BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9757
(659 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U518|ASPG_DIRIM L-asparaginase OS=Dirofilaria immitis PE=1 SV=1
Length = 590
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/581 (46%), Positives = 367/581 (63%), Gaps = 5/581 (0%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNV--LVL 131
E+ VLVLYTGGTIGM+ + G P + L IR+ LL D Y D + L
Sbjct: 5 EAHVLVLYTGGTIGMKYID-GVYQPEANYLLHAIRDLSLLNDDDYVSTYYSDAEIRPYCL 63
Query: 132 PRVKDTR-RVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYT 190
P ++ ++ RV+Y ++EY PLLDSS+M WI I DI+ Y+ Y GFVILHGTDTL+YT
Sbjct: 64 PPLQHSKKRVVYWMIEYDPLLDSSDMTFDDWIHIGKDIQRAYDQYVGFVILHGTDTLAYT 123
Query: 191 ASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIR 250
A ALSFMLEN+ KP+++TG+QI + ++RSDG N IGALI+A NYDIPEVTVYFN+KL R
Sbjct: 124 ACALSFMLENVRKPIVITGAQIPVCEVRSDGRENLIGALIIAANYDIPEVTVYFNNKLFR 183
Query: 251 GNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILR 310
GNRTVK+ + DAF+SPN +A + + I VN SIFRS ++ F V QL NVG+LR
Sbjct: 184 GNRTVKIDNRSMDAFESPNMLPIAYMDVDIKVNYDSIFRSPSMAPFVVHDQLCRNVGLLR 243
Query: 311 IYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370
I+P +S VR+ +Q+P+EGV+L T+G+GN PS+R+D+IDEL+ A DR II+NCSQC R
Sbjct: 244 IFPSMSIENVRASLQAPIEGVVLQTFGAGNMPSHRTDIIDELKKAVDRGCIIINCSQCVR 303
Query: 371 GGTSDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
G Y GK+L +G+I G DMT EAALTKLSYVLSK L +KK +M+ NIRGEL+
Sbjct: 304 GQVDIHYLTGKVLYDMGIIPGSDMTAEAALTKLSYVLSKDCWELVEKKAMMVKNIRGELT 363
Query: 431 -TDAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGA 489
A +L++ + +A+ LHLS E+ L ++P L A GDI+ +K + G
Sbjct: 364 VAKAEPLKDLEIVSQMARFLHLSSSHEMKLLCHAIFPQLLCYAASNGDIEMLKALHENGV 423
Query: 490 DISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRL 549
D+S+ D++ RN LH A S G + VKY L GVS H+RD +D + L AV +I
Sbjct: 424 DLSVVDYNGRNALHVAASAGHVGAVKYLLTQGVSFHLRDQWDENALVSAVKMKNKILIET 483
Query: 550 LRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609
LR GA L+ LG L A+ G + L S+L AG ++NQ D G T LH AV + N
Sbjct: 484 LRSAGALLSINSRRLGVELCLCASYGDTETLNSWLAAGADINQQDYNGETALHIAVKSRN 543
Query: 610 IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650
+ V YLL + D + + + A ++ L D++ +K
Sbjct: 544 KQLVHYLLDRDADPYKIDDFNLTPLRHAKKLNLQDLVIRMK 584
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%)
Query: 567 VLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIE 626
+L AA+ G I+ L++ G++L+ VD G LH A ++ +V+YLL+Q V +
Sbjct: 402 LLCYAASNGDIEMLKALHENGVDLSVVDYNGRNALHVAASAGHVGAVKYLLTQGVSFHLR 461
Query: 627 NKNGQSAIEVANQMQLNDIIELLKSS 652
++ ++A+ A +M+ +IE L+S+
Sbjct: 462 DQWDENALVSAVKMKNKILIETLRSA 487
>sp|Q86U10|LPP60_HUMAN 60 kDa lysophospholipase OS=Homo sapiens GN=ASPG PE=2 SV=3
Length = 573
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/551 (40%), Positives = 326/551 (59%), Gaps = 9/551 (1%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
E ++L +YTGGTIGM +E G L P + L +R P+ +D + + + LVLP
Sbjct: 8 ERRLLAVYTGGTIGMR-SELGVLVPGTG-LAAILRTLPMFHDEEHARARGLSEDTLVLPP 65
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASA 193
+R+LY V+E PL DSS+M W+ +A IK +YE Y GFV++HGTDT+++ AS
Sbjct: 66 ASRNQRILYTVLECQPLFDSSDMTIAEWVCLAQTIKRHYEQYHGFVVIHGTDTMAFAASM 125
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNR 253
LSFMLENL K VI+TG+Q+ I + SDG N +GAL++AG Y IPEV ++F ++L RGNR
Sbjct: 126 LSFMLENLQKTVILTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 254 TVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313
K+ + F AF SPN LA VG I +N + + + V S + +VG+LR+YP
Sbjct: 186 ATKVDARRFAAFCSPNLLPLATVGADITINRELVRKVDGKAGLVVHSSMEQDVGLLRLYP 245
Query: 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGT 373
I VR+F+Q P++GV++ T+GSGN P+ + DL+ ELR+A++R ++IVNC+ C +G
Sbjct: 246 GIPAALVRAFLQPPLKGVVMETFGSGNGPT-KPDLLQELRVATERGLVIVNCTHCLQGAV 304
Query: 374 SDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELSTDA 433
+ Y AG ++G GVI+G+DMT EAAL KLSYVL + L+L +K+++ ++RGE++ +
Sbjct: 305 TTDYAAGMAMAGAGVISGFDMTSEAALAKLSYVLGQPGLSLDVRKELLTKDLRGEMTPPS 364
Query: 434 IHNNELD-----LAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYG 488
+ L V+ L LSG QE + L+ L P+L +A GD++ ++ + G
Sbjct: 365 VEERRPSLQGNTLGGGVSWLLSLSGSQEADALRNALVPSLACAAAHAGDVEALQALVELG 424
Query: 489 ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548
+D+ + DF+ + LH A G + V L+ GV V+ RD SPL AV +I
Sbjct: 425 SDLGLVDFNGQTPLHAAARGGHTEAVTMLLQRGVDVNTRDTDGFSPLLLAVRGRHPGVIG 484
Query: 549 LLRHCGAHL-TNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLN 607
LLR GA L T E G L A R ++ LQ + AG +L Q G + LH A
Sbjct: 485 LLREAGASLSTQELEEAGTELCRLAYRADLEGLQVWWQAGADLGQPGYDGHSALHVAEAA 544
Query: 608 NNIESVRYLLS 618
N+ V +L S
Sbjct: 545 GNLAVVAFLQS 555
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 571 AAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNG 630
AA G ++ LQ+ + G +L VD G TPLHAA + E+V LL + VD+ + +G
Sbjct: 408 AAHAGDVEALQALVELGSDLGLVDFNGQTPLHAAARGGHTEAVTMLLQRGVDVNTRDTDG 467
Query: 631 QSAIEVANQMQLNDIIELLKSS 652
S + +A + + +I LL+ +
Sbjct: 468 FSPLLLAVRGRHPGVIGLLREA 489
>sp|O88202|LPP60_RAT 60 kDa lysophospholipase OS=Rattus norvegicus GN=Aspg PE=1 SV=1
Length = 564
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/549 (40%), Positives = 331/549 (60%), Gaps = 8/549 (1%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
E ++L +YTGGTIGM +E G L P + L +R +L+D Y + + LVLP
Sbjct: 8 EQRLLAIYTGGTIGMR-SEGGVLVPG-RGLAAVLRTLHMLHDEEYARAHSLPEDTLVLPP 65
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASA 193
+R++YKV+E PL DSS+M W++IA I+ +Y Y GFV++HGTDT+++ AS
Sbjct: 66 ASSDQRIIYKVLECQPLFDSSDMTITEWVQIAQTIERHYTQYQGFVVIHGTDTMAFAASV 125
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNR 253
LSFMLENL KPVI+TG+Q+ I ++ SDG N +GAL++AG Y IPEV ++F ++L RGNR
Sbjct: 126 LSFMLENLQKPVILTGAQVPIHELWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 254 TVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313
T K+ + F AF SPN P LA VG + +N + + ++S V S + +VG+LR+YP
Sbjct: 186 TTKVDARRFAAFCSPNLPPLATVGADVTINRELVRKASWKSHLVVHSNMEPDVGLLRLYP 245
Query: 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGT 373
I VR+F+Q P++GV++ T+GSGN P+ + DLI ELR A++R +IIVNC+ C +G
Sbjct: 246 GIPASLVRTFLQPPLKGVVMETFGSGNGPT-KPDLIQELRAAAERGLIIVNCTHCLQGAV 304
Query: 374 SDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL---S 430
+ Y G ++G G+I+G+DMT EAAL KLSYVL + L+L +K ++ ++RGE+ +
Sbjct: 305 TSDYAPGMAMAGAGIISGFDMTSEAALAKLSYVLGQPGLSLSDRKKLLAKDLRGEMTLPT 364
Query: 431 TDAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGAD 490
TD + +++ L L ++G Q+ + +K +L P L +A GD+D ++ G D
Sbjct: 365 TDDLLGDDM-LGCRATWLLSMNGSQDADAMKDVLLPGLALAAAHAGDLDTLQAFVELGRD 423
Query: 491 ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLL 550
+++ D+ + LH A G +V L+ GV V + SPL AV +IRLL
Sbjct: 424 LNLKDYSGQTPLHVAARRGHASVVAMLLQKGVDVDACNEDGQSPLLLAVRGRHQSVIRLL 483
Query: 551 RHCGAHLTNEPMF-LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609
R GAHL+ + + +G L A+R + L+++ AG +L Q D G L A N
Sbjct: 484 RAAGAHLSPQELEDVGTELCRLASRADSEGLRAWWQAGADLGQPDYDGHCALQVAEAAGN 543
Query: 610 IESVRYLLS 618
+ V L S
Sbjct: 544 ADVVALLQS 552
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 580 LQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQ 639
LQ+++ G +LN D G TPLH A + V LL + VD+ N++GQS + +A +
Sbjct: 414 LQAFVELGRDLNLKDYSGQTPLHVAARRGHASVVAMLLQKGVDVDACNEDGQSPLLLAVR 473
Query: 640 MQLNDIIELLKSS 652
+ +I LL+++
Sbjct: 474 GRHQSVIRLLRAA 486
>sp|A0JNU3|LPP60_MOUSE 60 kDa lysophospholipase OS=Mus musculus GN=Aspg PE=1 SV=1
Length = 564
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 328/549 (59%), Gaps = 8/549 (1%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
E ++L +YTGGTIGM +E G L P + L ++ + +D Y + + LVLP
Sbjct: 8 ERRLLAIYTGGTIGMR-SEGGVLVPG-RGLAAVLKTLHMFHDEEYAQAHSLPEDTLVLPP 65
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASA 193
+R++Y V+E PL DSS+M W++IA I+ +Y Y GFV++HGTDT+++ AS
Sbjct: 66 ASPDQRIIYTVLECQPLFDSSDMTITEWVQIAQTIERHYAQYQGFVVIHGTDTMAFAASV 125
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNR 253
LSFMLENL KPV++TG+Q+ I + SDG N +GAL++AG Y IPEV ++F ++L RGNR
Sbjct: 126 LSFMLENLQKPVVLTGAQVPIHALWSDGRENLLGALLMAGQYVIPEVCLFFQNQLFRGNR 185
Query: 254 TVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313
T K+ + F AF SPN P LA VG + +N + + ++ V S + +VG+LR+YP
Sbjct: 186 TTKVDARRFAAFCSPNLPPLATVGADVTINRELVRKACGKSHLVVHSSMEPDVGLLRLYP 245
Query: 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGT 373
I VR+F+Q P++GV++ T+GSGN P+ + DL+ ELR+A+++ +IIVNC+ C +G
Sbjct: 246 GIPASLVRTFLQPPLKGVVMETFGSGNGPT-KPDLLQELRVAAEQGLIIVNCTHCLQGAV 304
Query: 374 SDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL---S 430
+ Y +G ++G G+++G+DMT EAAL KLSYVL + L+L +K ++ ++RGE+ +
Sbjct: 305 TSDYASGMAMAGAGIVSGFDMTSEAALAKLSYVLGQPGLSLNDRKKLLAKDLRGEMTLPA 364
Query: 431 TDAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGAD 490
TD + + + L VA L ++G QE + +K +L P L +A GD+D ++ D
Sbjct: 365 TDVLLQDGM-LGCRVAWLLSMNGSQEADTMKDVLLPGLALAAAHAGDLDTLQAFVELDRD 423
Query: 491 ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLL 550
+++ D+ + LH A G +V L+ G V R+ SPL AV +I LL
Sbjct: 424 LNLKDYSGQTPLHVAARRGHAAVVTMLLQRGADVDARNEDGQSPLLLAVRGRHQSVIGLL 483
Query: 551 RHCGAHLTNEPMF-LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609
R GA L+ + + +G L A+RG + L+++ AG +L Q D G L A N
Sbjct: 484 RAAGARLSPQELEDVGTELCRLASRGDSEGLRAWWQAGADLGQPDYDGHCALQVAEAAGN 543
Query: 610 IESVRYLLS 618
+ V L S
Sbjct: 544 ADVVALLQS 552
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 580 LQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQ 639
LQ+++ +LN D G TPLH A + V LL + D+ N++GQS + +A +
Sbjct: 414 LQAFVELDRDLNLKDYSGQTPLHVAARRGHAAVVTMLLQRGADVDARNEDGQSPLLLAVR 473
Query: 640 MQLNDIIELLKSSETK 655
+ +I LL+++ +
Sbjct: 474 GRHQSVIGLLRAAGAR 489
>sp|P0A962|ASPG1_ECOLI L-asparaginase 1 OS=Escherichia coli (strain K12) GN=ansA PE=1 SV=1
Length = 338
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 219/360 (60%), Gaps = 26/360 (7%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
+ + V YTGGTIGM+ +EQG + P S L ++ P + P
Sbjct: 3 KKSIYVAYTGGTIGMQRSEQGYI-PVSGHLQRQLALMPEFHR----------------PE 45
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASA 193
+ D + + EYTPL+DSS+M W IA DIK +Y+ YDGFVILHGTDT++YTASA
Sbjct: 46 MPD-----FTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASA 100
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNR 253
LSFMLENLGKPVIVTGSQI + ++RSDG N + AL +A NY I EVT++FN++L RGNR
Sbjct: 101 LSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR 160
Query: 254 TVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313
T K FDAF SPN P L + G+ I + + + V +G++ IYP
Sbjct: 161 TTKAHADGFDAFASPNLPPLLEAGIHIR-RLNTPPAPHGEGELIVHPITPQPIGVVTIYP 219
Query: 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGT 373
IS VR+F++ P++ +IL +YG GN P N++ + EL+ ASDR +++VN +QC G
Sbjct: 220 GISADVVRNFLRQPVKALILRSYGVGNAPQNKA-FLQELQEASDRGIVVVNLTQCMSGKV 278
Query: 374 S-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELSTD 432
+ Y G L+ GVI G DMT EA LTKL Y+LS+ EL + + M N+RGEL+ D
Sbjct: 279 NMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQ-ELDTETIRKAMSQNLRGELTPD 337
>sp|P0A963|ASPG1_ECO57 L-asparaginase 1 OS=Escherichia coli O157:H7 GN=ansA PE=3 SV=1
Length = 338
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 219/360 (60%), Gaps = 26/360 (7%)
Query: 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
+ + V YTGGTIGM+ +EQG + P S L ++ P + P
Sbjct: 3 KKSIYVAYTGGTIGMQRSEQGYI-PVSGHLQRQLALMPEFHR----------------PE 45
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASA 193
+ D + + EYTPL+DSS+M W IA DIK +Y+ YDGFVILHGTDT++YTASA
Sbjct: 46 MPD-----FTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASA 100
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNR 253
LSFMLENLGKPVIVTGSQI + ++RSDG N + AL +A NY I EVT++FN++L RGNR
Sbjct: 101 LSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR 160
Query: 254 TVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313
T K FDAF SPN P L + G+ I + + + V +G++ IYP
Sbjct: 161 TTKAHADGFDAFASPNLPPLLEAGIHIR-RLNTPPAPHGEGELIVHPITPQPIGVVTIYP 219
Query: 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGT 373
IS VR+F++ P++ +IL +YG GN P N++ + EL+ ASDR +++VN +QC G
Sbjct: 220 GISADVVRNFLRQPVKALILRSYGVGNAPQNKA-FLQELQEASDRGIVVVNLTQCMSGKV 278
Query: 374 S-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELSTD 432
+ Y G L+ GVI G DMT EA LTKL Y+LS+ EL + + M N+RGEL+ D
Sbjct: 279 NMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQ-ELDTETIRKAMSQNLRGELTPD 337
>sp|P26900|ASPG1_BACSU L-asparaginase 1 OS=Bacillus subtilis (strain 168) GN=ansA PE=2
SV=1
Length = 329
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 188/356 (52%), Gaps = 41/356 (11%)
Query: 76 KVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVK 135
K+L+L TGGTI + E G LAP K D++ D Y +
Sbjct: 3 KLLMLTTGGTIASVEGENG-LAPGVK--ADELLSYVSKLDNDYTM--------------- 44
Query: 136 DTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALS 195
+T+ ++ +DS+NM +W++IA +KE Y++YDGFVI HGTDT++YT++ALS
Sbjct: 45 ETQSLMN--------IDSTNMQPEYWVEIAEAVKENYDAYDGFVITHGTDTMAYTSAALS 96
Query: 196 FMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGNRTV 255
+ML++ KP+++TGSQI I ++D N A+ A + V V F+ ++I+G R +
Sbjct: 97 YMLQHAKKPIVITGSQIPITFQKTDAKKNITDAIRFACE-GVGGVYVVFDGRVIQGTRAI 155
Query: 256 KMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKK-----FDVQSQLNLNVGILR 310
K+ K +DAF+S N+P +A +N I + + + F V + L +V +L+
Sbjct: 156 KLRTKSYDAFESINYPYIAF------INEDGIEYNKQVTEPENDTFTVDTSLCTDVCLLK 209
Query: 311 IYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC-S 369
++P + + ++S +G+++ +YGSG P D++ ++ + +++V +QC
Sbjct: 210 LHPGLKPEMFDA-LKSMYKGIVIESYGSGGVPFEGRDILSKVNELIESGIVVVITTQCLE 268
Query: 370 RGGTSDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNI 425
G YE G+ ++ +I +M EA + KL + L +S L K IM T I
Sbjct: 269 EGEDMSIYEVGRRVNQDLIIRSRNMNTEAIVPKLMWALGQSS-DLPVVKRIMETPI 323
>sp|Q9V0T9|GATD_PYRAB Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=gatD PE=1 SV=1
Length = 438
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 158/288 (54%), Gaps = 15/288 (5%)
Query: 153 SSNMCQVHWIKIANDIKEYYESYD-GFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S +M HW+KIA+++ + S D G V+ HGTDT+ YTA+ALSFML NLGKPV++ G+Q
Sbjct: 146 SEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQ 205
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLI-------RGNRTVKMSVKEFDA 264
S + SD N I ++ +A + ++ EV V + + RG + KM DA
Sbjct: 206 RSSDRPSSDAAMNLICSVRMATS-EVAEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDA 264
Query: 265 FDSPNFPNLAKVGLTIDVN-MKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSF 323
F S N +AK+ ++ ++ +R + ++ +V ++ V ++++YP IS+ +
Sbjct: 265 FRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPGISSEIIDFL 324
Query: 324 MQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKI 382
+ +G+++ G G+ P +D+I + A + V + SQC G + + Y G+
Sbjct: 325 VDKGYKGIVIEGTGLGHTP---NDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRK 381
Query: 383 LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
L GVI DM PE A KL +VL ++ L++ + +M+TN GE++
Sbjct: 382 LLKAGVIPCEDMLPETAYVKLMWVLGHTQ-NLEEVRKMMLTNYAGEIT 428
>sp|O59132|GATD_PYRHO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=gatD PE=3 SV=1
Length = 438
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 157/288 (54%), Gaps = 15/288 (5%)
Query: 153 SSNMCQVHWIKIANDIKEYYESYD-GFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S +M HWIKIA+++ + S D G V+ HGTDT+ YTA+ALSFML +LGKPVI+ G+Q
Sbjct: 146 SEDMKPKHWIKIAHEVAKSLNSGDSGVVVAHGTDTMGYTAAALSFMLRDLGKPVILVGAQ 205
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLI-------RGNRTVKMSVKEFDA 264
S + SD N I ++ ++ + D+ EV V + + RG + KM DA
Sbjct: 206 RSSDRPSSDAAMNLICSVRMSTS-DVAEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDA 264
Query: 265 FDSPNFPNLAKVGLTIDVN-MKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSF 323
F S N +AKV + ++ +R + + V +L V ++++YP IS+ + F
Sbjct: 265 FRSINDVPIAKVWPNGKIEFLRDDYRRRSDSEVWVDDKLEEKVALVKVYPGISSEIIEFF 324
Query: 324 MQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKI 382
+ G+++ G G+ P +D+I ++ A++ + + SQC G + + Y G+
Sbjct: 325 IDKGYRGIVIEGTGLGHTP---NDIIPSIQRATEEGIAVCMTSQCIYGRVNLNVYATGRR 381
Query: 383 LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
L GVI DM PE A KL +VL ++ L++ + +M+TN GE++
Sbjct: 382 LLKAGVIPCEDMLPETAYVKLMWVLGHTQ-DLEEVRRMMLTNYAGEIT 428
>sp|A5UK11|GATD_METS3 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=gatD PE=3
SV=1
Length = 436
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 184/377 (48%), Gaps = 50/377 (13%)
Query: 69 SEDRLESKVLVLYTGGTIG-MEDNEQGALAPSSKPLTDKIRENPLLYD-RHYDVCKTQDG 126
+ D + + ++ TGGT+ + D GA+ P D I+ NP L D +Y+V
Sbjct: 85 AHDPSKQNISIISTGGTVSSIIDYRTGAVHPKFTA-ADLIKANPELLDYANYNV------ 137
Query: 127 NVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIK----IANDIKEYYESYDGFVILH 182
+ LY ++ S NM +W++ IANDI + DG VI H
Sbjct: 138 ------------KALYNIL-------SENMQPKYWVEAAESIANDISD---GSDGIVIAH 175
Query: 183 GTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTV 242
GTDTL YTA+ALSFML+ P+++TG+Q S + SD N I + ++A DI EV+V
Sbjct: 176 GTDTLHYTAAALSFMLKT-PVPIVITGAQRSSDRPSSDANMNLIDS-VVAAKSDIAEVSV 233
Query: 243 YFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKV-GLTIDVNMKSIFRSSTIK 294
+ L +G + KM D F S N+ +AK+ ++D+N +
Sbjct: 234 CMHGSLNDSYTYLHKGTKVRKMHTSRRDTFRSINYEPIAKIENHSVDINPNYRYTKRNEN 293
Query: 295 KFDVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRL 354
+ +V S + VG+++ +P I + + +G+++ G G+ P LI L
Sbjct: 294 ELEVNSAVEEKVGLIKSFPGICEELIEYHIDKGYKGLVIEGTGLGHVPDK---LITPLAR 350
Query: 355 ASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELT 413
A D N+ +V SQC G + + Y G+ + GVI+G DMTPE A KLS+VL ++
Sbjct: 351 AHDENIPVVMTSQCLYGRVNMNVYSTGREILNAGVISGRDMTPETAYVKLSWVLGQTN-D 409
Query: 414 LQQKKDIMMTNIRGELS 430
+ + +M NI GE +
Sbjct: 410 IGEVAKLMNKNIAGEFN 426
>sp|Q8TV84|GATD_METKA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=gatD PE=3 SV=1
Length = 458
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 177/371 (47%), Gaps = 48/371 (12%)
Query: 77 VLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVK 135
V V+ TGGTI D E GA+ P+ T + V +P +
Sbjct: 99 VSVMSTGGTIACRVDYETGAVKPAF----------------------TAEELVGAVPELL 136
Query: 136 DTRRVLYKVVEYTPLLD--SSNMCQVHWIKIANDIKEYYESYD--GFVILHGTDTLSYTA 191
D + +V+ +LD S NM HW+KIA ++ + D G VI HGTDT+++TA
Sbjct: 137 D----VINIVDARAVLDLLSENMEPKHWMKIAEEVVDALSDPDVEGVVIGHGTDTMAFTA 192
Query: 192 SALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK---- 247
+ALSF++E L PV++ G+Q S + SD N I A AG+ ++ EVTV +
Sbjct: 193 AALSFVIEGLNGPVVLVGAQRSSDRPSSDAASNLIAACAFAGDGEVGEVTVCMHGWTSDE 252
Query: 248 ---LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVN-----MKSIFRSSTIKKFDVQ 299
+ RG R KM DAF S +AKV + N ++S +R + ++
Sbjct: 253 VCLVHRGVRVRKMHTSRRDAFRSVESIPIAKVDVKDLRNPKIEFLRSDYRRPEDGEPEIS 312
Query: 300 SQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRN 359
V +++ P + + ++ G++L G G+ ++ + A D
Sbjct: 313 GGFEEKVALVKFAPGMDPEVLDFYVDRGYRGIVLEGTGLGHVSEQ---WLESIERAVDDG 369
Query: 360 VIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKK 418
+ +V SQC G + + Y G++L +GVI G DM PE A KL YVL +++ +++ +
Sbjct: 370 IAVVMTSQCLYGRVNMNVYRTGRLLRAVGVIPGEDMLPEVAYVKLMYVLDRTD-DIKEVE 428
Query: 419 DIMMTNIRGEL 429
+M TNI GE+
Sbjct: 429 RLMRTNIAGEI 439
>sp|Q8U0X0|GATD_PYRFU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=gatD PE=3 SV=1
Length = 438
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 150/288 (52%), Gaps = 15/288 (5%)
Query: 153 SSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S +M HWI+IA++ + S +G VI HGTDT+ YTA+ALSFML NL KPV++ G+Q
Sbjct: 146 SEDMKPKHWIEIAHETAKALNSGNEGVVIAHGTDTMGYTAAALSFMLRNLTKPVVLVGAQ 205
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLI-------RGNRTVKMSVKEFDA 264
S + SD N I A +A + D EV V + + RG + KM DA
Sbjct: 206 RSSDRPSSDAAMNLICATRMAVS-DAAEVMVVMHGETSDTYCLAHRGTKVRKMHTSRRDA 264
Query: 265 FDSPNFPNLAKVGLTIDVN-MKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSF 323
F S N +AK+ + ++ +R + + V +L V ++++YP +S +
Sbjct: 265 FRSINDIPIAKIWSDGKIEFLRDDYRKRSEGEVWVDDKLEEKVALVKVYPGMSAELIDFL 324
Query: 324 MQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKI 382
+ +G+++ G G+ P SDLI ++ A D V + SQC G + + Y G+
Sbjct: 325 VDKGYKGIVIEGTGLGHTP---SDLIPSIKRAVDEGVAVCMTSQCLYGRVNLNVYATGRK 381
Query: 383 LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
L GVI DM PE A KL +VL + L++ K +M+TN GE++
Sbjct: 382 LLKAGVIPCEDMLPETAYVKLMWVLGHTN-DLREAKKMMLTNYAGEIT 428
>sp|Q5JI77|GATD_PYRKO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=gatD PE=3 SV=1
Length = 440
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 15/288 (5%)
Query: 153 SSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S +M +W KIA++ + S DG VI HGTDT+ YTA+ALSFML NL KPV++ GSQ
Sbjct: 148 SEDMKPEYWKKIAHEAAKALNSDEDGVVIAHGTDTMGYTAAALSFMLRNLTKPVVLVGSQ 207
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLI-------RGNRTVKMSVKEFDA 264
S + SD N I A +A + D EV V + + RG + KM D
Sbjct: 208 RSSDRPSSDAAMNLICATRMAVS-DAAEVMVVMHGETSDTYCLAHRGTKVRKMHTSRRDT 266
Query: 265 FDSPNFPNLAKVGLTIDVN-MKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSF 323
F S N +AKV + ++ +R + +V + V IL+IYP +++ +
Sbjct: 267 FRSINDVPIAKVWPDGKIEYLRDDYRKRGEGEVEVDDKFEEKVAILKIYPGVTSELLEFL 326
Query: 324 MQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKI 382
+ +G+++ G G+ P +D+I + A + V + SQC G + + Y G+
Sbjct: 327 VDRGYKGIVIEGTGLGHTP---NDMIPAIERAVENGVAVCMTSQCLYGRVNLNVYSTGRR 383
Query: 383 LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
L GVI DM PE A KL +VL ++ L++ + +M+TN GE++
Sbjct: 384 LLKAGVIPCEDMLPETAYVKLGWVLGHTD-DLKEVRRMMLTNYAGEIT 430
>sp|Q971W5|GATD_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatD PE=3 SV=1
Length = 448
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 195/386 (50%), Gaps = 47/386 (12%)
Query: 60 RRASLTLNSSEDRL---ESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYD 115
+R ++ +N E + +S+V ++ TGGTI + + E GA+ P+
Sbjct: 74 KRQNIQVNKGEQKPLKEKSEVKIISTGGTIVSKVEYETGAVRPAL--------------- 118
Query: 116 RHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESY 175
T + + +P + + ++ +V+ ++ L S NM +WIKIA K+ +
Sbjct: 119 -------TTEEIINFMPEINEIAKIDAEVL-FSIL--SENMKPEYWIKIAESAKKALDEG 168
Query: 176 D-GFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGN 234
+ G VI HGTDT++YTASAL+F ++L P+++ GSQ S + SD N A+++A N
Sbjct: 169 NLGVVIAHGTDTMAYTASALAFSFKSLTGPIVLVGSQRSSDRPSSDSPINLYSAILVAKN 228
Query: 235 YDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSI 287
EVT+ + + L+ RG + KM DAF S N LAKV + +K +
Sbjct: 229 SPFAEVTINMHGESSDTYTLVHRGVKVRKMHTSRRDAFQSINDIPLAKV-FWKEKEIK-L 286
Query: 288 FRSSTIKKFD---VQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSN 344
R+ IK+ + + ++ + V +L+ YP I+ + + S + G+I+ G G+
Sbjct: 287 LRNDYIKRKEENALDAKFDTRVFLLKYYPGINPEIIEYLISSGIRGIIVEGTGLGH---T 343
Query: 345 RSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKL 403
++ +D + A+ V I SQC G + + Y G++L GV DM PE AL KL
Sbjct: 344 STEFVDYFKKATKDGVFIGMTSQCLFGRVNMNVYTTGRLLQESGVTPLEDMLPETALVKL 403
Query: 404 SYVLSKSELTLQQKKDIMMTNIRGEL 429
+VL+ E L + + +M+TN GE+
Sbjct: 404 MWVLA-HESDLDKIRSLMLTNFVGEI 428
>sp|Q2NEH1|GATD_METST Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=gatD PE=3 SV=1
Length = 438
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 210/436 (48%), Gaps = 59/436 (13%)
Query: 13 LEDKFDFSNGSDNSIEIVSIGNDNFDHRFKYLQQVDQDERPLHQDSDRRASLTLNSSEDR 72
L +K D+SN + +++ S N D + ++++ + ++P + L+ + +
Sbjct: 35 LLEKPDYSNENTIILKLDSGYNIGIDIKDAKIEKISEGKKP---------QIELDPVDKK 85
Query: 73 LESK---VLVLYTGGTIG-MEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNV 128
+ K + +L TGGT+ + D + GA+ P+ D +R P L D N+
Sbjct: 86 ISDKKKNLSILSTGGTVASVIDYKTGAVHPAFTA-DDLLRATPELVDY---------ANI 135
Query: 129 LVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDI-KEYYESYDGFVILHGTDTL 187
+ ++ ++ S NM +W K A I E DG +I HGTDT+
Sbjct: 136 --------NAKAIFNIL-------SENMTPEYWKKTATTIYDEINNGADGIIIAHGTDTM 180
Query: 188 SYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK 247
YTASALSFM+++ P+++TG+Q S + SD N + A + A DI EVT+ +
Sbjct: 181 HYTASALSFMIDS-PVPIVLTGAQRSSDRPSSDAFTNLM-ASVNAAKSDIAEVTICMHGT 238
Query: 248 -------LIRGNRTVKMSVKEFDAFDSPNFPNLAKV---GLTI-DVNMKSIFRSSTIKKF 296
L RG R KM D F S N LA++ +TI D +K R+ K+
Sbjct: 239 EDDSYCDLHRGTRARKMHTSRRDTFTSINMNPLARIENNKVTINDTQVKYTKRNE--KEL 296
Query: 297 DVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLAS 356
+ + L V ++++YP IS + ++ +G+++ G G+ D+I + A+
Sbjct: 297 SLNTNLADKVALIKMYPGISPEIIDIYVDKNYDGIVIEGTGLGHC---SDDVITSITRAT 353
Query: 357 DRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQ 415
++ +V SQC G T+ + Y +G+ L VI DM PE A TKL + +++ +
Sbjct: 354 SEDIPVVMTSQCLFGRTNMNVYSSGRRLLQNNVIGVGDMLPETAYTKLLWAAGQTD-NVS 412
Query: 416 QKKDIMMTNIRGELST 431
+ +IM TN++GE+ T
Sbjct: 413 EIYEIMKTNLKGEMDT 428
>sp|A4YHH3|GATD_METS5 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=gatD PE=3 SV=1
Length = 439
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 184/379 (48%), Gaps = 54/379 (14%)
Query: 69 SEDR--LESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQD 125
SE R L KV ++ TGGTI + + E GA+ P+ T++I
Sbjct: 80 SEHRELLPGKVKIISTGGTIVSKVEYETGAVRPALS--TEEI------------------ 119
Query: 126 GNVLVLPRVKD----TRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-ESYDGFVI 180
+ +P +++ + +L+ ++ S NM W+KIA +K + E +G V+
Sbjct: 120 --IRFVPEIQEITSISAEILFSIL-------SENMKPEFWVKIAEAVKRAFDEGSEGVVV 170
Query: 181 LHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEV 240
HGTDT+SYTA+AL+F ++ L PV++ GSQ S + SD N + +++LA EV
Sbjct: 171 AHGTDTMSYTAAALAFSIQRLPGPVVLVGSQRSSDRPSSDSGINLVSSVLLAKEAPFGEV 230
Query: 241 TVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTI 293
V + + RG + KM DAF S N LAKV L + +K + R+ +
Sbjct: 231 VVNMHGESSDTYTLAHRGVKVRKMHTSRRDAFQSINDHPLAKV-LWKERTVK-VLRNDYL 288
Query: 294 KKFD---VQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLID 350
++ D + + V +L+ YP + V + S G+I+ G G+ SD +
Sbjct: 289 RRSDGVELNPKFENRVFLLKFYPGLRPDIVDILLSSGYRGIIVEGTGLGH---TSSDFQE 345
Query: 351 ELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSK 409
+ A + + SQC G + + Y+ G++L GV+ DM PE AL KL + L +
Sbjct: 346 AFKRAVKEGLFVGMTSQCLFGRVNMNVYQTGRLLQQSGVVPLGDMLPEVALVKLMWALGQ 405
Query: 410 SELTLQQKKDIMMTNIRGE 428
+ L++ K IM+TN+ GE
Sbjct: 406 TS-DLEEVKRIMLTNLVGE 423
>sp|Q4J955|GATD_SULAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=gatD PE=3 SV=1
Length = 446
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 195/378 (51%), Gaps = 46/378 (12%)
Query: 75 SKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPR 133
S+V+++ TGGTI + + E GA+ P+ P D+I E +P
Sbjct: 90 SEVMIISTGGTIVSKIEYETGAVRPALTP--DEIIE--------------------FMPE 127
Query: 134 VKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYD-GFVILHGTDTLSYTAS 192
+K+ R+ +++ ++ L S NM +WIKIA + K+ + + G VI HGTDT++YT++
Sbjct: 128 IKEIARIDAEIL-FSIL--SENMKPEYWIKIAEEAKKALDKGNKGVVIAHGTDTMAYTSA 184
Query: 193 ALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFN------H 246
ALSF + P+++ GSQ S + SD N + ++++A N EV V + +
Sbjct: 185 ALSFSFRKMTGPIVLVGSQRSSDRPSSDSSMNLLTSILVAKNAPFGEVVVNMHGESSDTY 244
Query: 247 KLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSI---FRSSTIKKFDVQSQL 302
L+ RG + KM DAF S N LAKV ID ++ + +RS + + ++
Sbjct: 245 TLVHRGVKVRKMHTSRRDAFQSINDLPLAKVHY-IDKKIEILSDNYRSKESEN-TLDAKF 302
Query: 303 NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVII 362
+ V +L+ YP +S V + S + G+I+ G G+ SD + + AS V I
Sbjct: 303 DNRVFLLKYYPGLSPDMVEHLISSGIRGIIIEGTGLGH---TSSDFYEVFKKASKDGVFI 359
Query: 363 VNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIM 421
SQC G + + Y G++L GV+ DM PE AL KL + L+ E L + K+IM
Sbjct: 360 GMTSQCLFGRVNMNVYTTGRLLQEAGVVPLEDMLPETALVKLMWTLAH-ENDLDRIKEIM 418
Query: 422 MTNIRGELSTDAIHNNEL 439
+TN+ GE+ + IH+ E+
Sbjct: 419 LTNLAGEI--NYIHHYEM 434
>sp|O26802|GATD_METTH Glutamyl-tRNA(Gln) amidotransferase subunit D
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=gatD PE=1 SV=1
Length = 435
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 181/391 (46%), Gaps = 50/391 (12%)
Query: 54 LHQDSDRRASLT-LNSSEDRLESKVLVLYTGGTIG-MEDNEQGALAPSSKPLTDKIRENP 111
L + S+ R L + ++ED V ++ TGGT+ + D GA+ P+ D +R NP
Sbjct: 69 LEKGSEPRIELPPVEAAEDPELPDVSIISTGGTVASIIDYRTGAVHPAFT-ADDLLRANP 127
Query: 112 LLYDRHYDVCKTQDGNVLVLPRVKDTR-RVLYKVVEYTPLLDSSNMCQVHWIKIANDI-K 169
L D + + R R ++ ++ S NM +W++ A +
Sbjct: 128 ELLD------------------IANIRGRAVFNIL-------SENMKPEYWVETARAVYG 162
Query: 170 EYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229
E + DG V+ HGTDT+ YT++ALSFML PV+ TG+Q S + SD N I
Sbjct: 163 EIKDGADGVVVAHGTDTMHYTSAALSFMLRT-PVPVVFTGAQRSSDRPSSDASLN-IQCS 220
Query: 230 ILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKV---GLT 279
+ A +I EVTV + L RG + KM D F S N LA+V G+
Sbjct: 221 VRAATSEIAEVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIK 280
Query: 280 IDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSG 339
I ++ +R + ++ ++ V ++ YP IS ++ + G+++ G G
Sbjct: 281 I---LEENYRKRGSDELELSDRVEERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLG 337
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ P +I E A D V + SQC G + + Y G+ L GVI DM PE
Sbjct: 338 HCPDTLIPVIGE---AHDMGVPVAMTSQCLNGRVNMNVYSTGRRLLQAGVIPCDDMLPEV 394
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
A K+ +VL +++ + +++M NI GE+
Sbjct: 395 AYVKMCWVLGQTD-DPEMAREMMRENIAGEI 424
>sp|Q60331|GATD_METJA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=gatD PE=3 SV=1
Length = 417
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 50/400 (12%)
Query: 42 KYLQQVDQDERPLHQDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSS 100
K ++ + + E+P ++ LN ++ + +L TGGT+ + D + GA+ PS
Sbjct: 47 KNIEIIAKGEKPKYELP------PLNIEKNEKLKTISILSTGGTVASKVDYKTGAVHPSF 100
Query: 101 KPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVH 160
D IR P L D + +K R + ++ S NM +
Sbjct: 101 TA-DDLIRAVPELLD---------------IANIKG--RAVMNIL-------SENMKPEY 135
Query: 161 W-IKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRS 219
W KE E DG VI HGTDT+SYTASALSFM++ P+I+ G+Q S + S
Sbjct: 136 WRKIAEEIKKEIEEGADGIVIAHGTDTMSYTASALSFMVK-ADVPIILVGAQRSSDRPSS 194
Query: 220 DGVHNFIGALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPN 272
D N I A +LA I V V + + L +G + K DAF S N
Sbjct: 195 DAALNLISA-VLAAREPIKGVYVVMHGESGDTFCYLHKGVKVRKCHSSRRDAFKSINSIP 253
Query: 273 LAKVGLTID--VNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEG 330
+AK+ + ++ + +S KK ++ + L V ++++YP + +R ++ +G
Sbjct: 254 VAKINPFTKEIIYLQEVEKSDNSKKVEINTNLEEKVALIKVYPGMDGEIIRFYVDKEYKG 313
Query: 331 VILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVI 389
++L G G+ P + + ++ A+D+ V++V +Q G + + Y G+ L +GVI
Sbjct: 314 IVLEGTGLGHAPEY---IFEHIKYATDKGVVVVMTTQTINGRVNMNVYSNGRELQKLGVI 370
Query: 390 NGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
DM PE AL KL Y+L E ++ K ++ N+ GE+
Sbjct: 371 GCEDMPPEVALVKLMYLLGNYE--PEEVKKLINKNLVGEI 408
>sp|P61400|GATD_METMP Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatD PE=3 SV=1
Length = 418
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 175/367 (47%), Gaps = 48/367 (13%)
Query: 79 VLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDT 137
+L TGGT+ D + GA+ P+ T D + +P + D
Sbjct: 78 ILSTGGTVASRVDYKTGAVHPAF----------------------TADDLIRAVPELMDV 115
Query: 138 RRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSF 196
+ KV+ + S NM +W+ A+ IKE E+ +G VI HGTDT+ YTASALSF
Sbjct: 116 ANIKGKVILN---ILSENMLPKYWVMTADAIKEEIENGAEGIVIAHGTDTMHYTASALSF 172
Query: 197 MLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LI 249
M+ N P+I+ G+Q S + SD N I A + A I V V + + L
Sbjct: 173 MV-NSEVPIILVGAQRSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLH 230
Query: 250 RGNRTVKMSVKEFDAFDSPNFPNLAKVG-----LTIDVNMKSIFRSSTIKKFDVQSQLNL 304
G + K+ DAF S N +A+V +T +KS RS IK+ + + L
Sbjct: 231 EGTKVRKLHSSRRDAFKSVNETPIAEVNPFTKKVTYLREVKSQDRSK-IKEVVLNTNLEE 289
Query: 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVN 364
V ++++YP I + ++ ++ + +G+IL G G+ P + ID A++ NV++
Sbjct: 290 KVALIKVYPGIDSEILKFYVDNGYKGIILEGTGLGHTPETFFEGID---YANENNVLVAM 346
Query: 365 CSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423
+Q G + + Y G+ L GVI DM E A KL ++L E ++ K++M
Sbjct: 347 TTQTINGRVNMNVYSNGRELQAKGVIPCEDMLSEVAFVKLMHLLGNYE--FKEAKELMSK 404
Query: 424 NIRGELS 430
NI GE++
Sbjct: 405 NIAGEIN 411
>sp|Q97ZH5|GATD_SULSO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=gatD PE=3 SV=1
Length = 444
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 188/397 (47%), Gaps = 53/397 (13%)
Query: 52 RPLHQDSDRRASLTLNSSEDRLESKVLVLYTGGTI-GMEDNEQGALAPSSKPLTDKIREN 110
+P+ + S + + +S++ ++ TGGTI + E GA+ P+
Sbjct: 69 KPIEKKSSKDRESERREVHNGAKSEIKIISTGGTIVSRVEYETGAVRPAL---------- 118
Query: 111 PLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKE 170
T + + LP + + +V +V+ ++ L S NM W+KIA +K+
Sbjct: 119 ------------TTEEIIQFLPEINEIAKVDAEVL-FSIL--SENMKPEFWVKIAESVKK 163
Query: 171 YY-ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229
+ E G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+
Sbjct: 164 AFDEGNTGIVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAV 223
Query: 230 ILAGNYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLT--- 279
I A EV V + + L+ RG + KM DAF S N LAKV
Sbjct: 224 ITAKYAPFGEVVVNMHAESSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKVLWKERK 283
Query: 280 -IDVNMKSIFRSSTI---KKFDVQSQLNLNVGILRIYPHISNHTVRSFM-QSPMEGVILL 334
+ +N K I + KFD + V +L YP + + + + + G+I+
Sbjct: 284 LVMLNEKYISKKDETLLDAKFDNR------VFLLYYYPGLDRDFLEQMLTNTKIRGIIIA 337
Query: 335 TYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYD 393
G G+ SD I+ R A+ + I +QC G + + Y G+ L GV D
Sbjct: 338 GTGLGH---TSSDHIELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLED 394
Query: 394 MTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
M PE AL KL +VL+ E L++ +++M+TN+ GE++
Sbjct: 395 MLPEVALVKLMWVLA-HEQDLEKIQNLMITNLVGEIN 430
>sp|A6VGK5|GATD_METM7 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=gatD PE=3
SV=1
Length = 418
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 46/366 (12%)
Query: 79 VLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDT 137
+L TGGT+ D + GA+ P+ T D ++ +P + D
Sbjct: 78 ILSTGGTVASRVDYKTGAVHPAF----------------------TADDLIMAVPELLDI 115
Query: 138 RRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSF 196
+ KV+ + S NM +W+ A IKE E+ +G VI HGTDT+ YTASALSF
Sbjct: 116 ANIKGKVILN---ILSENMLPKYWVMTAEAIKEEIENGAEGIVIAHGTDTMHYTASALSF 172
Query: 197 MLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LI 249
M+ N P+I+ G+Q S + SD N I A + A I V V + + L
Sbjct: 173 MV-NSEVPIILVGAQRSSDRPSSDAALNIISA-VKAATEPIKGVYVLMHGETGDTVCHLH 230
Query: 250 RGNRTVKMSVKEFDAFDSPNFPNLAKVG-LTIDVNMKSIFRS---STIKKFDVQSQLNLN 305
G + K+ DAF S N A++ T +V ++ S IK+ + + L
Sbjct: 231 EGTKVRKLHSSRRDAFKSVNKTPFAEINPFTKEVKYLRDVKNQDKSKIKEIVLNTNLEEK 290
Query: 306 VGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNC 365
V ++++YP I + ++ ++ +G+IL G G+ P + ID A++ NV++
Sbjct: 291 VALIKVYPGIDSEILKFYVDKGYKGIILEGTGLGHTPETFFEGID---YANENNVLVAMT 347
Query: 366 SQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTN 424
+Q G + + Y G+ L GVI DM E A KL Y+L E ++ K++M +
Sbjct: 348 TQTINGRVNMNVYSNGRELQAKGVIPCEDMLSEVAFVKLMYLLGNYE--IEDAKELMSKD 405
Query: 425 IRGELS 430
I GE++
Sbjct: 406 IAGEIN 411
>sp|A4FWR5|GATD_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatD PE=3
SV=1
Length = 418
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 52/369 (14%)
Query: 79 VLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDT 137
+L TGGT+ D + GA+ P+ T D + +P + D
Sbjct: 78 ILSTGGTVASRVDYKTGAVHPAF----------------------TADDLIRAVPELMDI 115
Query: 138 RRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSF 196
+ KV+ + S NM +W A+ IKE E+ +G VI HGTDT+ YTASALSF
Sbjct: 116 ANIKGKVILN---ILSENMLPAYWKMTADAIKEEIENGAEGIVIAHGTDTMHYTASALSF 172
Query: 197 MLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LI 249
M+ + P+I+ G+Q S + SD N I A + A I V V + + L
Sbjct: 173 MVTS-EVPIILVGAQRSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLH 230
Query: 250 RGNRTVKMSVKEFDAFDSPNF-------PNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQL 302
G + K+ DAF S N P + KV DV + S IK+ + + L
Sbjct: 231 EGTKVRKLHSSRRDAFKSVNETPIAEINPFIKKVTYLRDVKSQD---KSKIKEVVLNTDL 287
Query: 303 NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVII 362
V ++++YP I + ++ ++ + +G+IL G G+ P + ID A++ NV++
Sbjct: 288 EEKVALIKVYPGIDSEILKFYVDNGYKGIILEGTGLGHTPETFFEGID---YANENNVLV 344
Query: 363 VNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIM 421
+Q G + + Y G+ L GVI DM PE A KL ++L ++ K++M
Sbjct: 345 AMTTQTINGRVNMNVYSNGRELQAKGVIPCEDMLPEVAFVKLMHLLGN--YGFEESKELM 402
Query: 422 MTNIRGELS 430
NI GE++
Sbjct: 403 SKNIVGEIN 411
>sp|A9AA46|GATD_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatD PE=3
SV=1
Length = 418
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 46/366 (12%)
Query: 79 VLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDT 137
+L TGGT+ D + GA+ P+ T D + +P + D
Sbjct: 78 ILSTGGTVASRVDYKTGAVHPAF----------------------TADDLIRAVPELMDV 115
Query: 138 RRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSF 196
+ KV+ + S NM +W A IKE E+ +G VI HGTDT+ YTASALSF
Sbjct: 116 ANIKGKVILN---ILSENMLPKYWAMTAEAIKEEIENGAEGIVIAHGTDTMHYTASALSF 172
Query: 197 MLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LI 249
M+ + P+I+ G+Q S + SD N I A + A I V V + + L
Sbjct: 173 MVTS-EVPIILVGAQRSSDRPSSDAALNIIAA-VKAATEPIKGVYVLMHGETGDTVCHLH 230
Query: 250 RGNRTVKMSVKEFDAFDSPNFPNLAKVG-LTIDVNMKSIFRS---STIKKFDVQSQLNLN 305
G + K+ DAF S N +A+V +T +V +S S IK+ + + L
Sbjct: 231 EGTKVRKLHSSRRDAFKSVNKTPIAEVNPVTKEVKYLRDVKSRDKSKIKEVVLNTNLEEK 290
Query: 306 VGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNC 365
V ++++YP I + ++ ++ + +G+IL G G+ P + ID A++ NV++
Sbjct: 291 VALIKVYPGIDSEILKFYVDNGYKGIILEGTGLGHTPETFFEGID---YANENNVLVAMT 347
Query: 366 SQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTN 424
+Q G + + Y G+ L GVI DM E A KL ++L E ++ K++M N
Sbjct: 348 TQTINGRVNMNVYSNGRELQAKGVIPCEDMLSEVAFVKLMHLLGNYE--FEEAKELMPKN 405
Query: 425 IRGELS 430
I GE++
Sbjct: 406 IAGEIN 411
>sp|C3MPS1|GATD_SULIL Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=gatD PE=3
SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFGE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|C3NE01|GATD_SULIY Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=gatD
PE=3 SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFDE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|C3NHQ2|GATD_SULIN Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=gatD
PE=3 SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFDE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|C3MYR5|GATD_SULIM Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=gatD PE=3
SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFDE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|C4KH13|GATD_SULIK Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=gatD PE=3
SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFDE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|C3N5E7|GATD_SULIA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Sulfolobus
islandicus (strain M.16.27) GN=gatD PE=3 SV=1
Length = 445
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 192/391 (49%), Gaps = 56/391 (14%)
Query: 56 QDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLY 114
Q+S+R+ S + +S++ ++ TGGTI + + E GA+ P+
Sbjct: 79 QESERK-----EVSRNGAKSEIKIISTGGTIVSKVEYETGAVRPAL-------------- 119
Query: 115 DRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYY-E 173
T + V LP + + +V +V+ ++ L S NM +W+KIA +K+ + E
Sbjct: 120 --------TTEEIVQFLPEINEIAKVDAEVL-FSIL--SENMKPEYWVKIAESVKKAFDE 168
Query: 174 SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233
G VI HGTDT++YTASAL+F L +L PV++ GSQ S + SD N + A+ A
Sbjct: 169 GNTGVVIAHGTDTMAYTASALAFSLRSLQGPVVLVGSQRSSDRPSSDSAINLLSAVTTAK 228
Query: 234 NYDIPEVTVYFN------HKLI-RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKS 286
EV V + + L+ RG + KM DAF S N LAKV L + +
Sbjct: 229 YAPFGEVVVNMHADSSDTYALVHRGVKVRKMHSSRRDAFQSVNDKPLAKV-LWKERKLVM 287
Query: 287 IFRSSTIKKFD--VQSQLNLNVGILRIYPHISNHTVRSFMQ-----SPMEGVILLTYGSG 339
+ +S KK + + ++ + +L YP + R F++ + + G+I+ G G
Sbjct: 288 LDKSYMSKKGETTLDAKFDNRAFLLYYYPGLD----RDFLEHILTNTKIRGLIIAGTGLG 343
Query: 340 NFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEA 398
+ SD ++ R A+ + I +QC G + + Y G+ L GV DM PE
Sbjct: 344 H---TSSDYVELFRKATKDGIFIGMTTQCLFGRVNMNVYTTGRQLLDAGVTPLEDMLPEV 400
Query: 399 ALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
AL KL +VL+ E L++ + +M++N+ GE+
Sbjct: 401 ALVKLMWVLA-HEQDLEKIRSLMISNLVGEI 430
>sp|Q9HJJ5|GATD_THEAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=gatD PE=3 SV=1
Length = 409
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 182/396 (45%), Gaps = 53/396 (13%)
Query: 46 QVDQDERPLHQDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLT 104
+V+ ER + +R++ + + + K+ VL TGGTI D E GA++P S P
Sbjct: 41 EVEFIERKKEESPERKSIEAVEKGQG--DRKISVLATGGTIASRVDYETGAVSPVSDP-- 96
Query: 105 DKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLD--SSNMCQVHWI 162
L++ G +L R V P+L+ S N+ WI
Sbjct: 97 ------ELIF-----------GGSDILTRF---------TVAVKPILNEFSENLKPADWI 130
Query: 163 KIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGV 222
+I + + DG V+ HGTDT++YT+SAL+FM E + PV+ G+Q S + SD
Sbjct: 131 RIGQAVADESSEADGVVVAHGTDTMAYTSSALAFMFERMRVPVVFVGAQRSSDRPSSDSR 190
Query: 223 HNFIGALILAGNYDIPEVTVYFNH-------KLIRGNRTVKMSVKEFDAFDSPNFPNLAK 275
N A+ AG D+ EV + + L+R R+ KM DAF+S P LA+
Sbjct: 191 ENMQAAINFAGT-DLGEVGISMHASTSDGHVSLLRSVRSRKMHTSRRDAFESIGIPPLAE 249
Query: 276 VGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLT 335
++ + S T+ + + L+ V ++ +P ++ + + M + V++L
Sbjct: 250 YDGSVKFLIDYRRVSDTV---EFRPDLDDRVSMIYFHPGLNAGDLEN-MIAEKHAVVILG 305
Query: 336 YGSGNFPSNRSDLIDEL-RLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYD 393
G G+ DLI + + +D N I+ SQC G T + Y G+ L GVI +
Sbjct: 306 TGLGHMA---KDLIPVVKKYTADGNYAIM-ASQCIYGSTDLNVYSTGRELLAAGVIEAGN 361
Query: 394 MTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
M PE A K Y+L + L +D+ N+RGE+
Sbjct: 362 MVPEVAYVKAMYLLGQYPHDLF--RDLFRKNMRGEI 395
>sp|Q12X65|GATD_METBU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcoides
burtonii (strain DSM 6242) GN=gatD PE=3 SV=1
Length = 415
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 48/369 (13%)
Query: 76 KVLVLYTGGTIGME-DNEQGALAP--SSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLP 132
KV +L TGGTI + D GA+ S+ + D I E L
Sbjct: 76 KVTILSTGGTIASKVDYRTGAVTAQFSADDIVDAIPE---------------------LT 114
Query: 133 RVKDTR-RVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYT 190
+ D RVLY ++ S NM +W ++A + + E+ DG +I HGTDT+ Y+
Sbjct: 115 EIADINGRVLYNIL-------SENMKAEYWTELAGAVAQEIENGADGIIIAHGTDTMMYS 167
Query: 191 ASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH---- 246
A+ALSFML+ PV+ GSQ S + SD N I A +A + DI EV V +
Sbjct: 168 AAALSFMLKT-PVPVVFVGSQRSADRPSSDNAMNAICATKVAVS-DIAEVCVVMHDTTSD 225
Query: 247 ---KLIRGNRTVKMSVKEFDAFDSPNFPNLAKVG-LTIDVNMKSIFRSSTIKKFDVQSQL 302
+ G + KM DAF S N + + T + F +K ++++ L
Sbjct: 226 DRCAIHFGTKVRKMHTSRRDAFQSINSDPIGYIDHSTHKIETVLPFSKRDSQKLELKNTL 285
Query: 303 NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVII 362
+++ P + + ++ S +G+++ G G+ +D I ++ A++ + +
Sbjct: 286 EPKCSLVKFVPGANPDVLSYYIDSGYKGLVIEGTGLGHV---STDWIPNIKRATENGIPV 342
Query: 363 VNCSQCSRGGTSD-TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIM 421
+ SQC G D Y+ G+ + G I G DM PE AL KL + L +S + + K+IM
Sbjct: 343 IMTSQCISGRVCDRVYDTGRDILKAGAIEGEDMLPEVALVKLMWALGQSN-DVDEIKEIM 401
Query: 422 MTNIRGELS 430
+NI E++
Sbjct: 402 RSNIGHEMT 410
>sp|O29380|GATD_ARCFU Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=gatD PE=3 SV=1
Length = 418
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 146/286 (51%), Gaps = 17/286 (5%)
Query: 153 SSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQI 212
S NM +WI++A + + + ++G +I HGTDT+ ++A+ALSFML + KPV+ G+Q
Sbjct: 135 SENMKPENWIELARHVYKALKDHEGVIITHGTDTMHFSAAALSFML-STPKPVVFVGAQR 193
Query: 213 SIFQIRSDGVHNFIGALILAGNYDIPEVTVYF------NHKLI-RGNRTVKMSVKEFDAF 265
S + SD N + A A DI EV V ++ L+ RG + K DAF
Sbjct: 194 SSDRPSSDAAMNLLCA-AKAATEDIGEVVVCMHGSTSDDYCLVHRGVKVRKNHTSRRDAF 252
Query: 266 DSPNFPNLAKVGL-TIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSFM 324
S N + ++ ++ V S ++ + +L V +++ +P +S+ + +
Sbjct: 253 QSVNAKPIGRIDYPSLSVEWLSWRYRRGERELKLTDRLERKVVLIKFFPGLSSDILEYYH 312
Query: 325 QSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSD-TYEAGKIL 383
G ++ G G+ +D ID LR + +V+++ SQC G D Y+ G+ +
Sbjct: 313 SKGYRGFVIEGTGLGHV---STDWIDTLRRVCEDSVVVMT-SQCLWGRVCDRVYDTGRDI 368
Query: 384 SGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
GVI G DM PE AL KL ++L ++++ K+++ ++ GE+
Sbjct: 369 LRAGVIEGEDMLPEVALIKLMWLLGN--YSIEEAKEMVKKSVAGEI 412
>sp|Q9Y9T8|GATD_AERPE Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=gatD PE=3 SV=1
Length = 427
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 165/372 (44%), Gaps = 46/372 (12%)
Query: 74 ESKVLVLYTGGTIGME-DNEQGALAP--SSKPLTDKIRENPLLYDRHYDVCKTQDGNVLV 130
E +V ++ GGTI D E GA+ P + L I E R+ + Q ++L
Sbjct: 73 EERVYIIGAGGTIASRVDYETGAVKPYLDASELATTIPE----LQRYASIEAEQLFSIL- 127
Query: 131 LPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSY 189
S +M W I + E+ YDG V+ HGTDT+++
Sbjct: 128 ----------------------SEDMKPSMWEAIVDRAARVLEAGYDGVVVAHGTDTMAF 165
Query: 190 TASALSFML-ENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKL 248
TASALSF + L PVI+TGSQ S + SD N +++ A EV V + +
Sbjct: 166 TASALSFAFHKGLPSPVILTGSQRSSDRPSSDAAFNLTASVLAASRAPFAEVAVVMHGET 225
Query: 249 I-------RGNRTVKMSVKEFDAFDSPNFPNLAKV-GLTIDVNM-KSIFRSSTIKKFDVQ 299
RG R KM DAF S N LA++ V M + +R +V
Sbjct: 226 GDTYALAHRGVRVKKMHSSRRDAFQSVNDKPLARIYPFEGRVEMLRDDYRRRGESGLEVD 285
Query: 300 SQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRN 359
+ V +++ +P + + + + + +G+++ G G+ SD I + A D+
Sbjct: 286 NGFEERVALVKHFPGLISEVIDALLDRGFKGIVVEGTGFGHV---SSDAIKSIERARDQG 342
Query: 360 VIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKK 418
V IV +Q G + + Y G+ + G I DMT EAA KLS++L+++ L+ +
Sbjct: 343 VPIVITTQTVFGRVNLNVYSTGRKMLAAGAIPAGDMTSEAAYAKLSWILARTR-ELEVVR 401
Query: 419 DIMMTNIRGELS 430
+ N+ GE+S
Sbjct: 402 KMFQRNLAGEVS 413
>sp|Q979L8|GATD_THEVO Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=gatD PE=3 SV=1
Length = 406
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 161/367 (43%), Gaps = 49/367 (13%)
Query: 74 ESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLP 132
E + +L TGGTI D E GA+ P S P L+
Sbjct: 67 EKSISILATGGTIASRVDYETGAVKPVSDPR-------------------------LLFG 101
Query: 133 RVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTAS 192
+ + +VV L S NM WI +A + + + G V+ HGTDT+SYT+S
Sbjct: 102 GTELESKFNIRVVNVMNQL-SENMKPADWIHLARKVMDETKHSSGIVVSHGTDTMSYTSS 160
Query: 193 ALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLI--- 249
AL+FM E L +P+I GSQ S + SD N GA+ A D+ EV + HK I
Sbjct: 161 ALAFMFERLAQPIIFVGSQRSSDRPSSDTKENMEGAINFAAT-DLGEVGIAM-HKGISDG 218
Query: 250 -----RGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNL 304
R R+ KM DAF+S + +LA+ T V S +R + + + L+
Sbjct: 219 SIVLHRAVRSRKMHTSRRDAFESIDTVHLAE--YTSSVRFFSDYRKAEEENL-LLDHLDE 275
Query: 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELR-LASDRNVIIV 363
V I+ +P + V + ++ V+++ G G+ DLI + D N I+
Sbjct: 276 KVSIIYFHPGLVASDVENMIEGK-HAVVIMGTGLGHIA---KDLIPVFKNFTKDGNFAIM 331
Query: 364 NCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMM 422
SQC G + Y G+ L GVI+ DM PE A K + L ++ ++
Sbjct: 332 -TSQCIYGSVDMNVYSTGRELIAAGVISAGDMVPEVAYVKAMFTLGN--YGREEFINVFN 388
Query: 423 TNIRGEL 429
N+RGE+
Sbjct: 389 RNLRGEI 395
>sp|A1RX40|GATD_THEPD Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Thermofilum
pendens (strain Hrk 5) GN=gatD PE=3 SV=1
Length = 451
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)
Query: 153 SSNMCQVHWIKIANDIKEYYES---YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTG 209
S +M HW ++A+ I E + G V+ HGTDTL Y+A+A++F ++ P++ G
Sbjct: 153 SEDMTPSHWQQLASKIGEIFRRESDVKGVVVAHGTDTLHYSAAAMAFAVQEAPGPIVFVG 212
Query: 210 SQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEF 262
+Q S + SD N IGA ++A + E + + + RG R KM
Sbjct: 213 AQRSSDRPSSDAALNVIGATVVAVHAPFAESVIAMHGSVNDDTILVHRGVRARKMHTSRR 272
Query: 263 DAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKK-----FDVQSQLNLNVGILRIYPHISN 317
DAF S N +A+V D S+ S++ K VQ+ + V +++ YP +S
Sbjct: 273 DAFMSINSKPIAEV----DPLRGSLKLSTSTYKGRGDDVVVQASFSDKVALVKFYPGMSP 328
Query: 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DT 376
+++ +G+++ G G+ + LID +R V + SQC G + +
Sbjct: 329 DIFDFYLEKGFKGLVIEGTGLGHV---STALIDSVRRLVREGVFVAMASQCIFGRVNMNV 385
Query: 377 YEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSE 411
Y G L GV+ DM PE A KLS++L ++E
Sbjct: 386 YRTGVELIKAGVVPAGDMIPETAYVKLSWILGQTE 420
>sp|A6UPR4|GATD_METVS Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=gatD
PE=3 SV=1
Length = 426
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 181/393 (46%), Gaps = 48/393 (12%)
Query: 52 RPLHQDSDRRASLTLNSSEDRLESKVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIREN 110
+PL ++ L L + + + +L TGGT+ D + GA+ P+ D IR
Sbjct: 61 QPLTSSNNEFKPLNLEKNPNL--KNISILSTGGTVASRVDYKTGAVHPAFTA-NDLIRAV 117
Query: 111 PLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKE 170
P L D + +K R + ++ S NM +W+ A IKE
Sbjct: 118 PELLD---------------IANIKG--RAILNIL-------SENMLPKYWVMTAEAIKE 153
Query: 171 YYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229
E+ +G VI HGTDT+ YTA+ALSFM+E+ P+I+ G+Q S + SD N I A
Sbjct: 154 EIENGAEGIVITHGTDTMHYTAAALSFMVES-EVPIILVGAQRSSDRPSSDAALNIISA- 211
Query: 230 ILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVG-LTID 281
++A I V V + + L G + K+ DAF S N +AK+ T +
Sbjct: 212 VMAATEPIKGVYVVMHGEIDDTICNLHEGVKVRKLHSSRRDAFKSVNNTPVAKINPFTKE 271
Query: 282 VNMKSIFR---SSTIKKFDVQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGS 338
+ + SS IKK + +L + ++++YP I + ++ ++ + ++L G
Sbjct: 272 ITYLREIKPQNSSKIKKVSINKKLEEKIALIKVYPGIDSEILKFYVDKGYKAIVLEGTGL 331
Query: 339 GNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYDMTPE 397
G+ P ID A+ NV+++ +Q G + + Y G+ L +GV+ D+ E
Sbjct: 332 GHTPETFFSGID---YANKNNVLVLMSTQTINGRVNMNIYSNGRELQSLGVLPCEDILSE 388
Query: 398 AALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
K+ ++L + L+ K ++ N GE++
Sbjct: 389 VLFVKIMHLLGNYD--LKDAKKLICKNRVGEIN 419
>sp|Q46GJ6|GATD_METBF Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatD PE=3 SV=1
Length = 424
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 46/368 (12%)
Query: 76 KVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRV 134
KV +L TGGTI + D GA+ T D + +P +
Sbjct: 85 KVAILSTGGTIASKIDYRTGAVTSQF----------------------TADDILAAIPEL 122
Query: 135 KDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASA 193
++ +V+ + S NM W +A I E E+ DG ++ HGTDT+ YTA+A
Sbjct: 123 REIADFKGRVISS---ILSENMDSESWQNLARAIVEEIEAGADGVIVTHGTDTMMYTAAA 179
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH------- 246
LSFM+E P+++ GSQ S + SD N I A ++A + DI EV+V +
Sbjct: 180 LSFMIETP-VPIVIVGSQRSADRPSSDNAMNAICAALVAIS-DIAEVSVVMHGTTSDDFC 237
Query: 247 KLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT---IDVNMKSIFRSSTIKKFDVQSQLN 303
++ RG + KM DAF S N + V I + I R KF+ +
Sbjct: 238 EIHRGTKVRKMHTSRRDAFKSINSRPIGIVDYNTRKIKTFIDYIKRGERPLKFN--PGME 295
Query: 304 LNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIV 363
+++ P + ++ S G++L G G+ + I +++ A+D + ++
Sbjct: 296 PKCALVKFTPGSGPEILDHYIDSGYRGLVLEGTGLGHVSTK---WIPKIQKATDAKMPVI 352
Query: 364 NCSQCSRGGTSD-TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMM 422
SQC G D Y+ G+ + G I G D PE AL KL +VL +++ + ++
Sbjct: 353 VTSQCLNGRICDRVYDTGRDMLKAGAIEGEDTLPEIALVKLMWVLGQTD-EFNEAVKMLR 411
Query: 423 TNIRGELS 430
+I GE++
Sbjct: 412 EDISGEIT 419
>sp|Q9HP20|GATD_HALSA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=gatD PE=3 SV=1
Length = 427
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 153 SSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S NM W +A ++E E+ DG V++HGTDT+ ++ASALSFMLE PV+ TGSQ
Sbjct: 134 SENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASALSFMLETP-VPVVFTGSQ 192
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH-------KLIRGNRTVKMSVKEFDA 264
S + SD V N + A + A D+ EV V + L RG R K DA
Sbjct: 193 RSADRPSSDNVMNAVCA-VEAAKSDVAEVMVCMHATESDDRCALHRGTRVRKTHTSRRDA 251
Query: 265 FDSPNFPNLAKVGLTI----------DVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPH 314
F++ L V V ++ + DV S L V +++ P
Sbjct: 252 FETVGATPLGYVDYDAASEAATADARGVTVEGAHAARGDATLDVASALEPAVELVKFTPG 311
Query: 315 ISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS 374
++ + + S GV++ G G+ S+ +D I L D +V SQC G
Sbjct: 312 MNESLLAACEGS--AGVVIEGTGLGHVHSDLTDTIGSL---VDDGTTVVMTSQCLEGRVC 366
Query: 375 D-TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431
D Y+ G+ L GV+ D P A KL + L+ ++ + M ++ G L+T
Sbjct: 367 DRVYDTGRDLLAAGVVEAGDTLPGTAKVKLMWALANAD----DPEAAMQESVAGALTT 420
>sp|B0R6H4|GATD_HALS3 Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gatD
PE=3 SV=1
Length = 427
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 133/298 (44%), Gaps = 30/298 (10%)
Query: 153 SSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S NM W +A ++E E+ DG V++HGTDT+ ++ASALSFMLE PV+ TGSQ
Sbjct: 134 SENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASALSFMLETP-VPVVFTGSQ 192
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH-------KLIRGNRTVKMSVKEFDA 264
S + SD V N + A + A D+ EV V + L RG R K DA
Sbjct: 193 RSADRPSSDNVMNAVCA-VEAAKSDVAEVMVCMHATESDDRCALHRGTRVRKTHTSRRDA 251
Query: 265 FDSPNFPNLAKVGLTI----------DVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPH 314
F++ L V V ++ + DV S L V +++ P
Sbjct: 252 FETVGATPLGYVDYDAASEAATADARGVTVEGAHAARGDATLDVASALEPAVELVKFTPG 311
Query: 315 ISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS 374
++ + + S GV++ G G+ S+ +D I L D +V SQC G
Sbjct: 312 MNESLLAACEGS--AGVVIEGTGLGHVHSDLTDTIGSL---VDDGTTVVMTSQCLEGRVC 366
Query: 375 D-TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431
D Y+ G+ L GV+ D P A KL + L+ ++ + M ++ G L+T
Sbjct: 367 DRVYDTGRDLLAAGVVEAGDTLPGTAKVKLMWALANAD----DPEAAMQESVAGALTT 420
>sp|Q8PUM7|GATD_METMA Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatD PE=3 SV=1
Length = 425
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Query: 153 SSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S NM W +A + E E+ DG ++ HGTDT+ Y+A+ALSFM+E P++ GSQ
Sbjct: 139 SENMDPDSWQNLARAVVEEIEAGADGIIVTHGTDTMMYSAAALSFMIETP-VPIVFVGSQ 197
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH-------KLIRGNRTVKMSVKEFDA 264
S + SD N I A +A + DI EV V + ++ RG + KM DA
Sbjct: 198 RSADRPSSDNAMNAICAARVAIS-DIAEVVVVMHGTSSDDYCEIHRGTKVRKMHTSRRDA 256
Query: 265 FDSPNFPNLAKVGLTIDVNMKSI-----FRSSTIKKFDVQSQLNLNVGILRIYPHISNHT 319
F S N + T+D + I + K + + I++ P
Sbjct: 257 FKSVNSLPIG----TVDYDTGEIKTFIEYTGRGEKSLKFKPGMEPKCAIVKFTPGADPSV 312
Query: 320 VRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSD-TYE 378
+ ++ +G++L G G+ + I +R A D + ++ SQC G D Y+
Sbjct: 313 LDCYVDGGYKGLVLEGTGLGHVSTK---WIPFIRRAVDAKMPVIVTSQCLNGRVCDRVYD 369
Query: 379 AGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
G+ + G I G D PE AL KL +VL +++ ++ ++ N+ GE+
Sbjct: 370 TGRDMLKAGAIEGEDTLPETALVKLMWVLGQTD-EFEKAVSMLGENLSGEI 419
>sp|Q18GL3|GATD_HALWD Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Haloquadratum
walsbyi (strain DSM 16790) GN=gatD PE=3 SV=1
Length = 442
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 153 SSNMCQVHWIKIANDIK-EYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S NM W +A + E DG V++HGTDT+ Y+ASALS+ML+ PV+ TGSQ
Sbjct: 156 SENMTPAVWQDLAAAVADEIRAGADGVVVMHGTDTMQYSASALSYMLDTP-VPVVFTGSQ 214
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDA 264
S + SD V N + A + A DI V V + L RG R K DA
Sbjct: 215 RSADRPSSDNVMNAVCA-VEAATADISGVFVCMHASTADDTCALHRGTRVRKNHTSRRDA 273
Query: 265 FDSPNFPNLAKVGL---TIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHTVR 321
F + + K+ T+ + R ST + ++ S+LN +V +L P ++
Sbjct: 274 FKTVGATPIGKIEYDTETVSFHRDHAAREST--ELNLTSELNEDVMLLTFTPGMNIDRQT 331
Query: 322 SFM-QSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSD-TYEA 379
+F+ S +G+I+ G G+ + + E L +D V++ SQC G D Y+
Sbjct: 332 AFLTDSTPDGLIIAGTGLGHVHTEFIPTVAE--LVAD-GVVVAMTSQCIEGRVCDRVYDT 388
Query: 380 GKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGEL 429
G+ L GV+ D P A KL + L+ + M ++ GEL
Sbjct: 389 GRDLLEAGVVEAGDTLPGTAKVKLMWALANH----PDPTNAMRKSLAGEL 434
>sp|Q8TR66|GATD_METAC Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatD PE=3 SV=1
Length = 424
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 164/371 (44%), Gaps = 52/371 (14%)
Query: 76 KVLVLYTGGTIGME-DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRV 134
K+ +L TGGTI + D GA+ T D + +P +
Sbjct: 85 KIAILSTGGTIASKIDYRTGAVTSQF----------------------TADDILAAIPEL 122
Query: 135 KDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASA 193
K+ +V+ + S NM W ++ + E E+ DG ++ HGTDT+ Y+A+A
Sbjct: 123 KEIADFKGRVISS---ILSENMDSDSWQNLSKAVVEEIEAGADGVIVTHGTDTMMYSAAA 179
Query: 194 LSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNH------- 246
LSFM++ P++ GSQ S + SD N I A +A + DI EV V +
Sbjct: 180 LSFMIKTP-VPIVFVGSQRSADRPSSDNAMNAICAARVAIS-DIAEVVVVMHGTTSDDFC 237
Query: 247 KLIRGNRTVKMSVKEFDAFDSPN-FPNLAKVGLTIDVNMKSI-----FRSSTIKKFDVQS 300
++ RG + K+ DAF S N P VG T+D I + K +
Sbjct: 238 EIHRGTKVRKLHTSRRDAFKSVNSLP----VG-TVDYGTGEIKTFIDYTRRGEKALKFKP 292
Query: 301 QLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNV 360
+ +++ P + ++ + +G+++ G G+ + I LR A+D +
Sbjct: 293 GMEPKCALVKFTPGADPTVLDYYISNGYKGLVVEGTGLGHISTK---WIPLLRKATDAKM 349
Query: 361 IIVNCSQCSRGGTSD-TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKD 419
++ SQC G D Y+ G+ + G I G D PE AL KL +VL +++ ++
Sbjct: 350 PVIVTSQCLNGRICDRVYDTGRDMLKAGAIEGEDTLPETALVKLMWVLGQTD-DFEKAAG 408
Query: 420 IMMTNIRGELS 430
++ ++ GE++
Sbjct: 409 MLREDLSGEIT 419
>sp|Q8ZY04|GATD_PYRAE Glutamyl-tRNA(Gln) amidotransferase subunit D OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM
9630 / NBRC 100827) GN=gatD PE=3 SV=1
Length = 417
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 129/295 (43%), Gaps = 30/295 (10%)
Query: 153 SSNMCQVHWIKIANDIKEYYE-SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211
S +M W IA + E ++ G V+LHGTDT+ YTA+AL+F ++ P+ + G+Q
Sbjct: 125 SEDMTPALWGVIAERVAEAFKKGARGVVVLHGTDTMQYTAAALAFAFKSAPGPIALVGAQ 184
Query: 212 ISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHK--------LIRGNRTVKMSVKEFD 263
S + +D V N A+ + E +V HK + RG R KM D
Sbjct: 185 RSSDRPSTDAVLNLKAAIAVTARAPFAE-SVVVMHKTSGDTVVAVHRGTRVRKMHTSRRD 243
Query: 264 AFDSPN-------FPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHIS 316
F S N +P + + DV + D ++ V +++ YP +
Sbjct: 244 TFQSINTTPIAEYYPEKELLQVLTDVYKER-------GGLDYTAKFEEAVALVKFYPGMH 296
Query: 317 NHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-D 375
+ + ++ M+GV++ G G+ + +L D VI+ SQ G +
Sbjct: 297 PRLLEALLEVGMKGVVIEGTGFGHVGEGVLPAVKKL---IDAGVIVAMTSQTLYGRVNLY 353
Query: 376 TYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430
Y G+ L +GVI DM PE A K+S+ L+ ++ ++ T I E+S
Sbjct: 354 VYRRGRELLSMGVIPLEDMLPETAYAKMSWALAN--FKREEVPRVLTTPIAYEMS 406
>sp|Q94A76|GORK_ARATH Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2
Length = 820
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 453 GRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLD 512
G+QE K+ SA +GD ++K + GAD + TD+D R+ LH A G D
Sbjct: 525 GKQEAELALKV------NSAAFQGDFYQLKSLIRSGADPNKTDYDGRSPLHLAACRGYED 578
Query: 513 IVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAA 572
I + ++ GV V+++D + +PL EAV A Q +I LL GA E G+ L
Sbjct: 579 ITLFLIQEGVDVNLKDKFGHTPLFEAVKAGQEGVIGLLVKEGASFNLEDS--GNFLCTTV 636
Query: 573 ARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQS 632
A+G L+ L +G+N N D TPLH A + L+ + +++ G S
Sbjct: 637 AKGDSDFLKRLLSSGMNPNSEDYDHRTPLHVAASEGLFLMAKMLVEAGASVISKDRWGNS 696
Query: 633 AIEVANQMQLNDIIELLK 650
++ A +I+LL+
Sbjct: 697 PLDEARLCGNKKLIKLLE 714
>sp|Q38998|AKT1_ARATH Potassium channel AKT1 OS=Arabidopsis thaliana GN=AKT1 PE=1 SV=2
Length = 857
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 471 SAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNY 530
+A+RE D+ + ++ G D + +D + R LH A S G L+ V LE + RD
Sbjct: 525 AAIREDDL-LLHQLLKRGLDPNESDNNGRTPLHIAASKGTLNCVLLLLEYHADPNCRDAE 583
Query: 531 DISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINL 590
PL EA++ ++++L G+ T + +G AA +G +K L+ +L G ++
Sbjct: 584 GSVPLWEAMVEGHEKVVKVLLEHGS--TIDAGDVGHFACTAAEQGNLKLLKEIVLHGGDV 641
Query: 591 NQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650
+ + G + LH AV NIE V+YLL Q D+ ++ +G + ++A Q DI L +
Sbjct: 642 TRPRATGTSALHTAVCEENIEMVKYLLEQGADVNKQDMHGWTPRDLAEQQGHEDIKALFR 701
Query: 651 SSETKSKVH 659
+ +VH
Sbjct: 702 EKLHERRVH 710
>sp|Q8TC84|FANK1_HUMAN Fibronectin type 3 and ankyrin repeat domains protein 1 OS=Homo
sapiens GN=FANK1 PE=2 SV=3
Length = 345
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 420 IMMTNIRGELSTDAIHN----NELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVRE 475
+ ++ R +S++ +H N+ DL + + GR +++ K + AL +A ++
Sbjct: 100 VSVSTTREPISSEHLHRAVSVNDEDLLVRILQ----GGRVKVDVPNKFGFTALMVAA-QK 154
Query: 476 GDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPL 535
G +K + + G D+++ + ++ L AC G LD+VKY +G S RD + L
Sbjct: 155 GYTRLVKILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRRHGASWQARDLGGCTAL 214
Query: 536 HEAVIADQHDIIRLLRH--CGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLL-AGINLNQ 592
H A +I + C + + ++ +A G +R+ S L+ AG N+N
Sbjct: 215 HWAADGGHCSVIEWMIKDGCEVDVVDTGSGWTPLMRVSAVSGN-QRVASLLIDAGANVNV 273
Query: 593 VDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSS 652
D G TPL AVLNN+ E V+ LL + D +++N+ G+ +E+A ++ LL+
Sbjct: 274 KDRNGKTPLMVAVLNNHEELVQLLLDKGADASVKNEFGKGVLEMARVFDRQSVVSLLEER 333
Query: 653 ETKSK 657
+ K +
Sbjct: 334 KKKQR 338
>sp|Q9NU02|ANKR5_HUMAN Ankyrin repeat domain-containing protein 5 OS=Homo sapiens
GN=ANKRD5 PE=2 SV=2
Length = 776
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 33/178 (18%)
Query: 473 VREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDI 532
+ GD+ +K+ G + M D + L TAC+ G +D+VK+ LE G +V+ DN+
Sbjct: 500 TKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLW 559
Query: 533 SPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQ 592
+PLH A A Q DI+ LL GA L +AA+ IN
Sbjct: 560 TPLHFACHAGQQDIVELLVESGA------------LIDAAS--------------IN--- 590
Query: 593 VDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650
TPL+ A+ + +++V+YLL +EN+ G SA++VA II+L+K
Sbjct: 591 ----NSTPLNRAIESCRLDTVKYLLDIGAKFQLENRKGHSAMDVAKAYADYRIIDLIK 644
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 460 LKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLE 519
+K Y +A G+ID +K + GA+++ TD LH AC G+ DIV+ +E
Sbjct: 520 MKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIVELLVE 579
Query: 520 NGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNE 560
+G + + +PL+ A+ + + D ++ L GA E
Sbjct: 580 SGALIDAASINNSTPLNRAIESCRLDTVKYLLDIGAKFQLE 620
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 566 DVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTI 625
+++T A G + L+ +GI ++ D+ TPL A + NI+ V++LL + ++
Sbjct: 497 NIITKA---GDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNA 553
Query: 626 ENKNGQSAIEVANQMQLNDIIELLKSS 652
+ + + A DI+ELL S
Sbjct: 554 TDNFLWTPLHFACHAGQQDIVELLVES 580
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 472 AVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYD 531
A REG ++ ++ + G +++ D DR + H A G DI+K V +
Sbjct: 192 ASREGVVEIVRGILERGGEVNAFDNDRHHAAHFAAKGGFFDILKLLFAYNGDVGLISING 251
Query: 532 ISPLHEAVIADQHDIIRLLRHCGAHL 557
+PLH A + D + + G L
Sbjct: 252 NTPLHYAAMGGFADCCKYIAQRGCDL 277
>sp|P30363|ASPG_BACLI L-asparaginase OS=Bacillus licheniformis GN=ansA PE=3 SV=1
Length = 322
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 151/355 (42%), Gaps = 46/355 (12%)
Query: 73 LESKVLVLYTGGTIGMEDNEQGALAPS--SKPLTDKIRENPLLYDRHYDVCKTQDGNVLV 130
+ KV ++ TGGTI E G LA S P ++ P +D + V
Sbjct: 1 MNKKVALITTGGTIASRKTESGRLAAGAISGPELAEMCSLP------------EDVQIDV 48
Query: 131 LPRVKDTRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLS 188
P + L S ++ H +++ I+ ++ YDG V+ HGTDTL
Sbjct: 49 YPAFQ---------------LPSMHITFQHLLELKQTIERVFQDGGYDGAVVTHGTDTLE 93
Query: 189 YTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDI--PEVTVYFNH 246
TA L +E+ +PV+VTGSQ + Q +D N A+ A + DI V FN
Sbjct: 94 ETAYFLDLTIEDE-RPVVVTGSQRAPEQQGTDAYTNIRHAVYTACSPDIKGAGTVVVFNE 152
Query: 247 KLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNL-N 305
++ K+ FD F L ID N K +K+ Q Q L
Sbjct: 153 RIFNARYVKKVHASNLQGFDVFGFGYLG----IID-NDKVYVYQKLLKRDVHQLQRPLPA 207
Query: 306 VGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNC 365
V I++ Y +R+ ++ +EG++L G G P N ++ ++ A ++ V IV
Sbjct: 208 VDIVKCYLDGDGKFIRAAVREGVEGIVLEGVGRGQVPPN---MMADIEQALNQGVYIVIT 264
Query: 366 SQCSRGGTSDTYE-AGKI--LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQK 417
+ G TY+ AG L+ GVI G D + A KL+ +L+ + ++ K
Sbjct: 265 TSAEEGEVYTTYDYAGSSYDLAKKGVILGKDYDSKKARMKLAVLLASYKEGIKDK 319
>sp|Q9Z2X2|PSD10_MOUSE 26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus
GN=Psmd10 PE=1 SV=3
Length = 231
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 476 GDIDKIKEMQNYGADISM---TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDI 532
G +D++KE AD S+ TD D R LH ACS G +IV++ L+ GV V+ +D+
Sbjct: 17 GKLDELKE--RILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW 74
Query: 533 SPLHEAVIADQHDIIRLLRHCGAHLTN------EPM------------------------ 562
SPLH A A + +I++ L GAH+ P+
Sbjct: 75 SPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134
Query: 563 ---FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619
+ + AAA+G +K + L + N D+ G TPLH A +E ++L++Q
Sbjct: 135 KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194
Query: 620 HVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656
+ IENK ++ ++VA + L I++ L SE S
Sbjct: 195 GASIYIENKEEKTPLQVA-KGGLGLILKRLAESEEAS 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,421,889
Number of Sequences: 539616
Number of extensions: 10299725
Number of successful extensions: 33559
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 28152
Number of HSP's gapped (non-prelim): 3364
length of query: 659
length of database: 191,569,459
effective HSP length: 124
effective length of query: 535
effective length of database: 124,657,075
effective search space: 66691535125
effective search space used: 66691535125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)