432 11112333333 5789988432 267889999887765543221111 112333
Q ss_pred -ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCccccccc
Q psy9754 144 -INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 -~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
.++.||+.-.. .+.+.+++++...-+.+. ..+..|+ ++++. .++.||+..-.. .
T Consensus 168 ~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~~------------~ 224 (386)
T 3v65_B 168 WVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN------------T 224 (386)
T ss_dssp TTTTEEEEEETT--------TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECSS------------S
T ss_pred eCCCeEEEEcCC--------CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccCC------------C
Confidence 47899987531 357888887755433331 2222332 33333 258899875322 1
Q ss_pred ceeeEEECCCCceEecccCCcccccceeee--eCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASV--LSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
..+++++++...-+.+...... .-.++++ .+++||+.-... ..++++|++.
T Consensus 225 ~~I~r~~~dG~~~~~~~~~~~~-~PnGlavd~~~~~lY~aD~~~-------~~I~~~d~dG 277 (386)
T 3v65_B 225 PRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKH-------HVIERANLDG 277 (386)
T ss_dssp CEEEEEETTSCSCEEEECSSCS-CEEEEEEEGGGTEEEEEETTT-------TEEEEECTTS
T ss_pred CEEEEEeCCCCCcEEEEECCCC-CeeeEEEeCCCCEEEEEECCC-------CEEEEEeCCC
Confidence 5688888875443333211111 1123333 267888885433 4666776653
No 228
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.05 E-value=1.6 Score=37.40 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=77.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-E-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-I-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.||+..-. ..+.++|+.+++.+.+.. ...+ -..+++ . ++.||+........ ...+..++... .
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~~~----~~~v~~~~~~g-~ 215 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNNND----RPNNYILTRES-G 215 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSCTT----SEEEEEEEGGG-T
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCCcc----cceEEEEeCCC-c
Confidence 4789998432 678899999988877654 1111 122222 2 34589886433211 23456666442 2
Q ss_pred eE---EcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee
Q psy9754 176 WT---TLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL 251 (306)
Q Consensus 176 W~---~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~ 251 (306)
+. .+ .....| +.+++.. ++.||+..-.. ..+++|+++...-..+...+....-..++.-
T Consensus 216 ~~~~~~l-~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~ 278 (430)
T 3tc9_A 216 FKVITEL-TKGQNC---NGAETHPINGELYFNSWNA-------------GQVFRYDFTTQETTPLFTIQDSGWEFHIQFH 278 (430)
T ss_dssp SCSEEEE-EECSSC---CCEEECTTTCCEEEEETTT-------------TEEEEEETTTTEEEEEEECSSSSCCEEEEEC
T ss_pred eeeeeee-ccCCCc---eEEEEeCCCCEEEEEECCC-------------CEEEEEECCCCcEEEEEEcCCCCcceeEEEc
Confidence 32 33 222222 2334443 58899875432 5689999987665333333221111233333
Q ss_pred -CCE-EEEEeCccCccccccceEEEeecc
Q psy9754 252 -SSQ-ILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 252 -~~~-i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
+++ ||+..... ..+++++.+
T Consensus 279 pdG~~lyv~d~~~-------~~I~~~~~d 300 (430)
T 3tc9_A 279 PSGNYAYIVVVNQ-------HYILRSDYD 300 (430)
T ss_dssp TTSSEEEEEETTT-------TEEEEEEEE
T ss_pred CCCCEEEEEECCC-------CEEEEEeCC
Confidence 454 88886444 567777665
No 229
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.00 E-value=4.2 Score=32.97 Aligned_cols=105 Identities=10% Similarity=0.119 Sum_probs=56.1
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccc-eeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMG-MAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+.+++.|+.+ ..+.+||..+........+...... ..++.. ++.+++.|+.+ ..+..+|..+.+.
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD--------KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC--------CcEEEEEcCCCCc
Confidence 4777777754 4577788876332221111111111 122222 45555555433 5788999998876
Q ss_pred EEcccccCCcceeEEEEE--EeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 177 TTLATKLRYPRYLATLVS--VNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~--~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
..+ .....+- .++.. ..++.+++.++.. ..+.+||+.+.+
T Consensus 121 ~~~-~~~~~~v--~~~~~~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 121 IQI-AQHDAPV--KTIHWIKAPNYSCVMTGSWD-------------KTLKFWDTRSSN 162 (368)
T ss_dssp EEE-EECSSCE--EEEEEEECSSCEEEEEEETT-------------SEEEEECSSCSS
T ss_pred eee-ccccCce--EEEEEEeCCCCCEEEEccCC-------------CcEEEEECCCCc
Confidence 655 2222221 12222 3456777777654 568889887654
No 230
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.93 E-value=4.2 Score=32.80 Aligned_cols=134 Identities=10% Similarity=0.077 Sum_probs=65.0
Q ss_pred ceEEEEeCCCCCeee-CCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE
Q psy9754 67 NSVWSFNPNNKQWTQ-EPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI 144 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~-~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~ 144 (306)
..+..+|..+++-.. +.. ... .-.++... ++.+++.|+.+ ..+.++|.....-..+....... ..+...
T Consensus 87 ~~v~~wd~~~~~~~~~~~~-h~~-~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~~~~h~~~v--~~~~~~ 157 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVG-HKS-DVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLATLLGHNDWV--SQVRVV 157 (319)
T ss_dssp SEEEEEETTTTEEEEEEEC-CSS-CEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEEECCCSSCE--EEEEEC
T ss_pred CEEEEEECCCCCeeEEEcc-CCC-cEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEEEeccCCcE--EEEEEc
Confidence 567888988875321 111 111 11122222 55667777755 34667787655433332111111 111111
Q ss_pred -------CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccc
Q psy9754 145 -------NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 145 -------~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~ 217 (306)
++.+++.|+.+ ..+..+|+.+.+-........ ..-.+++...++++++.|+..
T Consensus 158 ~~~~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~~~d---------- 217 (319)
T 3frx_A 158 PNEKADDDSVTIISAGND--------KMVKAWNLNQFQIEADFIGHN--SNINTLTASPDGTLIASAGKD---------- 217 (319)
T ss_dssp CC------CCEEEEEETT--------SCEEEEETTTTEEEEEECCCC--SCEEEEEECTTSSEEEEEETT----------
T ss_pred cCCCCCCCccEEEEEeCC--------CEEEEEECCcchhheeecCCC--CcEEEEEEcCCCCEEEEEeCC----------
Confidence 22344555433 467888887765433211111 111233344457777777654
Q ss_pred cccceeeEEECCCCc
Q psy9754 218 YSVSDLDVFVSNEKE 232 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~ 232 (306)
..+.+||+.+.+
T Consensus 218 ---g~i~iwd~~~~~ 229 (319)
T 3frx_A 218 ---GEIMLWNLAAKK 229 (319)
T ss_dssp ---CEEEEEETTTTE
T ss_pred ---CeEEEEECCCCc
Confidence 567889887654
No 231
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.71 E-value=5.5 Score=35.28 Aligned_cols=139 Identities=9% Similarity=0.009 Sum_probs=70.7
Q ss_pred ceEEEEeC--CCCCeeeCCCCCCCccceeeEEEC-CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 67 NSVWSFNP--NNKQWTQEPNMTYPRKIFSFVSCL-DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 67 ~~~~~~d~--~t~~W~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
..+|..+. .... ..+...+..+ .....-+ +.++++.+... ...+||..+++.+++...+. ......
T Consensus 90 ~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~~---~~~~~s 158 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATED-----RVALYALDGGGLRELARLPG---FGFVSD 158 (582)
T ss_dssp EEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECSS-----CEEEEEEETTEEEEEEEESS---CEEEEE
T ss_pred eEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCCC-----CceEEEccCCcEEEeecCCC---ceEEEC
Confidence 46777877 3322 2333322222 2233334 34555544322 23377888887766654332 222223
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
-+++..+++...... ...++.+|+.+...+.+ ..... .........+++.++.+.... ...+
T Consensus 159 pDG~~la~~~~~~~~----~~~i~~~d~~~g~~~~l-~~~~~--~~~~~~~SpDG~~l~~~~~~~-----------~~~i 220 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG----RVSLFTSNLSSGGLRVF-DSGEG--SFSSASISPGMKVTAGLETAR-----------EARL 220 (582)
T ss_dssp EETTEEEEEEEEETT----EEEEEEEETTTCCCEEE-CCSSC--EEEEEEECTTSCEEEEEECSS-----------CEEE
T ss_pred CCCCEEEEEEEcCCC----CeEEEEEcCCCCCceEe-ecCCC--ccccceECCCCCEEEEccCCC-----------eeEE
Confidence 355544444332221 24699999999988877 32221 112333344566554322211 1478
Q ss_pred eEEECCCCceE
Q psy9754 224 DVFVSNEKEWK 234 (306)
Q Consensus 224 ~~y~~~~~~W~ 234 (306)
+++|+++.+..
T Consensus 221 ~~~d~~~~~~~ 231 (582)
T 3o4h_A 221 VTVDPRDGSVE 231 (582)
T ss_dssp EEECTTTCCEE
T ss_pred EEEcCCCCcEE
Confidence 89999888766
No 232
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.67 E-value=6 Score=34.12 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=37.8
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEec--cCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDV--APLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~--~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++++|+|-| +..|.||..+++.... +.++ . --++...++++|+|-| +..++||..+.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678999987 6689999988765432 2222 2 2244445789999987 45566766554
No 233
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.49 E-value=8.1 Score=35.24 Aligned_cols=190 Identities=9% Similarity=-0.006 Sum_probs=95.7
Q ss_pred eceEEEEeCCCCCee--eCCCCCC--CccceeeEEE-CCE-EEEEccCCCCCCCceeEEEeCCCC--cEEeccCCccccc
Q psy9754 66 SNSVWSFNPNNKQWT--QEPNMTY--PRKIFSFVSC-LDK-IYAIGGQDCKTLLSSVECYDPVAH--TWEDVAPLKIARM 137 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~--~~~~~~~--~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~d~~~~--~w~~~~~~~~~~~ 137 (306)
...+++++..+.+=+ .+...+. +....++... +++ |++...... ..+.++.+|..+. .++.+..-.....
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 456788877665431 1222222 2222233333 454 444332221 2368899998766 6777654332222
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCC---eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCc
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTN---TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNT 214 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~ 214 (306)
. .....+++||+....... ...+...|+.+. .|+.+.+... . .. .. ....+.|++..-...
T Consensus 285 ~-~~~~~g~~l~~~t~~~~~-----~~~l~~~d~~~~~~~~~~~l~~~~~-~-~~-~~-s~~g~~lv~~~~~~g------ 348 (693)
T 3iuj_A 285 S-LVDNKGSTLYLLTNRDAP-----NRRLVTVDAANPGPAHWRDLIPERQ-Q-VL-TV-HSGSGYLFAEYMVDA------ 348 (693)
T ss_dssp E-EEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEEECCCS-S-CE-EE-EEETTEEEEEEEETT------
T ss_pred E-EEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCccccEEEecCCC-C-EE-EE-EEECCEEEEEEEECC------
Confidence 2 234457899988754322 357899998764 3887633222 2 11 33 333367665532211
Q ss_pred ccccccceeeEEECCCCceEecccCCcccccceeee-eC-CEEEEEe-CccCccccccceEEEeeccccceec
Q psy9754 215 QKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LS-SQILIIG-GVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~-~~i~v~G-G~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
...+++++++......+. +|.......... .+ +.+++.. +... -..++.||+++++.+.
T Consensus 349 -----~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~t-----P~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 349 -----TARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQ-----PPTLYRFEPKSGAISL 410 (693)
T ss_dssp -----EEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSS-----CCEEEEECTTTCCEEE
T ss_pred -----eeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecCCCC-----CCEEEEEECCCCeEEE
Confidence 256888988755444443 332211111111 13 3444432 2222 2578999988877655
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.41 E-value=5.3 Score=33.00 Aligned_cols=154 Identities=8% Similarity=0.008 Sum_probs=77.1
Q ss_pred CCEEEEE-ccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAI-GGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~-GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++++.++ +|... ..+.++|+.+.+.......... -..++. -++++++.++ .+.+.+++..+..
T Consensus 144 Dg~~la~as~~~d----~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s---------~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 144 EGTVAAIASSKVP----AIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYIT---------GSSLEVISTVTGS 208 (365)
T ss_dssp TSSCEEEEESCSS----CEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEEC---------SSCEEEEETTTCC
T ss_pred CCCEEEEEECCCC----CEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEecc---------ceeEEEEEeccCc
Confidence 5655544 44222 5677899988775433221111 112222 2555555543 2456677777665
Q ss_pred eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecc--cCCcccccceeee--e
Q psy9754 176 WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT--ELVVPRHAHSASV--L 251 (306)
Q Consensus 176 W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~--~~p~~~~~~~~~~--~ 251 (306)
.............-.++....++..++.++..... ...+..++.......... .+........++. -
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc---------eeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 43321111111122233444567877776543321 134566766555544322 1111111112222 2
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++++++.|+.+ ..+.+||.++.+-
T Consensus 280 dg~~lasgs~D-------~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 280 KGELAVLASND-------NSIALVKLKDLSM 303 (365)
T ss_dssp TSCEEEEEETT-------SCEEEEETTTTEE
T ss_pred CCCceEEEcCC-------CEEEEEECCCCcE
Confidence 88888888877 5788999987653
No 235
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.18 E-value=5.6 Score=32.81 Aligned_cols=165 Identities=12% Similarity=0.063 Sum_probs=87.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC--Ccccccceee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP--LKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~--~~~~~~~~~~ 141 (306)
...++++++....-+.+........ .+++. .++.||+.... ...++++++....-+.+.. +..+ ..+
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~i 164 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAI 164 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEE
T ss_pred CCceEEEecCCCCceEEEeCCCCCc-cEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceE
Confidence 3567888887665444322111111 22333 36899998542 2578888887655333321 2112 233
Q ss_pred EEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCccccc
Q psy9754 142 AEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 142 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
++. ++.||+..-.. ...++++++....-+.+ ...... .-.+++.. .+++||+.....
T Consensus 165 avdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~-~~~~~~-~PnGla~d~~~~~lY~aD~~~----------- 224 (349)
T 3v64_C 165 ALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRII-ADTHLF-WPNGLTIDYAGRRMYWVDAKH----------- 224 (349)
T ss_dssp EEETTTTEEEEEECSS-------SCEEEEEETTSCSCEES-CCSSCS-CEEEEEEETTTTEEEEEETTT-----------
T ss_pred EEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEE-EECCCC-CcceEEEeCCCCEEEEEECCC-----------
Confidence 333 68899874211 26799999876544444 211111 11233333 358999986432
Q ss_pred ccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCcc
Q psy9754 219 SVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVT 262 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~ 262 (306)
..++++|++...-..+..... ..-.++++.++.||+..-..
T Consensus 225 --~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~~~ 265 (349)
T 3v64_C 225 --HVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDWHT 265 (349)
T ss_dssp --TEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEETTT
T ss_pred --CEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEecCCC
Confidence 568889887543232222111 11234555688899886443
No 236
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.04 E-value=9 Score=34.96 Aligned_cols=191 Identities=8% Similarity=-0.037 Sum_probs=96.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCC-----------CCCceeEEEeCCCCcEE--eccCC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCK-----------TLLSSVECYDPVAHTWE--DVAPL 132 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~-----------~~~~~~~~~d~~~~~w~--~~~~~ 132 (306)
..++.+|..+++...... +... ...++-. +++.++++..... .....+++++..+.+.+ .+-..
T Consensus 151 ~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 379999999988755311 1111 1223333 5543333332221 22456888898877632 12111
Q ss_pred c-ccccceeeE-EECC-EEEEEcccCCCCCCCCCccEEEEeCCC------C--eeEEcccccCCcceeEEEEEEeCCEEE
Q psy9754 133 K-IARMGMAVA-EIND-KIWIAGGYTGDKMNPVTDKVECYDPRT------N--TWTTLATKLRYPRYLATLVSVNNEKLY 201 (306)
Q Consensus 133 ~-~~~~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~~iy 201 (306)
+ ......... .-++ .|++........ .+.++.+|..+ . .+..+ ........ ..+....+.||
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~----~~~l~~~d~~~~~~~~~~~~~~~~l-~~~~~~~~--~~~s~dg~~l~ 301 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDP----VNRLWYCDLQQESNGITGILKWVKL-IDNFEGEY--DYVTNEGTVFT 301 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSS----CCEEEEEEGGGSSSSSCSSCCCEEE-ECSSSSCE--EEEEEETTEEE
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCC----ccEEEEEECcccccccCCccceEEe-eCCCCcEE--EEEeccCCEEE
Confidence 1 111111222 2244 444443322111 36789999876 3 57777 32222222 22333447788
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCC---ceEecccCCcccccceeeee-CCEEEEEeCccCccccccceEEEeec
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEK---EWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCF 277 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~---~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~ 277 (306)
+.+.... ....++.+|+++. .|+.+..-........+... ++.+++....+. ...++++|+
T Consensus 302 ~~s~~~~----------~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g-----~~~l~~~~~ 366 (710)
T 2xdw_A 302 FKTNRHS----------PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV-----KNTLQLHDL 366 (710)
T ss_dssp EEECTTC----------TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT-----EEEEEEEET
T ss_pred EEECCCC----------CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC-----EEEEEEEEC
Confidence 8765421 1257889998765 47766532221122234444 677777765443 256888998
Q ss_pred cccc
Q psy9754 278 DRQA 281 (306)
Q Consensus 278 ~~~~ 281 (306)
.+++
T Consensus 367 ~~g~ 370 (710)
T 2xdw_A 367 ATGA 370 (710)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 5544
No 237
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=90.86 E-value=8.5 Score=35.49 Aligned_cols=133 Identities=11% Similarity=0.118 Sum_probs=64.8
Q ss_pred CCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEE--eCCE
Q psy9754 122 VAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSV--NNEK 199 (306)
Q Consensus 122 ~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~ 199 (306)
..++|+.+..++....-......++.+|+.+. ..+++-.-.-.+|+.+ .....+.....+... .++.
T Consensus 554 ~G~tW~~~~~~~~~~~i~~~~~~~~~~~a~~~----------g~v~~S~DgG~tW~~~-~~~~~p~~~~~i~~~~~~~g~ 622 (737)
T 2cn3_A 554 NGNSWKVCTNLGMGAVVASDRVNGKKFYAFYN----------GKFYISTDGGLTFTDT-KAPQLPKSVNKIKAVPGKEGH 622 (737)
T ss_dssp TTSSCEECBTCCTTCEEEECSSCTTCEEEEET----------TEEEEESSTTSBCEEC-CCSSCCSCCSEEEEETTEEEE
T ss_pred CCCCCccCCCCCCCceEEEEecCCCEEEEecC----------CEEEEECCCCcCcccc-cCCCCCCccceEEEEeCCCCE
Confidence 45679998755433110000112456776641 3344444345679987 322222111223232 2367
Q ss_pred EEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeee--eC---CEEEEEeCccCccccccceEEE
Q psy9754 200 LYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV--LS---SQILIIGGVTTVYKRTLKSVEC 274 (306)
Q Consensus 200 iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~--~~---~~i~v~GG~~~~~~~~~~~~~~ 274 (306)
+|+.+.. ..+++-+=.-.+|+++..++.. ....... .+ ..||++|..... ..+++
T Consensus 623 l~~~~~~--------------g~l~~S~D~G~tW~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~g~~-----~gl~~ 682 (737)
T 2cn3_A 623 VWLAARE--------------GGLWRSTDGGYTFEKLSNVDTA-HVVGFGKAAPGQDYMAIYITGKIDNV-----LGFFR 682 (737)
T ss_dssp EEEECBT--------------TCEEEESSTTSSCEECTTCSEE-EEEEEECCCTTCSSCEEEEEEEETTE-----EEEEE
T ss_pred EEEEeCC--------------CcEEEEeCCCcccEECcCCCcc-ceEEEeecCCCCCCcEEEEEEecCCc-----ceEEE
Confidence 8887642 2234433334789999754332 1111111 12 268888643211 23555
Q ss_pred eeccccceecc
Q psy9754 275 WCFDRQAWIKG 285 (306)
Q Consensus 275 yd~~~~~W~~~ 285 (306)
-+-...+|+.+
T Consensus 683 S~D~G~tW~~~ 693 (737)
T 2cn3_A 683 SDDAGKTWVRI 693 (737)
T ss_dssp ESSTTSSCEEC
T ss_pred eCCCCCCCEec
Confidence 55567789884
No 238
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.78 E-value=4.4 Score=37.18 Aligned_cols=174 Identities=12% Similarity=0.081 Sum_probs=84.3
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCC----cEEeccCCcccccceee
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAH----TWEDVAPLKIARMGMAV 141 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~----~w~~~~~~~~~~~~~~~ 141 (306)
.+.++++.+.....+... ...-++++.. ++.||+.--. ...+.++++... .-..+-.... ..-.++
T Consensus 387 ~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~gl 458 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDI-QAPDGL 458 (699)
T ss_dssp C-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCCSCC---CCCE
T ss_pred ceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEeCCC-CCcceE
Confidence 567777777666544321 1222333333 5789988432 246778887751 1111111001 111122
Q ss_pred EE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc-ccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcccc
Q psy9754 142 AE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT-KLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 142 ~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~ 217 (306)
++ .++.||+.-.. .+.|.++++....-+.+.. .+..|+. +++. .++.||+..-..
T Consensus 459 avD~~~g~LY~tD~~--------~~~I~v~d~dg~~~~~l~~~~~~~P~g---iavDp~~g~ly~td~~~---------- 517 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFREQGSKPRA---IVVDPVHGFMYWTDWGT---------- 517 (699)
T ss_dssp ECCCSSSBCEECCTT--------TSCEEEEBSSSCCEEEECCCSSCCCCC---EECCSSSSCCEECCCSS----------
T ss_pred EEEeeCCcEEEEecc--------CCeEEEEecCCCceEEEEeCCCCCcce---EEEccCCCcEEEcccCC----------
Confidence 22 46788885321 3678999988765444422 2233332 2222 137888764211
Q ss_pred cccceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 218 YSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
...|++++++...-+.+..... ..-.++++- +++||+.-... ..|++++++..
T Consensus 518 --~~~I~~~~~dG~~~~~l~~~~l-~~PnGlavd~~~~~LY~aD~~~-------~~I~~~d~dG~ 572 (699)
T 1n7d_A 518 --PAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKL-------HSISSIDVNGG 572 (699)
T ss_dssp --SCCEEBCCSSSCCCCEESCSSC-SSCCCEEECTTTCCEEEEETTT-------TEEEEECSSSS
T ss_pred --CCeEEEEeCCCCCeeEEEeCCC-CCccEEEEeccCCEEEEEecCC-------CeEEEEccCCC
Confidence 1356677665433222221111 111233332 57888886543 56778887643
No 239
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.03 E-value=7.2 Score=32.19 Aligned_cols=179 Identities=9% Similarity=0.002 Sum_probs=89.4
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc--cccceeeEE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI--ARMGMAVAE 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~--~~~~~~~~~ 143 (306)
..+..+|+++.+-..... ....-..++.. ++++++.++. ..+.+++..++.......... .........
T Consensus 157 ~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp CEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccc------eeEEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 356777877765432211 11112223333 5666666542 345667777666433222111 111122223
Q ss_pred ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCC-cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccc
Q psy9754 144 INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRY-PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVS 221 (306)
Q Consensus 144 ~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~-~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~ 221 (306)
-++..++.++..... ...+..+|.......... ..... ...-.+++.-.++++++.|+.. .
T Consensus 229 pdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-------------~ 291 (365)
T 4h5i_A 229 ADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-------------N 291 (365)
T ss_dssp ETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-------------S
T ss_pred CCCCEEEEEecCCcc----eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-------------C
Confidence 467777776654332 235666776666554321 11111 1111233334468888887764 5
Q ss_pred eeeEEECCCCceEecccCCcc-cccceeeee--CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 222 DLDVFVSNEKEWKFVTELVVP-RHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 222 ~~~~y~~~~~~W~~~~~~p~~-~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+.+||..+.+- +..+... .....++.+ ++++++.|+.+ +.+.+||+..
T Consensus 292 ~V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D-------~tvrvw~ip~ 343 (365)
T 4h5i_A 292 SIALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAA-------NTIHIIKLPL 343 (365)
T ss_dssp CEEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETT-------SEEEEEECCT
T ss_pred EEEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCC-------CeEEEEEcCC
Confidence 688999876542 2222111 111122222 78888888777 5788888743
No 240
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.98 E-value=6.3 Score=31.47 Aligned_cols=159 Identities=7% Similarity=0.018 Sum_probs=74.8
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT 177 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 177 (306)
+.||+.+-.. ..++++++ +++.+..... ... ..+.+. -++++|++... ...+.+||++ .+.+
T Consensus 57 ~~l~~~d~~~-----~~i~~~~~-~g~~~~~~~~-~~~-~~gl~~d~dG~l~v~~~~--------~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 57 RTLVWSDLVG-----RRVLGWRE-DGTVDVLLDA-TAF-TNGNAVDAQQRLVHCEHG--------RRAITRSDAD-GQAH 119 (305)
T ss_dssp TEEEEEETTT-----TEEEEEET-TSCEEEEEES-CSC-EEEEEECTTSCEEEEETT--------TTEEEEECTT-SCEE
T ss_pred CEEEEEECCC-----CEEEEEeC-CCCEEEEeCC-CCc-cceeeECCCCCEEEEECC--------CCEEEEECCC-CCEE
Confidence 4577775432 45788888 4444433221 111 112222 25788876421 2568889886 6666
Q ss_pred EcccccCCcc--eeEEEEEEeCCEEEEE----cCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee
Q psy9754 178 TLATKLRYPR--YLATLVSVNNEKLYII----GGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL 251 (306)
Q Consensus 178 ~~~~~~~~~~--~~~~~~~~~~~~iyi~----GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~ 251 (306)
.+.......+ .-..++...++.||+. |-.................+++||+++.+.+.+..+ . .-.+++.-
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~s 196 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADL--D-HPNGLAFS 196 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEE--S-SEEEEEEC
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecC--C-CCcceEEc
Confidence 5522111111 1123445556899986 221100000000001125689999988887765411 1 11223333
Q ss_pred -CC-EEEEEeCccCccccccceEEEeeccc
Q psy9754 252 -SS-QILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 252 -~~-~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
++ .||+....... .....+++|++..
T Consensus 197 pdg~~lyv~~~~~~~--~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQG--HGSVEITAFAWRD 224 (305)
T ss_dssp TTSSEEEEEECCC-----CCCEEEEEEEET
T ss_pred CCCCEEEEEecCCcC--CCCCEEEEEEecC
Confidence 44 47776543210 0114677777654
No 241
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.95 E-value=8.8 Score=33.04 Aligned_cols=147 Identities=7% Similarity=0.032 Sum_probs=73.6
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEe--c----cCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCcc
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWED--V----APLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDK 165 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~--~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 165 (306)
+++..++++|+|-| ..+|+++.....+.. + +.+|.. ..++... .++++|+|=| +.
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iDAa~~~~~~g~~~fFKg----------~~ 328 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LEAAYEFADRDEVRFFKG----------NK 328 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CCEEEEEGGGTEEEEEET----------TE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-eeEEEEEcCCCeEEEEeC----------CE
Confidence 34557999999977 445666554332211 1 122221 1222111 3689999865 45
Q ss_pred EEEEeCCCCe--e-EEcc--cccC-Cc-ceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE---
Q psy9754 166 VECYDPRTNT--W-TTLA--TKLR-YP-RYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK--- 234 (306)
Q Consensus 166 ~~~~d~~~~~--W-~~~~--~~~~-~~-~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~--- 234 (306)
+++|+..+.. + ..+. ...| .+ ... +++... ++++|+|-| ...|+||....+-.
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g~P~~~~~ID-AA~~~~~~~k~yfFkG---------------~~yw~yd~~~~~~~~gY 392 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFGFPRTVKHID-AALSEENTGKTYFFVA---------------NKYWRYDEYKRSMDPGY 392 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHCCCTTCCCCC-EEEEETTTTEEEEEET---------------TEEEEEETTTTEECSSC
T ss_pred EEEecCCcccCCCceeeehhhcCCCCCCccc-eEEEEcCCCeEEEEeC---------------CEEEEEeCCCccccCCC
Confidence 6666532210 1 1110 0111 11 232 333333 589999977 45688887543321
Q ss_pred --ecc-cCC-cccccceeeeeCCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 235 --FVT-ELV-VPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 235 --~~~-~~p-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
.+. .+| .+..-.++...++++|+|-| +..|.||..+.+=
T Consensus 393 Pk~I~~~fpgip~~iDAA~~~~g~~YFFkg---------~~ywr~d~~~~~v 435 (450)
T 1su3_A 393 PKMIAHDFPGIGHKVDAVFMKDGFFYFFHG---------TRQYKFDPKTKRI 435 (450)
T ss_dssp SEEHHHHSTTSCSCCSEEEEETTEEEEEET---------TEEEEEETTTTEE
T ss_pred CcchhhcCCCCCCCccEEEEcCCeEEEEeC---------CEEEEEECCcceE
Confidence 111 111 11222334445899999976 3467777766543
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.90 E-value=6.4 Score=31.44 Aligned_cols=147 Identities=10% Similarity=0.032 Sum_probs=73.1
Q ss_pred ceEEEEeCCCCCeeeCCCCCCC----ccceeeEEECCEEEEE----ccCCC--------CCCCceeEEEeCCCCcEEecc
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYP----RKIFSFVSCLDKIYAI----GGQDC--------KTLLSSVECYDPVAHTWEDVA 130 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~----~~~~~~~~~~~~iyv~----GG~~~--------~~~~~~~~~~d~~~~~w~~~~ 130 (306)
..+.+|++. ++.+.+...... +....++.-++.||+. |-... ......++++|+.+++.+.+.
T Consensus 107 ~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 107 RAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp TEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 468888875 666554322111 1112222237889986 32111 012357899999888877654
Q ss_pred CCcccccceeeEEE-CC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc--cccCCcceeEEEEEEeCCEEEEEcCC
Q psy9754 131 PLKIARMGMAVAEI-ND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA--TKLRYPRYLATLVSVNNEKLYIIGGA 206 (306)
Q Consensus 131 ~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~~~~~~~iyi~GG~ 206 (306)
.... ....+.. ++ .||+......... .+.+++||.......... .... ...-.+++...++.||+..+
T Consensus 186 --~~~~-p~gl~~spdg~~lyv~~~~~~~~~---~~~i~~~~~~~~~l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~~- 257 (305)
T 3dr2_A 186 --DLDH-PNGLAFSPDEQTLYVSQTPEQGHG---SVEITAFAWRDGALHDRRHFASVP-DGLPDGFCVDRGGWLWSSSG- 257 (305)
T ss_dssp --EESS-EEEEEECTTSSEEEEEECCC---C---CCEEEEEEEETTEEEEEEEEECCS-SSCCCSEEECTTSCEEECCS-
T ss_pred --cCCC-CcceEEcCCCCEEEEEecCCcCCC---CCEEEEEEecCCCccCCeEEEECC-CCCCCeEEECCCCCEEEecC-
Confidence 1111 1223332 33 5887753211111 257889988765432110 1111 11111234444678887542
Q ss_pred CCCCCCCcccccccceeeEEECCCCceEec
Q psy9754 207 SQTDATNTQKMYSVSDLDVFVSNEKEWKFV 236 (306)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~ 236 (306)
..+.+|+++......+
T Consensus 258 --------------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 258 --------------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp --------------SEEEEECTTSCEEEEE
T ss_pred --------------CcEEEECCCCCEEEEE
Confidence 3478999865544444
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=89.72 E-value=5.1 Score=33.89 Aligned_cols=63 Identities=19% Similarity=0.181 Sum_probs=33.6
Q ss_pred CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc-eEecccCCcccccc-eeeee-CC-EEEEEeCccCccccccceE
Q psy9754 197 NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE-WKFVTELVVPRHAH-SASVL-SS-QILIIGGVTTVYKRTLKSV 272 (306)
Q Consensus 197 ~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~-W~~~~~~p~~~~~~-~~~~~-~~-~i~v~GG~~~~~~~~~~~~ 272 (306)
++.+++.++.. ..+.+||+.+.. ...+..+....... +++.. ++ .+++.|+.+ ..+
T Consensus 243 ~~~~l~s~~~d-------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-------g~v 302 (430)
T 2xyi_A 243 HESLFGSVADD-------------QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-------KTV 302 (430)
T ss_dssp CTTEEEEEETT-------------SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-------SEE
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-------CeE
Confidence 35676666543 568899987652 11111111111111 22222 34 478888776 468
Q ss_pred EEeeccc
Q psy9754 273 ECWCFDR 279 (306)
Q Consensus 273 ~~yd~~~ 279 (306)
.+||+.+
T Consensus 303 ~vwd~~~ 309 (430)
T 2xyi_A 303 ALWDLRN 309 (430)
T ss_dssp EEEETTC
T ss_pred EEEeCCC
Confidence 8888765
No 244
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.67 E-value=7.1 Score=31.57 Aligned_cols=194 Identities=9% Similarity=0.010 Sum_probs=92.8
Q ss_pred eeceEEEEeCCCCCeeeCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeE
Q psy9754 65 VSNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVA 142 (306)
Q Consensus 65 ~~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 142 (306)
....++.+|..+++-..+ ......... ++ .|+.... ........++++|..+++..++...+. .....
T Consensus 41 ~~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~-~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRA-NEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEE-ETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred ccceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEe-ccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 467899999988776555 111222223 44 4444332 111123568889998888766654332 11222
Q ss_pred EE-CC-EEEEEcccCCC---------------C---CCCCCccEEEEeCCCCee-EEcccccCCcceeEEEEEEeCCEEE
Q psy9754 143 EI-ND-KIWIAGGYTGD---------------K---MNPVTDKVECYDPRTNTW-TTLATKLRYPRYLATLVSVNNEKLY 201 (306)
Q Consensus 143 ~~-~~-~iyv~GG~~~~---------------~---~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~iy 201 (306)
.. ++ .|++....... . .......++.+|+.+.+. ..+ .. + .........++ ++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l-~~-~---~~~~~~~spdg-~~ 184 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF-EK-P---RFSSGIWHRDK-IV 184 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE-EE-E---TTCEEEEETTE-EE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee-cC-C---CcccccCCCCe-EE
Confidence 22 44 45554321000 0 000025789999998887 666 33 2 11233334445 65
Q ss_pred EEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccCc-cccccceEEEeecccc
Q psy9754 202 IIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTTV-YKRTLKSVECWCFDRQ 280 (306)
Q Consensus 202 i~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~~~yd~~~~ 280 (306)
+.+........ ......++.+| +.+++.+..- .......-+++.+++.+.... .......++++| ++
T Consensus 185 ~~~~~~~~~~~----~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 185 VNVPHREIIPQ----YFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp EEEECCCSSCC----SSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred EEEeccccccc----ccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 55533211000 00025678888 6666655431 111122446654444332211 111235788888 56
Q ss_pred ceeccC
Q psy9754 281 AWIKGV 286 (306)
Q Consensus 281 ~W~~~~ 286 (306)
++..+.
T Consensus 253 ~~~~l~ 258 (347)
T 2gop_A 253 EVMGIL 258 (347)
T ss_dssp CEEESS
T ss_pred ceEecc
Confidence 666643
No 245
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=89.37 E-value=16 Score=35.16 Aligned_cols=146 Identities=9% Similarity=-0.007 Sum_probs=77.4
Q ss_pred ceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEE-EEeCCCCeeEEcccccCCcceeEEE
Q psy9754 114 SSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVE-CYDPRTNTWTTLATKLRYPRYLATL 192 (306)
Q Consensus 114 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~-~~d~~~~~W~~~~~~~~~~~~~~~~ 192 (306)
..++.++..+.....+...+..+....... +++.+++... ...++ .+|..+..-..+ .. ........
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~--------~~~l~~~~d~~~~~~~~l-~~--~~~~~~~~ 384 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR--------EGDFLGIYDYRTGKAEKF-EE--NLGNVFAM 384 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET--------TEEEEEEEETTTCCEEEC-CC--CCCSEEEE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC--------CCceEEEEECCCCCceEe-cC--Cccceeee
Confidence 467778887776655543332122222223 5544444332 14678 889888877666 31 11122233
Q ss_pred EEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeCccC--c-ccccc
Q psy9754 193 VSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGGVTT--V-YKRTL 269 (306)
Q Consensus 193 ~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~--~-~~~~~ 269 (306)
....+++.++++... ..++++|+.+.+-..+..-...........-+++.+++++... . .....
T Consensus 385 ~~SpDG~~la~~~~~-------------~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 385 GVDRNGKFAVVANDR-------------FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp EECTTSSEEEEEETT-------------SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred EECCCCCEEEEECCC-------------CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 344456666665432 4689999988876655422222111122223777666654431 0 00122
Q ss_pred ceEEEeeccccceec
Q psy9754 270 KSVECWCFDRQAWIK 284 (306)
Q Consensus 270 ~~~~~yd~~~~~W~~ 284 (306)
..+++||+++++...
T Consensus 452 ~~i~l~d~~~g~~~~ 466 (1045)
T 1k32_A 452 QAIHVYDMEGRKIFA 466 (1045)
T ss_dssp EEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCcEEE
Confidence 589999998877555
No 246
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.31 E-value=12 Score=33.52 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=47.9
Q ss_pred eeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccc------cceeeEEECCEEEEEcccCCCCCCCCC
Q psy9754 92 FSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIAR------MGMAVAEINDKIWIAGGYTGDKMNPVT 163 (306)
Q Consensus 92 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~------~~~~~~~~~~~iyv~GG~~~~~~~~~~ 163 (306)
.+.+..++.||+.... ..++.+|..+++ |+.-...+... ...+.++.+++||+... .
T Consensus 62 ~~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------d 126 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------D 126 (582)
T ss_dssp CCCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------T
T ss_pred eccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------C
Confidence 3445679999998653 238899998776 87644332211 11234567899988532 2
Q ss_pred ccEEEEeCCCCe--eEEc
Q psy9754 164 DKVECYDPRTNT--WTTL 179 (306)
Q Consensus 164 ~~~~~~d~~~~~--W~~~ 179 (306)
..++.+|.++.+ |+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEESSSCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeec
Confidence 579999988775 8754
No 247
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=89.20 E-value=4.2 Score=31.34 Aligned_cols=60 Identities=7% Similarity=0.059 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE-----ecc-cCCcc------cccceeee--eCCEEEEEeCcc
Q psy9754 197 NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK-----FVT-ELVVP------RHAHSASV--LSSQILIIGGVT 262 (306)
Q Consensus 197 ~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~-----~~~-~~p~~------~~~~~~~~--~~~~i~v~GG~~ 262 (306)
++++|+|-| ...++||..+++-. .+. .+|.. ..-.++.. .++++|+|-|
T Consensus 129 ~~k~yfFkG---------------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-- 191 (227)
T 3lp9_A 129 GKEVYLFKG---------------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-- 191 (227)
T ss_dssp TTEEEEEET---------------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--
T ss_pred CCEEEEEEC---------------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--
Confidence 589999977 35688887644321 111 12211 12223332 2689999977
Q ss_pred CccccccceEEEeecccc
Q psy9754 263 TVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 263 ~~~~~~~~~~~~yd~~~~ 280 (306)
+.-|.||..+.
T Consensus 192 -------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 -------DHYARVKVTPX 202 (227)
T ss_dssp -------TEEEEEECCSS
T ss_pred -------CEEEEEECCcc
Confidence 34678887765
No 248
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=89.06 E-value=9 Score=31.94 Aligned_cols=147 Identities=9% Similarity=0.038 Sum_probs=75.2
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCCcE--Eec----cCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCcc
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTW--EDV----APLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDK 165 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w--~~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 165 (306)
+++..++++|+|=| ..+|+++.....- ..+ +.+|. ...++... .++++|+|-| +.
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg----------~~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD----------DK 246 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET----------TE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC----------CE
Confidence 34556999999966 4566665443211 111 22332 22222222 3789999976 34
Q ss_pred EEEEeCCCCe--e-EEcccccCCcc---eeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe---
Q psy9754 166 VECYDPRTNT--W-TTLATKLRYPR---YLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF--- 235 (306)
Q Consensus 166 ~~~~d~~~~~--W-~~~~~~~~~~~---~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~--- 235 (306)
.++|+..... + ..+ .....|. .--+++... ++++|+|-| ...++||....+-..
T Consensus 247 yWr~~~~~~~~gyPk~I-~~~GlP~~~~~IDAA~~~~~~~~~yfFkG---------------~~yw~yd~~~~~v~~gyP 310 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSI-HSFGFPNFVKKIDAAVFNPRFYRTYFFVD---------------NQYWRYDERRQMMDPGYP 310 (365)
T ss_dssp EEECSTTSCTTTCSEET-TTTTCCTTCCCCCEEEEETTTTEEEEEET---------------TEEEEEETTTTEECSSCC
T ss_pred EEEEcCCcccCCCCcee-eeccCCCCCCCcCEEEEeCCCCEEEEEEC---------------CEEEEEeCCcceecCCCC
Confidence 5666533211 1 122 1111121 222333333 589999976 356889876543221
Q ss_pred --ccc-CC-cccccceeeee-CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 236 --VTE-LV-VPRHAHSASVL-SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 236 --~~~-~p-~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
+.. .| .+..-.++... ++++|+|-| +..|.||..+.+-
T Consensus 311 k~I~~~f~g~p~~iDaA~~~~~g~~YfFkg---------~~ywr~d~~~~~v 353 (365)
T 3ba0_A 311 KLITKNFQGIGPKIDAVFYSKNKYYYFFQG---------SNQFEYDFLLQRI 353 (365)
T ss_dssp CCHHHHSTTCCSSCSEEEEETTTEEEEEET---------TEEEEEETTTTEE
T ss_pred cchhhcCCCCCCccceeeEecCCcEEEEeC---------CEEEEEECCccEE
Confidence 110 11 12223344444 889999976 4578888876554
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.75 E-value=9 Score=31.54 Aligned_cols=174 Identities=10% Similarity=0.120 Sum_probs=93.4
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE- 143 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~- 143 (306)
..+.++++.......+.+- ...-.+++.. ++.||+..-. ...++++++.....+.+....... -.++++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~-p~glavd 124 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLES-PGGLAVD 124 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSC-CCEEEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEecc-----CCceEEEecCCCCceEEEeCCCCC-ccEEEEe
Confidence 4577888877666544221 1112233332 5799988432 257888998877655442211111 123333
Q ss_pred -ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCccccccc
Q psy9754 144 -INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSV 220 (306)
Q Consensus 144 -~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~ 220 (306)
.++.||+.-.. .+.+.+++++...-+.+. ..+..|+ ++++. .++.||+..... .
T Consensus 125 ~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~------------~ 181 (349)
T 3v64_C 125 WVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN------------T 181 (349)
T ss_dssp TTTTEEEEEETT--------TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS------------S
T ss_pred cCCCeEEEEcCC--------CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC------------C
Confidence 47899987531 357889988765433331 2223332 33333 258899885432 1
Q ss_pred ceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
..+++++++...-+.+...... .-.++++- +++||+.-... ..++++|++.
T Consensus 182 ~~I~r~~~dG~~~~~~~~~~~~-~PnGla~d~~~~~lY~aD~~~-------~~I~~~~~dG 234 (349)
T 3v64_C 182 PRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKH-------HVIERANLDG 234 (349)
T ss_dssp CEEEEEETTSCSCEESCCSSCS-CEEEEEEETTTTEEEEEETTT-------TEEEEEETTS
T ss_pred CEEEEEeCCCCCcEEEEECCCC-CcceEEEeCCCCEEEEEECCC-------CEEEEEeCCC
Confidence 5688888875543433221111 11233332 67888885433 4677777654
No 250
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.42 E-value=11 Score=31.94 Aligned_cols=175 Identities=9% Similarity=0.014 Sum_probs=90.9
Q ss_pred eEEEEeCCCCCe-eeCCCCC--CCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC---Ccccccc-
Q psy9754 68 SVWSFNPNNKQW-TQEPNMT--YPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP---LKIARMG- 138 (306)
Q Consensus 68 ~~~~~d~~t~~W-~~~~~~~--~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~---~~~~~~~- 138 (306)
.++++++.++.- ..+.... ....-+.++.. ++.||+... ...++++|+.+.....+.. .......
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P 268 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNP 268 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSS
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCc
Confidence 788998865432 2331111 11122333333 579999532 2478999998887554411 1111112
Q ss_pred e-eeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc-C--C---------cceeEEEEEEeCCEEEEE
Q psy9754 139 M-AVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL-R--Y---------PRYLATLVSVNNEKLYII 203 (306)
Q Consensus 139 ~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-~--~---------~~~~~~~~~~~~~~iyi~ 203 (306)
. .++.. ++.||+.... .+.+.+||+... ...+.... . . -..-.+++...++.||+.
T Consensus 269 ~~~ia~~p~~g~lyv~d~~--------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQN--------LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CCEEEEETTTTEEEEEETT--------TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred cccEEEeCCCCEEEEEeCC--------CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 1 44444 5899997421 367899987755 22221111 0 0 011223444446789998
Q ss_pred cC-CCCCCCCCcccccccceeeEEECCCCceEecccCCc-----------c-ccc-ceeeee-CCEEEEEeCccCccccc
Q psy9754 204 GG-ASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-----------P-RHA-HSASVL-SSQILIIGGVTTVYKRT 268 (306)
Q Consensus 204 GG-~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-----------~-~~~-~~~~~~-~~~i~v~GG~~~~~~~~ 268 (306)
.. .+ ..+.++++.+.....+...+. . ... .++++- ++.||+....+
T Consensus 340 d~~~~-------------~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n------ 400 (409)
T 3hrp_A 340 DGFKG-------------YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG------ 400 (409)
T ss_dssp ETTTT-------------CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT------
T ss_pred eCCCC-------------CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC------
Confidence 65 32 568888866666554432110 0 111 233333 58899887555
Q ss_pred cceEEEeec
Q psy9754 269 LKSVECWCF 277 (306)
Q Consensus 269 ~~~~~~yd~ 277 (306)
.++.++++
T Consensus 401 -~~Ir~i~~ 408 (409)
T 3hrp_A 401 -KAIRKYAV 408 (409)
T ss_dssp -CEEEEEEE
T ss_pred -CeEEEEEe
Confidence 45666655
No 251
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.42 E-value=10 Score=31.71 Aligned_cols=194 Identities=13% Similarity=0.137 Sum_probs=99.3
Q ss_pred eEEEEeCCCCCeeeCCCC---CCC--c-------cceeeEEE----CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC
Q psy9754 68 SVWSFNPNNKQWTQEPNM---TYP--R-------KIFSFVSC----LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP 131 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~---~~~--~-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~ 131 (306)
.+++.+-.-.+|+.+... +.. + ...+++.. .+.||+.+. ...+++.+-...+|+++..
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcC
Confidence 577777777789887532 211 1 11123332 467777642 1457778888889998754
Q ss_pred C---cc--------------cccceeeEEE---CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc-----CC-
Q psy9754 132 L---KI--------------ARMGMAVAEI---NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL-----RY- 185 (306)
Q Consensus 132 ~---~~--------------~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-----~~- 185 (306)
+ |. ...-+.+++. .+.||+... ...+++.+-...+|+.+...+ |.
T Consensus 156 ~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~---------~ggl~~s~DgG~tW~~~~~~~~~~~~p~~ 226 (394)
T 3b7f_A 156 FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS---------SGGVFESTDAGTDWKPLNRGCAANFLPDP 226 (394)
T ss_dssp HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE---------TBEEEEESSTTSSCEECCTTCCCTTSSSS
T ss_pred ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC---------CCCEEEECCCCCCceECCCCccccccCCC
Confidence 2 21 0111233332 356777542 134777777778999873211 11
Q ss_pred ----cceeEEEEEEeC--CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEeccc-CCcc--cccceeeee---CC
Q psy9754 186 ----PRYLATLVSVNN--EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTE-LVVP--RHAHSASVL---SS 253 (306)
Q Consensus 186 ----~~~~~~~~~~~~--~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~-~p~~--~~~~~~~~~---~~ 253 (306)
....+.++...+ +.||+... ..+++.+-...+|+.+.. +|.. .....++.. .+
T Consensus 227 ~~~~g~~~~~i~~~~~~~~~l~vg~~---------------~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~ 291 (394)
T 3b7f_A 227 NVEFGHDPHCVVQHPAAPDILYQQNH---------------CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPR 291 (394)
T ss_dssp SSSSCBCEEEEEECSSSTTEEEEEET---------------TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTT
T ss_pred ccccCcceeEEEECCCCCCEEEEEcC---------------CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCC
Confidence 112233433332 56776421 346777777889998864 4431 122223321 45
Q ss_pred EEEEEeCccC---cc--ccccceEEEeeccccceeccCCCCcc
Q psy9754 254 QILIIGGVTT---VY--KRTLKSVECWCFDRQAWIKGVSGLPA 291 (306)
Q Consensus 254 ~i~v~GG~~~---~~--~~~~~~~~~yd~~~~~W~~~~~~~p~ 291 (306)
.||+...... .. ......++.-.-...+|+.+...+|.
T Consensus 292 ~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 292 TVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp CEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 7777631110 00 00012343333334689885545664
No 252
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=88.28 E-value=13 Score=32.81 Aligned_cols=139 Identities=12% Similarity=-0.046 Sum_probs=71.6
Q ss_pred ceeEEEeC--CCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEE
Q psy9754 114 SSVECYDP--VAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLAT 191 (306)
Q Consensus 114 ~~~~~~d~--~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 191 (306)
..++..+. ....- ++......+ ..+...-++.++++.+.. +.+..||+++.+.+.+ ...+. ..
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~-~~~~s~dg~~~~~~s~~~--------~~~~l~d~~~g~~~~l-~~~~~----~~ 154 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMR-ILSGVDTGEAVVFTGATE--------DRVALYALDGGGLREL-ARLPG----FG 154 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBE-EEEEEECSSCEEEEEECS--------SCEEEEEEETTEEEEE-EEESS----CE
T ss_pred eEEEEEeccCCCccc-cccCCCCce-eeeeCCCCCeEEEEecCC--------CCceEEEccCCcEEEe-ecCCC----ce
Confidence 46777777 43332 333322222 222222234555554432 2344778888877666 32222 22
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCccCccccccc
Q psy9754 192 LVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVTTVYKRTLK 270 (306)
Q Consensus 192 ~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~ 270 (306)
.....+++.++++...... ...++++|+.+.+++.+..-+.. ....+.- ||+.++.+.... ..
T Consensus 155 ~~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~~--~~~~~~SpDG~~l~~~~~~~-----~~ 218 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEGS--FSSASISPGMKVTAGLETAR-----EA 218 (582)
T ss_dssp EEEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSCE--EEEEEECTTSCEEEEEECSS-----CE
T ss_pred EEECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCCc--cccceECCCCCEEEEccCCC-----ee
Confidence 3333346666654432211 14589999998888766432211 1222222 666555433321 14
Q ss_pred eEEEeecccccee
Q psy9754 271 SVECWCFDRQAWI 283 (306)
Q Consensus 271 ~~~~yd~~~~~W~ 283 (306)
.+++||+++++..
T Consensus 219 ~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 219 RLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEECTTTCCEE
T ss_pred EEEEEcCCCCcEE
Confidence 7999999887776
No 253
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.20 E-value=11 Score=31.75 Aligned_cols=114 Identities=8% Similarity=-0.103 Sum_probs=63.2
Q ss_pred ceeEEecccccceeEEEEEEeecCceeeecccccccccceE--------EEEeCccCcCCCCcccceeeceEEEEeCCCC
Q psy9754 6 DWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYDVKI--------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNK 77 (306)
Q Consensus 6 ~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~~~~--------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~ 77 (306)
...|||.-.........+..+|..+.+.+..+|.....+ + +|+..-+..... .....+.+..+|+.+.
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~---~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIA---RGERTDYVEVFDPVTL 119 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETT---EEEEEEEEEEECTTTC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccc---cCCCCCEEEEEECCCC
Confidence 457788765422112467888997777776666554444 4 777653211000 0002567999999998
Q ss_pred CeeeCCCCCC------CccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEE
Q psy9754 78 QWTQEPNMTY------PRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWE 127 (306)
Q Consensus 78 ~W~~~~~~~~------~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~ 127 (306)
+-...-+.+. ...-+.++.. +..+|+..... .+.+.++|..+++-.
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~----~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP----APAVGVVDLEGKAFK 173 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS----SCEEEEEETTTTEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC----CCeEEEEECCCCcEE
Confidence 7432111111 1122233333 45788874321 267889999998854
No 254
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=88.00 E-value=9.9 Score=31.13 Aligned_cols=170 Identities=6% Similarity=-0.001 Sum_probs=81.5
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEIND 146 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~ 146 (306)
..+..+|..+++-...-..+. .-.++....+.+.+... ..+.+||..+.. +.+..+.. ....++...+
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~-~~~~~~~~--~~~~~~~s~~ 148 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSYG-------DVISVFKFGNPW-KRITDDIR--FGGVCEFSNG 148 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEET-------TEEEEEESSTTC-CBSSCCEE--EEEEEEEETT
T ss_pred cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEEc-------CEEEEEECCCCc-eeeEEecc--CCceEEEEcc
Confidence 478888888875432111111 11222223445544421 457788887661 11222212 1112222235
Q ss_pred EEEEEcccCCCCCCCCCccEEEEeCCCCe-----------------eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCC
Q psy9754 147 KIWIAGGYTGDKMNPVTDKVECYDPRTNT-----------------WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQT 209 (306)
Q Consensus 147 ~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-----------------W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~ 209 (306)
.+.+..|.. ...+..+|..+.. -..+ ... ...-.++....++++++.|+..
T Consensus 149 ~la~~sg~~-------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h--~~~v~~~~~s~~g~~l~s~s~d-- 216 (355)
T 3vu4_A 149 LLVYSNEFN-------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAH--TNPIKMVRLNRKSDMVATCSQD-- 216 (355)
T ss_dssp EEEEEESSC-------TTCEEEEECCC------------------CCEEE-CCC--SSCEEEEEECTTSSEEEEEETT--
T ss_pred EEEEeCCCc-------CcEEEEEECCCCCccccccccccccccCcccEEE-Ecc--CCceEEEEECCCCCEEEEEeCC--
Confidence 554442432 2567888887653 1111 100 1111223333457777777654
Q ss_pred CCCCcccccccce-eeEEECCCCceEecccCC---cccccceeee-eCCEEEEEeCccCccccccceEEEeecccc
Q psy9754 210 DATNTQKMYSVSD-LDVFVSNEKEWKFVTELV---VPRHAHSASV-LSSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 210 ~~~~~~~~~~~~~-~~~y~~~~~~W~~~~~~p---~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
.. +.+||..+.+-. ..+. ....-.+++. -+++.++.|+.+ ..+.+||+++.
T Consensus 217 -----------~~~v~iwd~~~~~~~--~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-------~~v~iw~~~~~ 272 (355)
T 3vu4_A 217 -----------GTIIRVFKTEDGVLV--REFRRGLDRADVVDMKWSTDGSKLAVVSDK-------WTLHVFEIFND 272 (355)
T ss_dssp -----------CSEEEEEETTTCCEE--EEEECTTCCSCEEEEEECTTSCEEEEEETT-------CEEEEEESSCC
T ss_pred -----------CCEEEEEECCCCcEE--EEEEcCCCCCcEEEEEECCCCCEEEEEECC-------CEEEEEEccCC
Confidence 45 788998765432 2222 1111112222 277888888776 57888988654
No 255
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=87.67 E-value=14 Score=32.38 Aligned_cols=143 Identities=12% Similarity=0.111 Sum_probs=69.0
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+++.++.|+.+ ..+.+||.....-..+....... ..++. -++++++.++.+ ..+..||.....-
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~v--~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSSV--WGVAFSPDDQTIASASDD--------KTVKLWNRNGQLL 460 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEECCSSCE--EEEEECTTSSEEEEEETT--------SEEEEEETTSCEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCCCe--EEEEECCCCCEEEEEcCC--------CEEEEEECCCCEE
Confidence 55666666543 45667775443333332211111 11222 245555555432 4577888765544
Q ss_pred EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeee-eCCEE
Q psy9754 177 TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASV-LSSQI 255 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~-~~~~i 255 (306)
..+ ..... .-.+++...++++++.++.. ..+.+||.....-..+.. .... -.+++. -++++
T Consensus 461 ~~~-~~~~~--~v~~~~~spd~~~las~~~d-------------~~i~iw~~~~~~~~~~~~-h~~~-v~~l~~s~dg~~ 522 (577)
T 2ymu_A 461 QTL-TGHSS--SVRGVAFSPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTG-HSSS-VRGVAFSPDGQT 522 (577)
T ss_dssp EEE-ECCSS--CEEEEEECTTSCEEEEEETT-------------SEEEEEETTSCEEEEEEC-CSSC-EEEEEECTTSSC
T ss_pred EEE-cCCCC--CEEEEEEcCCCCEEEEEeCC-------------CEEEEEcCCCCEEEEEeC-CCCC-EEEEEEcCCCCE
Confidence 444 22111 11233344457777776643 457788864332222211 0111 112222 27777
Q ss_pred EEEeCccCccccccceEEEeecccc
Q psy9754 256 LIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 256 ~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
++.++.+ ..+.+||....
T Consensus 523 l~s~~~d-------g~v~lwd~~~~ 540 (577)
T 2ymu_A 523 IASASDD-------KTVKLWNRNGQ 540 (577)
T ss_dssp EEEEETT-------SEEEEECTTSC
T ss_pred EEEEECc-------CEEEEEeCCCC
Confidence 7777766 46888886543
No 256
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=87.46 E-value=8.3 Score=29.64 Aligned_cols=101 Identities=9% Similarity=0.066 Sum_probs=57.2
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCC----cEEec--------cCCccc----ccceeeEE-ECCEEEEEcccCCCCC
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAH----TWEDV--------APLKIA----RMGMAVAE-INDKIWIAGGYTGDKM 159 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~----~w~~~--------~~~~~~----~~~~~~~~-~~~~iyv~GG~~~~~~ 159 (306)
.++++|+|-| +.+|+||..++ ..... +.+|.. ...++... .++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 4899999977 66888876322 22211 122220 22222221 3689999976
Q ss_pred CCCCccEEEEeCCCCeeEEccc----ccC-C-----cceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEEC
Q psy9754 160 NPVTDKVECYDPRTNTWTTLAT----KLR-Y-----PRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVS 228 (306)
Q Consensus 160 ~~~~~~~~~~d~~~~~W~~~~~----~~~-~-----~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~ 228 (306)
+..++||...++...-+. ..+ . +..-.+++.. .++++|++-| ...++||.
T Consensus 136 ----~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---------------~~ywr~d~ 196 (225)
T 3oyo_A 136 ----NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---------------QNYVRIDF 196 (225)
T ss_dssp ----TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET---------------TEEEEEEC
T ss_pred ----CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC---------------CEEEEEeC
Confidence 567888877666543100 111 1 2222344443 4599999977 34688988
Q ss_pred C
Q psy9754 229 N 229 (306)
Q Consensus 229 ~ 229 (306)
.
T Consensus 197 ~ 197 (225)
T 3oyo_A 197 T 197 (225)
T ss_dssp C
T ss_pred C
Confidence 7
No 257
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=87.38 E-value=9.8 Score=30.39 Aligned_cols=84 Identities=14% Similarity=0.211 Sum_probs=40.1
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCe-eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT-WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++.||+..- ...+.+||+.... |... ...... .+.+...++.||+.... ..+
T Consensus 225 ~g~l~v~t~---------~~gl~~~~~~g~~~~~~~-~~~~~~---~~~~~~~~g~l~v~t~~--------------ggl 277 (330)
T 3hxj_A 225 DGTIYVTSL---------DGHLYAINPDGTEKWRFK-TGKRIE---SSPVIGNTDTIYFGSYD--------------GHL 277 (330)
T ss_dssp TSCEEEEET---------TTEEEEECTTSCEEEEEE-CSSCCC---SCCEECTTSCEEEECTT--------------CEE
T ss_pred CCeEEEEcC---------CCeEEEECCCCCEeEEee-CCCCcc---ccceEcCCCeEEEecCC--------------CCE
Confidence 457777531 2467788765444 4433 211111 12333335788774321 357
Q ss_pred eEEECCCC-ceEecccCCcccccceeee-eCCEEEEE
Q psy9754 224 DVFVSNEK-EWKFVTELVVPRHAHSASV-LSSQILII 258 (306)
Q Consensus 224 ~~y~~~~~-~W~~~~~~p~~~~~~~~~~-~~~~i~v~ 258 (306)
+++|+... .|..- ++.. ...+++. -+++||+.
T Consensus 278 ~~~d~~g~~~~~~~--~~~~-~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 278 YAINPDGTEKWNFE--TGSW-IIATPVIDENGTIYFG 311 (330)
T ss_dssp EEECTTSCEEEEEE--CSSC-CCSCCEECTTCCEEEE
T ss_pred EEECCCCcEEEEEE--cCCc-cccceEEcCCCEEEEE
Confidence 78886422 34422 2222 2223333 46777764
No 258
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=87.17 E-value=17 Score=33.04 Aligned_cols=191 Identities=10% Similarity=0.000 Sum_probs=95.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEECC-EEEEEccCCC-------CCCCceeEEEeCCCCcE--EeccCCcc--
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSCLD-KIYAIGGQDC-------KTLLSSVECYDPVAHTW--EDVAPLKI-- 134 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~-------~~~~~~~~~~d~~~~~w--~~~~~~~~-- 134 (306)
.+++.+|..+++..... .+..+....+-. ++ .||...-... ......+++++..+.+- ..+-..+.
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 57899999999865431 111111122223 55 4544432211 03346688888776652 12211111
Q ss_pred ccccee-eEEECCE-EEEEcccCCCCCCCCCccEEEEeCCCC--eeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCC
Q psy9754 135 ARMGMA-VAEINDK-IWIAGGYTGDKMNPVTDKVECYDPRTN--TWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTD 210 (306)
Q Consensus 135 ~~~~~~-~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~ 210 (306)
...... ...-+++ |++....... .+.++.+|.++. .|..+ ........ ..+...++.+|+......
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~-----~~~i~~~d~~~~~~~~~~l-~~~~~~~~--~~~~~~g~~l~~~t~~~~-- 302 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTS-----GNRLYVKDLSQENAPLLTV-QGDLDADV--SLVDNKGSTLYLLTNRDA-- 302 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSS-----CCEEEEEETTSTTCCCEEE-ECSSSSCE--EEEEEETTEEEEEECTTC--
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCC-----CcEEEEEECCCCCCceEEE-eCCCCceE--EEEeccCCEEEEEECCCC--
Confidence 111111 1222444 4443322211 358899998765 68777 33222222 223334488988865432
Q ss_pred CCCcccccccceeeEEECCCC---ceEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 211 ATNTQKMYSVSDLDVFVSNEK---EWKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 211 ~~~~~~~~~~~~~~~y~~~~~---~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
....++.+|+++. .|+.+.+-.... . .....++.|++..-.+. ...++++|++.+....
T Consensus 303 --------~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g-----~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 303 --------PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA-----TARVEQFDYEGKRVRE 364 (693)
T ss_dssp --------TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT-----EEEEEEECTTSCEEEE
T ss_pred --------CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC-----eeEEEEEECCCCeeEE
Confidence 1257888888763 477654322221 1 33334566665543332 2578888887655444
No 259
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.01 E-value=18 Score=32.98 Aligned_cols=105 Identities=8% Similarity=-0.156 Sum_probs=53.8
Q ss_pred ceEEEEeCCC-CCeeeCCCC-CCCccceeeEEECC-EEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc----ccce
Q psy9754 67 NSVWSFNPNN-KQWTQEPNM-TYPRKIFSFVSCLD-KIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA----RMGM 139 (306)
Q Consensus 67 ~~~~~~d~~t-~~W~~~~~~-~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~----~~~~ 139 (306)
..++.+|..+ ++-..+... ........++.-++ .|++... +.......++++|..+++...+-..... ....
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 4788999988 765544322 11111111111344 4544432 2223347789999999887655322111 0111
Q ss_pred eeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEc
Q psy9754 140 AVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTL 179 (306)
Q Consensus 140 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 179 (306)
....-++++++.+..++ ...++.+|.... ...+
T Consensus 342 ~~~spdg~~~~~~~~~g------~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTG------FQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp CEECTTSCEEEEECTTS------SCEEEEECSSSC-EEES
T ss_pred eEECCCCeEEEEecCCC------ccEEEEEcCCCC-eeee
Confidence 22223566665554321 357888887666 6665
No 260
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.88 E-value=0.41 Score=40.08 Aligned_cols=65 Identities=14% Similarity=0.133 Sum_probs=31.1
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
++.++.+|+.+. ...++++|.++.+ |+.- . .... .+.+..+ +.+|+.+...
T Consensus 6 ~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~-~--~~~~--s~p~~~~-g~~~v~~s~d------------ 58 (369)
T 2hz6_A 6 TLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLK-E--DPVL--QVPTHVE-EPAFLPDPND------------ 58 (369)
T ss_dssp --CTTEEEEEET---------TSEEEEEETTTCCEEEEEE-C--CCSC--CCC------CCEEECTTT------------
T ss_pred eeeCCEEEEEcC---------CCEEEEEECCCCCEEEEec-C--CCce--ecceEcC-CCEEEEeCCC------------
Confidence 345677777542 2568999988765 8765 2 1111 1222333 6777775432
Q ss_pred cceeeEEECCCC--ceE
Q psy9754 220 VSDLDVFVSNEK--EWK 234 (306)
Q Consensus 220 ~~~~~~y~~~~~--~W~ 234 (306)
..++.+|.++. .|+
T Consensus 59 -g~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 59 -GSLYTLGSKNNEGLTK 74 (369)
T ss_dssp -CCEEEC-----CCSEE
T ss_pred -CEEEEEECCCCceeee
Confidence 45778887544 455
No 261
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=86.70 E-value=16 Score=32.01 Aligned_cols=139 Identities=12% Similarity=0.122 Sum_probs=66.5
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
+++.++.++.+ ..+.+||.....-..+....... ..++. -++++.+.++.+ ..+..+|.....-
T Consensus 437 d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~~~~v--~~~~~spd~~~las~~~d--------~~i~iw~~~~~~~ 501 (577)
T 2ymu_A 437 DDQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSSV--RGVAFSPDGQTIASASDD--------KTVKLWNRNGQLL 501 (577)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCEEEEEECCSSCE--EEEEECTTSCEEEEEETT--------SEEEEEETTSCEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCEEEEEcCCCCCE--EEEEEcCCCCEEEEEeCC--------CEEEEEcCCCCEE
Confidence 56666666543 45677886554444333221111 12222 256666666532 4577788654433
Q ss_pred EEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEE
Q psy9754 177 TTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQI 255 (306)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i 255 (306)
..+ .... .. -.+++...++++++.++.. ..+.+||........+.. .... -.+++.. +++.
T Consensus 502 ~~~-~~h~-~~-v~~l~~s~dg~~l~s~~~d-------------g~v~lwd~~~~~~~~~~~-h~~~-v~~~~fs~dg~~ 563 (577)
T 2ymu_A 502 QTL-TGHS-SS-VRGVAFSPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTG-HSSS-VWGVAFSPDGQT 563 (577)
T ss_dssp EEE-ECCS-SC-EEEEEECTTSSCEEEEETT-------------SEEEEECTTSCEEEEEEC-CSSC-EEEEEECTTSSC
T ss_pred EEE-eCCC-CC-EEEEEEcCCCCEEEEEECc-------------CEEEEEeCCCCEEEEEcC-CCCC-EEEEEEcCCCCE
Confidence 443 2111 11 1233334457776766643 457788864332222211 0111 1122222 7777
Q ss_pred EEEeCccCccccccceEEEee
Q psy9754 256 LIIGGVTTVYKRTLKSVECWC 276 (306)
Q Consensus 256 ~v~GG~~~~~~~~~~~~~~yd 276 (306)
++.+|.+ ..+.+||
T Consensus 564 l~s~~~D-------~~i~~Wd 577 (577)
T 2ymu_A 564 IASASSD-------KTVKLWN 577 (577)
T ss_dssp EEEEETT-------SCEEEEC
T ss_pred EEEEeCC-------CEEEEeC
Confidence 7777766 3466664
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=86.45 E-value=21 Score=33.26 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=75.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.||+.-.. ...|+++++....-+.+..-... .-.++++ .++.||+.-- .. ...|+++++....
T Consensus 482 ~~~LY~tD~~-----~~~I~v~~ldG~~~~~l~~~~l~-~P~gIaVDp~~g~LYwtD~----g~---~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 482 HSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGS-KPRAIVVDPVHGFMYWTDW----GT---PAKIKKGGLNGVD 548 (791)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTC-CEEEEEEETTTTEEEEEEC----SS---SCEEEEEETTSCC
T ss_pred CCcEEEEecC-----CCeEEEEeCCCCeEEEEEeCCCC-CcceEEEecCCCCEEEecC----CC---CCeEEEEecCCCc
Confidence 6799998532 35788899887665554321111 1123333 3589998741 11 2578899887655
Q ss_pred eEEcc-cccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc-ccccceeeee
Q psy9754 176 WTTLA-TKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-PRHAHSASVL 251 (306)
Q Consensus 176 W~~~~-~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-~~~~~~~~~~ 251 (306)
-..+. ..+..| ..+++. +++||+..... ..|++++++...-..+..... -..-.++++.
T Consensus 549 ~~~lv~~~l~~P----~GLavD~~~~~LYwaD~~~-------------~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 549 IYSLVTENIQWP----NGITLDLLSGRLYWVDSKL-------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 611 (791)
T ss_dssp EEEEECSSCSCE----EEEEEETTTTEEEEEETTT-------------TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred eEEEEeCCCCCc----eEEEEecCCCeEEEEeCCC-------------CcEEEEecCCCceEEEecCCCccCCCCEEEEe
Confidence 44441 122222 233333 58999986432 568899887544333322111 1122355667
Q ss_pred CCEEEEEeCcc
Q psy9754 252 SSQILIIGGVT 262 (306)
Q Consensus 252 ~~~i~v~GG~~ 262 (306)
+++||+.--..
T Consensus 612 ~~~lYwtD~~~ 622 (791)
T 3m0c_C 612 EDKVFWTDIIN 622 (791)
T ss_dssp TTEEEEEETTT
T ss_pred CCEEEEEECCC
Confidence 88999986443
No 263
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=86.39 E-value=12 Score=30.31 Aligned_cols=165 Identities=7% Similarity=-0.001 Sum_probs=79.2
Q ss_pred eEEEEeCCCCCeeeCCCCCC--CccceeeEEE--CCEEEEEccC-CCCCCCceeEEEeCCCCcEEeccCCcccccceeeE
Q psy9754 68 SVWSFNPNNKQWTQEPNMTY--PRKIFSFVSC--LDKIYAIGGQ-DCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVA 142 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~--~~~~~~~~~~--~~~iyv~GG~-~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~ 142 (306)
.+++||+.+++.+.+...+. +......... ++.+|+.... ........+++++ +++.+.+.. ........+
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~ 185 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSIC 185 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEE
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeE
Confidence 48999999988876643321 1111222222 6788875321 1112346788888 566554421 101111222
Q ss_pred EE-CC-EEEEEcccCCCCCCCCCccEEEEeCC--CC-e------eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCC
Q psy9754 143 EI-ND-KIWIAGGYTGDKMNPVTDKVECYDPR--TN-T------WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDA 211 (306)
Q Consensus 143 ~~-~~-~iyv~GG~~~~~~~~~~~~~~~~d~~--~~-~------W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~ 211 (306)
.. ++ .+|+.... .+.+++||.. +. . +..+ .. ....-.+++...++.||+.....
T Consensus 186 ~s~dg~~lyv~~~~--------~~~I~~~d~~~~~Gl~~~~~~~~~~~-~~--~~~~p~gi~~d~~G~lwva~~~~---- 250 (326)
T 2ghs_A 186 FSPDGTTGYFVDTK--------VNRLMRVPLDARTGLPTGKAEVFIDS-TG--IKGGMDGSVCDAEGHIWNARWGE---- 250 (326)
T ss_dssp ECTTSCEEEEEETT--------TCEEEEEEBCTTTCCBSSCCEEEEEC-TT--SSSEEEEEEECTTSCEEEEEETT----
T ss_pred EcCCCCEEEEEECC--------CCEEEEEEcccccCCcccCceEEEEC-CC--CCCCCCeeEECCCCCEEEEEeCC----
Confidence 22 34 67776421 2578888875 44 2 2222 10 11111234444467888864211
Q ss_pred CCcccccccceeeEEECCCCceEecccCCcccccceeeee--C-CEEEEEeCcc
Q psy9754 212 TNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--S-SQILIIGGVT 262 (306)
Q Consensus 212 ~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~-~~i~v~GG~~ 262 (306)
..+.+||++...-..+ .+|... -.+++.. + +.||+.....
T Consensus 251 ---------~~v~~~d~~g~~~~~i-~~~~~~-~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 251 ---------GAVDRYDTDGNHIARY-EVPGKQ-TTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ---------TEEEEECTTCCEEEEE-ECSCSB-EEEEEEESTTSCEEEEEEBCT
T ss_pred ---------CEEEEECCCCCEEEEE-ECCCCC-cEEEEEecCCCCEEEEEecCC
Confidence 4578898854332332 233221 1223332 2 4677765443
No 264
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=85.78 E-value=23 Score=33.03 Aligned_cols=171 Identities=13% Similarity=0.118 Sum_probs=84.0
Q ss_pred eEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCC----cEEeccCCcccccceee
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAH----TWEDVAPLKIARMGMAV 141 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~----~w~~~~~~~~~~~~~~~ 141 (306)
.+.++++....+..+..- .+...+++.. ++.||+.... ...++++++... ..+.+...... .-.++
T Consensus 405 ~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~-~P~GL 476 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQ-APDGL 476 (791)
T ss_dssp SEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCS-CCCEE
T ss_pred ceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCC-Cccee
Confidence 455666665555444221 1112233332 5789998542 255777777642 22222211111 11123
Q ss_pred EE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccc
Q psy9754 142 AE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 142 ~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~ 217 (306)
++ .+++||+.-.. .+.|.++++....-+.+. ..+..|+ ++++.. .+.||+..-..
T Consensus 477 AvD~~~~~LY~tD~~--------~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~---------- 535 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT---------- 535 (791)
T ss_dssp EEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS----------
T ss_pred eeeecCCcEEEEecC--------CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCC----------
Confidence 33 46799997421 468999998866554442 1222333 233332 48899875221
Q ss_pred cccceeeEEECCCCceEeccc--CCcccccceeee--eCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 218 YSVSDLDVFVSNEKEWKFVTE--LVVPRHAHSASV--LSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~W~~~~~--~p~~~~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
...|++.+++...-+.+.. +..| .++++ .+++||+.-... ..|++++++.
T Consensus 536 --~~~I~~~~~dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~~-------~~I~~~d~dG 589 (791)
T 3m0c_C 536 --PAKIKKGGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSKL-------HSISSIDVNG 589 (791)
T ss_dssp --SCEEEEEETTSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETTT-------TEEEEEETTS
T ss_pred --CCeEEEEecCCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeCCC-------CcEEEEecCC
Confidence 1457888876554333322 1111 12332 267888875433 4566666543
No 265
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=85.72 E-value=13 Score=30.14 Aligned_cols=63 Identities=10% Similarity=0.046 Sum_probs=32.0
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEE-eccCCcccccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEEeCCCCe
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWE-DVAPLKIARMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT 175 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~ 175 (306)
++.+.+.|+.+ ..+.++|..+++.. .+...... -..++.. ++..++.|+.+ ..+..+|.....
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~~~--v~~v~~sp~~~~l~s~~~d--------~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQSE--VYSVAFSPDNRQILSAGAE--------REIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECCCSC--EEEEEECSSTTEEEEEETT--------SCEEEEESSSCE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCc--EEEEEECCCCCEEEEEcCC--------CEEEEEeccCCc
Confidence 45566666654 45778898877532 22211111 1122222 45555555533 457788876443
No 266
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=85.42 E-value=23 Score=32.79 Aligned_cols=173 Identities=8% Similarity=0.046 Sum_probs=84.9
Q ss_pred CCeeeCCCCC-CC-ccceeeEEE----CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE--E-CCE
Q psy9754 77 KQWTQEPNMT-YP-RKIFSFVSC----LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE--I-NDK 147 (306)
Q Consensus 77 ~~W~~~~~~~-~~-~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~--~-~~~ 147 (306)
.+|+.++..+ .. ......+.+ .+.+|+.++... ..+++=.-..++|+.+..++... ....+ . .+.
T Consensus 529 ~tW~~~~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~~~----~~v~~S~D~G~tW~~~~~l~~~~--~~i~~d~~~~~~ 602 (763)
T 3a0f_A 529 DSWTLFQTCVPSLEVGNGGTIAVGADGKTFVWSPSKADG----KGPYTSSDYGKTWTAPSGLSKQT--TGIAADRVQANT 602 (763)
T ss_dssp SSCEECSSCCTTCBTTBCCEEEECTTSSCEEEECSSCCS----SCCEEESSTTSCCBCCBSCCCCC--SCEEECSSSTTC
T ss_pred cCCccCCCCCcccccCCcceEEEecCCCcEEEEecccCC----CceEEeCCCCCCCeecCCCCCCc--ceEEEeccCCCE
Confidence 4698875333 11 111222222 246777663211 12333333457899886655431 11221 1 345
Q ss_pred EEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccC---CcceeEEEEEE--eCCEEEEEcCCCCCCCCCcccccccce
Q psy9754 148 IWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLR---YPRYLATLVSV--NNEKLYIIGGASQTDATNTQKMYSVSD 222 (306)
Q Consensus 148 iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~---~~~~~~~~~~~--~~~~iyi~GG~~~~~~~~~~~~~~~~~ 222 (306)
+|+.. ...+++-.=.-.+|+.+...+| ..... ..+. .++.||+.+.. ..
T Consensus 603 ~y~g~----------~g~v~~S~DgG~tW~~~~~~lp~~~~~~~~--i~~~~~~~~~l~~~~~~--------------~~ 656 (763)
T 3a0f_A 603 FYVYV----------EGDFFVSTDGGKSYTKKGNGLPCCWTYTGT--PVTSNLRAGELWVSVKG--------------VG 656 (763)
T ss_dssp EEEEE----------TTEEEEESSTTSBCEEECBTSCCSSCCCEE--EEECSSSTTCEEEEETT--------------TE
T ss_pred EEEEc----------CCCEEEEeCCCcCccccccCCCcccCcccc--EEECCCCCCcEEEEcCC--------------Ce
Confidence 55541 1344444334567998743444 22221 2222 24788887642 22
Q ss_pred eeEEECCCCceEecccCCcccc----cceeeee---CCEEEEEe--CccCccccccceEEEeeccccceeccC
Q psy9754 223 LDVFVSNEKEWKFVTELVVPRH----AHSASVL---SSQILIIG--GVTTVYKRTLKSVECWCFDRQAWIKGV 286 (306)
Q Consensus 223 ~~~y~~~~~~W~~~~~~p~~~~----~~~~~~~---~~~i~v~G--G~~~~~~~~~~~~~~yd~~~~~W~~~~ 286 (306)
+++-+=.-.+|+++..+|.... ....+.. ...||++| -... ...+++-+-...+|+.+.
T Consensus 657 l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~-----~~gl~~S~D~G~tW~~~~ 724 (763)
T 3a0f_A 657 IYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIPSASQ-----PEGLYMSTDNGGLWTRLN 724 (763)
T ss_dssp EEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEECSTTS-----CSEEEEESSTTSCCEECS
T ss_pred EEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCceEEEEEEcccCC-----CcEEEEeCCCCCCcEecc
Confidence 3433223468999986654431 2222222 35789888 1111 135666666778899853
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=85.17 E-value=15 Score=31.38 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=74.0
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT 177 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 177 (306)
+.||+.-.. ..+.++|+.+++.+.+.. ...+ -..+++ -++.||+..-..... ...+..++.... +.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~~~~-P~giavd~dG~lyVad~~~~~~----~~gv~~~~~~~~-~~ 219 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT-NIGQ-CADVNFTLNGDMVVVDDQSSDT----NTGIYLFTRASG-FT 219 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC-CCSC-EEEEEECTTCCEEEEECCSCTT----SEEEEEECGGGT-TC
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec-CCCC-ccEEEECCCCCEEEEcCCCCcc----cceEEEEECCCC-ee
Confidence 799998432 678999999988877654 1111 112222 345688875322111 233555554322 21
Q ss_pred ---EcccccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCce-EecccCCcccccceeeee-
Q psy9754 178 ---TLATKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEW-KFVTELVVPRHAHSASVL- 251 (306)
Q Consensus 178 ---~~~~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W-~~~~~~p~~~~~~~~~~~- 251 (306)
.+ +....|. .+++.. ++.||+..... ..++++|+++.+. +.+...........++.-
T Consensus 220 ~~~~~-~~~~~P~---giavd~~~G~lyv~d~~~-------------~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp 282 (433)
T 4hw6_A 220 ERLSL-CNARGAK---TCAVHPQNGKIYYTRYHH-------------AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP 282 (433)
T ss_dssp CEEEE-EECSSBC---CCEECTTTCCEEECBTTC-------------SEEEEECTTTCCEEEEEEECSCCSSCEEEEECT
T ss_pred ccccc-cccCCCC---EEEEeCCCCeEEEEECCC-------------CEEEEEECCCCeEEEEEeccCCCCCcccEEEeC
Confidence 22 2222222 233433 58898865322 5689999886654 322211111111223333
Q ss_pred CC-EEEEEeCccCccccccceEEEeecc
Q psy9754 252 SS-QILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 252 ~~-~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
++ .||+.--.. ..+++++++
T Consensus 283 dG~~LYvad~~~-------~~I~~~~~d 303 (433)
T 4hw6_A 283 TGDWAYIIYNGK-------HCIYRVDYN 303 (433)
T ss_dssp TSSEEEEEETTT-------TEEEEEEBC
T ss_pred CCCEEEEEeCCC-------CEEEEEeCC
Confidence 44 588886444 577786654
No 268
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=85.17 E-value=11 Score=28.83 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=32.7
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCCcE--Eecc----CCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEe
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAHTW--EDVA----PLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYD 170 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w--~~~~----~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d 170 (306)
.++++|+|=| ...|+++...... ..+. .+|. ... ++...++++|+|-| +..++|+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG----------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD----------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET----------TEEEEEE
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC----------CEEEEEe
Confidence 4789999976 4566665433221 1222 2232 222 23335899999965 5678887
Q ss_pred CC
Q psy9754 171 PR 172 (306)
Q Consensus 171 ~~ 172 (306)
..
T Consensus 88 ~~ 89 (219)
T 1hxn_A 88 TK 89 (219)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=85.14 E-value=20 Score=31.92 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=57.0
Q ss_pred eEEEEeCCCCC--eeeCCCCCCC------ccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCc--EEeccCCcccc-
Q psy9754 68 SVWSFNPNNKQ--WTQEPNMTYP------RKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT--WEDVAPLKIAR- 136 (306)
Q Consensus 68 ~~~~~d~~t~~--W~~~~~~~~~------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w~~~~~~~~~~- 136 (306)
.++.+|.++++ |+.-...+.. ......+..+++||+... ...++.+|..+++ |+.-..-+...
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~AlD~~TG~~~W~~~~~~~~~~~ 152 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVALNKNTGKVVWKKKFADHGAGY 152 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEEEESSSCCEEEEEECSCGGGTC
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEEEECCCCCEEeeecCCCCCcCc
Confidence 48899998876 8764332211 112344567889988632 2568899998886 87532211111
Q ss_pred -cceeeEEECC------EEEEEcccCCCCCCCCCccEEEEeCCCCe--eEE
Q psy9754 137 -MGMAVAEIND------KIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTT 178 (306)
Q Consensus 137 -~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~ 178 (306)
....-++.++ .+|+ |....... ....++.||+++.+ |+.
T Consensus 153 ~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~--~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 153 TMTGAPTIVKDGKTGKVLLIH-GSSGDEFG--VVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp BCCSCCEEEECTTTCCEEEEE-CCBCGGGC--CBCEEEEECTTTCCEEEEE
T ss_pred ccccCCEEeCCCcCCcEEEEE-eccccccC--CCCEEEEEECCCCCEEeec
Confidence 1112234455 5655 32211100 13689999998765 865
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.06 E-value=14 Score=29.86 Aligned_cols=175 Identities=12% Similarity=0.088 Sum_probs=92.2
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCC----CcEEeccCCcccccce
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVA----HTWEDVAPLKIARMGM 139 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~----~~w~~~~~~~~~~~~~ 139 (306)
.+.+.++|+.+.+...+-+ ....-.+++.. ++.||+.... ...++++++.. ...+.+-+.... .-.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~ 80 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQ-APD 80 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCS-CCC
T ss_pred CCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCC-CcC
Confidence 3568889988877655421 11222334433 5789998543 25788888876 222222111111 112
Q ss_pred eeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc-ccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcc
Q psy9754 140 AVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT-KLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 140 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~ 215 (306)
++++ .++.||+.-.. .+.+.++|++...-..+.. .+..|+ .+++. .++.||+.....
T Consensus 81 glavd~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~~-------- 141 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT-------- 141 (316)
T ss_dssp EEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS--------
T ss_pred EEEEeecCCeEEEEECC--------CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccCC--------
Confidence 3333 47899997431 3678899987654433311 222332 33343 258899875321
Q ss_pred cccccceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 216 KMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
...+++++++...-+.+..... ..-.+++.- +++||+.-... ..++++|++.
T Consensus 142 ----~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~~-------~~I~~~d~dg 195 (316)
T 1ijq_A 142 ----PAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSKL-------HSISSIDVNG 195 (316)
T ss_dssp ----SCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTS
T ss_pred ----CCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECCC-------CeEEEEecCC
Confidence 1467888886544333322111 111234433 67899886544 5788888764
No 271
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=84.55 E-value=11 Score=28.26 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=57.2
Q ss_pred ECCEEEEEccCCCCCCCceeEEEeCCCCc---EEeccC----CcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEE
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYDPVAHT---WEDVAP----LKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVEC 168 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w~~~~~----~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 168 (306)
.++++|+|-| +..|+|+..+.. =+.+.. +|.....++... .++++|++-| +..++
T Consensus 60 ~~g~~yfFkg-------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG----------~~yw~ 122 (196)
T 3c7x_A 60 KDGKFVFFKG-------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG----------NKYYR 122 (196)
T ss_dssp TTSCEEEEET-------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCCcEEEecC-------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC----------CEEEE
Confidence 3789999977 667888754211 112222 332222222222 2689999976 56788
Q ss_pred EeCCCCeeEE-----cccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 169 YDPRTNTWTT-----LATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 169 ~d~~~~~W~~-----~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
||..+++-.. +..-+..+..-.++....++ ++|++-| ...++||..+.+
T Consensus 123 yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg---------------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 123 FNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG---------------NKYWKFNNQKLK 177 (196)
T ss_dssp EETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET---------------TEEEEEETTTTE
T ss_pred EeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC---------------CEEEEEECCcce
Confidence 9887764321 11001122222344444344 9999977 346888886654
No 272
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=84.05 E-value=18 Score=30.31 Aligned_cols=26 Identities=12% Similarity=0.165 Sum_probs=19.6
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccceec
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
++..++.|+.+ ..+.+||.++++-..
T Consensus 353 ~~~~l~s~s~d-------g~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 353 SDSVVMTGSYN-------NFFRMFDRNTKRDIT 378 (447)
T ss_dssp TSSEEEEECST-------TEEEEEETTTCCEEE
T ss_pred CCCEEEEeccC-------CEEEEEEcCCCccee
Confidence 67777888777 578999998876533
No 273
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=83.55 E-value=27 Score=32.03 Aligned_cols=208 Identities=11% Similarity=0.016 Sum_probs=98.3
Q ss_pred eceEEEEeCC---CCCeeeCCCCCC---Cc-cce-eeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccc
Q psy9754 66 SNSVWSFNPN---NKQWTQEPNMTY---PR-KIF-SFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIAR 136 (306)
Q Consensus 66 ~~~~~~~d~~---t~~W~~~~~~~~---~~-~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~ 136 (306)
...+|+.+.. .+.|+.+-+... .. ... ..... +++..+++..........++++|..+++..... .+...
T Consensus 132 ~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~ 210 (741)
T 1yr2_A 132 QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVK 210 (741)
T ss_dssp SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEE
T ss_pred EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCce
Confidence 3667888876 667776533221 11 111 22222 555555543222122256899999999875431 11111
Q ss_pred cceeeEEE-CCEEEEEcccCCC-----CCCCCCccEEEEeCCCCee--EEcccccCCcceeEEEEEEeCCEEEEEcCCCC
Q psy9754 137 MGMAVAEI-NDKIWIAGGYTGD-----KMNPVTDKVECYDPRTNTW--TTLATKLRYPRYLATLVSVNNEKLYIIGGASQ 208 (306)
Q Consensus 137 ~~~~~~~~-~~~iyv~GG~~~~-----~~~~~~~~~~~~d~~~~~W--~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~ 208 (306)
. ...+-. ++.|++..-.... ........++.+++.+..- ..+......+..........+++.+++.....
T Consensus 211 ~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 F-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp S-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred e-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 1 111222 3455554321110 0000124688888876642 12211111222233333444565444433221
Q ss_pred CCCCCcccccccceeeEEECCCC--c-eEecccCCcccccceeeeeCCEEEEEeCccCccccccceEEEeeccc--ccee
Q psy9754 209 TDATNTQKMYSVSDLDVFVSNEK--E-WKFVTELVVPRHAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDR--QAWI 283 (306)
Q Consensus 209 ~~~~~~~~~~~~~~~~~y~~~~~--~-W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~--~~W~ 283 (306)
.+. ..+++++|+++. . |..+..-..... .....-++.||+...... ....++++|+++ ..|+
T Consensus 290 ~~~--------~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~ 356 (741)
T 1yr2_A 290 TDP--------VNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGA----PLKKIVRVDLSGSTPRFD 356 (741)
T ss_dssp TCS--------CCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTC----TTCEEEEEECSSSSCEEE
T ss_pred CCC--------cceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCC----CCCEEEEEeCCCCccccE
Confidence 111 267899998776 6 776653222211 112223667777654321 125789999887 5788
Q ss_pred ccCCC
Q psy9754 284 KGVSG 288 (306)
Q Consensus 284 ~~~~~ 288 (306)
.+.+.
T Consensus 357 ~l~~~ 361 (741)
T 1yr2_A 357 TVVPE 361 (741)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 76543
No 274
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=83.22 E-value=13 Score=28.12 Aligned_cols=102 Identities=14% Similarity=0.106 Sum_probs=55.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCc---EEeccC--Cccc--ccceeeEEE-CCEEEEEcccCCCCCCCCCccEEEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHT---WEDVAP--LKIA--RMGMAVAEI-NDKIWIAGGYTGDKMNPVTDKVECY 169 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w~~~~~--~~~~--~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 169 (306)
++++|+|-| +.+|+|+..+-. =+.+.. +|.. ...++.... ++++|+|-| +..++|
T Consensus 79 ~~~iyfFkG-------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG----------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRG-------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG----------NQVWRY 141 (207)
T ss_dssp TTEEEEEET-------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET----------TEEEEE
T ss_pred CCcEEEEcc-------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC----------CEEEEE
Confidence 589999977 567888643221 122333 2221 222222222 489999976 567899
Q ss_pred eCCCCeeEEccc-----c-cCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 170 DPRTNTWTTLAT-----K-LRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 170 d~~~~~W~~~~~-----~-~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
|..+++-..--+ . ...+..-.+++.. ++++|++-| ...++||..+.+
T Consensus 142 d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~-~g~~YfFkg---------------~~y~rf~~~~~~ 194 (207)
T 1pex_A 142 DDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEK-NGYIYFFNG---------------PIQFEYSIWSNR 194 (207)
T ss_dssp ETTTTEECSSCCCBHHHHSTTSCSCCSEEEEE-TTEEEEEET---------------TEEEEEETTTTE
T ss_pred eCcCccccCCCCccHHHcCCCCCCCccEEEEc-CCcEEEEEC---------------CEEEEEeCCccE
Confidence 987654221100 0 0112112233333 599999977 346888876655
No 275
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.99 E-value=18 Score=29.56 Aligned_cols=66 Identities=5% Similarity=-0.022 Sum_probs=34.6
Q ss_pred CCEEEEEcccCCCCCCCCCcc-EEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDK-VECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~-~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
++++++.|+.+ .. +..+|..+.+-...-........-.++....+++.++.|+.. ..+
T Consensus 206 ~g~~l~s~s~d--------~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-------------~~v 264 (355)
T 3vu4_A 206 KSDMVATCSQD--------GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-------------WTL 264 (355)
T ss_dssp TSSEEEEEETT--------CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-------------CEE
T ss_pred CCCEEEEEeCC--------CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-------------CEE
Confidence 56666666533 44 888998876543220100011111233333456777776653 457
Q ss_pred eEEECCCC
Q psy9754 224 DVFVSNEK 231 (306)
Q Consensus 224 ~~y~~~~~ 231 (306)
.+||+...
T Consensus 265 ~iw~~~~~ 272 (355)
T 3vu4_A 265 HVFEIFND 272 (355)
T ss_dssp EEEESSCC
T ss_pred EEEEccCC
Confidence 77777544
No 276
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=82.97 E-value=18 Score=29.62 Aligned_cols=54 Identities=9% Similarity=-0.002 Sum_probs=27.6
Q ss_pred eEEEEeCCCCCeeeCCCCCCC--ccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCC-CCcEEe
Q psy9754 68 SVWSFNPNNKQWTQEPNMTYP--RKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPV-AHTWED 128 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~~--~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~-~~~w~~ 128 (306)
.++.+|+.+++.+.+...+.+ ..-..++.. ++ .||+... + .+.+|+.. +++...
T Consensus 17 ~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-~------~v~~~~~~~~g~~~~ 75 (365)
T 1jof_A 17 FTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-K------KWSSFAVKSPTEIVH 75 (365)
T ss_dssp EEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-T------EEEEEEEEETTEEEE
T ss_pred EEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-c------eEEEEEECCCCCEEE
Confidence 345677888887665432211 111223332 44 4666543 1 57777765 555443
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.79 E-value=20 Score=30.08 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=73.6
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccC--CcccccceeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAP--LKIARMGMAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRT 173 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~--~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~ 173 (306)
++.||+.... ...++++++....-+.+.. +..+ .+.++ .++.||+.--.. ...++++++..
T Consensus 170 ~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~-------~~~I~~~~~dG 234 (400)
T 3p5b_L 170 HSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT-------PAKIKKGGLNG 234 (400)
T ss_dssp TTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS-------SCCEEEEETTS
T ss_pred CCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC-------CCEEEEEeCCC
Confidence 7899998542 2578888888776544422 2112 23333 368899874211 25788998875
Q ss_pred CeeEEc-ccccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc-ccccceeee
Q psy9754 174 NTWTTL-ATKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV-PRHAHSASV 250 (306)
Q Consensus 174 ~~W~~~-~~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~-~~~~~~~~~ 250 (306)
..-+.+ ...+..| .+++.. .+++||+..... ..|+++|++...-+.+...+. ...-.++++
T Consensus 235 ~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~~-------------~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 235 VDIYSLVTENIQWP---NGITLDLLSGRLYWVDSKL-------------HSISSIDVNGGNRKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp CSCEEEECSSCSCE---EEEEEETTTTEEEEEETTT-------------TEEEEEETTSCCCEEEEECSSTTSSEEEEEE
T ss_pred CccEEEEECCCCce---EEEEEEeCCCEEEEEECCC-------------CEEEEEeCCCCccEEEEeCCCCCCCCEEEEE
Confidence 443333 1122222 233333 258999986432 678999987544333332111 112235566
Q ss_pred eCCEEEEEeC
Q psy9754 251 LSSQILIIGG 260 (306)
Q Consensus 251 ~~~~i~v~GG 260 (306)
.++.||+..-
T Consensus 299 ~~~~lywtd~ 308 (400)
T 3p5b_L 299 FEDKVFWTDI 308 (400)
T ss_dssp ETTEEEEEES
T ss_pred eCCEEEEecC
Confidence 7888998863
No 278
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=82.27 E-value=19 Score=29.31 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=34.3
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCcc
Q psy9754 192 LVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGVT 262 (306)
Q Consensus 192 ~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~ 262 (306)
++...++.||+..... ..+.+||+++.+...+...|....-.+++.- ++++|+.....
T Consensus 253 ia~d~~G~l~va~~~~-------------~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAH-------------SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTCCEEEEEGGG-------------TEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred EEECCCCCEEEEccCC-------------CeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 4444468888875332 5789999855666655544422222233332 67899987543
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=82.15 E-value=12 Score=31.92 Aligned_cols=124 Identities=8% Similarity=-0.005 Sum_probs=61.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEE-ECC-EEEEEccCCCCCCCceeEEEeCCCCcEE---eccCCcccccceee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVS-CLD-KIYAIGGQDCKTLLSSVECYDPVAHTWE---DVAPLKIARMGMAV 141 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~w~---~~~~~~~~~~~~~~ 141 (306)
..+.+||+.+++...+.. ...+- ..++. -++ .||+...... .....+..++... .+. .++.+ ..-+.+
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~~~P-~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~~~~l~~~---~~p~gi 231 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GLSKV-RTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKVITELTKG---QNCNGA 231 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CCSCE-EEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCSEEEEEEC---SSCCCE
T ss_pred CcEEEEECCCCEEEEEec-CCCCc-ceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceeeeeeeccC---CCceEE
Confidence 457778888777665533 11111 12222 234 5998864322 1223455566533 232 22222 122333
Q ss_pred EEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCE-EEEEcCC
Q psy9754 142 AEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEK-LYIIGGA 206 (306)
Q Consensus 142 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~-iyi~GG~ 206 (306)
++. ++.||+.--. .+.+++||+.+..-..+ ...+....-..++...+++ ||+....
T Consensus 232 avdp~~g~lyv~d~~--------~~~V~~~~~~~~~~~~~-~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 232 ETHPINGELYFNSWN--------AGQVFRYDFTTQETTPL-FTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EECTTTCCEEEEETT--------TTEEEEEETTTTEEEEE-EECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred EEeCCCCEEEEEECC--------CCEEEEEECCCCcEEEE-EEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 333 5788887421 36799999987765343 2221111112344444455 8888543
No 280
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.95 E-value=21 Score=29.65 Aligned_cols=114 Identities=9% Similarity=-0.040 Sum_probs=56.8
Q ss_pred ceeEEecccccceeEEEEEEeecCceeeeccccccccc-ceE------EEEeCccCcCCCCcccceeeceEEEEeCCCCC
Q psy9754 6 DWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYD-VKI------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQ 78 (306)
Q Consensus 6 ~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~-~~~------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~ 78 (306)
...+|+.-+........+..||+.+.+.+..+|..... ..+ +|+..-....... ....+.+..||+.+.+
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~r---g~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAK---GKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEecccccccc---CCCCCeEEEEECCCCc
Confidence 35678876521111116778888666666666654333 122 7777532211100 0024678899998765
Q ss_pred eeeCCCCC-CCc-----cceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEE
Q psy9754 79 WTQEPNMT-YPR-----KIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWE 127 (306)
Q Consensus 79 W~~~~~~~-~~~-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~ 127 (306)
-...-+++ .+| .-..++.. +..+|+..-.. .+.+.++| .+++-.
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~----~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA----GPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCC----CCeEEEEE-CCCCEE
Confidence 32211111 111 11122222 45677774211 36688899 887643
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.69 E-value=22 Score=29.81 Aligned_cols=173 Identities=13% Similarity=0.108 Sum_probs=90.0
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCC----cEEeccCCccccccee
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAH----TWEDVAPLKIARMGMA 140 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~----~w~~~~~~~~~~~~~~ 140 (306)
..+.++++....+..+.+ ....-.+++.. ++.||+..-. ...++++++... ..+.+..... ..-.+
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~-~~p~g 163 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDI-QAPDG 163 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSSC-SCEEE
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCC-CCccc
Confidence 467777777766655422 11222333333 5799998442 256788887652 2222211111 11123
Q ss_pred eEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccc-ccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCccc
Q psy9754 141 VAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLAT-KLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQK 216 (306)
Q Consensus 141 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~ 216 (306)
+++ .++.||+.-.. ...+.+++++...-+.+.. .+..|+ ++++.. ++.||+..-..
T Consensus 164 lavD~~~~~lY~~d~~--------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~--------- 223 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT--------- 223 (400)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS---------
T ss_pred EEEEecCCceEEEECC--------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC---------
Confidence 333 37899998531 3578899988765544421 222333 333332 48899875321
Q ss_pred ccccceeeEEECCCCceEecc--cCCcccccceeeee--CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 217 MYSVSDLDVFVSNEKEWKFVT--ELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 217 ~~~~~~~~~y~~~~~~W~~~~--~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
...+++++++...=+.+. .+..| .++++- +++||+.-... ..++++|++..
T Consensus 224 ---~~~I~~~~~dG~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~~-------~~I~~~d~dG~ 278 (400)
T 3p5b_L 224 ---PAKIKKGGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSKL-------HSISSIDVNGG 278 (400)
T ss_dssp ---SCCEEEEETTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETTT-------TEEEEEETTSC
T ss_pred ---CCEEEEEeCCCCccEEEEECCCCce---EEEEEEeCCCEEEEEECCC-------CEEEEEeCCCC
Confidence 145788888654333222 11111 233333 67899985443 57888887643
No 282
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=81.19 E-value=25 Score=29.99 Aligned_cols=115 Identities=10% Similarity=-0.062 Sum_probs=64.2
Q ss_pred cceeEEecccccceeEEEEEEeecCceeeecccccccccceE--------EEEeCccCcCCCCcccceeeceEEEEeCCC
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYDVKI--------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNN 76 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~~~~--------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t 76 (306)
....+||.-.........+..+|+.+.+.+..+|..... .+ +||.--...... .....+.+..+|+.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~---~G~~~~~VsviD~~t 158 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIA---RGKRTDYVEVFDPVT 158 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETT---EEEEEEEEEEECTTT
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccc---cCCCCCEEEEEECCC
Confidence 445788887642111156788999888777777765554 44 776632100000 000256899999999
Q ss_pred CCeeeCCCCC-CC-----ccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEE
Q psy9754 77 KQWTQEPNMT-YP-----RKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWE 127 (306)
Q Consensus 77 ~~W~~~~~~~-~~-----~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~ 127 (306)
++-..--+++ .. ..-+.++.. ++.+|+..-. ..+.+.++|..+++-.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEE
Confidence 8743211111 11 112233333 3578887421 1367899999998853
No 283
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=81.15 E-value=3.5 Score=31.79 Aligned_cols=103 Identities=9% Similarity=0.108 Sum_probs=55.7
Q ss_pred ECCEEEEEccCCCCCCCceeEEEe--CCC--CcEE----ecc----CCc----ccccceeeEE-ECCEEEEEcccCCCCC
Q psy9754 97 CLDKIYAIGGQDCKTLLSSVECYD--PVA--HTWE----DVA----PLK----IARMGMAVAE-INDKIWIAGGYTGDKM 159 (306)
Q Consensus 97 ~~~~iyv~GG~~~~~~~~~~~~~d--~~~--~~w~----~~~----~~~----~~~~~~~~~~-~~~~iyv~GG~~~~~~ 159 (306)
.++++|+|-| +.+|+|+ +.+ ..-. .+. .|| .....++... .++++|+|-|
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG------ 137 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG------ 137 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET------
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC------
Confidence 5899999977 6688888 321 1111 111 222 1122222222 2689999976
Q ss_pred CCCCccEEEEeCCCCeeEE-----cccccCC------cceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEE
Q psy9754 160 NPVTDKVECYDPRTNTWTT-----LATKLRY------PRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFV 227 (306)
Q Consensus 160 ~~~~~~~~~~d~~~~~W~~-----~~~~~~~------~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~ 227 (306)
+..++||..+++-.. +....|. +..-.+++.. .++++|+|-|. .-++||
T Consensus 138 ----~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~---------------~Ywr~d 198 (227)
T 3lp9_A 138 ----DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD---------------HYARVK 198 (227)
T ss_dssp ----TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT---------------EEEEEE
T ss_pred ----CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC---------------EEEEEE
Confidence 567889877654321 1001111 1222233332 45899999773 458888
Q ss_pred CCCC
Q psy9754 228 SNEK 231 (306)
Q Consensus 228 ~~~~ 231 (306)
..+.
T Consensus 199 ~~~~ 202 (227)
T 3lp9_A 199 VTPX 202 (227)
T ss_dssp CCSS
T ss_pred CCcc
Confidence 7665
No 284
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=80.73 E-value=20 Score=28.73 Aligned_cols=101 Identities=12% Similarity=0.129 Sum_probs=53.1
Q ss_pred eceEEEEeCCCCCe-eeCCCCCCCccceeeEEECCEEEEEccCCCCC---C-CceeEEEeCCCCcEEeccCCccccccee
Q psy9754 66 SNSVWSFNPNNKQW-TQEPNMTYPRKIFSFVSCLDKIYAIGGQDCKT---L-LSSVECYDPVAHTWEDVAPLKIARMGMA 140 (306)
Q Consensus 66 ~~~~~~~d~~t~~W-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~---~-~~~~~~~d~~~~~w~~~~~~~~~~~~~~ 140 (306)
...++.+|+.+++. ..+.. + .....+...+.+++.+...... . ...++.+| +++++.+..- ....
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~ 220 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFY 220 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEE
T ss_pred cceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC----ccee
Confidence 46799999998876 55544 2 2233333433355555433211 2 45788888 6777666432 1111
Q ss_pred eEEECCE-EEEEcccCCCCCCCCCccEEEEeCCCCeeEEc
Q psy9754 141 VAEINDK-IWIAGGYTGDKMNPVTDKVECYDPRTNTWTTL 179 (306)
Q Consensus 141 ~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 179 (306)
...-+++ |++.+...... ......++.+| +.++..+
T Consensus 221 ~~spdg~~l~~~~~~~~~~-~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 221 AVDSDGERILLYGKPEKKY-MSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEECSSCEEEEECCSSSC-CCSSCEEEEEC--SSCEEES
T ss_pred eECCCCCEEEEEEccccCC-ccccceEEEEC--CCceEec
Confidence 2244554 54444322111 01135788998 6666666
No 285
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=80.40 E-value=31 Score=30.66 Aligned_cols=141 Identities=9% Similarity=0.049 Sum_probs=70.0
Q ss_pred ceEEEEeCCCCCeeeCC-C--C---CCCccceeeEEE-CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccc-cc
Q psy9754 67 NSVWSFNPNNKQWTQEP-N--M---TYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIAR-MG 138 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~-~--~---~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~-~~ 138 (306)
..+..+|..+++-...- . + .....-.+++.. +++.++.|+.+ ..+.++|..+.+....-...... ..
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccce
Confidence 45777888776543221 1 0 111111223333 56666777754 46778899887754322211111 11
Q ss_pred eeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCccccc
Q psy9754 139 MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 139 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~ 218 (306)
...+..++..++.++.+ ..+..+|+.+..-... ..... ..-.+++...+++.++.++..
T Consensus 287 ~~~~~~~~~~l~s~s~d--------~~i~~~~~~~~~~~~~-~~gh~-~~v~~l~~spdg~~l~s~s~D----------- 345 (611)
T 1nr0_A 287 QLGIIWTKQALVSISAN--------GFINFVNPELGSIDQV-RYGHN-KAITALSSSADGKTLFSADAE----------- 345 (611)
T ss_dssp EEEEEECSSCEEEEETT--------CCEEEEETTTTEEEEE-ECCCS-SCEEEEEECTTSSEEEEEETT-----------
T ss_pred eEEEEEcCCEEEEEeCC--------CcEEEEeCCCCCcceE-EcCCC-CCEEEEEEeCCCCEEEEEeCC-----------
Confidence 12222344444544432 4577888877653322 11111 111233333456777776654
Q ss_pred ccceeeEEECCCCceEe
Q psy9754 219 SVSDLDVFVSNEKEWKF 235 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~ 235 (306)
..+.+||+.+.....
T Consensus 346 --~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 346 --GHINSWDISTGISNR 360 (611)
T ss_dssp --SCEEEEETTTCCEEE
T ss_pred --CcEEEEECCCCceee
Confidence 457889988776543
No 286
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=80.29 E-value=24 Score=29.33 Aligned_cols=72 Identities=10% Similarity=-0.136 Sum_probs=42.8
Q ss_pred cceeEEecccccceeEEEEEEeecCceeeecccccccccceE-------EEEeCccCcCCCCcccceeeceEEEEeCCCC
Q psy9754 5 WDWELICKEGTEGIKLLVIWIMDIVTYDLSIERVSQRYDVKI-------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNK 77 (306)
Q Consensus 5 ~~~~l~~~gG~~~~~~~~~~~~~~~~W~~~~~~p~~r~~~~~-------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~ 77 (306)
...++||.-.....-...+..+|+.+++.+..+|.....+-+ +||......... .....+.+..+|+.++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~---~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSA---KGKRTDYVEVFDPVTF 106 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTT---SSSEEEEEEEECTTTC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccc---cCCCCCEEEEEECCCC
Confidence 345677776543211115778899888888888876555322 777742111000 0013688999999997
Q ss_pred Ce
Q psy9754 78 QW 79 (306)
Q Consensus 78 ~W 79 (306)
+=
T Consensus 107 ~v 108 (368)
T 1mda_H 107 LP 108 (368)
T ss_dssp CE
T ss_pred CE
Confidence 64
No 287
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=80.06 E-value=18 Score=27.61 Aligned_cols=146 Identities=14% Similarity=0.120 Sum_probs=74.1
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCCc-E--Eecc----CCcccccceeeEE-ECCEEEEEcccCCCCCCCCCc
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHT-W--EDVA----PLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTD 164 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w--~~~~----~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 164 (306)
+++..++++|+|-| ..+|+++..... . ..+. .+|. ...++... .++++|+|-| +
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG----------~ 96 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG----------N 96 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET----------T
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC----------C
Confidence 34556999999977 556666654321 1 1222 2232 22222222 2689999976 5
Q ss_pred cEEEEeCCCCe--e-EEccc-ccCC--cceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE---
Q psy9754 165 KVECYDPRTNT--W-TTLAT-KLRY--PRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK--- 234 (306)
Q Consensus 165 ~~~~~d~~~~~--W-~~~~~-~~~~--~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~--- 234 (306)
..++||..+.. + ..+.. ..|. .... +++.. .++++|+|-| ...++||..+++-.
T Consensus 97 ~yW~y~~~~~~~gyPk~I~~~g~p~~~~~ID-AAf~~~~~g~~YfFkG---------------~~ywr~d~~~~~v~~gy 160 (218)
T 1gen_A 97 EYWIYSASTLERGYPKPLTSLGLPPDVQRVD-AAFNWSKNKKTYIFAG---------------DKFWRYNEVKKKMDPGF 160 (218)
T ss_dssp EEEEEETTEECTTCSEEGGGGTCCTTCCCCS-EEEEETTTTEEEEEET---------------TEEEEEETTTTEECSSC
T ss_pred EEEEEcCccccCCCCccHhhcCCCCCcCCcc-EEEEEcCCCeEEEEEC---------------CEEEEEECccccccCCC
Confidence 67888742110 0 11211 1111 1222 33332 4589999977 34688887665322
Q ss_pred --ecc-cC-Ccccccceeeee--CCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 235 --FVT-EL-VVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 235 --~~~-~~-p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+. .. ..+..-.++... ++.+|+|-|. ..|.||..+..
T Consensus 161 Pr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~---------~y~~~~~~~~~ 204 (218)
T 1gen_A 161 PKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA---------YYLKLENQSLK 204 (218)
T ss_dssp CEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT---------EEEEEETTEEE
T ss_pred CcchhhccCCCCCCCCEEEEEcCCCcEEEEECC---------EEEEEECCcee
Confidence 111 11 112222233333 3899999763 45677765544
No 288
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=79.86 E-value=13 Score=33.11 Aligned_cols=192 Identities=10% Similarity=0.045 Sum_probs=98.5
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE----CCEEEEEccCCC------------CCCCceeEEEeCCCCc--EE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC----LDKIYAIGGQDC------------KTLLSSVECYDPVAHT--WE 127 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~--w~ 127 (306)
..++.++|+.+.+-.++-.+|....-|.++.. .+.+|+.+.... +...+.+-+.|..+.+ |+
T Consensus 111 ~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q 190 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ 190 (595)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEE
Confidence 46799999999775554456655555565542 467887753211 1344567788998876 44
Q ss_pred eccCCcccccceeeEEECCEEEEEcccCCC-----------------------------CCCCCCccEEEEeCCCCeeEE
Q psy9754 128 DVAPLKIARMGMAVAEINDKIWIAGGYTGD-----------------------------KMNPVTDKVECYDPRTNTWTT 178 (306)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-----------------------------~~~~~~~~~~~~d~~~~~W~~ 178 (306)
-.-.- .-.+..+.--++.+|+..-.++. ......+.+.+.|+.+.+.+.
T Consensus 191 I~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~ 268 (595)
T 1fwx_A 191 VLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL 268 (595)
T ss_dssp EEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS
T ss_pred EEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce
Confidence 32110 00111111112233333211100 000013568888888733222
Q ss_pred cccccCCcceeEEEEEEeCCE-EEEEcCCCCCCCCCcccccccceeeEEECCCCc-e---------EecccCCcc-cccc
Q psy9754 179 LATKLRYPRYLATLVSVNNEK-LYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE-W---------KFVTELVVP-RHAH 246 (306)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~-iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~-W---------~~~~~~p~~-~~~~ 246 (306)
+....+.+..-|++....|++ +|+.+... ..+.+||.++.. + ..+.+++.+ +-.|
T Consensus 269 ~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-------------~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 269 FTRYIPIANNPHGCNMAPDKKHLCVAGKLS-------------PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp SEEEEEEESSCCCEEECTTSSEEEEECTTS-------------SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred eEEEEecCCCceEEEEcCCCCEEEEeCCCC-------------CeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 002233333445555555565 55554433 668889887542 1 122233333 2344
Q ss_pred eeeeeCCEEEEEeCccCccccccceEEEeeccc
Q psy9754 247 SASVLSSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 247 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
.+..-+|.+|+.-..+ +++.+||.++
T Consensus 336 ~aF~~dG~aY~t~~ld-------sqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLD-------SQVVKWNIED 361 (595)
T ss_dssp EEECTTSEEEEEETTT-------TEEEEEEHHH
T ss_pred EEECCCCeEEEEEecC-------CcEEEEEhhH
Confidence 4444467888887666 5677888776
No 289
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=79.63 E-value=24 Score=28.95 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=39.0
Q ss_pred ceeeEEECCCCceEecccCCcccccceeeee-CC-EEEEEeCccCccccccceEEEeecccc--ceeccCCCC-cccccc
Q psy9754 221 SDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS-QILIIGGVTTVYKRTLKSVECWCFDRQ--AWIKGVSGL-PATILG 295 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~-p~~r~~ 295 (306)
..++++|.++.+ .+..++... -.+++.- ++ .||+.++ +++.+||.+++ +=. ..+ +.+..-
T Consensus 286 ~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~---------~~v~v~D~~t~~l~~~---~~i~~~G~~P 350 (361)
T 2oiz_A 286 AEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG---------GNVNVYDISQPEPKLL---RTIEGAAEAS 350 (361)
T ss_dssp SEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS---------SCEEEEECSSSSCEEE---EEETTSCSSE
T ss_pred ceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC---------CeEEEEECCCCcceee---EEeccCCCCc
Confidence 578999987764 444455554 4444444 44 5665542 46889999887 432 232 334444
Q ss_pred eeeEEecC
Q psy9754 296 HSSVALPL 303 (306)
Q Consensus 296 ~~~~~~~~ 303 (306)
+..++.|+
T Consensus 351 ~~~~~~p~ 358 (361)
T 2oiz_A 351 LQVQFHPV 358 (361)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 45555554
No 290
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=78.61 E-value=30 Score=29.76 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=55.1
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCc---EEecc---CCcc--cccceeeEE-ECCEEEEEcccCCCCCCCCCccEEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHT---WEDVA---PLKI--ARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVEC 168 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w~~~~---~~~~--~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 168 (306)
++++|+|=| +.+|+++..+-. =+.+. -+|. ....++... .++++|+|-| +..++
T Consensus 318 ~g~~~fFKg-------~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG----------~~yw~ 380 (450)
T 1su3_A 318 RDEVRFFKG-------NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA----------NKYWR 380 (450)
T ss_dssp GTEEEEEET-------TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCeEEEEeC-------CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC----------CEEEE
Confidence 689999977 567777643210 01111 1121 122222222 2689999976 56888
Q ss_pred EeCCCCeeEE-----ccccc-CCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE
Q psy9754 169 YDPRTNTWTT-----LATKL-RYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK 234 (306)
Q Consensus 169 ~d~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~ 234 (306)
||..+.+-.. +.... ..+..--+++. .++++|+|-| ...++||..+.+=.
T Consensus 381 yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~-~~g~~YFFkg---------------~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 381 YDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM-KDGFFYFFHG---------------TRQYKFDPKTKRIL 436 (450)
T ss_dssp EETTTTEECSSCSEEHHHHSTTSCSCCSEEEE-ETTEEEEEET---------------TEEEEEETTTTEEE
T ss_pred EeCCCccccCCCCcchhhcCCCCCCCccEEEE-cCCeEEEEeC---------------CEEEEEECCcceEe
Confidence 9876554321 10000 11211123333 4599999977 34688887666533
No 291
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.33 E-value=53 Score=32.14 Aligned_cols=170 Identities=11% Similarity=0.125 Sum_probs=91.7
Q ss_pred eeceEEEEeCCCCCeeeCCC--CCCCccceeeEEE--C---CEEEEEccCC-----CCCCCceeEEEeCCCCcEEeccCC
Q psy9754 65 VSNSVWSFNPNNKQWTQEPN--MTYPRKIFSFVSC--L---DKIYAIGGQD-----CKTLLSSVECYDPVAHTWEDVAPL 132 (306)
Q Consensus 65 ~~~~~~~~d~~t~~W~~~~~--~~~~~~~~~~~~~--~---~~iyv~GG~~-----~~~~~~~~~~~d~~~~~w~~~~~~ 132 (306)
....+..+|+.+ |+.+.. +...-...+++.+ . +..+++|-.. .......+.+|+...++.+.+..-
T Consensus 805 ~~s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~ 882 (1158)
T 3ei3_A 805 EVHNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK 882 (1158)
T ss_dssp EEEEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE
T ss_pred eeEEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE
Confidence 345677888865 665532 2222223333333 1 3566666421 112456677888776666666544
Q ss_pred cccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCC
Q psy9754 133 KIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDAT 212 (306)
Q Consensus 133 ~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~ 212 (306)
...-.-.+++.++|+|.+.=| .++..|+...++--.. .....+...........+.|++-.-..
T Consensus 883 ~v~g~v~al~~~~g~Lla~ig----------~~l~vy~l~~~~~L~~-~~~~~~~i~~~~l~~~~~~I~vgD~~~----- 946 (1158)
T 3ei3_A 883 EVKGAVYSMVEFNGKLLASIN----------STVRLYEWTTEKELRT-ECNHYNNIMALYLKTKGDFILVGDLMR----- 946 (1158)
T ss_dssp EESSCEEEEEEETTEEEEEET----------TEEEEEEECTTSCEEE-EEEECCCSCEEEEEEETTEEEEEESSB-----
T ss_pred EcCCcCEEEeeeCCEEEEEcC----------CEEEEEECCCCceEEE-EeeccccEEEEEEeccCCEEEEEEhhh-----
Confidence 443344566778887666433 5678888776542111 000011111111222225665533221
Q ss_pred CcccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEe
Q psy9754 213 NTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIG 259 (306)
Q Consensus 213 ~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~G 259 (306)
.-.+..|+...++...++.-..+|...++..+++.-++.+
T Consensus 947 -------Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~a 986 (1158)
T 3ei3_A 947 -------SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGA 986 (1158)
T ss_dssp -------CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEE
T ss_pred -------eEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEE
Confidence 1456778988899998887788888777777754444443
No 292
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=77.46 E-value=49 Score=31.26 Aligned_cols=24 Identities=17% Similarity=0.109 Sum_probs=18.8
Q ss_pred CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++..++.|+.+ ..+.+||.++++-
T Consensus 222 dg~~lasgs~D-------g~i~lWd~~~g~~ 245 (902)
T 2oaj_A 222 NSLHIITIHED-------NSLVFWDANSGHM 245 (902)
T ss_dssp TSSEEEEEETT-------CCEEEEETTTCCE
T ss_pred CCCEEEEEECC-------CeEEEEECCCCcE
Confidence 77888888877 5788999877654
No 293
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.63 E-value=44 Score=32.09 Aligned_cols=109 Identities=15% Similarity=0.091 Sum_probs=55.2
Q ss_pred ceeE-EEeCCCCcEEeccCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEE
Q psy9754 114 SSVE-CYDPVAHTWEDVAPLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLAT 191 (306)
Q Consensus 114 ~~~~-~~d~~~~~w~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~ 191 (306)
..++ ++|..+++.+.+. .........+. -+++..+++.. ...++.+|+++.+-..+ ........ ..
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~tg~~~~~-~~~~~~~v-~~ 425 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLETGKPTVI-ERSREAMI-TD 425 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEET--------TSEEEEEETTTCCEEEE-EECSSSCC-CC
T ss_pred CceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECC--------CCeEEEEECCCCceEEe-ccCCCCCc-cc
Confidence 5678 8898888766655 11111122222 24554444432 24789999998877665 21111111 12
Q ss_pred EEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecc
Q psy9754 192 LVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT 237 (306)
Q Consensus 192 ~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~ 237 (306)
.....+++.+++++....... .......++++|+.+.+...+.
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~---~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGET---DGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTT---CSCCEEEEEEEETTTTEEEECS
T ss_pred eEECCCCCeEEEEecCccccc---cCCCCCeEEEEECCCCcEEEee
Confidence 333445665555543210000 0001257899999887654443
No 294
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=72.45 E-value=60 Score=29.89 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=69.0
Q ss_pred ceEEEEeCCCCCee--eCCCCCCCccceeeEEE-CC-EEEEEccCCCCCCCceeEEEeCCCC--cE--EeccCCcccccc
Q psy9754 67 NSVWSFNPNNKQWT--QEPNMTYPRKIFSFVSC-LD-KIYAIGGQDCKTLLSSVECYDPVAH--TW--EDVAPLKIARMG 138 (306)
Q Consensus 67 ~~~~~~d~~t~~W~--~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~w--~~~~~~~~~~~~ 138 (306)
..+++.++.+++-+ .+...+........... ++ .|++..... ....++++|..+. .+ +.+.+-.... .
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~ 322 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREKGV-R 322 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCTTC-C
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCCCc-e
Confidence 46777777665321 11111112222222222 44 455444321 2467888998875 45 5443221111 1
Q ss_pred eeeE-EECCEEEEEcccCCCCCCCCCccEEEEeCCC-CeeEE-cccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcc
Q psy9754 139 MAVA-EINDKIWIAGGYTGDKMNPVTDKVECYDPRT-NTWTT-LATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 139 ~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~-~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~ 215 (306)
.... ..++.||+........ ...++.+|..+ ..|+. +.+. ......... ...++.|++......
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~----~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~-~~~~~~lv~~~~~~g------- 389 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAV----NHKLLIAPRGQPSDWSHVLVDH-SEDVFMESI-AVRSNYLVVAGRRAG------- 389 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCT----TCEEEEEETTSTTCCCCEEECC-CSSEEEEEE-EECSSEEEEEEEETT-------
T ss_pred EEEeeeeCCEEEEEeCCCCCC----CcEEEEEcCCCcccceeeEECC-CCCcEEEEE-EEECCEEEEEEEeCC-------
Confidence 1111 2377888886543111 35789999876 67876 5122 112121222 333477777653321
Q ss_pred cccccceeeEEEC
Q psy9754 216 KMYSVSDLDVFVS 228 (306)
Q Consensus 216 ~~~~~~~~~~y~~ 228 (306)
...++++++
T Consensus 390 ----~~~l~~~dl 398 (751)
T 2xe4_A 390 ----LTRIWTMMA 398 (751)
T ss_dssp ----EEEEEEEEC
T ss_pred ----EEEEEEEec
Confidence 256788886
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=72.24 E-value=77 Score=31.05 Aligned_cols=163 Identities=12% Similarity=0.166 Sum_probs=88.1
Q ss_pred EEEEEEeecCceeeecccccccccc--eE-----------EEEeCccCcCCCCcccceeeceEEEEeCCCCCeeeCCCCC
Q psy9754 20 LLVIWIMDIVTYDLSIERVSQRYDV--KI-----------NSLAGGVDPSSDEKTTDIVSNSVWSFNPNNKQWTQEPNMT 86 (306)
Q Consensus 20 ~~~~~~~~~~~W~~~~~~p~~r~~~--~~-----------i~v~GG~~~~~~~~~~~~~~~~~~~~d~~t~~W~~~~~~~ 86 (306)
...+..+||.+|+.+....-..... ++ .+++|-......+ .......++.|+...++.+.+...+
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e--~~~~~Gri~vf~v~~~kL~lv~~~~ 883 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE--AEPKQGRIVVFQYSDGKLQTVAEKE 883 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTC--SSCCCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCC--CCCCceEEEEEEEECCEEEEEEEEE
Confidence 3467788888888654333221111 11 5566532211000 0113456777776666666665545
Q ss_pred CCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEecc--CCcccccceeeEEECCEEEEEcccCCCCCCCCCc
Q psy9754 87 YPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVA--PLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTD 164 (306)
Q Consensus 87 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~--~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 164 (306)
....-.+++.++|+|.+.=| +.+.+|+...++.-+.. ..+. .......+.+++|++---.. .-
T Consensus 884 v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~vgD~~~-------Sv 948 (1158)
T 3ei3_A 884 VKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMR-------SV 948 (1158)
T ss_dssp ESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEEEESSB-------CE
T ss_pred cCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEEEEhhh-------eE
Confidence 55556667778887777655 56777887765421111 0000 00112224577766532111 23
Q ss_pred cEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEE
Q psy9754 165 KVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKL 200 (306)
Q Consensus 165 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 200 (306)
.+..|+...++-..+ ..-..+|...++..+.++.+
T Consensus 949 ~~~~y~~~~~~L~~~-a~D~~~~~vta~~~ld~~t~ 983 (1158)
T 3ei3_A 949 LLLAYKPMEGNFEEI-ARDFNPNWMSAVEILDDDNF 983 (1158)
T ss_dssp EEEEEETTTTEEEEE-EECCSCBCEEEEEEEETTEE
T ss_pred EEEEEEcCCCeEEEE-EeecccccEEEEEEEccCcE
Confidence 567789999999998 55556777666666664543
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=70.72 E-value=40 Score=27.18 Aligned_cols=159 Identities=11% Similarity=0.066 Sum_probs=81.8
Q ss_pred eceEEEEeCCCCC---eeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEecc--CCcccccc
Q psy9754 66 SNSVWSFNPNNKQ---WTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVA--PLKIARMG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~~---W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~--~~~~~~~~ 138 (306)
...++++++.... +.....+..| .+++. .++.||+.-.. ...++++++....-+.+. .+..+
T Consensus 56 ~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P--- 124 (318)
T 3sov_A 56 EEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP--- 124 (318)
T ss_dssp TTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE---
T ss_pred CCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc---
Confidence 3567888876542 1111111111 12333 37899998432 256888888765433332 22112
Q ss_pred eeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEc-ccccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCc
Q psy9754 139 MAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTL-ATKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNT 214 (306)
Q Consensus 139 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~ 214 (306)
.+.++ .++.||+.--. . ...++++++.-..-+.+ ...+..| .+++.. .+++||+.....
T Consensus 125 ~giavdp~~g~ly~td~~----~---~~~I~r~~~dG~~~~~~~~~~l~~P---nglavd~~~~~lY~aD~~~------- 187 (318)
T 3sov_A 125 RAIALDPSSGFMYWTDWG----E---VPKIERAGMDGSSRFIIINSEIYWP---NGLTLDYEEQKLYWADAKL------- 187 (318)
T ss_dssp EEEEEEGGGTEEEEEECS----S---SCEEEEEETTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETTT-------
T ss_pred cEEEEeCCCCEEEEEecC----C---CCEEEEEEcCCCCeEEEEECCCCCc---cEEEEeccCCEEEEEECCC-------
Confidence 13333 35889987411 1 36789998874433333 1122222 233333 258999986432
Q ss_pred ccccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEe
Q psy9754 215 QKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIG 259 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~G 259 (306)
..++++|++...-+.+..-. ...-.++++.++.+|+.-
T Consensus 188 ------~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~~~lywtd 225 (318)
T 3sov_A 188 ------NFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTD 225 (318)
T ss_dssp ------TEEEEEETTSCSCEEEECSC-CSCEEEEEEETTEEEEEE
T ss_pred ------CEEEEEcCCCCceEEEecCC-CCCceEEEEeCCEEEEEe
Confidence 67889988754433332211 111234555677888874
No 297
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=69.93 E-value=63 Score=29.13 Aligned_cols=104 Identities=6% Similarity=-0.122 Sum_probs=50.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCc--cceeeEEE-CCEEEEEccCCCC----CCCceeEEEeCCCCcEEeccCCcccc--c
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPR--KIFSFVSC-LDKIYAIGGQDCK----TLLSSVECYDPVAHTWEDVAPLKIAR--M 137 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~--~~~~~~~~-~~~iyv~GG~~~~----~~~~~~~~~d~~~~~w~~~~~~~~~~--~ 137 (306)
..++.+|..+++-..+....... .....+.. +++..+++..+.. .....++++|..+++-+++....... .
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL 116 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc
Confidence 36888888877654432211110 11222222 6665555543322 22477899999988766554432211 1
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEc
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTL 179 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 179 (306)
......-+++..+++. ...++++|..+.....+
T Consensus 117 ~~~~~SPdG~~la~~~---------~~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIF---------ENNIYYCAHVGKQAIRV 149 (723)
T ss_dssp SBCCBCSSTTCEEEEE---------TTEEEEESSSSSCCEEE
T ss_pred cccEECCCCCEEEEEE---------CCeEEEEECCCCceEEE
Confidence 1111122343333322 13577777776655444
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=68.91 E-value=53 Score=27.87 Aligned_cols=134 Identities=13% Similarity=0.036 Sum_probs=64.7
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCccceeeEE-ECCEEEEEccCCCCCCCceeEEEeCCCCcEE---eccCCcccccceeeE
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPRKIFSFVS-CLDKIYAIGGQDCKTLLSSVECYDPVAHTWE---DVAPLKIARMGMAVA 142 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~---~~~~~~~~~~~~~~~ 142 (306)
..++++|+.+++...+.. ...+- ..++. -++.||+..-... .....+..++.... +. .++.+ .....++
T Consensus 162 ~~I~~id~~~g~v~~~~~-~~~~P-~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~~-~~~~~~~~~~---~~P~gia 234 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTT-NIGQC-ADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRASG-FTERLSLCNA---RGAKTCA 234 (433)
T ss_dssp SCEEEEETTTTEEEEECC-CCSCE-EEEEECTTCCEEEEECCSC-TTSEEEEEECGGGT-TCCEEEEEEC---SSBCCCE
T ss_pred CCEEEEECCCCEEEEeec-CCCCc-cEEEECCCCCEEEEcCCCC-cccceEEEEECCCC-eecccccccc---CCCCEEE
Confidence 457778887777665543 11111 22222 2556888853221 11233555554322 21 12211 1122333
Q ss_pred EE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCee-EEcccccCCcceeEEEEEEeCC-EEEEEcCCCCCCCCCccccc
Q psy9754 143 EI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW-TTLATKLRYPRYLATLVSVNNE-KLYIIGGASQTDATNTQKMY 218 (306)
Q Consensus 143 ~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~~~~~-~iyi~GG~~~~~~~~~~~~~ 218 (306)
+. ++.||+.--. .+.+++||+.+... +.+......+. ...++...++ .||+..-..
T Consensus 235 vd~~~G~lyv~d~~--------~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYvad~~~----------- 294 (433)
T 4hw6_A 235 VHPQNGKIYYTRYH--------HAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYIIYNGK----------- 294 (433)
T ss_dssp ECTTTCCEEECBTT--------CSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEEEETTT-----------
T ss_pred EeCCCCeEEEEECC--------CCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEEEeCCC-----------
Confidence 32 5788886421 35799999986665 33311111121 1234444444 599875432
Q ss_pred ccceeeEEECC
Q psy9754 219 SVSDLDVFVSN 229 (306)
Q Consensus 219 ~~~~~~~y~~~ 229 (306)
..+++++++
T Consensus 295 --~~I~~~~~d 303 (433)
T 4hw6_A 295 --HCIYRVDYN 303 (433)
T ss_dssp --TEEEEEEBC
T ss_pred --CEEEEEeCC
Confidence 567776654
No 299
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=68.47 E-value=34 Score=25.46 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=56.9
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCc-EEeccCC--cc--cccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHT-WEDVAPL--KI--ARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPR 172 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~-w~~~~~~--~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~ 172 (306)
++++|+|-| +..|+|+..+.. =+.+..+ |. ....++....++++|+|-| +..++||..
T Consensus 64 ~~~~yfFkG-------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~~ 126 (195)
T 1itv_A 64 SKKLFFFSG-------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDVK 126 (195)
T ss_dssp TCCEEEEET-------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEETT
T ss_pred CCeEEEEeC-------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeCC
Confidence 678999977 667888754211 1112222 21 1233333334689999976 567899987
Q ss_pred CCeeEE-----cccc-cCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCc
Q psy9754 173 TNTWTT-----LATK-LRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKE 232 (306)
Q Consensus 173 ~~~W~~-----~~~~-~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~ 232 (306)
+++-.. +... +..|..-.++.... +.+|++-|. ..++||..+..
T Consensus 127 ~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~-g~~Yffkg~---------------~y~~~~~~~~~ 176 (195)
T 1itv_A 127 AQMVDPRSASEVDRMFPGVPLDTHDVFQFR-EKAYFCQDR---------------FYWRVSSRSEL 176 (195)
T ss_dssp TTEECGGGCEEHHHHSTTSCSSCSEEEEET-TEEEEEETT---------------EEEEEECCTTC
T ss_pred cccccCCCccChhhcCCCCCCCCCEEEEeC-CeEEEEeCC---------------EEEEEECCccE
Confidence 764321 1000 01122223444455 999999773 46788876554
No 300
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=67.08 E-value=72 Score=28.73 Aligned_cols=63 Identities=10% Similarity=-0.048 Sum_probs=33.5
Q ss_pred ccEEEEeCCCCee-EEcccccCC----cceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEec
Q psy9754 164 DKVECYDPRTNTW-TTLATKLRY----PRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFV 236 (306)
Q Consensus 164 ~~~~~~d~~~~~W-~~~~~~~~~----~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~ 236 (306)
..+..+|..+.+- ..+ ..... ...........+++++++...... ....++++|+.+.+...+
T Consensus 228 ~~l~~~d~~~~~~~~~l-~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---------~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEM-MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ---------NVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEEC-CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS---------CEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEe-eCCccCCCccceeEEEEEeCCCeEEEEEEcCCC---------CeEEEEEEeCCCCcceEE
Confidence 3788899887763 455 22110 112222333346776655432211 125688899988776544
No 301
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=66.51 E-value=78 Score=28.89 Aligned_cols=65 Identities=12% Similarity=0.056 Sum_probs=34.1
Q ss_pred ceEEEEeCCCCCeeeCCCCC-CCccc--e-eeE-EECCEEEEEccCCCC----CCCceeEEEeCCCCcEEeccC
Q psy9754 67 NSVWSFNPNNKQWTQEPNMT-YPRKI--F-SFV-SCLDKIYAIGGQDCK----TLLSSVECYDPVAHTWEDVAP 131 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~-~~~~~--~-~~~-~~~~~iyv~GG~~~~----~~~~~~~~~d~~~~~w~~~~~ 131 (306)
..++.+|+.+++=..+-... ..... . ... +-+++..+++..+.. ....+++++|..+++.+++..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 36888999888754431111 11111 1 112 225554444432211 223678899999998776644
No 302
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=65.29 E-value=67 Score=27.67 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=31.7
Q ss_pred eceEEEEeCCCC----CeeeCCC---C----CCCccceeeEEECCEEEEEc-cCCCCCCCceeEEEeCCCCcE
Q psy9754 66 SNSVWSFNPNNK----QWTQEPN---M----TYPRKIFSFVSCLDKIYAIG-GQDCKTLLSSVECYDPVAHTW 126 (306)
Q Consensus 66 ~~~~~~~d~~t~----~W~~~~~---~----~~~~~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~~d~~~~~w 126 (306)
++.++.+|..++ +-.+.-. + ...+-++..+.-++ |||.. |.........+.++|..+.+-
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 578999998766 2222111 1 11122222233356 77752 221223447899999998774
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=64.90 E-value=80 Score=28.42 Aligned_cols=175 Identities=11% Similarity=0.058 Sum_probs=94.1
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE 143 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~ 143 (306)
...+.++++.+..-..+-+++.-+.-.++... ++.||+..-. ...++++++.....+.+...... .-.++++
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAv 87 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGLD-YPEGMAV 87 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEEE
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCCC-CcceEEE
Confidence 35677888876544333333322223333333 5799998542 25688888877655544332211 1123334
Q ss_pred --ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccc
Q psy9754 144 --INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 144 --~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
.+++||+.-.. .+.+++++++...-+.+. ..+..|+ ++++.. ++.||...-..
T Consensus 88 D~~~~~LY~tD~~--------~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g~------------ 144 (628)
T 4a0p_A 88 DWLGKNLYWADTG--------TNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWGG------------ 144 (628)
T ss_dssp ETTTTEEEEEETT--------TTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEECSS------------
T ss_pred EeCCCEEEEEECC--------CCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCCC------------
Confidence 46899997421 367899998755433331 2333333 344432 58999975211
Q ss_pred cceeeEEECCCCceEecc-cCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 220 VSDLDVFVSNEKEWKFVT-ELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~-~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
...+++.+++...-+.+. .+..| .+++.- +++||+.-... +.++++|++.
T Consensus 145 ~~~I~r~~~dG~~~~~l~~~~~~P---~GlalD~~~~~LY~aD~~~-------~~I~~~d~dG 197 (628)
T 4a0p_A 145 KPKIDRAAMDGSERTTLVPNVGRA---NGLTIDYAKRRLYWTDLDT-------NLIESSNMLG 197 (628)
T ss_dssp SCEEEEEETTSCSCEEEECSCSSE---EEEEEETTTTEEEEEETTT-------TEEEEEETTS
T ss_pred CCEEEEEeCCCCceEEEECCCCCc---ceEEEccccCEEEEEECCC-------CEEEEEcCCC
Confidence 156788887755544333 22211 123322 57888876443 4666777654
No 304
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=62.84 E-value=66 Score=27.35 Aligned_cols=118 Identities=14% Similarity=0.042 Sum_probs=60.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEE--CCEEEEEcccCC---CCCCCCCccEEEEeCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEI--NDKIWIAGGYTG---DKMNPVTDKVECYDPR 172 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~---~~~~~~~~~~~~~d~~ 172 (306)
...+|+......... ..+.++|+.+++-.. .++..... .++.. ++++|+..-... ... ..+.+.++|+.
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~--~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~--~~~~VsviD~~ 157 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRILG--MTDGGFLP-HPVAAEDGSFFAQASTVFERIARGK--RTDYVEVFDPV 157 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEEE--EEEECSSC-EEEECTTSSCEEEEEEEEEETTEEE--EEEEEEEECTT
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEEE--EEECCCCC-ceEECCCCCEEEEEeccccccccCC--CCCEEEEEECC
Confidence 357888865322111 789999999887432 22222222 23332 457888742100 000 03679999999
Q ss_pred CCeeEEcccccC-Ccc-----eeEEEEEEeC-CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE
Q psy9754 173 TNTWTTLATKLR-YPR-----YLATLVSVNN-EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK 234 (306)
Q Consensus 173 ~~~W~~~~~~~~-~~~-----~~~~~~~~~~-~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~ 234 (306)
+.+-..- -..+ .+| .-+.+....+ .++|+..-.. ...+.++|+.+.+-.
T Consensus 158 t~~vv~~-I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~------------~~~VsVID~~t~kvv 213 (426)
T 3c75_H 158 TFLPIAD-IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP------------APAVGVVDLEGKTFD 213 (426)
T ss_dssp TCCEEEE-EEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS------------SCEEEEEETTTTEEE
T ss_pred CCcEEEE-EECCCccccccCCCcceEEEcCCCCEEEEEecCC------------CCeEEEEECCCCeEE
Confidence 9874322 1111 111 1112333333 4677764211 156788888876643
No 305
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=62.36 E-value=90 Score=28.15 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=70.7
Q ss_pred eeEEECCEEEEEccCCCCCCCceeEEEeCCCC-cE--Eec----cCCcccccceeeEE-ECCEEEEEcccCCCCCCCCCc
Q psy9754 93 SFVSCLDKIYAIGGQDCKTLLSSVECYDPVAH-TW--EDV----APLKIARMGMAVAE-INDKIWIAGGYTGDKMNPVTD 164 (306)
Q Consensus 93 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~-~w--~~~----~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 164 (306)
+++..++++|+|-| ..+|+++.... .. ..+ +.+|. ...++... .++++|+|-| +
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG----------~ 509 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG----------N 509 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEET----------T
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEec----------C
Confidence 34445889999976 55777766542 11 112 12222 22222222 2678999865 5
Q ss_pred cEEEEeCCCC--ee-EEccc-ccCC--cceeEEEEEE-eCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceE---
Q psy9754 165 KVECYDPRTN--TW-TTLAT-KLRY--PRYLATLVSV-NNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWK--- 234 (306)
Q Consensus 165 ~~~~~d~~~~--~W-~~~~~-~~~~--~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~--- 234 (306)
..++|+..+. -+ ..+.. ..|. .+.. +++.. .++++|+|-| ...++||....+-.
T Consensus 510 ~yWry~~~~l~~GYPk~Is~~G~P~~~~~ID-AAf~~~~~gktYFFkG---------------~~ywryd~~~~~vd~gY 573 (631)
T 1ck7_A 510 EYWIYSASTLERGYPKPLTSLGLPPDVQRVD-AAFNWSKNKKTYIFAG---------------DKFWRYNEVKKKMDPGF 573 (631)
T ss_dssp EEEEEETTEECTTCCEEGGGGTCCTTCCCCC-BCCCCTTTCEEEEEET---------------TEEEEEETTTTEECTTC
T ss_pred EEEEECCCccccCCCccchhcCCCCCCCcce-eEEEecCCCeEEEEEC---------------CEEEEEcCCcccccCCC
Confidence 6778874211 01 11100 0111 1122 22221 3589999977 35688887554311
Q ss_pred --eccc-CC-cccccceeeee--CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 235 --FVTE-LV-VPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 235 --~~~~-~p-~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
.+.. .+ .+..-.++... ++.+|+|-|. ..|.||..+.
T Consensus 574 Pk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~---------~Ywr~d~~~~ 616 (631)
T 1ck7_A 574 PKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA---------YYLKLENQSL 616 (631)
T ss_dssp CEETTTSCSSCCTTCCEEECCTTSCBCEEEETT---------EEECCBTTBT
T ss_pred CcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC---------EEEEEeCccc
Confidence 1111 11 11222233333 3789999774 4567776554
No 306
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=60.28 E-value=73 Score=26.42 Aligned_cols=106 Identities=8% Similarity=0.039 Sum_probs=58.8
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCc--E-EeccC--Cccc--ccceeeEE-ECCEEEEEcccCCCCCCCCCccEEEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHT--W-EDVAP--LKIA--RMGMAVAE-INDKIWIAGGYTGDKMNPVTDKVECY 169 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~--w-~~~~~--~~~~--~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~ 169 (306)
++++|+|-| +.+|+|+..... + +.+.. +|.. ...++... .++++|+|-| +..++|
T Consensus 236 ~g~~~fFkg-------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG----------~~yw~y 298 (365)
T 3ba0_A 236 RNQVFLFKD-------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD----------NQYWRY 298 (365)
T ss_dssp GTEEEEEET-------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET----------TEEEEE
T ss_pred CCEEEEEeC-------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC----------CEEEEE
Confidence 789999977 567777654221 1 22333 2321 22222222 2589999965 567899
Q ss_pred eCCCCeeEEccc-c-----cCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEe
Q psy9754 170 DPRTNTWTTLAT-K-----LRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKF 235 (306)
Q Consensus 170 d~~~~~W~~~~~-~-----~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~ 235 (306)
|..+++-..--+ . +..+..-.+++...++++|+|-| ...++||..+.+-..
T Consensus 299 d~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg---------------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 299 DERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG---------------SNQFEYDFLLQRITK 355 (365)
T ss_dssp ETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET---------------TEEEEEETTTTEEEE
T ss_pred eCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC---------------CEEEEEECCccEEec
Confidence 877665322100 0 11222223445553589999977 346889887666443
No 307
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=59.81 E-value=74 Score=26.35 Aligned_cols=24 Identities=8% Similarity=0.117 Sum_probs=17.9
Q ss_pred CC-EEEEEeCccCccccccceEEEeeccccce
Q psy9754 252 SS-QILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 252 ~~-~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 237 ~~~~~l~s~~~d-------g~i~iwd~~~~~~ 261 (447)
T 3dw8_B 237 NSCNTFVYSSSK-------GTIRLCDMRASAL 261 (447)
T ss_dssp SCTTEEEEEETT-------SCEEEEETTTCSS
T ss_pred CCCcEEEEEeCC-------CeEEEEECcCCcc
Confidence 45 788888776 5788999887663
No 308
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=56.79 E-value=1.2e+02 Score=27.82 Aligned_cols=148 Identities=9% Similarity=0.059 Sum_probs=75.1
Q ss_pred ceeEEEeCCC--CcEEeccCCcccccceeeEEECCEEEEEcccC--CCCCCCCCccEEEEeCCC--------CeeEEccc
Q psy9754 114 SSVECYDPVA--HTWEDVAPLKIARMGMAVAEINDKIWIAGGYT--GDKMNPVTDKVECYDPRT--------NTWTTLAT 181 (306)
Q Consensus 114 ~~~~~~d~~~--~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~~~d~~~--------~~W~~~~~ 181 (306)
+.++..|... ..|.++. +|. ........++++|+..... .........++...|..+ ..|+.+-.
T Consensus 269 ~~~~~~~~~~~~~~~~~l~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN-MPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEECC-SCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEee-cCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 6677777553 5677773 232 1112456689999976432 110000146788888764 46987412
Q ss_pred ccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEec--ccCCcccccceeee--e-CCEEE
Q psy9754 182 KLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFV--TELVVPRHAHSASV--L-SSQIL 256 (306)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~--~~~p~~~~~~~~~~--~-~~~i~ 256 (306)
+ ...+.-... ...++.|++..-... ...+.++++.++.|... ..+|.. ....... . ++.++
T Consensus 346 ~-~~~~~l~~~-~~~~~~l~~~~~~~~-----------~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 346 P-TANEVFNFI-STTKDRVFLATYDNV-----------VAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEAL 411 (711)
T ss_dssp C-CTTEEEEEE-EECSSCEEEEEEETT-----------EEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEE
T ss_pred C-CCCCeEEEE-EEECCEEEEEEEECC-----------EEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEE
Confidence 2 222222233 333367776542221 25678898888877432 234432 1111111 2 33444
Q ss_pred EE-eCccCccccccceEEEeeccccceec
Q psy9754 257 II-GGVTTVYKRTLKSVECWCFDRQAWIK 284 (306)
Q Consensus 257 v~-GG~~~~~~~~~~~~~~yd~~~~~W~~ 284 (306)
+. .+.... ..++.+|+. ++++.
T Consensus 412 ~~~ss~~~P-----~~~~~~d~~-~~~~~ 434 (711)
T 4hvt_A 412 ITIENSIVP-----PTIYLWVKT-HELKI 434 (711)
T ss_dssp EEEECSSSC-----CEEEEECTT-SCEEE
T ss_pred EEEecCCCC-----CEEEEEeCC-CcEEE
Confidence 43 333322 578888876 55554
No 309
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=56.64 E-value=1.3e+02 Score=28.31 Aligned_cols=146 Identities=10% Similarity=0.003 Sum_probs=69.0
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWT 177 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~ 177 (306)
++++.+.|+.+ ..+.+||..+..-... +.....-..++...+++.+.++.+ +.+..+|+.+.+-.
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D--------~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK--------DTVYVLSLYSQKVL 92 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT--------CEEEEEETTTCSEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc--------CeEEEEECCCCcEE
Confidence 45555566544 3466666655443221 111111122222335434444322 56888898876543
Q ss_pred EcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecc--------cCCccc--ccce
Q psy9754 178 TLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT--------ELVVPR--HAHS 247 (306)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~--------~~p~~~--~~~~ 247 (306)
.. ...+ . .-.++....++..++.|+.+ ..+.+||+.+..-.... ..+... .-.+
T Consensus 93 ~~-~~~~-~-~V~~v~~sp~g~~l~sgs~d-------------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~s 156 (902)
T 2oaj_A 93 TT-VFVP-G-KITSIDTDASLDWMLIGLQN-------------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVS 156 (902)
T ss_dssp EE-EECS-S-CEEEEECCTTCSEEEEEETT-------------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCE
T ss_pred EE-EcCC-C-CEEEEEECCCCCEEEEEcCC-------------CcEEEEECCCCccccceeccccccccccccCCCCeEE
Confidence 22 1111 1 11122233356666666543 56788998876543111 001110 1112
Q ss_pred eeee--CCEEEEEeCccCccccccceEEEeeccccce
Q psy9754 248 ASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQAW 282 (306)
Q Consensus 248 ~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~W 282 (306)
++.. +..++++|+.+ ..+ +||+++++-
T Consensus 157 l~~sp~~~~~l~~g~~d-------g~v-lWd~~~~~~ 185 (902)
T 2oaj_A 157 IQWNPRDIGTVLISYEY-------VTL-TYSLVENEI 185 (902)
T ss_dssp EEEETTEEEEEEEECSS-------CEE-EEETTTTEE
T ss_pred EEEccCCCCEEEEEeCC-------CcE-EEECCCCce
Confidence 2222 23577777655 467 999887654
No 310
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=56.45 E-value=77 Score=25.49 Aligned_cols=173 Identities=9% Similarity=0.040 Sum_probs=86.8
Q ss_pred eceEEEEeCCCCCeeeCCCCCCC--ccceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCc---EEeccCCcccccc
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYP--RKIFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHT---WEDVAPLKIARMG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~--~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w~~~~~~~~~~~~ 138 (306)
...+.++++....-. ..++.+ ....++... ++.||+..-. ...++++++.... +.....+. .-
T Consensus 12 ~~~I~~i~l~~~~~~--~~~~~~~~~~~~~ld~d~~~~~lyw~D~~-----~~~I~r~~~~g~~~~~~~~~~~l~---~p 81 (318)
T 3sov_A 12 RRDLRLVDATNGKEN--ATIVVGGLEDAAAVDFVFSHGLIYWSDVS-----EEAIKRTEFNKTESVQNVVVSGLL---SP 81 (318)
T ss_dssp EEEEEEEETTCTTSC--CEEEEEEEEEEEEEEEEGGGTEEEEEETT-----TTEEEEEETTSSSCCCEEEEECCS---CC
T ss_pred cCeEEEEECCCCceE--EEEEecCCCccEEEEEEeCCCEEEEEECC-----CCcEEEEEccCCCceEEEEcCCCC---Cc
Confidence 356778888765311 111111 111222222 5789998432 2568888887653 11111111 11
Q ss_pred eeeEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEE-eCCEEEEEcCCCCCCCCCc
Q psy9754 139 MAVAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSV-NNEKLYIIGGASQTDATNT 214 (306)
Q Consensus 139 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~-~~~~iyi~GG~~~~~~~~~ 214 (306)
.++++ .++.||+.-.. .+.+.+++++...-+.+. ..+..|+ +.++. .++.||...-..
T Consensus 82 ~glavd~~~g~ly~~d~~--------~~~I~~~~~dG~~~~~l~~~~~~~P~---giavdp~~g~ly~td~~~------- 143 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSE--------TNRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWGE------- 143 (318)
T ss_dssp CEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECSSCSSEE---EEEEEGGGTEEEEEECSS-------
T ss_pred cEEEEEcCCCeEEEEECC--------CCEEEEEECCCCcEEEEEeCCCCCcc---EEEEeCCCCEEEEEecCC-------
Confidence 13333 47899987421 367889998765433331 2223332 33333 248899875211
Q ss_pred ccccccceeeEEECCCCceEecccCCcccccceeeee--CCEEEEEeCccCccccccceEEEeeccc
Q psy9754 215 QKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDR 279 (306)
Q Consensus 215 ~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~ 279 (306)
...+++++++...-+.+..... ..-.++++- +++||+.-... ..++++|++.
T Consensus 144 -----~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~~lY~aD~~~-------~~I~~~d~dG 197 (318)
T 3sov_A 144 -----VPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWADAKL-------NFIHKSNLDG 197 (318)
T ss_dssp -----SCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTS
T ss_pred -----CCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCCEEEEEECCC-------CEEEEEcCCC
Confidence 1568888886443232221111 111233333 67888886443 5677777764
No 311
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=55.53 E-value=1.3e+02 Score=27.69 Aligned_cols=215 Identities=14% Similarity=0.206 Sum_probs=107.2
Q ss_pred ceEEEEeCCCCCeeeCCCCCCCc----cceeeEEE----CCEEEEEccCCCC---CCCceeEEEeCCCCcEEeccC-Cc-
Q psy9754 67 NSVWSFNPNNKQWTQEPNMTYPR----KIFSFVSC----LDKIYAIGGQDCK---TLLSSVECYDPVAHTWEDVAP-LK- 133 (306)
Q Consensus 67 ~~~~~~d~~t~~W~~~~~~~~~~----~~~~~~~~----~~~iyv~GG~~~~---~~~~~~~~~d~~~~~w~~~~~-~~- 133 (306)
..+|+.+-.-.+|+.+.+.+... .....+.+ .+.||+..|.... .....+++=.-.-.+|+++.. ++
T Consensus 45 ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~ 124 (737)
T 2cn3_A 45 GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKM 124 (737)
T ss_dssp SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCC
T ss_pred CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCccc
Confidence 45888887778999987643211 12223333 3588888653211 111334444445668998753 11
Q ss_pred -----ccccceeeEEE---CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcc--------------eeEE
Q psy9754 134 -----IARMGMAVAEI---NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPR--------------YLAT 191 (306)
Q Consensus 134 -----~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~--------------~~~~ 191 (306)
.....+.+++. .+.||+.... -..+++-+=.-.+|+++ ..++... .+..
T Consensus 125 ~~~~~g~~~~~~l~~~p~~~~~v~~g~~~--------g~gl~~S~DgG~tW~~~-~~~~~~~~~~~~p~~~~~~~~~g~~ 195 (737)
T 2cn3_A 125 GGNMPGRSMGERLAIDPNDNRILYLGTRC--------GNGLWRSTDYGVTWSKV-ESFPNPGTYIYDPNFDYTKDIIGVV 195 (737)
T ss_dssp CTTSTTTTSCCCEEECSSCTTCEEEECST--------TCCEEEESSTTSSCEEC-TTCCCCCCCBSCTTSTTTCSBCCEE
T ss_pred CCCcCcccccceEEECCCCCCEEEEeecc--------CCcEEEeCCCCcceecc-cCCCCCcccccCcccccccCCCCEE
Confidence 11111333332 2566664210 02344444345689988 4333210 1122
Q ss_pred EEEEe-C--------CEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CCEEEEEeCc
Q psy9754 192 LVSVN-N--------EKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SSQILIIGGV 261 (306)
Q Consensus 192 ~~~~~-~--------~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~ 261 (306)
.+.+. . +.||+.-.... ..+++=.=.-.+|+.+..+|.....+.++.- ++.+|+..+.
T Consensus 196 ~v~~dp~~~~~~~~~~~v~~~~~~~~------------~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d 263 (737)
T 2cn3_A 196 WVVFDKSSSTPGNPTKTIYVGVADKN------------ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGD 263 (737)
T ss_dssp EEEECGGGSCTTSCCSCEEEEESCSS------------CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEES
T ss_pred EEEcCCCCcccCCCCCEEEEEecCCC------------ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecC
Confidence 23332 1 26666422110 1122221124679999877765443333332 7788886532
Q ss_pred cC-cccc-ccceEEEeeccccceeccCCCCcc----cccceeeEEecC
Q psy9754 262 TT-VYKR-TLKSVECWCFDRQAWIKGVSGLPA----TILGHSSVALPL 303 (306)
Q Consensus 262 ~~-~~~~-~~~~~~~yd~~~~~W~~~~~~~p~----~r~~~~~~~~~~ 303 (306)
.. .+.. ....+++++....+|+. +...|. .+++.+.+.+.+
T Consensus 264 ~~g~y~~~~~g~v~~s~d~G~tW~~-i~~~~~~~~~~~~~~~~i~v~p 310 (737)
T 2cn3_A 264 TCGPYDGNGKGQVWKFNTRTGEWID-ITPIPYSSSDNRFCFAGLAVDR 310 (737)
T ss_dssp SCCSSCCSCCEEEEEEETTTCCEEE-CCSSCTTSTTCCSEEEEEEECT
T ss_pred CCCccccccCceEEEEeCCCCCEEE-ccCCCCCCcccccccccEEEcC
Confidence 21 1111 33678999999999998 444543 245555555544
No 312
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=55.13 E-value=85 Score=25.60 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=53.4
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEEE--CCEEEEEccCCCC----CCCceeEEEeCCCCcEE-eccCCcc----
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVSC--LDKIYAIGGQDCK----TLLSSVECYDPVAHTWE-DVAPLKI---- 134 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~----~~~~~~~~~d~~~~~w~-~~~~~~~---- 134 (306)
...++.||+.+++-.. .++.... ..++.. +..+|+..-.... .....+.+||+.+.+-. +++-.+.
T Consensus 30 d~~v~v~D~~t~~~~~--~i~~g~~-p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLG--MVPTAFN-GHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GCEEEEEETTTCCEEE--EEECCEE-EEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred cCeEEEEECCCCeEEE--EecCCCC-CceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4689999998876432 2333322 233333 3578888531110 11356888999876532 3322111
Q ss_pred cccceeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCee
Q psy9754 135 ARMGMAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW 176 (306)
Q Consensus 135 ~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W 176 (306)
...-+.+++. +..+|+..... .+.+.++|+++.+-
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~-------~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASP-------ATSIGIVDVAKGDY 143 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESS-------SEEEEEEETTTTEE
T ss_pred CCCcceEEECCCCCEEEEECCCC-------CCeEEEEECCCCcE
Confidence 1111222222 45677764211 36789999998864
No 313
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=54.95 E-value=84 Score=25.48 Aligned_cols=16 Identities=13% Similarity=-0.066 Sum_probs=11.1
Q ss_pred ceeEEEeCC-CCcEEec
Q psy9754 114 SSVECYDPV-AHTWEDV 129 (306)
Q Consensus 114 ~~~~~~d~~-~~~w~~~ 129 (306)
..+.+||.. +++.+.+
T Consensus 167 ~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 167 NKLWTHRKLASGEVELV 183 (365)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEECCCCCEEEe
Confidence 568888887 6665544
No 314
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=54.79 E-value=68 Score=24.37 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=36.3
Q ss_pred eEEECCEEEEEccCCCCCCCceeEEEeCCC-CcEE-----eccC---Cccc----ccceeeEE-ECCEEEEEcccCCCCC
Q psy9754 94 FVSCLDKIYAIGGQDCKTLLSSVECYDPVA-HTWE-----DVAP---LKIA----RMGMAVAE-INDKIWIAGGYTGDKM 159 (306)
Q Consensus 94 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~w~-----~~~~---~~~~----~~~~~~~~-~~~~iyv~GG~~~~~~ 159 (306)
+...++++|+|-| +.+|+|+..+ .+-. .+.. +|.. +..++... .++++|+|-|
T Consensus 68 A~~~~~~~yfFkG-------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG------ 134 (219)
T 1hxn_A 68 AFSWEDKLYLIQD-------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG------ 134 (219)
T ss_dssp EEEETTEEEEEET-------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET------
T ss_pred EEEECCcEEEecC-------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC------
Confidence 3335899999977 6788998753 2211 1211 2222 12222221 2689999976
Q ss_pred CCCCccEEEEeCCC
Q psy9754 160 NPVTDKVECYDPRT 173 (306)
Q Consensus 160 ~~~~~~~~~~d~~~ 173 (306)
+..++||..+
T Consensus 135 ----~~ywr~d~~~ 144 (219)
T 1hxn_A 135 ----RRLWWLDLKS 144 (219)
T ss_dssp ----TEEEEEEGGG
T ss_pred ----CEEEEEeCCC
Confidence 5678888654
No 315
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=54.09 E-value=96 Score=25.93 Aligned_cols=75 Identities=8% Similarity=0.055 Sum_probs=43.5
Q ss_pred CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCcccccceeeee-CC--EEEEEeCccCccccccceEE
Q psy9754 197 NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVL-SS--QILIIGGVTTVYKRTLKSVE 273 (306)
Q Consensus 197 ~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~-~~--~i~v~GG~~~~~~~~~~~~~ 273 (306)
.+++|+.-+..... ....+-+.++++|.++.+-. ..++.+..-.++++- ++ .+|+..+.. +++.
T Consensus 291 ~~~lyV~~~~~~~~----~hk~~~~~V~viD~~t~kv~--~~i~vg~~~~~lavs~D~~~~ly~tn~~~-------~~Vs 357 (386)
T 3sjl_D 291 LDRIYLLVDQRDEW----RHKTASRFVVVLDAKTGERL--AKFEMGHEIDSINVSQDEKPLLYALSTGD-------KTLY 357 (386)
T ss_dssp TTEEEEEEEECCTT----CTTSCEEEEEEEETTTCCEE--EEEEEEEEECEEEECSSSSCEEEEEETTT-------TEEE
T ss_pred CCeEEEEecccccc----ccCCCCCEEEEEECCCCeEE--EEEECCCCcceEEECCCCCeEEEEEcCCC-------CeEE
Confidence 48899974321110 00112367999999876644 333334333344443 54 467665544 6899
Q ss_pred Eeeccccceec
Q psy9754 274 CWCFDRQAWIK 284 (306)
Q Consensus 274 ~yd~~~~~W~~ 284 (306)
++|..+++-..
T Consensus 358 ViD~~t~k~~~ 368 (386)
T 3sjl_D 358 IHDAESGEELR 368 (386)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCcEEE
Confidence 99999887643
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=52.52 E-value=50 Score=27.10 Aligned_cols=102 Identities=10% Similarity=0.077 Sum_probs=48.5
Q ss_pred ccEEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecccCCc
Q psy9754 164 DKVECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVTELVV 241 (306)
Q Consensus 164 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~~~p~ 241 (306)
+.++.+|.++.+ |+.-......+..........++.+|++..... ..++.++..++.|+.-..+|.
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~d------------G~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGD------------GNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTT------------TEEEEEETTTEEEEEEEEHHH
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCC------------CEEEEEECCCCcEEeeecccc
Confidence 578888887765 876422101111000000012356666642211 457888877776552222221
Q ss_pred cc-----ccceeeee-------CCEEEEEeCccCccccccceEEEeeccccc--eec
Q psy9754 242 PR-----HAHSASVL-------SSQILIIGGVTTVYKRTLKSVECWCFDRQA--WIK 284 (306)
Q Consensus 242 ~~-----~~~~~~~~-------~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~--W~~ 284 (306)
.. ...+.-++ .+..+++|..+ .+++..|..+++ |+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~-------g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMR-------TIMYTINMLNGEIISAF 137 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEE-------EEEEEEETTTCCEEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecC-------CEEEEEECCCCcEEEEE
Confidence 11 11111112 55566666666 467888887665 654
No 317
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=51.42 E-value=94 Score=27.72 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=57.7
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccC-CcceeEEEEEEeCCEEEEEcCCCCCCCCCccccccccee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLR-YPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDL 223 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~ 223 (306)
+|+....++.+ ..+..+|.+. .+..+....+ ..+..++++.-.++++++.|+.. ..+
T Consensus 96 dG~~LAs~s~d--------g~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-------------GtV 153 (588)
T 2j04_A 96 IDDWMAVLSNN--------GNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-------------GEL 153 (588)
T ss_dssp SSSCEEEEETT--------SCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-------------SEE
T ss_pred CCCEEEEEeCC--------CcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-------------CEE
Confidence 55555554433 4567777444 4555421211 12334555555578888888765 678
Q ss_pred eEEECCCCce-----EecccCCccc-----ccceeeeeCCEEEEEeCccCccccccceEEEeeccccc
Q psy9754 224 DVFVSNEKEW-----KFVTELVVPR-----HAHSASVLSSQILIIGGVTTVYKRTLKSVECWCFDRQA 281 (306)
Q Consensus 224 ~~y~~~~~~W-----~~~~~~p~~~-----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~ 281 (306)
.+||+.++.- ..+..++... .-.+.+...+. ++.++.+ +.+.+||++++.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-------~tVrlWd~~~~~ 213 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-------NSVFSMTVSASS 213 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-------CCEEEECCCSSS
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-------CeEEEEECCCCc
Confidence 8999887642 1122221111 11222333444 6666665 678899987765
No 318
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=50.68 E-value=79 Score=23.93 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=14.9
Q ss_pred CCEEEEEeCccCccccccceEEEeecccc
Q psy9754 252 SSQILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 252 ~~~i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
++++|+|-| +..|.||..++
T Consensus 135 ~g~~YfFkG---------~~ywr~d~~~~ 154 (218)
T 1gen_A 135 NKKTYIFAG---------DKFWRYNEVKK 154 (218)
T ss_dssp TTEEEEEET---------TEEEEEETTTT
T ss_pred CCeEEEEEC---------CEEEEEECccc
Confidence 689999976 45678887654
No 319
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=50.55 E-value=1.4e+02 Score=26.80 Aligned_cols=159 Identities=9% Similarity=-0.006 Sum_probs=87.8
Q ss_pred eceEEEEeCCCCCeeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEecc--CCcccccceee
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVA--PLKIARMGMAV 141 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~--~~~~~~~~~~~ 141 (306)
...++++++.....+.+....... -.+++. .++.||+.... ...++++++....-+.+. .+..+ ...
T Consensus 58 ~~~I~r~~~~g~~~~~v~~~g~~~-P~GlAvD~~~~~LY~tD~~-----~~~I~v~~~dG~~~~~l~~~~l~~P---~~i 128 (628)
T 4a0p_A 58 LKTISRAFMNGSALEHVVEFGLDY-PEGMAVDWLGKNLYWADTG-----TNRIEVSKLDGQHRQVLVWKDLDSP---RAL 128 (628)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSC-CCEEEEETTTTEEEEEETT-----TTEEEEEETTSTTCEEEECSSCCCE---EEE
T ss_pred CCeEEEEECCCCCcEEEEeCCCCC-cceEEEEeCCCEEEEEECC-----CCEEEEEecCCCcEEEEEeCCCCCc---ccE
Confidence 356788887665554432222111 123333 36899998432 367888888765433332 22222 233
Q ss_pred EEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcccc
Q psy9754 142 AEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKM 217 (306)
Q Consensus 142 ~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~ 217 (306)
++. ++.||+.-- .. ...+++.++....-+.+...+..| ..+++. +++||+.....
T Consensus 129 avdp~~G~lY~tD~----g~---~~~I~r~~~dG~~~~~l~~~~~~P----~GlalD~~~~~LY~aD~~~---------- 187 (628)
T 4a0p_A 129 ALDPAEGFMYWTEW----GG---KPKIDRAAMDGSERTTLVPNVGRA----NGLTIDYAKRRLYWTDLDT---------- 187 (628)
T ss_dssp EEETTTTEEEEEEC----SS---SCEEEEEETTSCSCEEEECSCSSE----EEEEEETTTTEEEEEETTT----------
T ss_pred EEccCCCeEEEeCC----CC---CCEEEEEeCCCCceEEEECCCCCc----ceEEEccccCEEEEEECCC----------
Confidence 443 689998741 11 357899988766555542322222 333443 48999986542
Q ss_pred cccceeeEEECCCCceEecc-cCCcccccceeeeeCCEEEEEeC
Q psy9754 218 YSVSDLDVFVSNEKEWKFVT-ELVVPRHAHSASVLSSQILIIGG 260 (306)
Q Consensus 218 ~~~~~~~~y~~~~~~W~~~~-~~p~~~~~~~~~~~~~~i~v~GG 260 (306)
..++++|++...=+.+. .++. -.+++..+++||+.--
T Consensus 188 ---~~I~~~d~dG~~~~v~~~~l~~---P~glav~~~~ly~tD~ 225 (628)
T 4a0p_A 188 ---NLIESSNMLGLNREVIADDLPH---PFGLTQYQDYIYWTDW 225 (628)
T ss_dssp ---TEEEEEETTSCSCEEEEECCSC---EEEEEEETTEEEEEET
T ss_pred ---CEEEEEcCCCCceEEeeccCCC---ceEEEEECCEEEEecC
Confidence 56888888654323222 2222 2356666788888753
No 320
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=49.30 E-value=1.5e+02 Score=26.62 Aligned_cols=130 Identities=10% Similarity=0.070 Sum_probs=70.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccce-eeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGM-AVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
++.||+.-.. ...+++.++....-+.+..- ..... +.++. ++.||+.--.. ...+++.+.+-.
T Consensus 403 ~~~lY~tD~~-----~~~I~v~~~~G~~~~~l~~~--~l~~P~~iavdp~~G~ly~tD~g~-------~~~I~r~~~dG~ 468 (619)
T 3s94_A 403 ARNLYWTDTG-----TDRIEVTRLNGTMRKILISE--DLEEPRAIVLDPMVGYMYWTDWGE-------IPKIERAALDGS 468 (619)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECT--TCCSEEEEEEETTTTEEEEEECSS-------SCEEEEEETTSC
T ss_pred cCcEEEEeCC-----CCcEEEEeCCCCeEEEEEEC--CCCCeeeEEEEcCCCcEEEecCCC-------CCEEEEEccCCC
Confidence 6889988431 35678888776543333211 11122 33333 58999874111 246788876643
Q ss_pred eeEEcc-cccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcccccccceeeEEECCCCceEecc--cCCcccccceee
Q psy9754 175 TWTTLA-TKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNEKEWKFVT--ELVVPRHAHSAS 249 (306)
Q Consensus 175 ~W~~~~-~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~~~W~~~~--~~p~~~~~~~~~ 249 (306)
.-+.+. ..+..| ..+++. +++||+..... ..+++++++...=+.+. .++.| .+++
T Consensus 469 ~~~~l~~~~l~~P----~GlalD~~~~~LY~aD~~~-------------~~I~~~~~dG~~~~~~~~~~l~~P---~gla 528 (619)
T 3s94_A 469 DRVVLVNTSLGWP----NGLALDYDEGKIYWGDAKT-------------DKIEVMNTDGTGRRVLVEDKIPHI---FGFT 528 (619)
T ss_dssp SCEEEECSSCSCE----EEEEEETTTTEEEEEETTT-------------TEEEEEESSSCCCEEEEECCCCSS---CCEE
T ss_pred ccEEEEeCCCCCC----eeeEEcccCCEEEEEECCC-------------CEEEEEecCCCceEEEeccCCCCc---EEEE
Confidence 323331 122222 233443 58999986442 56888888654333222 22222 3566
Q ss_pred eeCCEEEEEeCc
Q psy9754 250 VLSSQILIIGGV 261 (306)
Q Consensus 250 ~~~~~i~v~GG~ 261 (306)
+.+++||+.--.
T Consensus 529 v~~~~ly~tD~~ 540 (619)
T 3s94_A 529 LLGDYVYWTDWQ 540 (619)
T ss_dssp EETTEEEEECTT
T ss_pred EECCEEEEeecC
Confidence 778899988643
No 321
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=47.54 E-value=1.1e+02 Score=24.61 Aligned_cols=121 Identities=9% Similarity=0.015 Sum_probs=60.1
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEccccc-C---Cc-ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccc
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKL-R---YP-RYLATLVSVNNEKLYIIGGASQTDATNTQKMYS 219 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-~---~~-~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~ 219 (306)
++++|+........ ...+..++ +.+-... +.. . .. ..-++++...+++||++.-.... ..
T Consensus 27 ~g~~~v~~~~~~~~----~~~l~~~~--~g~~~~~-p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~--------~~ 91 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP----EMQVAELT--QDGLIPF-PPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQS--------KS 91 (343)
T ss_dssp TSCEEEEECGGGCC----SCSEEEEE--TTEEEES-CCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHH--------TS
T ss_pred CCCEEEEeCCCCCC----ceEEEEEC--CCCeecC-CCcccCcccceeEeeEEEEcCCCcEEEEcCCCCc--------CC
Confidence 68898874321111 13567776 4444333 110 0 01 12233444446899998632100 00
Q ss_pred cceeeEEECCCCceEecccCCc-----ccccceeeee--CCEEEEEeCccCccccccceEEEeeccccc-eec
Q psy9754 220 VSDLDVFVSNEKEWKFVTELVV-----PRHAHSASVL--SSQILIIGGVTTVYKRTLKSVECWCFDRQA-WIK 284 (306)
Q Consensus 220 ~~~~~~y~~~~~~W~~~~~~p~-----~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~~~~-W~~ 284 (306)
...+.+||+++++....-.++. ......+++- ++.+|+...... ....+.+||+++++ |..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~----~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD----DKAALIRVDLQTGLAARV 160 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG----GGCEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC----CCCeEEEEECCCCCEEEE
Confidence 1568999998887443222221 1122344443 468888753110 11578899987554 443
No 322
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.16 E-value=1.2e+02 Score=24.87 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=51.8
Q ss_pred eceEEEEeCC---CCC--eee-CCCCCCC-------cc-ceeeEEE--CCEEEEEccCCCCCCCceeEEEeCCCCc---E
Q psy9754 66 SNSVWSFNPN---NKQ--WTQ-EPNMTYP-------RK-IFSFVSC--LDKIYAIGGQDCKTLLSSVECYDPVAHT---W 126 (306)
Q Consensus 66 ~~~~~~~d~~---t~~--W~~-~~~~~~~-------~~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~---w 126 (306)
.+.+.+||+. +++ |.. +...... +. ...=+++ ++.+||.+.... ..++++++.... |
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVSTF 174 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeee
Confidence 5779999988 543 422 2111111 21 1222233 689999765331 558899998664 4
Q ss_pred EeccCCcccccce-eeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCC
Q psy9754 127 EDVAPLKIARMGM-AVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTN 174 (306)
Q Consensus 127 ~~~~~~~~~~~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~ 174 (306)
-.-.+....+.+. +.+.. +..|++..+ ...+.+||+.+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~---------~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGG---------PRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESS---------SSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcC---------CCeEEEEcCCCC
Confidence 3222222334444 44444 345666544 257899998853
No 323
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=45.49 E-value=1.9e+02 Score=26.81 Aligned_cols=198 Identities=14% Similarity=0.149 Sum_probs=97.0
Q ss_pred eEEEEeCCCCCeeeCCCCCC-----CccceeeEEE---CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCC-cc----
Q psy9754 68 SVWSFNPNNKQWTQEPNMTY-----PRKIFSFVSC---LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPL-KI---- 134 (306)
Q Consensus 68 ~~~~~d~~t~~W~~~~~~~~-----~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~-~~---- 134 (306)
.+++-+-.-.+|+.+...+. .+...+++.. .+.+|+..|.........+++=+-.-.+|+++... +.
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 46666655678998865332 1223333333 25788876632201113444444456789987531 11
Q ss_pred -cc-cceeeEEE---CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccC---CcceeEEEEEEe---CCEEEEE
Q psy9754 135 -AR-MGMAVAEI---NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLR---YPRYLATLVSVN---NEKLYII 203 (306)
Q Consensus 135 -~~-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~---~~~~~~~~~~~~---~~~iyi~ 203 (306)
.+ ....+++. .+.+|+.. . ...+++-+=.-.+|+++ ...+ ........+.++ .+.||+.
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~g~-~--------~~gl~~S~DgG~TW~~~-~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWMGT-R--------TEGIWKSSDRAKTWTNV-TSIPDAFTNGIGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEEEC-S--------SSCEEEESSTTSSCEEE-TTSCCCCSTTTCEEEEEECTTSTTCEEEE
T ss_pred CCccceeEEEEcCCCCCEEEEEe-c--------cCCEEEECCCCcccCCC-ccCccccCCCCCeEEEEECCCCCCEEEEE
Confidence 11 11233443 35666632 1 13455544445689998 4332 111222333332 2467775
Q ss_pred cCCCCCCCCCcccccccceeeEEECC-CCceEecccCCcccc------c----------ceeeee--CCEEEEEeCcc-C
Q psy9754 204 GGASQTDATNTQKMYSVSDLDVFVSN-EKEWKFVTELVVPRH------A----------HSASVL--SSQILIIGGVT-T 263 (306)
Q Consensus 204 GG~~~~~~~~~~~~~~~~~~~~y~~~-~~~W~~~~~~p~~~~------~----------~~~~~~--~~~i~v~GG~~-~ 263 (306)
.... ..++ +..+ -.+|+.+..+|.... . +.+++. ++.||+..+.. .
T Consensus 188 ~~~~-------------~~v~-~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~ 253 (789)
T 1sqj_A 188 ATAP-------------QGMY-VTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPG 253 (789)
T ss_dssp ESST-------------TCEE-EESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCS
T ss_pred EcCC-------------CeEE-EEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCC
Confidence 4321 1122 2222 457998875543220 0 233322 77888874221 1
Q ss_pred ccccccceEEEeeccccceeccCCCCc
Q psy9754 264 VYKRTLKSVECWCFDRQAWIKGVSGLP 290 (306)
Q Consensus 264 ~~~~~~~~~~~yd~~~~~W~~~~~~~p 290 (306)
........+++.+....+|+.+ ..+|
T Consensus 254 p~~g~~g~l~~S~DgG~tW~~~-~~~~ 279 (789)
T 1sqj_A 254 PWGVTFGEVWRQNRTSGAWDDI-TPRV 279 (789)
T ss_dssp SSCCCCCCEEEEETTTCCEEEC-CCCT
T ss_pred CCCCCCceEEEEeCCCCceEEC-cCCC
Confidence 1111235788888889999984 4444
No 324
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=43.62 E-value=1.6e+02 Score=25.55 Aligned_cols=153 Identities=9% Similarity=0.017 Sum_probs=0.0
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcc-cccceeeEEE----------CCEEEEEcccCCC-CCCCCCcc
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKI-ARMGMAVAEI----------NDKIWIAGGYTGD-KMNPVTDK 165 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~-~~~~~~~~~~----------~~~iyv~GG~~~~-~~~~~~~~ 165 (306)
++.||+.-... ..+.++|+.++..+.+..... .........+ ++.||+..-.... .. ...
T Consensus 151 ~~~Lyv~~~~~-----~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~---~~~ 222 (496)
T 3kya_A 151 KDHLYICYDGH-----KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE---SPS 222 (496)
T ss_dssp EEEEEEEEETE-----EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG---EEE
T ss_pred CCEEEEEECCC-----CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc---Cce
Q ss_pred EEEEeCCC-CeeEEcc--cccCCcceeEEEEEEe-CCEEEEEcCCCCCCCCCcccccccceeeEEECC-------CCce-
Q psy9754 166 VECYDPRT-NTWTTLA--TKLRYPRYLATLVSVN-NEKLYIIGGASQTDATNTQKMYSVSDLDVFVSN-------EKEW- 233 (306)
Q Consensus 166 ~~~~d~~~-~~W~~~~--~~~~~~~~~~~~~~~~-~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~-------~~~W- 233 (306)
+++++... ..|.... ...+.-...++++... ++.||+..-.. ..+++||++ +.+-
T Consensus 223 V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~-------------g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 223 VYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEK-------------GQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp EEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTT-------------TEEEEECHHHHHHHHHTTCCC
T ss_pred EEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCC-------------CEEEEEecccccccccCceee
Q ss_pred -----------EecccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeecc
Q psy9754 234 -----------KFVTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 234 -----------~~~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
+.+...+....-..++.. ++. ||+.--.+ ..+++++++
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~-------h~I~kid~d 340 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN-------HYFMRSDYD 340 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT-------TEEEEEEEE
T ss_pred cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC-------CEEEEEecC
No 325
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=41.18 E-value=1.2e+02 Score=23.49 Aligned_cols=95 Identities=6% Similarity=-0.025 Sum_probs=51.4
Q ss_pred CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceee
Q psy9754 145 NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLD 224 (306)
Q Consensus 145 ~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~ 224 (306)
++.||++... ...++.+|++-..+..+ +... ..-..+.+..+++.+++..-.. ..++
T Consensus 38 ~~~L~aV~d~--------~~~I~~ld~~g~v~~~i-~l~g-~~D~EGIa~~~~g~~~vs~E~~-------------~~l~ 94 (255)
T 3qqz_A 38 SNTLFSTINK--------PAAIVEMTTNGDLIRTI-PLDF-VKDLETIEYIGDNQFVISDERD-------------YAIY 94 (255)
T ss_dssp TTEEEEEEET--------TEEEEEEETTCCEEEEE-ECSS-CSSEEEEEECSTTEEEEEETTT-------------TEEE
T ss_pred CCEEEEEECC--------CCeEEEEeCCCCEEEEE-ecCC-CCChHHeEEeCCCEEEEEECCC-------------CcEE
Confidence 5789988653 25799999996667776 2211 1223345555667766653221 4566
Q ss_pred EEECCCCc--eE--ecc----cCCcccccceeeee--CCEEEEEeCcc
Q psy9754 225 VFVSNEKE--WK--FVT----ELVVPRHAHSASVL--SSQILIIGGVT 262 (306)
Q Consensus 225 ~y~~~~~~--W~--~~~----~~p~~~~~~~~~~~--~~~i~v~GG~~ 262 (306)
+|+...+. |. ... ..+....+-+++.- ++++|++-...
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 77665443 32 111 11222333344443 45788876544
No 326
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=38.49 E-value=2.4e+02 Score=25.90 Aligned_cols=98 Identities=6% Similarity=0.016 Sum_probs=52.4
Q ss_pred eceEEEEeCCCC--Ce--eeCCCCCCCccceeeE-EECCEEEEEccCCCCCCCceeEEEeCCC-CcEEe-ccCCcccccc
Q psy9754 66 SNSVWSFNPNNK--QW--TQEPNMTYPRKIFSFV-SCLDKIYAIGGQDCKTLLSSVECYDPVA-HTWED-VAPLKIARMG 138 (306)
Q Consensus 66 ~~~~~~~d~~t~--~W--~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~w~~-~~~~~~~~~~ 138 (306)
.+.++.+|..+. ++ +.+.+-.. ....+.. ..++.||+..-.+ ......++.+|..+ ..|+. +-+......-
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l 371 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFM 371 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEE
Confidence 457888888765 45 54432211 1112222 2267888886543 11235788888876 57876 4222211111
Q ss_pred eeeEEECCEEEEEcccCCCCCCCCCccEEEEeC
Q psy9754 139 MAVAEINDKIWIAGGYTGDKMNPVTDKVECYDP 171 (306)
Q Consensus 139 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~ 171 (306)
......++.|++..-... ...++++|+
T Consensus 372 ~~~~~~~~~lv~~~~~~g------~~~l~~~dl 398 (751)
T 2xe4_A 372 ESIAVRSNYLVVAGRRAG------LTRIWTMMA 398 (751)
T ss_dssp EEEEECSSEEEEEEEETT------EEEEEEEEC
T ss_pred EEEEEECCEEEEEEEeCC------EEEEEEEec
Confidence 223334677777654332 457888886
No 327
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=38.45 E-value=2.4e+02 Score=25.88 Aligned_cols=103 Identities=11% Similarity=0.102 Sum_probs=56.8
Q ss_pred eceEEEEeCCC--CCeeeCCCCCCCccceeeEEECCEEEEEccCCC-----CCCCceeEEEeCCC--------CcEEe-c
Q psy9754 66 SNSVWSFNPNN--KQWTQEPNMTYPRKIFSFVSCLDKIYAIGGQDC-----KTLLSSVECYDPVA--------HTWED-V 129 (306)
Q Consensus 66 ~~~~~~~d~~t--~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~~~d~~~--------~~w~~-~ 129 (306)
.+.++..+... ++|..+. +| +....+...++.+|+....+- ......+...|..+ ..|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKIN-MP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEECC-SC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEee-cC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 36677777653 5677772 23 222223456889999764331 11235577777654 46876 3
Q ss_pred cCCcccccceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEE
Q psy9754 130 APLKIARMGMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTT 178 (306)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~ 178 (306)
.+-. .+.-......++.|++..-... ...+.++|+.+..|+.
T Consensus 345 ~~~~-~~~l~~~~~~~~~l~~~~~~~~------~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 345 TPTA-NEVFNFISTTKDRVFLATYDNV------VAKVVTFTLENEQWTK 386 (711)
T ss_dssp CCCT-TEEEEEEEECSSCEEEEEEETT------EEEEEEECEETTEECC
T ss_pred CCCC-CCeEEEEEEECCEEEEEEEECC------EEEEEEEECCCCceEE
Confidence 3322 2222233445667766543221 4578899988888743
No 328
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=36.85 E-value=78 Score=27.64 Aligned_cols=22 Identities=14% Similarity=0.060 Sum_probs=13.3
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCC
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAH 124 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~ 124 (306)
.+..++.|+.+ ..+.+||..+.
T Consensus 276 ~~~~lasgs~D-----gtV~lWD~~~~ 297 (524)
T 2j04_B 276 SPTTVVCGFKN-----GFVAEFDLTDP 297 (524)
T ss_dssp SSSEEEEEETT-----SEEEEEETTBC
T ss_pred CCCeEEEEeCC-----CEEEEEECCCC
Confidence 34445555544 56778888764
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=36.44 E-value=50 Score=27.11 Aligned_cols=99 Identities=7% Similarity=0.016 Sum_probs=50.0
Q ss_pred eceEEEEeCCCCC--eeeCCC----CCCCccceeeEEECCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCccc----
Q psy9754 66 SNSVWSFNPNNKQ--WTQEPN----MTYPRKIFSFVSCLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIA---- 135 (306)
Q Consensus 66 ~~~~~~~d~~t~~--W~~~~~----~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~---- 135 (306)
...++.+|.++++ |+.-.. +-..+.... ..++.+|++..... ..++.+|..++.|+---.++..
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~--~~~~~~~vv~p~~d----G~l~a~~~~~G~~~~~~~~~~lv~~S 92 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR--LETYETLIIEPFGD----GNIYYFNAHQGLQKLPLSIRQLVSTS 92 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCT--TTSSEEEEECCSTT----TEEEEEETTTEEEEEEEEHHHHHTTC
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCcc--ccCCcEEEEEECCC----CEEEEEECCCCcEEeeeccccceecc
Confidence 3568888988875 875432 111111111 12557777743222 5678888887765422111111
Q ss_pred -ccceee-EE-------ECCEEEEEcccCCCCCCCCCccEEEEeCCCCe--eEEc
Q psy9754 136 -RMGMAV-AE-------INDKIWIAGGYTGDKMNPVTDKVECYDPRTNT--WTTL 179 (306)
Q Consensus 136 -~~~~~~-~~-------~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~ 179 (306)
....+. ++ .++.+|+ |.. ...++.+|..+.+ |+.-
T Consensus 93 P~~~~~~pvv~~~~~~~~~g~Vy~-Gs~--------~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 93 PLHLKTNIVVNDSGKIVEDEKVYT-GSM--------RTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp SEEEECC----------CCEEEEE-CEE--------EEEEEEEETTTCCEEEEES
T ss_pred ccccCCCceeecccccccCCEEEE-Eec--------CCEEEEEECCCCcEEEEEe
Confidence 111111 11 3444444 432 3678899988776 7654
No 330
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=33.07 E-value=2e+02 Score=23.59 Aligned_cols=186 Identities=8% Similarity=0.032 Sum_probs=0.0
Q ss_pred eEEEEeCC--CCCeeeCCCCC-----CCccceeeEEECC-----EEEEEccCCCCCCCceeEEEeCCCCcEEec---cCC
Q psy9754 68 SVWSFNPN--NKQWTQEPNMT-----YPRKIFSFVSCLD-----KIYAIGGQDCKTLLSSVECYDPVAHTWEDV---APL 132 (306)
Q Consensus 68 ~~~~~d~~--t~~W~~~~~~~-----~~~~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~---~~~ 132 (306)
.+++||+. +.+-+++.... ..-.-|.+....+ .|||+.-. .......++.+++.++..+.+ ...
T Consensus 84 ~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~-~~~s~ielf~~d~~~~~~~~~~~~~g~ 162 (355)
T 3sre_A 84 KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP-GSSSTVEVFKFQEEEKSLLHLKTIRHK 162 (355)
T ss_dssp EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS-TTCCEEEEEEEETTTTEEEEEEEECCT
T ss_pred eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC-CCCCeEEEEEEECCCCEEEEEeccccC
Q ss_pred cccccceeeEEECCEEEEEcccCCCC---------CCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCC-EEEE
Q psy9754 133 KIARMGMAVAEINDKIWIAGGYTGDK---------MNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNE-KLYI 202 (306)
Q Consensus 133 ~~~~~~~~~~~~~~~iyv~GG~~~~~---------~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~iyi 202 (306)
+..+..-.++.-++.+|+-+...... .......+++||+. +.+.+...+..|- +.+...++ .+|+
T Consensus 163 ~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pN---Gia~spDg~~lYv 237 (355)
T 3sre_A 163 LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFAN---GINISPDGKYVYI 237 (355)
T ss_dssp TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEE---EEEECTTSSEEEE
T ss_pred CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccC---cceECCCCCEEEE
Q ss_pred EcCCCCCCCCCcccccccceeeEEECC-CCceEecccCCcccccceeeee-C-CEEEEEeCccCccccccceEEEeecc
Q psy9754 203 IGGASQTDATNTQKMYSVSDLDVFVSN-EKEWKFVTELVVPRHAHSASVL-S-SQILIIGGVTTVYKRTLKSVECWCFD 278 (306)
Q Consensus 203 ~GG~~~~~~~~~~~~~~~~~~~~y~~~-~~~W~~~~~~p~~~~~~~~~~~-~-~~i~v~GG~~~~~~~~~~~~~~yd~~ 278 (306)
..-.. ..+++|+.+ ..+......+..+..--+++.- + |.+|+...... ..+.+|+|+
T Consensus 238 adt~~-------------~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g------~~v~~~~P~ 297 (355)
T 3sre_A 238 AELLA-------------HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNG------MRIFFYDAE 297 (355)
T ss_dssp EEGGG-------------TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCH------HHHHSCCTT
T ss_pred EeCCC-------------CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCc------eEEEEECCC
No 331
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.33 E-value=2.1e+02 Score=23.55 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=13.0
Q ss_pred eEEEEEEeCCEEEEEcC
Q psy9754 189 LATLVSVNNEKLYIIGG 205 (306)
Q Consensus 189 ~~~~~~~~~~~iyi~GG 205 (306)
.|+++...++++|.+|-
T Consensus 169 ~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 169 AHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SEEEEEETTSCEEEEEC
T ss_pred CeEEEEeCCCeEEEeCC
Confidence 46666666799999984
No 332
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=31.99 E-value=2.8e+02 Score=24.85 Aligned_cols=131 Identities=5% Similarity=-0.008 Sum_probs=60.9
Q ss_pred eceEEEEeCCCCCe---eeCCCCC----CCccceeeEEE-CCEEEEEccCCCCCCCceeEEEe----CCCCcEEeccC--
Q psy9754 66 SNSVWSFNPNNKQW---TQEPNMT----YPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECYD----PVAHTWEDVAP-- 131 (306)
Q Consensus 66 ~~~~~~~d~~t~~W---~~~~~~~----~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d----~~~~~w~~~~~-- 131 (306)
...++.+|..+++- ..+.... .......++.. ++++++.... .......++++| ..++++..+-.
T Consensus 223 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~ 301 (719)
T 1z68_A 223 VVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHI 301 (719)
T ss_dssp EEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEE
T ss_pred eeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEecc
Confidence 34788899887652 2332210 11111222222 6676655221 112235688889 77776554431
Q ss_pred --Ccccccc-----eeeEEECC-EEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEE
Q psy9754 132 --LKIARMG-----MAVAEIND-KIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYII 203 (306)
Q Consensus 132 --~~~~~~~-----~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~ 203 (306)
....... .....-++ .|++....... ...++.+|+.+.....+ ......... .... .++.||+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g-----~~~l~~~~~~~~~~~~l-t~~~~~v~~-~~~~-d~~~i~~~ 373 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG-----YKHIHYIKDTVENAIQI-TSGKWEAIN-IFRV-TQDSLFYS 373 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS-----CEEEEEESSCSTTCEEC-SCSSSCEEE-EEEE-CSSEEEEE
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEccCC-----ceEEEEEECCCCceEec-ccCceEEEE-EEEE-eCCEEEEE
Confidence 1111111 11122233 45553322211 35789999888776666 322221111 1222 44667666
Q ss_pred cC
Q psy9754 204 GG 205 (306)
Q Consensus 204 GG 205 (306)
+.
T Consensus 374 ~~ 375 (719)
T 1z68_A 374 SN 375 (719)
T ss_dssp ES
T ss_pred Ee
Confidence 54
No 333
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=29.83 E-value=2.4e+02 Score=23.41 Aligned_cols=17 Identities=24% Similarity=0.212 Sum_probs=12.8
Q ss_pred eEEEEEEeCCEEEEEcC
Q psy9754 189 LATLVSVNNEKLYIIGG 205 (306)
Q Consensus 189 ~~~~~~~~~~~iyi~GG 205 (306)
.|+++...++++|.+|-
T Consensus 235 ~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGW 251 (406)
T ss_dssp SEEEEEETTCCEEEEEC
T ss_pred CcEEEEcCCCCEEEeeC
Confidence 45666666799999984
No 334
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=28.62 E-value=3.2e+02 Score=24.43 Aligned_cols=165 Identities=7% Similarity=0.084 Sum_probs=86.4
Q ss_pred CEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCcccccceeeEE----ECCEEEEEcccCC---------CCCCCCCcc
Q psy9754 99 DKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLKIARMGMAVAE----INDKIWIAGGYTG---------DKMNPVTDK 165 (306)
Q Consensus 99 ~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~----~~~~iyv~GG~~~---------~~~~~~~~~ 165 (306)
..+||-.. ....+.+.|+.+.+-.++-.+|....-|+++. ..+++|+.+-... ...+...+.
T Consensus 102 ~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 102 RFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 36777422 23779999999998666546665555556554 3467777642211 111112467
Q ss_pred EEEEeCCCCe--eEEcccccCCcceeEEEEEEeCCEEEEEcCCCCCCCC-------------------------Cccccc
Q psy9754 166 VECYDPRTNT--WTTLATKLRYPRYLATLVSVNNEKLYIIGGASQTDAT-------------------------NTQKMY 218 (306)
Q Consensus 166 ~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~~~~~~~-------------------------~~~~~~ 218 (306)
+.+.|.++.+ |+-.... .+.. ..+......+|+.- .+.+... ......
T Consensus 177 vtvID~~t~~v~~qI~Vgg--~pd~--~~~spdGk~~~vt~-~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG--NLDN--CDADYEGKWAFSTS-YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEETTTTEEEEEEEESS--CCCC--EEECSSSSEEEEEE-SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred EEEEECCCCeEEEEEEeCC--Cccc--eEECCCCCEEEEEe-cCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 8899999876 5543111 2211 11111112333332 1111000 000001
Q ss_pred ccceeeEEECCCCceEe-cccCCcccccceeeee-CCE-EEEEeCccCccccccceEEEeecccc
Q psy9754 219 SVSDLDVFVSNEKEWKF-VTELVVPRHAHSASVL-SSQ-ILIIGGVTTVYKRTLKSVECWCFDRQ 280 (306)
Q Consensus 219 ~~~~~~~y~~~~~~W~~-~~~~p~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~~~ 280 (306)
....+-+.|..+.+.+. +..+|.+..-|++..- ||+ +|+.+... +.+.+||.++.
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-------~~VsVid~~~~ 309 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-------PTVTVLDVTRF 309 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-------SBEEEEEGGGH
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-------CeEEEEECccc
Confidence 12457788887633333 3455666666777665 554 55555444 68999999876
No 335
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.77 E-value=3.3e+02 Score=24.32 Aligned_cols=161 Identities=9% Similarity=0.037 Sum_probs=80.2
Q ss_pred eceEEEEeCCCCC-eeeCCCCCCCccceeeEE--ECCEEEEEccCCCCCCCceeEEEeCCCCcEEecc--CCccccccee
Q psy9754 66 SNSVWSFNPNNKQ-WTQEPNMTYPRKIFSFVS--CLDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVA--PLKIARMGMA 140 (306)
Q Consensus 66 ~~~~~~~d~~t~~-W~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~--~~~~~~~~~~ 140 (306)
.+.++++++.... ++.+-.... ..-..++. .++.||+.... ...+.++++....-+.+. .+..++ .
T Consensus 61 ~~~I~r~~~~g~~~~~~v~~~~~-~~P~GlAvD~~~~~ly~~d~~-----~~~I~v~~~dG~~~~~l~~~~l~~P~---~ 131 (619)
T 3s94_A 61 EEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQPR---A 131 (619)
T ss_dssp TTEEEEEEC-----CEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSCCC---C
T ss_pred CCeEEEEEccCCCceEEEEeCCC-CCcCeEEEEecCCEEEEEeCC-----CCEEEEEECCCCCEEEEEeCCCCCCc---e
Confidence 3567777775432 222211111 11223333 26899998532 367888888765533332 222222 3
Q ss_pred eEE--ECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcc-cccCCcceeEEEEEEe--CCEEEEEcCCCCCCCCCcc
Q psy9754 141 VAE--INDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLA-TKLRYPRYLATLVSVN--NEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 141 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~--~~~iyi~GG~~~~~~~~~~ 215 (306)
.++ .++.||+..- .. ...+++.+++-..-+.+. ..+.. ...+++. +++||+.....
T Consensus 132 Iavdp~~g~ly~tD~----g~---~~~I~r~~~dG~~~~~l~~~~~~~----P~Glald~~~~~LY~aD~~~-------- 192 (619)
T 3s94_A 132 IALDPSSGFMYWTDW----GE---VPKIERAGMDGSSRFIIINSEIYW----PNGLTLDYEEQKLYWADAKL-------- 192 (619)
T ss_dssp EEEETTTTEEEEEEC----SS---SCEEEEEETTSCSCEEEECSSCSS----EEEEEEETTTTEEEEEETTT--------
T ss_pred EEEecCCCeEEEecc----CC---CCEEEEEECCCCceEEEEeCCCCC----CcEEEEEccCCEEEEEeCCC--------
Confidence 333 3689998751 11 257888887754444431 12222 2333443 58999986542
Q ss_pred cccccceeeEEECCCCceEecccCCcccccceeeeeCCEEEEEeC
Q psy9754 216 KMYSVSDLDVFVSNEKEWKFVTELVVPRHAHSASVLSSQILIIGG 260 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG 260 (306)
..++++|++...=+.+... ....-.+++..++.||+..-
T Consensus 193 -----~~I~~~~~dG~~~~~~~~~-~~~~P~gi~~~~~~ly~td~ 231 (619)
T 3s94_A 193 -----NFIHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYWTDW 231 (619)
T ss_dssp -----CCEEEESSSCCEEC----------CCCEEESSSEEEEECT
T ss_pred -----CeEEEecCCCCccEEEEeC-CCCCceEEEEeCCEEEEecC
Confidence 5688888865432222210 11122455666778888753
No 336
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=27.53 E-value=2.2e+02 Score=22.26 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=28.3
Q ss_pred ceeeEEECCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccCCcceeEEEEEEeCCEEEEEcCC
Q psy9754 138 GMAVAEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGGA 206 (306)
Q Consensus 138 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG~ 206 (306)
.|+++.-++++|.+|-.....-. .... .......+ ..-..|+++. .++++|.+|--
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg-~p~~------~~~~v~~i-----~~G~~hs~al-~~G~v~~wG~n 206 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTT-VPAE------AQSGVDDV-----AGGIFHSLAL-KDGKVIAWGDN 206 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTS-CCGG------GGSSEEEE-----EECSSEEEEE-ETTEEEEEECC
T ss_pred CEEEEEECCEEEEecCCCCCCCC-Ccee------cCCCeEEE-----EecCCEEEEE-ECCeEEEEECC
Confidence 34445558899998864432210 0000 01123333 1123455556 67999999854
No 337
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=26.01 E-value=2.8e+02 Score=22.97 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=13.0
Q ss_pred eEEEEEEeCCEEEEEcC
Q psy9754 189 LATLVSVNNEKLYIIGG 205 (306)
Q Consensus 189 ~~~~~~~~~~~iyi~GG 205 (306)
.|+++...++++|.+|-
T Consensus 287 ~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGW 303 (406)
T ss_dssp SEEEEEETTSCEEEEEC
T ss_pred CEEEEEcCCCeEEEeeC
Confidence 46666777799999984
No 338
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=24.86 E-value=3.3e+02 Score=23.39 Aligned_cols=70 Identities=13% Similarity=0.072 Sum_probs=38.4
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCC----cEEeccC---C----cccccceeeEEECCEEEEEc-ccCCCCCCCCCcc
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAH----TWEDVAP---L----KIARMGMAVAEINDKIWIAG-GYTGDKMNPVTDK 165 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~----~w~~~~~---~----~~~~~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~ 165 (306)
..++|+-|..+ +.++++|..++ +-.+.-. + ..++-++..|.-++ |||.. |..... ..+.
T Consensus 95 r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~---~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGE---GPGG 165 (462)
T ss_dssp SCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSC---SCCE
T ss_pred CCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCC---CCCe
Confidence 34666665533 77999998766 3332221 1 12232233344456 87753 222222 1478
Q ss_pred EEEEeCCCCee
Q psy9754 166 VECYDPRTNTW 176 (306)
Q Consensus 166 ~~~~d~~~~~W 176 (306)
+..+|.++.+-
T Consensus 166 v~vlD~~T~~v 176 (462)
T 2ece_A 166 ILMLDHYSFEP 176 (462)
T ss_dssp EEEECTTTCCE
T ss_pred EEEEECCCCeE
Confidence 99999998763
No 339
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=24.18 E-value=2.9e+02 Score=22.51 Aligned_cols=143 Identities=10% Similarity=0.079 Sum_probs=72.7
Q ss_pred eceEEEEeCCCCCeeeCCCCC------CCccc-eeeEE----ECCEEEEEccC--CCC------CCCceeEEEeCC---C
Q psy9754 66 SNSVWSFNPNNKQWTQEPNMT------YPRKI-FSFVS----CLDKIYAIGGQ--DCK------TLLSSVECYDPV---A 123 (306)
Q Consensus 66 ~~~~~~~d~~t~~W~~~~~~~------~~~~~-~~~~~----~~~~iyv~GG~--~~~------~~~~~~~~~d~~---~ 123 (306)
...+..+|+..+.-..+ ..+ .+... .++.. -++.|+++.-. ... .....+.+||+. +
T Consensus 34 ~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~t 112 (334)
T 2p9w_A 34 KGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSEN 112 (334)
T ss_dssp TTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTT
T ss_pred CCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCC
Confidence 46788899886654444 222 12222 33333 14688885210 000 124678899988 5
Q ss_pred Cc--EE-eccCCccc-------ccc-eeeEEE--CCEEEEEcccCCCCCCCCCccEEEEeCCCCe---eEEcccccCCcc
Q psy9754 124 HT--WE-DVAPLKIA-------RMG-MAVAEI--NDKIWIAGGYTGDKMNPVTDKVECYDPRTNT---WTTLATKLRYPR 187 (306)
Q Consensus 124 ~~--w~-~~~~~~~~-------~~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~ 187 (306)
++ |. .++..... +.. +.-..+ +|.+||.+... ...|+++++.... |-.- .+....+
T Consensus 113 g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-------~~~I~rV~pdG~~~~~~~~~-~~~~~~~ 184 (334)
T 2p9w_A 113 SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-------MPAIARVSADGKTVSTFAWE-SGNGGQR 184 (334)
T ss_dssp CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-------SCEEEEECTTSCCEEEEEEC-CCCSSSC
T ss_pred CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-------CCeEEEEeCCCCEEeeeeec-CCCcccc
Confidence 54 43 22221111 221 212222 57899976532 2568999988553 5332 2222233
Q ss_pred ee-EEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCC
Q psy9754 188 YL-ATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNE 230 (306)
Q Consensus 188 ~~-~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~ 230 (306)
.+ .+++...+++++++.... ..++++|+.+
T Consensus 185 ~G~nGIv~~pdg~~Liv~~~~-------------g~L~~fD~~~ 215 (334)
T 2p9w_A 185 PGYSGITFDPHSNKLIAFGGP-------------RALTAFDVSK 215 (334)
T ss_dssp CSCSEEEEETTTTEEEEESSS-------------SSEEEEECSS
T ss_pred cCcceEEEeCCCCEEEEEcCC-------------CeEEEEcCCC
Confidence 33 345555456544443322 5678898874
No 340
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=23.98 E-value=2.9e+02 Score=22.35 Aligned_cols=122 Identities=6% Similarity=-0.055 Sum_probs=59.2
Q ss_pred CCEEEEEccCCCCCCCceeEEEeCCCCcEEeccCCc----ccccceeeEEEC-----CEEEEEcccCCCCCCCCCccEEE
Q psy9754 98 LDKIYAIGGQDCKTLLSSVECYDPVAHTWEDVAPLK----IARMGMAVAEIN-----DKIWIAGGYTGDKMNPVTDKVEC 168 (306)
Q Consensus 98 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~w~~~~~~~----~~~~~~~~~~~~-----~~iyv~GG~~~~~~~~~~~~~~~ 168 (306)
++.|||.-- ...+.+++ +.+.+.+..++ ....-+.++... +.||+.--..... ..+.+.+
T Consensus 41 dG~l~V~e~------~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~---~~~~v~r 109 (352)
T 2ism_A 41 DGGMLIAER------PGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG---LRNQVVR 109 (352)
T ss_dssp TSCEEEEET------TTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS---SEEEEEE
T ss_pred CCeEEEEeC------CCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC---CccEEEE
Confidence 567777732 14577776 34444433322 122334455554 4899875322111 1367889
Q ss_pred EeCCCCee---EEcccccCC--c--ceeEEEEEEeCCEEEEEcCCCCCCCCCcccccccceeeEEECCC
Q psy9754 169 YDPRTNTW---TTLATKLRY--P--RYLATLVSVNNEKLYIIGGASQTDATNTQKMYSVSDLDVFVSNE 230 (306)
Q Consensus 169 ~d~~~~~W---~~~~~~~~~--~--~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~~y~~~~ 230 (306)
|+....+. +.+....+. . .....++.-.++.||+.-|.................+.+++++.
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 98776533 222111221 1 12234444457899998765332110000011224678888764
No 341
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=23.05 E-value=2.9e+02 Score=24.37 Aligned_cols=33 Identities=9% Similarity=0.132 Sum_probs=20.0
Q ss_pred CCCeeEEcccccCCcceeEEEEEEeCCEEEEEcC
Q psy9754 172 RTNTWTTLATKLRYPRYLATLVSVNNEKLYIIGG 205 (306)
Q Consensus 172 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyi~GG 205 (306)
.-.+|+.. ..+......+.++...+++|+++.-
T Consensus 198 ~G~TW~~~-~~~~~~~~~~~v~~~~dG~l~~~~r 230 (601)
T 1w8o_A 198 HGRTWRAG-EAVGVGMDENKTVELSDGRVLLNSR 230 (601)
T ss_dssp TTSSCEEC-CCBCSSCCSEEEEECTTSCEEEEEC
T ss_pred CCcCccCC-CCCCCCCCcCEEEEeCCCEEEEEEe
Confidence 35679987 4433333344556666788888653
No 342
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.72 E-value=4.1e+02 Score=23.71 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=12.5
Q ss_pred ceeeEEECCCCceEecc
Q psy9754 221 SDLDVFVSNEKEWKFVT 237 (306)
Q Consensus 221 ~~~~~y~~~~~~W~~~~ 237 (306)
..++.+|+.+.....+.
T Consensus 337 ~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 337 KHIHYIKDTVENAIQIT 353 (719)
T ss_dssp EEEEEESSCSTTCEECS
T ss_pred eEEEEEECCCCceEecc
Confidence 56889998877765554
No 343
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=22.43 E-value=5.5e+02 Score=25.01 Aligned_cols=146 Identities=13% Similarity=0.191 Sum_probs=72.7
Q ss_pred EEECCEEEEEcccCCCCCCCCCccEEEEeCCCCee-EEccc---ccCCcceeEEEEEE--eCCEEEEEcCCCCCCCCCcc
Q psy9754 142 AEINDKIWIAGGYTGDKMNPVTDKVECYDPRTNTW-TTLAT---KLRYPRYLATLVSV--NNEKLYIIGGASQTDATNTQ 215 (306)
Q Consensus 142 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~---~~~~~~~~~~~~~~--~~~~iyi~GG~~~~~~~~~~ 215 (306)
....+.+ ++|.-..... ...++.|+.....| ..... .......+.+++.. +....+++|.-...
T Consensus 340 ~~t~d~~-~~GapG~~~w---~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~~~------ 409 (1095)
T 3k6s_A 340 VFTPDGP-VLGAVGSFTW---SGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQ------ 409 (1095)
T ss_dssp ECCTTCC-EEEESCSTTT---TBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETTGG------
T ss_pred eecCCcc-eEcccccCCc---cceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccccc------
Confidence 3334444 7775433332 56788887665443 33211 11122223333221 22345566643211
Q ss_pred cccccceeeEEECCCCceEecccCC---c-ccccceeeee----C--CEEEEEeCccCccccccceEEEeeccc--ccee
Q psy9754 216 KMYSVSDLDVFVSNEKEWKFVTELV---V-PRHAHSASVL----S--SQILIIGGVTTVYKRTLKSVECWCFDR--QAWI 283 (306)
Q Consensus 216 ~~~~~~~~~~y~~~~~~W~~~~~~p---~-~~~~~~~~~~----~--~~i~v~GG~~~~~~~~~~~~~~yd~~~--~~W~ 283 (306)
....+++|......|.....+. . ..++.+++.. | +.++++|.-..........+++|.-.. ..|.
T Consensus 410 ---~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~ 486 (1095)
T 3k6s_A 410 ---HTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWW 486 (1095)
T ss_dssp ---GTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCC
T ss_pred ---ccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCccee
Confidence 1256888988877888654332 1 2344555543 2 257777743321112336789986543 4586
Q ss_pred ccCCCC------cccccceeeEEe
Q psy9754 284 KGVSGL------PATILGHSSVAL 301 (306)
Q Consensus 284 ~~~~~~------p~~r~~~~~~~~ 301 (306)
. ...+ +..|++++.+.+
T Consensus 487 ~-~~~l~g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 487 C-DAVLYGEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp S-CSSCCCCCSCSSCCBTSCEEEE
T ss_pred e-eEEeecccCCccccCccceEee
Confidence 4 2222 356778777764
No 344
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=22.20 E-value=2e+02 Score=25.42 Aligned_cols=125 Identities=8% Similarity=0.095 Sum_probs=55.5
Q ss_pred CCeeeCCCCCCCccceeeEEE-CCEEEEEccCCCCCCCceeEEE-eCC-CCcEEecc---CCcccccceeeEEE------
Q psy9754 77 KQWTQEPNMTYPRKIFSFVSC-LDKIYAIGGQDCKTLLSSVECY-DPV-AHTWEDVA---PLKIARMGMAVAEI------ 144 (306)
Q Consensus 77 ~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~-d~~-~~~w~~~~---~~~~~~~~~~~~~~------ 144 (306)
.+|+....++.......++.. +++|+++.-..... ....++ ... ..+|+... .++.+.....+..+
T Consensus 200 ~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~--~~~~~~~S~DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~ 277 (601)
T 1w8o_A 200 RTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARS--GYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPA 277 (601)
T ss_dssp SSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCC--SEEEEEEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCT
T ss_pred cCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCC--CCEEEEEEcCCCCCCCCCeecCcCCCCCccceEEEecccccC
Confidence 569887655443344555555 67888865332111 122222 222 35788753 23332222222211
Q ss_pred ---CCEEEEEcccCCCCCCCCCccEEEEeCCCCeeEEcccccC-CcceeEEEEEEeCCEEEEEcC
Q psy9754 145 ---NDKIWIAGGYTGDKMNPVTDKVECYDPRTNTWTTLATKLR-YPRYLATLVSVNNEKLYIIGG 205 (306)
Q Consensus 145 ---~~~iyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~iyi~GG 205 (306)
++.+.++......... ....+..-.-.-.+|+.. ..+. ....+..++...++.|+++.-
T Consensus 278 ~~~~~~~l~~~~~~~~~~R-~~~~l~~S~D~G~tW~~~-~~l~~~~~~Y~~l~~~~dg~i~~~ye 340 (601)
T 1w8o_A 278 GSARAKVLLFSNAASQTSR-SQGTIRMSCDDGQTWPVS-KVFQPGSMSYSTLTALPDGTYGLLYE 340 (601)
T ss_dssp TCSGGGCEEEEEECCSSSS-EEEEEEEESSTTSCCCEE-EEEEEEECCCEEEEECTTSCEEEEEC
T ss_pred CCCCCCEEEEECCCCCCcc-cceEEEEeCCCCCCCCCc-eEeCCCCCCCCeEEEcCCCeEEEEEe
Confidence 2233344332211110 011233332345578765 2221 122344566666788888754
Done!