Query psy9757
Match_columns 659
No_of_seqs 514 out of 4931
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 18:48:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9757.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9757hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09461 ansA cytoplasmic aspa 100.0 2.1E-76 4.4E-81 622.6 36.7 332 74-430 3-335 (335)
2 TIGR00519 asnASE_I L-asparagin 100.0 1.9E-76 4.1E-81 623.1 35.5 326 74-430 1-335 (336)
3 TIGR02153 gatD_arch glutamyl-t 100.0 5.2E-76 1.1E-80 627.6 36.5 332 69-431 57-400 (404)
4 PRK04183 glutamyl-tRNA(Gln) am 100.0 1.6E-75 3.4E-80 625.7 36.6 329 71-431 72-413 (419)
5 cd00411 Asparaginase Asparagin 100.0 5.5E-73 1.2E-77 595.0 35.5 318 75-421 1-323 (323)
6 smart00870 Asparaginase Aspara 100.0 1.2E-71 2.6E-76 585.4 33.6 313 77-416 1-321 (323)
7 TIGR00520 asnASE_II L-asparagi 100.0 7.7E-71 1.7E-75 579.8 36.3 324 65-423 15-348 (349)
8 COG0252 AnsB L-asparaginase/ar 100.0 1.3E-70 2.9E-75 573.3 33.4 328 71-425 16-349 (351)
9 PRK11096 ansB L-asparaginase I 100.0 5.4E-70 1.2E-74 572.1 35.8 322 71-423 19-346 (347)
10 PF00710 Asparaginase: Asparag 100.0 8E-71 1.7E-75 577.3 28.3 311 76-418 1-313 (313)
11 KOG0503|consensus 100.0 2.2E-59 4.8E-64 471.4 20.9 361 31-427 3-368 (368)
12 KOG4412|consensus 100.0 3.3E-34 7.2E-39 262.6 14.5 195 452-647 25-221 (226)
13 PHA02791 ankyrin-like protein; 100.0 1.7E-32 3.8E-37 283.3 26.1 194 461-658 26-222 (284)
14 KOG4412|consensus 100.0 1.5E-33 3.2E-38 258.4 14.2 191 467-657 5-199 (226)
15 PHA02875 ankyrin repeat protei 100.0 1.4E-30 3.1E-35 286.0 25.3 219 434-658 10-230 (413)
16 PHA03100 ankyrin repeat protei 100.0 1.7E-30 3.8E-35 290.8 23.6 217 435-657 82-310 (480)
17 PHA02791 ankyrin-like protein; 100.0 3.4E-30 7.4E-35 266.3 22.1 206 435-656 39-246 (284)
18 PHA02874 ankyrin repeat protei 100.0 7.1E-30 1.5E-34 282.3 26.0 238 413-658 13-283 (434)
19 PHA02875 ankyrin repeat protei 100.0 5.8E-30 1.3E-34 281.2 25.0 193 466-658 3-196 (413)
20 PHA02878 ankyrin repeat protei 100.0 1E-29 2.2E-34 284.3 25.9 193 464-658 36-295 (477)
21 PHA03100 ankyrin repeat protei 100.0 1.4E-29 2.9E-34 283.6 24.0 220 433-658 42-278 (480)
22 PHA02946 ankyin-like protein; 100.0 4.5E-29 9.9E-34 275.3 24.1 202 451-655 59-268 (446)
23 PHA02716 CPXV016; CPX019; EVM0 100.0 4E-29 8.7E-34 284.7 23.7 214 437-655 153-428 (764)
24 PHA03095 ankyrin-like protein; 100.0 1.1E-28 2.4E-33 275.5 26.1 191 466-656 118-316 (471)
25 PHA02874 ankyrin repeat protei 100.0 1.4E-28 3E-33 271.9 24.9 252 400-656 36-315 (434)
26 PHA02798 ankyrin-like protein; 100.0 7.1E-29 1.5E-33 278.2 22.8 205 452-657 59-318 (489)
27 KOG0509|consensus 100.0 1.9E-29 4.2E-34 271.5 16.4 201 435-640 53-255 (600)
28 PHA02946 ankyin-like protein; 100.0 3.3E-28 7.1E-33 268.4 25.9 191 465-657 37-236 (446)
29 PHA02989 ankyrin repeat protei 100.0 2.3E-28 4.9E-33 274.5 23.9 208 445-655 90-314 (494)
30 PHA03095 ankyrin-like protein; 100.0 4.7E-28 1E-32 270.4 24.5 215 438-658 62-285 (471)
31 KOG0509|consensus 100.0 8.5E-29 1.8E-33 266.6 16.8 188 469-656 48-238 (600)
32 PHA02878 ankyrin repeat protei 100.0 4.1E-28 8.9E-33 271.4 23.1 171 480-652 149-323 (477)
33 PHA02716 CPXV016; CPX019; EVM0 100.0 6.7E-28 1.4E-32 274.8 24.1 187 471-657 290-567 (764)
34 PHA02859 ankyrin repeat protei 100.0 1.2E-27 2.5E-32 238.1 21.5 174 465-641 21-203 (209)
35 PHA02989 ankyrin repeat protei 100.0 2.3E-27 5E-32 266.3 24.3 205 451-658 57-284 (494)
36 PHA02876 ankyrin repeat protei 100.0 4.3E-27 9.3E-32 274.3 27.1 204 454-658 263-471 (682)
37 KOG0508|consensus 100.0 4.1E-28 8.9E-33 250.7 15.8 190 464-654 41-239 (615)
38 PHA02795 ankyrin-like protein; 100.0 5.2E-27 1.1E-31 251.7 22.9 185 471-657 83-289 (437)
39 PHA02876 ankyrin repeat protei 100.0 8.5E-27 1.8E-31 271.8 25.5 192 465-656 178-401 (682)
40 PHA02798 ankyrin-like protein; 99.9 1.1E-26 2.5E-31 260.4 23.3 187 472-658 45-286 (489)
41 KOG0510|consensus 99.9 3.6E-26 7.9E-31 250.1 19.6 205 452-657 175-404 (929)
42 PHA02917 ankyrin-like protein; 99.9 1.3E-25 2.8E-30 257.3 23.9 194 460-656 27-256 (661)
43 KOG0510|consensus 99.9 8E-26 1.7E-30 247.4 19.5 201 455-656 145-367 (929)
44 PHA02859 ankyrin repeat protei 99.9 2.2E-24 4.7E-29 214.6 19.6 161 495-658 18-187 (209)
45 PLN03192 Voltage-dependent pot 99.9 2.9E-24 6.3E-29 254.5 22.2 176 465-642 525-701 (823)
46 PHA02730 ankyrin-like protein; 99.9 3.6E-24 7.9E-29 240.0 21.6 197 455-651 31-258 (672)
47 KOG0508|consensus 99.9 1.1E-24 2.3E-29 225.6 15.7 205 413-618 28-236 (615)
48 PHA02730 ankyrin-like protein; 99.9 8.9E-24 1.9E-28 236.9 22.7 143 512-655 360-523 (672)
49 PHA02795 ankyrin-like protein; 99.9 5.5E-24 1.2E-28 228.5 20.0 186 461-653 112-313 (437)
50 PHA02917 ankyrin-like protein; 99.9 7.2E-24 1.6E-28 242.9 22.1 213 435-656 44-302 (661)
51 KOG4177|consensus 99.9 6.8E-24 1.5E-28 246.1 15.2 191 465-655 440-631 (1143)
52 PHA02792 ankyrin-like protein; 99.9 7E-23 1.5E-27 227.4 20.5 216 435-658 81-438 (631)
53 KOG0502|consensus 99.9 6.9E-24 1.5E-28 200.2 10.4 213 432-652 68-280 (296)
54 PLN03192 Voltage-dependent pot 99.9 1.8E-22 3.8E-27 239.3 24.9 183 472-658 501-683 (823)
55 KOG4177|consensus 99.9 4.9E-24 1.1E-28 247.2 11.2 218 435-658 383-601 (1143)
56 PHA02792 ankyrin-like protein; 99.9 7.8E-22 1.7E-26 219.1 21.4 196 460-657 170-480 (631)
57 KOG0514|consensus 99.9 8.5E-23 1.8E-27 205.8 11.5 161 491-652 261-429 (452)
58 PHA02743 Viral ankyrin protein 99.9 2.1E-21 4.6E-26 186.0 15.2 145 487-631 9-162 (166)
59 KOG0502|consensus 99.9 4E-22 8.7E-27 188.4 7.3 167 466-635 130-296 (296)
60 TIGR00870 trp transient-recept 99.9 2.9E-21 6.2E-26 227.4 16.2 190 462-655 49-282 (743)
61 KOG0505|consensus 99.9 3.5E-21 7.7E-26 203.8 13.5 188 468-655 43-256 (527)
62 KOG0507|consensus 99.8 4E-21 8.7E-26 209.4 12.6 194 463-657 47-248 (854)
63 KOG0514|consensus 99.8 1.9E-20 4.1E-25 188.9 13.9 159 460-619 263-429 (452)
64 PHA02743 Viral ankyrin protein 99.8 2.6E-20 5.7E-25 178.5 14.1 138 520-657 9-155 (166)
65 TIGR00870 trp transient-recept 99.8 3.3E-20 7.2E-25 218.4 17.6 186 466-655 18-242 (743)
66 PHA02884 ankyrin repeat protei 99.8 1.2E-19 2.6E-24 188.0 18.5 155 459-621 27-186 (300)
67 PHA02884 ankyrin repeat protei 99.8 1.2E-19 2.5E-24 188.0 17.5 155 492-654 26-186 (300)
68 PHA02741 hypothetical protein; 99.8 7.2E-20 1.6E-24 176.0 14.8 131 492-622 15-157 (169)
69 PHA02741 hypothetical protein; 99.8 9.4E-20 2E-24 175.2 14.4 131 525-655 15-157 (169)
70 KOG0507|consensus 99.8 9.4E-20 2E-24 198.8 12.9 190 469-658 7-217 (854)
71 PHA02736 Viral ankyrin protein 99.8 1.2E-19 2.6E-24 171.6 11.4 97 561-657 52-153 (154)
72 KOG0505|consensus 99.8 8.8E-20 1.9E-24 193.3 11.2 178 462-639 70-273 (527)
73 PHA02736 Viral ankyrin protein 99.8 1.5E-19 3.2E-24 171.1 11.4 132 491-624 10-153 (154)
74 KOG0512|consensus 99.8 3.9E-18 8.4E-23 156.0 13.0 141 468-608 66-209 (228)
75 KOG0512|consensus 99.8 8.9E-18 1.9E-22 153.7 13.1 143 500-642 65-210 (228)
76 KOG0195|consensus 99.7 4.6E-18 9.9E-23 166.7 6.7 131 474-604 9-140 (448)
77 KOG3676|consensus 99.7 5.7E-17 1.2E-21 179.7 14.7 185 468-652 104-330 (782)
78 KOG4369|consensus 99.7 1.7E-17 3.7E-22 185.3 6.4 191 467-657 792-986 (2131)
79 PF12796 Ank_2: Ankyrin repeat 99.7 1.7E-16 3.7E-21 135.4 11.3 89 469-561 1-89 (89)
80 KOG0195|consensus 99.7 3.2E-17 6.8E-22 160.8 7.2 109 463-571 32-140 (448)
81 cd00204 ANK ankyrin repeats; 99.7 1.5E-15 3.2E-20 136.2 15.6 122 495-616 4-125 (126)
82 KOG4369|consensus 99.7 5.8E-17 1.3E-21 181.1 7.0 206 453-658 812-1022(2131)
83 cd00204 ANK ankyrin repeats; 99.7 2.1E-15 4.6E-20 135.1 15.7 125 526-650 2-126 (126)
84 PF12796 Ank_2: Ankyrin repeat 99.7 6.8E-16 1.5E-20 131.7 11.5 88 535-626 1-88 (89)
85 KOG3676|consensus 99.6 1.2E-14 2.7E-19 161.3 15.9 158 462-619 140-330 (782)
86 COG0666 Arp FOG: Ankyrin repea 99.5 3.2E-13 7E-18 133.8 17.7 129 492-620 67-203 (235)
87 COG0666 Arp FOG: Ankyrin repea 99.5 6.7E-13 1.4E-17 131.5 17.8 131 523-653 65-203 (235)
88 KOG4214|consensus 99.5 7.4E-14 1.6E-18 115.2 8.4 99 469-568 6-104 (117)
89 KOG4214|consensus 99.4 4.1E-13 8.8E-18 110.8 7.4 102 535-637 6-107 (117)
90 PTZ00322 6-phosphofructo-2-kin 99.4 3.1E-12 6.7E-17 148.2 12.3 106 467-572 84-196 (664)
91 PTZ00322 6-phosphofructo-2-kin 99.3 5.7E-12 1.2E-16 145.9 12.8 101 535-635 86-193 (664)
92 KOG0515|consensus 99.3 6.4E-12 1.4E-16 132.5 9.7 118 468-585 553-673 (752)
93 PF13857 Ank_5: Ankyrin repeat 99.3 3E-12 6.4E-17 99.3 4.7 55 583-637 1-56 (56)
94 KOG0515|consensus 99.3 1E-11 2.2E-16 131.1 9.9 113 538-650 557-672 (752)
95 PF13857 Ank_5: Ankyrin repeat 99.3 3.3E-12 7.2E-17 99.0 4.6 55 484-538 1-56 (56)
96 PF13637 Ank_4: Ankyrin repeat 99.3 9.4E-12 2E-16 95.7 6.7 54 498-551 1-54 (54)
97 KOG1710|consensus 99.3 3.3E-11 7.3E-16 118.9 11.3 119 498-616 12-131 (396)
98 KOG1710|consensus 99.3 3.7E-11 8.1E-16 118.6 11.3 117 467-583 14-131 (396)
99 PF13637 Ank_4: Ankyrin repeat 99.2 2.1E-11 4.4E-16 93.8 6.7 54 597-650 1-54 (54)
100 KOG0506|consensus 98.7 1.4E-08 3E-13 106.6 5.4 92 563-654 505-597 (622)
101 KOG0506|consensus 98.7 1.7E-08 3.6E-13 106.0 5.4 88 468-555 509-597 (622)
102 KOG0783|consensus 98.6 2.5E-08 5.5E-13 110.6 3.4 82 492-573 46-128 (1267)
103 KOG0818|consensus 98.6 1.9E-07 4.2E-12 98.6 9.4 85 567-651 136-221 (669)
104 KOG0818|consensus 98.5 3.1E-07 6.7E-12 97.1 9.4 86 467-552 135-221 (669)
105 KOG0783|consensus 98.5 4.8E-08 1E-12 108.5 3.5 83 524-606 45-128 (1267)
106 KOG0782|consensus 98.5 2.9E-07 6.2E-12 98.4 8.9 117 502-618 870-988 (1004)
107 PF13606 Ank_3: Ankyrin repeat 98.5 1.8E-07 3.9E-12 62.4 4.0 29 497-525 1-29 (30)
108 KOG0782|consensus 98.5 5.1E-07 1.1E-11 96.5 9.1 119 535-653 870-990 (1004)
109 KOG0705|consensus 98.4 5.2E-07 1.1E-11 97.1 8.2 89 469-557 628-720 (749)
110 PF13606 Ank_3: Ankyrin repeat 98.4 2.9E-07 6.2E-12 61.4 4.0 29 596-624 1-29 (30)
111 PF00023 Ank: Ankyrin repeat H 98.4 3.7E-07 8.1E-12 62.4 4.4 33 497-529 1-33 (33)
112 KOG0705|consensus 98.4 8.7E-07 1.9E-11 95.4 8.5 95 563-657 623-721 (749)
113 PF00023 Ank: Ankyrin repeat H 98.4 4.9E-07 1.1E-11 61.8 4.3 33 596-628 1-33 (33)
114 KOG0522|consensus 98.2 2.9E-06 6.3E-11 91.1 7.8 88 466-553 21-110 (560)
115 KOG0522|consensus 98.2 4.2E-06 9.1E-11 89.9 7.7 86 534-619 23-110 (560)
116 KOG3609|consensus 98.1 9.8E-06 2.1E-10 91.9 9.9 117 469-592 29-159 (822)
117 KOG0521|consensus 98.1 1.8E-06 3.9E-11 100.3 3.9 113 530-650 630-742 (785)
118 KOG0511|consensus 98.0 1.3E-05 2.9E-10 82.6 7.4 82 469-553 40-121 (516)
119 KOG2384|consensus 98.0 1.3E-05 2.7E-10 75.7 6.2 63 589-651 4-67 (223)
120 KOG0511|consensus 97.9 4E-05 8.6E-10 79.1 8.6 75 499-574 37-111 (516)
121 KOG3609|consensus 97.9 4.7E-05 1E-09 86.5 9.7 123 497-626 24-160 (822)
122 KOG2384|consensus 97.8 3.9E-05 8.5E-10 72.4 6.5 69 488-556 2-71 (223)
123 KOG0520|consensus 97.8 3.6E-05 7.8E-10 89.1 7.4 124 462-586 571-702 (975)
124 KOG0521|consensus 97.8 3.3E-05 7.2E-10 89.9 6.2 88 496-583 654-741 (785)
125 KOG0520|consensus 97.7 4E-05 8.7E-10 88.8 5.3 127 492-619 568-702 (975)
126 KOG2505|consensus 96.3 0.006 1.3E-07 65.7 5.6 63 577-639 404-472 (591)
127 smart00248 ANK ankyrin repeats 96.1 0.011 2.3E-07 37.1 4.1 27 498-524 2-28 (30)
128 KOG2505|consensus 96.0 0.0099 2.2E-07 64.0 5.6 64 476-539 402-471 (591)
129 smart00248 ANK ankyrin repeats 95.9 0.014 3E-07 36.6 4.1 27 597-623 2-28 (30)
130 PF03158 DUF249: Multigene fam 95.9 0.054 1.2E-06 51.6 9.4 46 600-651 146-191 (192)
131 PF03158 DUF249: Multigene fam 95.0 0.18 3.9E-06 48.1 9.6 140 465-618 46-191 (192)
132 PF06128 Shigella_OspC: Shigel 94.5 0.21 4.5E-06 49.1 8.9 118 469-622 157-279 (284)
133 PF06128 Shigella_OspC: Shigel 89.8 1.6 3.4E-05 43.1 8.2 90 466-556 180-279 (284)
134 PF11929 DUF3447: Domain of un 83.5 2.3 4.9E-05 34.8 4.9 47 467-520 8-54 (76)
135 PF11929 DUF3447: Domain of un 80.5 2.5 5.4E-05 34.6 4.0 48 565-619 7-54 (76)
136 PRK05632 phosphate acetyltrans 71.5 1E+02 0.0023 36.4 15.8 64 310-385 249-317 (684)
137 TIGR01917 gly_red_sel_B glycin 56.4 52 0.0011 36.0 8.6 56 160-215 320-377 (431)
138 PF07085 DRTGG: DRTGG domain; 56.4 21 0.00045 31.0 4.8 49 311-367 45-93 (105)
139 COG1879 RbsB ABC-type sugar tr 48.9 35 0.00076 35.8 6.1 47 319-372 83-129 (322)
140 TIGR01918 various_sel_PB selen 48.6 67 0.0015 35.2 7.9 54 162-215 322-377 (431)
141 cd02187 beta_tubulin The tubul 48.6 51 0.0011 36.5 7.4 94 156-250 107-208 (425)
142 KOG3614|consensus 45.8 1E+02 0.0022 38.5 9.5 54 469-524 397-451 (1381)
143 PLN00220 tubulin beta chain; P 45.3 52 0.0011 36.7 6.8 94 156-249 108-208 (447)
144 PRK15408 autoinducer 2-binding 44.6 49 0.0011 35.3 6.3 44 318-368 71-114 (336)
145 PF13407 Peripla_BP_4: Peripla 42.9 41 0.00089 33.6 5.2 55 306-368 31-89 (257)
146 cd00578 L-fuc_L-ara-isomerases 42.6 59 0.0013 36.3 6.8 65 156-228 47-111 (452)
147 TIGR01303 IMP_DH_rel_1 IMP deh 40.9 3.4E+02 0.0074 30.6 12.4 55 305-364 215-271 (475)
148 TIGR02717 AcCoA-syn-alpha acet 39.3 1.5E+02 0.0032 33.1 9.3 108 70-208 291-408 (447)
149 cd06299 PBP1_LacI_like_13 Liga 38.8 2E+02 0.0043 28.6 9.6 50 157-213 40-89 (265)
150 PRK02929 L-arabinose isomerase 38.4 74 0.0016 36.0 6.7 68 157-228 56-126 (499)
151 cd02188 gamma_tubulin Gamma-tu 38.3 80 0.0017 35.0 6.9 93 156-249 108-209 (431)
152 PTZ00010 tubulin beta chain; P 38.2 79 0.0017 35.3 6.9 94 157-250 109-209 (445)
153 TIGR02637 RhaS rhamnose ABC tr 37.2 66 0.0014 33.2 5.8 44 318-368 47-90 (302)
154 PF02662 FlpD: Methyl-viologen 37.0 76 0.0017 28.6 5.4 41 302-342 25-67 (124)
155 cd06311 PBP1_ABC_sugar_binding 35.4 1E+02 0.0022 31.1 6.8 56 306-368 35-94 (274)
156 PF10649 DUF2478: Protein of u 35.1 64 0.0014 30.5 4.7 47 319-367 85-131 (159)
157 smart00864 Tubulin Tubulin/Fts 35.0 80 0.0017 30.7 5.6 92 156-249 64-157 (192)
158 cd06321 PBP1_ABC_sugar_binding 34.2 1.7E+02 0.0037 29.3 8.3 59 305-370 31-93 (271)
159 cd06292 PBP1_LacI_like_10 Liga 32.8 2.8E+02 0.006 27.7 9.6 71 157-230 40-115 (273)
160 cd01539 PBP1_GGBP Periplasmic 32.5 1.5E+02 0.0034 30.5 7.7 57 305-368 31-91 (303)
161 cd06278 PBP1_LacI_like_2 Ligan 31.4 2.3E+02 0.005 28.0 8.6 57 173-234 53-112 (266)
162 PRK09701 D-allose transporter 30.6 89 0.0019 32.6 5.6 45 318-369 73-117 (311)
163 COG0028 IlvB Thiamine pyrophos 30.6 2.7E+02 0.0058 32.0 9.7 177 173-374 62-242 (550)
164 KOG0503|consensus 30.3 28 0.0006 37.0 1.5 90 73-170 22-115 (368)
165 cd06267 PBP1_LacI_sugar_bindin 29.8 2.1E+02 0.0045 28.0 7.9 50 158-214 41-90 (264)
166 cd03557 L-arabinose_isomerase 29.5 1.4E+02 0.003 33.8 6.9 52 173-228 65-120 (484)
167 cd01545 PBP1_SalR Ligand-bindi 29.0 3.3E+02 0.0073 26.9 9.4 57 173-233 55-114 (270)
168 cd01541 PBP1_AraR Ligand-bindi 27.8 2E+02 0.0044 28.7 7.6 60 306-369 30-93 (273)
169 cd01541 PBP1_AraR Ligand-bindi 27.3 1.6E+02 0.0035 29.5 6.7 40 173-213 54-94 (273)
170 KOG1185|consensus 27.3 2.2E+02 0.0047 31.9 7.6 161 164-359 385-549 (571)
171 PRK08322 acetolactate synthase 27.0 1.7E+02 0.0036 33.5 7.4 45 176-222 64-109 (547)
172 cd06059 Tubulin The tubulin su 26.7 1.6E+02 0.0035 32.0 6.8 93 157-249 68-167 (382)
173 COG4213 XylF ABC-type xylose t 26.6 92 0.002 32.7 4.5 53 318-377 72-124 (341)
174 PF01220 DHquinase_II: Dehydro 26.5 1.3E+02 0.0029 27.8 5.1 45 160-206 52-96 (140)
175 cd02201 FtsZ_type1 FtsZ is a G 26.5 3.2E+02 0.007 28.6 8.9 88 159-250 69-160 (304)
176 cd07023 S49_Sppa_N_C Signal pe 25.9 1.6E+02 0.0034 28.9 6.1 42 326-367 33-74 (208)
177 PF00091 Tubulin: Tubulin/FtsZ 25.9 1.5E+02 0.0032 29.3 5.9 91 158-249 104-200 (216)
178 cd06292 PBP1_LacI_like_10 Liga 25.6 1.5E+02 0.0033 29.7 6.1 50 318-371 46-95 (273)
179 TIGR02634 xylF D-xylose ABC tr 25.5 4.4E+02 0.0096 27.1 9.7 74 154-232 36-113 (302)
180 KOG1432|consensus 25.2 1.5E+02 0.0033 31.6 5.8 52 190-243 88-141 (379)
181 PF00389 2-Hacid_dh: D-isomer 24.9 1.7E+02 0.0038 26.1 5.7 52 306-368 41-92 (133)
182 PRK05858 hypothetical protein; 24.9 2.3E+02 0.005 32.3 8.0 47 176-224 68-115 (542)
183 PF04122 CW_binding_2: Putativ 24.8 1.9E+02 0.0041 24.1 5.5 48 160-209 7-57 (92)
184 cd06318 PBP1_ABC_sugar_binding 24.5 1.4E+02 0.003 30.2 5.5 43 319-368 47-89 (282)
185 TIGR00713 hemL glutamate-1-sem 24.5 9.3E+02 0.02 26.2 14.6 48 315-363 180-233 (423)
186 cd06320 PBP1_allose_binding Pe 24.4 1.3E+02 0.0029 30.2 5.4 44 318-368 48-91 (275)
187 PF03641 Lysine_decarbox: Poss 24.3 1.3E+02 0.0029 27.2 4.8 50 173-227 52-104 (133)
188 PRK13015 3-dehydroquinate dehy 24.2 1.4E+02 0.003 27.8 4.7 44 161-206 54-97 (146)
189 PLN00222 tubulin gamma chain; 24.1 1.6E+02 0.0035 32.9 6.3 93 157-250 111-212 (454)
190 PRK07418 acetolactate synthase 24.0 3.1E+02 0.0067 31.9 8.9 48 175-224 85-133 (616)
191 PF01671 ASFV_360: African swi 23.7 2.7E+02 0.0059 27.5 6.8 122 504-649 91-214 (215)
192 PRK05395 3-dehydroquinate dehy 23.5 1.4E+02 0.003 27.8 4.6 45 160-206 53-97 (146)
193 cd07018 S49_SppA_67K_type Sign 23.3 1.2E+02 0.0026 30.2 4.7 42 326-367 45-86 (222)
194 cd06277 PBP1_LacI_like_1 Ligan 22.7 2.8E+02 0.0061 27.6 7.4 37 173-215 57-93 (268)
195 TIGR01088 aroQ 3-dehydroquinat 22.6 1.5E+02 0.0032 27.4 4.6 45 160-206 51-95 (141)
196 cd06312 PBP1_ABC_sugar_binding 22.6 1.9E+02 0.0042 29.0 6.2 44 319-369 49-92 (271)
197 cd01575 PBP1_GntR Ligand-bindi 22.6 3E+02 0.0066 27.1 7.6 49 156-211 39-87 (268)
198 PRK10355 xylF D-xylose transpo 22.5 2.1E+02 0.0045 30.3 6.6 44 319-369 73-116 (330)
199 cd07035 TPP_PYR_POX_like Pyrim 22.5 5.4E+02 0.012 23.4 8.7 42 176-219 60-102 (155)
200 PRK05678 succinyl-CoA syntheta 22.3 1.8E+02 0.004 30.4 5.9 55 304-363 66-120 (291)
201 COG0160 GabT 4-aminobutyrate a 22.3 5.4E+02 0.012 28.7 9.8 50 328-377 223-275 (447)
202 PLN00221 tubulin alpha chain; 22.3 2.1E+02 0.0045 32.0 6.7 93 158-250 112-211 (450)
203 TIGR00706 SppA_dom signal pept 22.1 1.7E+02 0.0038 28.7 5.5 40 326-366 29-68 (207)
204 cd02186 alpha_tubulin The tubu 22.1 1.8E+02 0.004 32.2 6.2 93 157-250 110-210 (434)
205 cd07019 S49_SppA_1 Signal pept 22.1 1.4E+02 0.0031 29.4 4.9 42 326-367 37-78 (211)
206 cd06317 PBP1_ABC_sugar_binding 22.1 7.2E+02 0.016 24.5 10.4 53 156-213 40-92 (275)
207 PLN02493 probable peroxisomal 21.5 2.8E+02 0.006 30.1 7.2 52 315-366 233-286 (367)
208 cd05562 Peptidases_S53_like Pe 21.4 2.1E+02 0.0046 29.5 6.2 48 319-367 82-131 (275)
209 cd06283 PBP1_RegR_EndR_KdgR_li 21.4 6.6E+02 0.014 24.6 9.9 37 173-214 54-90 (267)
210 cd06309 PBP1_YtfQ_like Peripla 21.4 1.7E+02 0.0037 29.4 5.5 44 319-369 47-90 (273)
211 cd06324 PBP1_ABC_sugar_binding 21.3 3E+02 0.0064 28.4 7.4 44 318-369 47-92 (305)
212 COG1908 FrhD Coenzyme F420-red 21.0 2E+02 0.0043 25.8 4.8 38 302-339 26-65 (132)
213 TIGR02634 xylF D-xylose ABC tr 20.9 2.3E+02 0.0049 29.3 6.5 44 319-369 46-89 (302)
214 cd01536 PBP1_ABC_sugar_binding 20.9 3.6E+02 0.0078 26.5 7.8 53 157-214 40-92 (267)
215 cd00466 DHQase_II Dehydroquina 20.8 1.8E+02 0.0039 26.9 4.7 45 160-206 51-95 (140)
216 PRK10949 protease 4; Provision 20.7 1.4E+02 0.0029 34.9 4.9 49 318-366 354-403 (618)
217 PF00532 Peripla_BP_1: Peripla 20.6 1.5E+02 0.0032 30.5 4.9 46 318-372 47-92 (279)
218 cd01538 PBP1_ABC_xylose_bindin 20.6 2.2E+02 0.0047 29.1 6.1 44 318-368 46-89 (288)
219 KOG1709|consensus 20.5 75 0.0016 31.6 2.4 40 550-589 1-40 (271)
220 cd06305 PBP1_methylthioribose_ 20.3 2.1E+02 0.0046 28.5 5.9 45 318-369 46-90 (273)
221 COG0001 HemL Glutamate-1-semia 20.3 9.4E+02 0.02 26.7 10.9 181 163-387 73-267 (432)
No 1
>PRK09461 ansA cytoplasmic asparaginase I; Provisional
Probab=100.00 E-value=2.1e-76 Score=622.57 Aligned_cols=332 Identities=47% Similarity=0.766 Sum_probs=291.7
Q ss_pred CCeEEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDS 153 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~dS 153 (659)
+|||+||+|||||||+.++ +++.|....+++++..+|.+.+.. ...+++.++.+++||
T Consensus 3 ~~~i~vl~TGGTIa~~~~~-~g~~~~~~~~~~~l~~~p~l~~~~---------------------~~~~~~~~~~~~idS 60 (335)
T PRK09461 3 KKSIYVAYTGGTIGMQRSD-QGYIPVSGHLQRQLALMPEFHRPE---------------------MPDFTIHEYTPLIDS 60 (335)
T ss_pred CCEEEEEeCCccccCCcCC-CCccCCCccHHHHHHhCccccccC---------------------cccEEEEEccCCCCc
Confidence 5899999999999998655 456775555688888877654210 123566788877999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHc
Q psy9757 154 SNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233 (659)
Q Consensus 154 ~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~ 233 (659)
++|||+||.+|++.|++.+++||||||||||||||||||||+|++.+++|||||||||||++++++||+.||.+|+++|+
T Consensus 61 s~mt~~~w~~la~~I~~~~~~~dG~VVtHGTDTmeeTA~~L~~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~A~ 140 (335)
T PRK09461 61 SDMTPEDWQHIADDIKANYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQTNLLNALYVAA 140 (335)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCeEEEeeccchHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCchHHHHHHHHHHHHc
Confidence 99999999999999999888899999999999999999999999988899999999999999999999999999999999
Q ss_pred CCCCCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcEEEEEeCC
Q psy9757 234 NYDIPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYP 313 (659)
Q Consensus 234 ~~~~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~p 313 (659)
++..+||+|||||+||+|++++|+|+.++|||.|||+||||+++..+.+.+... ++.+...|.+.....++|+++++||
T Consensus 141 ~~~~~GV~V~f~~~i~~a~~v~K~~t~~~daF~s~~~g~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~V~ii~~~p 219 (335)
T PRK09461 141 NYPINEVTLFFNNKLFRGNRTTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPP-APHGEGELIVHPITPQPIGVVTIYP 219 (335)
T ss_pred CCCCCeEEEEECCEeeccCceEEcCCCCCccccCCCCCcceEccceEEEecccc-CCCCCCceeecCCCCCcEEEEEecC
Confidence 877789999999999999999999999999999999999998865444433322 2223345555444457899999999
Q ss_pred CCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-CchhhhhhhhcccccccC
Q psy9757 314 HISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGY 392 (659)
Q Consensus 314 g~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~~~G~i~~~ 392 (659)
|+++++|+++++.|++||||++||+||+|. .+++.++|+++.++|+|||++|||.+|.|. ..|+++..|.+.|+++++
T Consensus 220 G~~~~~l~~~~~~~~~GiVl~~~G~Gn~p~-~~~~~~~l~~~~~~Gi~VV~~Sr~~~G~v~~~~Y~~g~~l~~~G~i~~g 298 (335)
T PRK09461 220 GISAEVVRNFLRQPVKALILRSYGVGNAPQ-NPALLQELKEASERGIVVVNLTQCMSGKVNMGGYATGNALAHAGVISGA 298 (335)
T ss_pred CCCHHHHHHHHhCCCCEEEEccCCCCCCCC-CHHHHHHHHHHHHCCCEEEEeCCCCCCcCCccchhhhHHHHhCCEEECC
Confidence 999999999999999999999999999995 458999999999999999999999999998 799999999999999999
Q ss_pred CCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCc
Q psy9757 393 DMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430 (659)
Q Consensus 393 dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt 430 (659)
||++++|++||+++|+++ .+.++++++|.+++++|++
T Consensus 299 ~lt~ekAr~kL~~~L~~~-~~~~~i~~~f~~~~~ge~~ 335 (335)
T PRK09461 299 DMTVEAALTKLHYLLSQE-LSTEEIRQAMQQNLRGELT 335 (335)
T ss_pred CCCHHHHHHHHHHHHhCC-CCHHHHHHHHhhccCCCCC
Confidence 999999999999999984 7999999999999999864
No 2
>TIGR00519 asnASE_I L-asparaginases, type I. Two related families of asparaginase are designated type I and type II according to the terminology in E. coli, which has both: L-asparaginase I is a low-affinity enzyme found in the cytoplasm, while L-asparaginase II is a high-affinity secreted enzyme synthesized with a cleavable signal sequence. This model describes L-asparaginases related to type I of E. coli. Archaeal putative asparaginases are of this type but contain an extra ~ 80 residues in a conserved N-terminal region. These archaeal homologs are included in this model.
Probab=100.00 E-value=1.9e-76 Score=623.10 Aligned_cols=326 Identities=36% Similarity=0.559 Sum_probs=288.0
Q ss_pred CCeEEEEecCCccccccCC-CCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNE-QGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLD 152 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~-~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d 152 (659)
||||+||+|||||+|+.++ .+++.|. ..+.++++.+|.+.+.. . .++ +...++|
T Consensus 1 m~~I~vi~TGGTIa~~~~~~~~gl~p~-~~~~~ll~~~p~l~~~~---------------------~--~~~-~~~~~id 55 (336)
T TIGR00519 1 LKDISIISTGGTIASKVDYRTGAVHPV-FTADELLSAVPELLDIA---------------------N--IDG-EALMNIL 55 (336)
T ss_pred CCEEEEEECCCcccccccCCCCcccCC-CCHHHHHHhCccccccc---------------------c--ceE-EEecCCC
Confidence 6899999999999998654 3678884 56788888887665310 0 112 3444599
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHH
Q psy9757 153 SSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILA 232 (659)
Q Consensus 153 S~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a 232 (659)
|++|||+||.+|++.|++.+++||||||||||||||||||||+|++.+ +|||||||||||.+.+++||+.||.+||.+|
T Consensus 56 Ss~~tp~~w~~la~~I~~~~~~~dG~VVtHGTDTme~TA~~Ls~~l~~-~kPVVlTGsmrp~~~~~sDg~~NL~~Al~~A 134 (336)
T TIGR00519 56 SENMKPEYWVEIAEAVKKEYDDYDGFVITHGTDTMAYTAAALSFMLET-PKPVVFTGAQRSSDRPSSDAALNLLCAVRAA 134 (336)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCeEEEccCCchHHHHHHHHHHHcCC-CCCEEEECCCCCCCCcCcchHHHHHHHHHHH
Confidence 999999999999999999998999999999999999999999999977 9999999999999999999999999999999
Q ss_pred cCCC------CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCCCCc
Q psy9757 233 GNYD------IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQLNLN 305 (659)
Q Consensus 233 ~~~~------~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (659)
+++. .+||+||||++|++|+|++|.|+.++|||.|||+||||+++.+ +.+... ..+++....|.+...++++
T Consensus 135 ~~~~~~~~i~~~gV~v~f~~~i~~a~~v~K~~t~~~daF~S~~~~~lg~v~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~ 213 (336)
T TIGR00519 135 TEYIAEVTVCMHGVTLDFNCRLHRGVKVRKAHTSRRDAFASINAPPLAEINPDGIEYLNE-VYRPRGEDELEVHDRLEEK 213 (336)
T ss_pred cCccccccccCceeEEEccCeEeecCceEEcCCCCCcccCCCCCCeeEEEECCEEEEecc-ccCCCCCCceeccccCCCC
Confidence 9876 5699999999999999999999999999999999999999864 443332 2223233456666666789
Q ss_pred EEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cchhhhhhhh
Q psy9757 306 VGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILS 384 (659)
Q Consensus 306 V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~ 384 (659)
|.++++|||+++++|+++++.+++||||++||+||+|. ++.++|++|.++|++||++|||..|.|. ..|+++..|.
T Consensus 214 V~il~~~pG~~~~~l~~~~~~~~~GiVl~~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sq~~~G~v~~~~Y~~g~~l~ 290 (336)
T TIGR00519 214 VALIKIYPGISPDIIRNYLSKGYKGIVIEGTGLGHAPQ---NKLQELQEASDRGVVVVMTTQCLNGRVNMNVYSTGRRLL 290 (336)
T ss_pred EEEEEEcCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEeCCCCCCccCcccccchhhHH
Confidence 99999999999999999999999999999999999998 6799999999999999999999999998 6899999999
Q ss_pred cccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCc
Q psy9757 385 GIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELS 430 (659)
Q Consensus 385 ~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt 430 (659)
+.|+|+++||++|+|++||+++++++ .+.++++++|.++++||++
T Consensus 291 ~~G~i~~g~lt~e~A~~kL~~~L~~~-~~~~~i~~~f~~~l~ge~~ 335 (336)
T TIGR00519 291 QAGVIGGEDMLPEVALVKLMWLLGQY-SDPEEAKKMMSKNIAGEIE 335 (336)
T ss_pred hCCEEECCCCCHHHHHHHHHHHHcCC-CCHHHHHHHHhccccCccC
Confidence 99999999999999999999999994 7899999999999999975
No 3
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=100.00 E-value=5.2e-76 Score=627.63 Aligned_cols=332 Identities=33% Similarity=0.463 Sum_probs=291.2
Q ss_pred cccCCCCeEEEEecCCccccccC-CCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEe
Q psy9757 69 SEDRLESKVLVLYTGGTIGMEDN-EQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEY 147 (659)
Q Consensus 69 ~~~~~~~~i~ii~TGGTI~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (659)
.....+|||+||+|||||||+.+ ..|++.|. ...+++++.+|++.+ ...+++.++
T Consensus 57 ~~~~~~p~I~ii~TGGTIa~~~~~~~g~~~p~-~~~~~ll~~vp~l~~-----------------------~a~i~~~~~ 112 (404)
T TIGR02153 57 EKKPGLPKVSIISTGGTIASRVDYETGAVYPA-FTAEELARAVPELLE-----------------------IANIKARAV 112 (404)
T ss_pred ccCCCCCEEEEEeCCchhcccccccCCcccCC-CCHHHHHHhChhhcc-----------------------cceEEEEec
Confidence 34467899999999999999865 34556663 456788888876642 112455666
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhcC-cCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHH
Q psy9757 148 TPLLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFI 226 (659)
Q Consensus 148 ~~~~dS~~~~~~~~~~l~~~i~~~~~~-~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~ 226 (659)
.+ +||+||||+||.+|++.|++.+++ +|||||||||||||||||||+|++.+++|||||||||||++.+++||+.||.
T Consensus 113 ~n-idS~~mtp~~w~~La~~I~~~~~~~~dGvVVtHGTDTM~yTA~aLs~~l~~~~kPVVlTGAqrp~~~~~sDa~~NL~ 191 (404)
T TIGR02153 113 FN-ILSENMKPEYWIKIAEAVAKALKEGADGVVVAHGTDTMAYTAAALSFMFETLPVPVVLVGAQRSSDRPSSDAALNLI 191 (404)
T ss_pred CC-CCchhCCHHHHHHHHHHHHHHhhcCCCcEEEecCChhHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCCchHHHHHH
Confidence 66 899999999999999999999877 9999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHcCCCCCeEEEEeCCe-------eeecCceEeccCCCCCCCCCCCCcccEEEeee--eEEecccccccCCCCCcc
Q psy9757 227 GALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT--IDVNMKSIFRSSTIKKFD 297 (659)
Q Consensus 227 ~a~~~a~~~~~~gv~v~~~~~-------i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~ 297 (659)
+|+.+|+++ .+||+|||||+ +|+|+|++|+|+.++|||+|||+||||+++.+ +.+... ..+++....+.
T Consensus 192 ~Av~~A~~~-~~gV~V~f~g~~~d~~~~i~~g~rv~K~~t~~~dAF~S~n~~plg~v~~~~~v~~~~~-~~~~~~~~~~~ 269 (404)
T TIGR02153 192 CAVRAATSP-IAEVTVVMHGETSDTYCLVHRGVKVRKMHTSRRDAFQSINDIPIAKIDPDEGIEKLRI-DYRRRGEKELE 269 (404)
T ss_pred HHHHHHhCC-CCcEEEEECCccCCcceEEEEcCceEECCCCCCCcccCCCCCceEEEeCCceEEEccc-ccccCCCCccc
Confidence 999999984 56999999996 99999999999999999999999999999776 333222 22222223455
Q ss_pred ccCCCCCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cc
Q psy9757 298 VQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DT 376 (659)
Q Consensus 298 ~~~~~~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~ 376 (659)
+...+.++|+++++|||+++++|+++++.|++||||||||+||+|. ++.++|+++.++|+|||++|||.+|.|. ..
T Consensus 270 ~~~~~~~~V~ll~~~pG~d~~~l~~~~~~g~~GiVleg~G~G~vp~---~~~~~l~~a~~~GipVV~tSqc~~G~V~~~~ 346 (404)
T TIGR02153 270 LDDKFEEKVALVKFYPGISPEIIEFLVDKGYKGIVIEGTGLGHVSE---DWIPSIKRATDDGVPVVMTSQCLYGRVNLNV 346 (404)
T ss_pred cccCCCCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEeCCCCCCccCccc
Confidence 5556778999999999999999999999999999999999999998 7999999999999999999999999997 78
Q ss_pred hhhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCcc
Q psy9757 377 YEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431 (659)
Q Consensus 377 y~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~ 431 (659)
|++|..|.+.|+|+++||++++|++||||+|++ ..+.++++++|.++++||++.
T Consensus 347 Y~~g~~l~~~GvI~~gdmtpe~A~vkLm~~L~~-~~~~~ei~~~f~~~l~GEi~~ 400 (404)
T TIGR02153 347 YSTGRELLKAGVIPCEDMLPEVAYVKLMWVLGQ-TDDLEEVRKMMRTNIAGEINE 400 (404)
T ss_pred cchhhhHhhCCEEECCCCCHHHHHHHHHHHHcC-CCCHHHHHHHHhcccCccccc
Confidence 999999999999999999999999999999998 478999999999999999874
No 4
>PRK04183 glutamyl-tRNA(Gln) amidotransferase subunit D; Validated
Probab=100.00 E-value=1.6e-75 Score=625.68 Aligned_cols=329 Identities=34% Similarity=0.512 Sum_probs=290.1
Q ss_pred cCCCCeEEEEecCCccccccC-CCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecC
Q psy9757 71 DRLESKVLVLYTGGTIGMEDN-EQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTP 149 (659)
Q Consensus 71 ~~~~~~i~ii~TGGTI~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (659)
...+|||+||+|||||||+.+ ..|++.|. ...+++++.+|++.+ ...+++.++.+
T Consensus 72 ~~~~~~I~ii~TGGTIa~~~~~~~G~~~p~-~~~~~ll~~vp~l~~-----------------------~a~i~~~~~~~ 127 (419)
T PRK04183 72 DPGLPNVSILSTGGTIASKVDYRTGAVTPA-FTAEDLLRAVPELLD-----------------------IANIRGRVLFN 127 (419)
T ss_pred CCCCCEEEEEeCCchhccccccCCCcccCC-CCHHHHHHhChhhcc-----------------------cceEEEEEecc
Confidence 567899999999999999865 44556663 446888888876542 11345566766
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhcC-cCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH
Q psy9757 150 LLDSSNMCQVHWIKIANDIKEYYES-YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA 228 (659)
Q Consensus 150 ~~dS~~~~~~~~~~l~~~i~~~~~~-~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a 228 (659)
+||+||||+||.+|++.|++.+++ ||||||||||||||||||||+|++ +++|||||||||||++.+++||+.||.+|
T Consensus 128 -idS~~mtp~~W~~La~~I~~~~~~~~dGvVVtHGTDTM~yTA~aLs~~l-~~~kPVVlTGAqrp~~~~~sDa~~NL~~A 205 (419)
T PRK04183 128 -ILSENMTPEYWVEIAEAVYEEIKNGADGVVVAHGTDTMHYTAAALSFML-KTPVPIVFVGAQRSSDRPSSDAAMNLICA 205 (419)
T ss_pred -CCchhCCHHHHHHHHHHHHHHhhccCCeEEEecCCchHHHHHHHHHHhc-CCCCCEEEeCCCCCCCCCCchHHHHHHHH
Confidence 899999999999999999999876 999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHcCCCCCeEEEEeCCe-------eeecCceEeccCCCCCCCCCCCCcccEEEeee---eEEecccccccCCCCCccc
Q psy9757 229 LILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT---IDVNMKSIFRSSTIKKFDV 298 (659)
Q Consensus 229 ~~~a~~~~~~gv~v~~~~~-------i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~---~~~~~~~~~~~~~~~~~~~ 298 (659)
+.+|+++ .+||+|||||+ +|+|+|++|+|+.++|||+|||+||||++..+ +.+.... .+++....+.+
T Consensus 206 v~~A~~~-~~gV~Vvf~g~~~d~~~~i~~g~rv~K~~t~~~dAF~S~n~~plg~v~~~~~~v~~~~~~-~~~~~~~~~~~ 283 (419)
T PRK04183 206 VLAATSD-IAEVVVVMHGTTSDDYCALHRGTRVRKMHTSRRDAFQSINDKPLAKVDYKEGKIEFLRKD-YRKRGEKELEL 283 (419)
T ss_pred HHHHhCC-CCcEEEEECCccccccceEEecCcEEECCCCCcccccCCCCCceEEEecCcceEEEecCc-cccCCCCcccc
Confidence 9999974 56999999996 99999999999999999999999999999763 4433322 22222244555
Q ss_pred cCCCCCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cch
Q psy9757 299 QSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTY 377 (659)
Q Consensus 299 ~~~~~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y 377 (659)
...++++|+++++|||+++++|+++++.|++||||||||+||+|. +++++|++|.++|+|||++|||.+|.|. ..|
T Consensus 284 ~~~~~~~V~ll~~~PG~~~~~l~~~~~~g~~GiVleg~G~Gnvp~---~~~~~l~~a~~~Gi~VV~tSqc~~G~V~~~~Y 360 (419)
T PRK04183 284 NDKLEEKVALIKFYPGMDPEILDFYVDKGYKGIVIEGTGLGHVST---DLIPSIKRATDDGIPVVMTSQCLYGRVNMNVY 360 (419)
T ss_pred cCCCCCcEEEEEEcCCCCHHHHHHHHhCCCCEEEEEeECCCCCCH---HHHHHHHHHHHCCCEEEEeCCCCCCccCcccc
Confidence 556778999999999999999999999999999999999999998 7999999999999999999999999997 789
Q ss_pred hhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCcc
Q psy9757 378 EAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431 (659)
Q Consensus 378 ~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~ 431 (659)
++|..|.+.|+|+++||++++|++||||+|++ ..+.++++++|.++++||++.
T Consensus 361 ~~g~~l~~~GvI~~gdmtpe~A~vKLm~~L~~-~~~~~ei~~~f~~~l~gEi~~ 413 (419)
T PRK04183 361 STGRDLLKAGVIPGEDMLPEVAYVKLMWVLGN-TYDLEEVRELMLTNLAGEINE 413 (419)
T ss_pred cchhhHhhCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHhhccCccccc
Confidence 99999999999999999999999999999998 479999999999999999874
No 5
>cd00411 Asparaginase Asparaginase (amidohydrolase): Asparaginases are tetrameric enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases, one highly specific for asparagine and localised to the periplasm, and a second (asparaginase- glutaminase) present in the cytosol that hydrolyzises both asparagine and glutamine with similar specificities.
Probab=100.00 E-value=5.5e-73 Score=594.96 Aligned_cols=318 Identities=39% Similarity=0.627 Sum_probs=273.8
Q ss_pred CeEEEEecCCccccccCC--CCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCC
Q psy9757 75 SKVLVLYTGGTIGMEDNE--QGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLD 152 (659)
Q Consensus 75 ~~i~ii~TGGTI~~~~~~--~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d 152 (659)
|||+||+|||||+|+.++ ..++.+......+++..+|++.+. ..+.+ +...++|
T Consensus 1 ~~I~vi~TGGTIa~~~~~~~~~~~~~~~~~~~~ll~~~p~l~~~-----------------------~~~~~-~~~~~id 56 (323)
T cd00411 1 KNILILYTGGTIAMVGGSSASSGYGAGSLPADALLAAVPEIKNI-----------------------ANIKG-EQLPNID 56 (323)
T ss_pred CEEEEEECCchhhcccCCCccCCccCCCCCHHHHHHhCcccccc-----------------------cEEEE-EEecCCC
Confidence 689999999999998653 233334355677888777655421 11222 3444599
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHH
Q psy9757 153 SSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILA 232 (659)
Q Consensus 153 S~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a 232 (659)
|++|||+||.+|++.|++.+++||||||||||||||||||||+|++.+ +|||||||||||.+.+++||+.||.+|+.+|
T Consensus 57 Ss~~t~~~w~~l~~~I~~~~~~~dGiVVtHGTDTmeeTA~~L~~~l~~-~kPVVlTGA~rp~~~~~sDg~~NL~~Al~~A 135 (323)
T cd00411 57 SSDMTDEDWLKIAKDINELYDSYDGFVITHGTDTMEETAYFLSLTLEN-DKPVVLTGSMRPSTELSADGPLNLYNAVYVA 135 (323)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCcEEEEcCcccHHHHHHHHHHHhcC-CCCEEEECCCCCCCCcCcchHHHHHHHHHHH
Confidence 999999999999999999998899999999999999999999999876 9999999999999999999999999999999
Q ss_pred cCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEeccccccc-CCCCCccccCCCCCcEEEE
Q psy9757 233 GNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRS-STIKKFDVQSQLNLNVGIL 309 (659)
Q Consensus 233 ~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~il 309 (659)
+++. .+||+|||||+||+|++++|+|+.++|||.||++||||++..+..+.+..+.++ ....+|.+.....++|+++
T Consensus 136 ~~~~~~~~gV~V~f~~~i~~a~~v~K~~t~~~daF~s~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il 215 (323)
T cd00411 136 ANYDSRGRGVLVVFNDRIFRGRRVTKTHALSLDAFVSPNYGPLGYIVEDKVYYYRSVFKAHTINSEFDVKLNSLPKVGIL 215 (323)
T ss_pred cCcccCCCeEEEEECCEEeccCceEEccCCCCCCCCCCCCCeeEEEECCEEEEccCCcCCCCCCccccccCCCCCCEEEE
Confidence 9876 579999999999999999999999999999999999999987765544433222 1223444334456899999
Q ss_pred EeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhhccccc
Q psy9757 310 RIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILSGIGVI 389 (659)
Q Consensus 310 ~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~~~G~i 389 (659)
++|||+++++|+++++.|++||||++||+||+|. ++.++|+++.++|++||++|||..|.+...|+.+.+|.+.|+|
T Consensus 216 ~~~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn~p~---~~~~~l~~a~~~gi~VV~~Sq~~~G~v~~~y~~g~~l~~~G~i 292 (323)
T cd00411 216 YLYPGISAEAVRAFLRAGYKGIVLAGYGAGNVPT---DLIDELEEAAERGVVVVNSTQCEEGAVTRDYEVGGALAKYGII 292 (323)
T ss_pred EECCCCCHHHHHHHHhCCCCEEEEEeECCCCCCH---HHHHHHHHHHHCCCEEEEecCCCCCcccCCcccccchhhCCEE
Confidence 9999999999999999999999999999999998 8999999999999999999999999998789988899999999
Q ss_pred ccCCCCHHHHHHHHHHhhhcccchhhhhhhhh
Q psy9757 390 NGYDMTPEAALTKLSYVLSKSELTLQQKKDIM 421 (659)
Q Consensus 390 ~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~ 421 (659)
+++||++|+|++||+++|+++ .+.++++++|
T Consensus 293 ~~~~lt~e~A~~kL~~~L~~~-~~~~~i~~~~ 323 (323)
T cd00411 293 ASGDLNPEKARILLMLALTQT-KDPKVIKKMF 323 (323)
T ss_pred ECCCCCHHHHHHHHHHHHcCC-CCHHHHHHhC
Confidence 999999999999999999984 6788877664
No 6
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=100.00 E-value=1.2e-71 Score=585.40 Aligned_cols=313 Identities=35% Similarity=0.517 Sum_probs=263.2
Q ss_pred EEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCCCCCC
Q psy9757 77 VLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSSNM 156 (659)
Q Consensus 77 i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~dS~~~ 156 (659)
|+||+|||||||+.++.++..+......++++.+|.+. .+.. ..+ .+...++||++|
T Consensus 1 I~vi~TGGTIa~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~----~~~-~~~~~~idSs~~ 57 (323)
T smart00870 1 ILVLYTGGTIAMKADPSTGAVGPTAGAEELLALLPALP------------------ELAD----DIE-VEQVFNIDSSNM 57 (323)
T ss_pred CEEEEcCChhcceeCCCCCccCCCCchhhHHHhhhhhh------------------cccC----ceE-EEEecCCCcccC
Confidence 68999999999987665444433334445555444332 1110 122 344455999999
Q ss_pred CHHHHHHHHHHHHHHh--cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcC
Q psy9757 157 CQVHWIKIANDIKEYY--ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGN 234 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~--~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~ 234 (659)
||+||.+|++.|++.+ ++||||||||||||||||||||+|++.+++|||||||||||++.+++||+.||.+|+.+|++
T Consensus 58 t~~~w~~la~~i~~~~~~~~~dG~VVtHGTDTmeeTA~~Ls~~l~~l~kPVVlTGa~rp~~~~~sDg~~NL~~Av~~A~~ 137 (323)
T smart00870 58 TPADWLKLAKRINEALADDGYDGVVVTHGTDTLEETAYFLSLTLDSLDKPVVLTGAMRPATALSSDGPANLLDAVRVAAS 137 (323)
T ss_pred CHHHHHHHHHHHHHHhccCCCCEEEEecCCccHHHHHHHHHHHhhcCCCCEEEECCCCCCCCCCchhHHHHHHHHHHHcC
Confidence 9999999999999854 46999999999999999999999999888999999999999999999999999999999998
Q ss_pred CC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCC-C--CccccCCCCCcEEEE
Q psy9757 235 YD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTI-K--KFDVQSQLNLNVGIL 309 (659)
Q Consensus 235 ~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~V~il 309 (659)
+. .+||+|||||+||+|++++|+|+.++|||.||++||||++..+..+.+..+.+++.. . .+.......++|.|+
T Consensus 138 ~~a~~~GV~V~f~~~i~~a~~v~K~~t~~~daF~s~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il 217 (323)
T smart00870 138 PEARGRGVLVVFNDEIHRARRVTKTHTSRVDAFQSPNFGPLGEVDEGGVVYYTRPTRRHTRRSPKLLDLKDALLPKVAIV 217 (323)
T ss_pred cccCCCEEEEEECCEeeeeCceEEcCCCCcccccCCCCCeeEEEECCEEEEecccccccccccccccccccCCCCcEEEE
Confidence 87 579999999999999999999999999999999999999987766555443333221 1 122334556899999
Q ss_pred EeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cchhhhhhhhcccc
Q psy9757 310 RIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGV 388 (659)
Q Consensus 310 ~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~~~G~ 388 (659)
++|||+++++|+++++.+++||||++||+||+|+ ++.++|+++.++|+|||++|||.+|.|. ..|+.+..|.+.|+
T Consensus 218 ~~~pG~~~~~l~~~~~~~~~GlVl~~~G~Gn~p~---~~~~~l~~a~~~gipVV~~sq~~~G~v~~~~y~~g~~l~~~G~ 294 (323)
T smart00870 218 KAYPGMDAELLDALLDSGAKGLVLEGTGAGNVPP---DLLEALKEALERGIPVVRTSRCLNGRVDPGYYATGRDLAKAGV 294 (323)
T ss_pred EeCCCCCHHHHHHHHhCCCCEEEEEeeCCCCCCH---HHHHHHHHHHHCCCEEEEeccCCCceecccccccccchhhCCE
Confidence 9999999999999999999999999999999998 7999999999999999999999999998 57788889999999
Q ss_pred cccCCCCHHHHHHHHHHhhhcccchhhh
Q psy9757 389 INGYDMTPEAALTKLSYVLSKSELTLQQ 416 (659)
Q Consensus 389 i~~~dmt~e~a~~kL~~~l~k~~~~~~~ 416 (659)
|+++||++++|++||+++|+++ .+.++
T Consensus 295 i~~g~lt~ekA~~kL~~~L~~~-~~~~~ 321 (323)
T smart00870 295 ISAGDLTPEKARIKLMLALGKG-LDPEE 321 (323)
T ss_pred EECCCCCHHHHHHHHHHHHcCC-CChHH
Confidence 9999999999999999999984 45444
No 7
>TIGR00520 asnASE_II L-asparaginases, type II. Two related families of asparaginase (L-asparagine amidohydrolase, EC 3.5.1.1) are designated type I and type II according to the terminology in E. coli, which has both: L-asparaginase I is a low-affinity enzyme found in the cytoplasm, while L-asparaginase II is a high-affinity periplasmic enzyme synthesized with a cleavable signal sequence. This model describes L-asparaginases related to type II of E. coli. Both the cytoplasmic and the cell wall asparaginases of Saccharomyces cerevisiae belong to this set. Members of this set from Acinetobacter glutaminasificans and Pseudomonas fluorescens are described as having both glutaminase and asparaginase activitities. All members are homotetrameric.
Probab=100.00 E-value=7.7e-71 Score=579.75 Aligned_cols=324 Identities=24% Similarity=0.312 Sum_probs=274.1
Q ss_pred ccCCcccCCCCeEEEEecCCccccccCC---CCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeE
Q psy9757 65 TLNSSEDRLESKVLVLYTGGTIGMEDNE---QGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVL 141 (659)
Q Consensus 65 ~~~~~~~~~~~~i~ii~TGGTI~~~~~~---~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (659)
++.+.....+|||+||+|||||+|+.++ .+++.|.....+++|+.+|++.+. ..
T Consensus 15 ~~~~~~~~~~~~Ilii~TGGTIa~~~~~~~~~~g~~~g~~~~~~ll~~vp~l~~~-----------------------~~ 71 (349)
T TIGR00520 15 SGSAAQARSLPNIKILATGGTIAGKGQSSASTAGYKVGELGIEDLIEAVPSLKDI-----------------------AN 71 (349)
T ss_pred cchhhhhcCCCEEEEEECCCcceeccCccccccCcccCCCCHHHHHHhCcccccc-----------------------ce
Confidence 4455566678999999999999998643 245655445568888888766421 12
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHHHHHHHhc--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCC
Q psy9757 142 YKVVEYTPLLDSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRS 219 (659)
Q Consensus 142 ~~~~~~~~~~dS~~~~~~~~~~l~~~i~~~~~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~ 219 (659)
+++.++.+ +||++|||+||.+|++.|++.++ +||||||||||||||||||||+|++. .+|||||||||||.+.+++
T Consensus 72 i~~~~~~~-idS~~mt~~dw~~la~~I~~~~~~~~~~GiVVtHGTDTme~tA~~Lsl~l~-~~kPVVlTGAmrP~~~~~s 149 (349)
T TIGR00520 72 IKGEQIVN-VGSQDMNEEVLLKLAKGINELLASDDYDGIVITHGTDTLEETAYFLDLTVK-SDKPVVIVGAMRPSTSVSA 149 (349)
T ss_pred EEEEEccC-CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEeCCcccHHHHHHHHHHHcC-CCCCEEEECCCCCCCCcCc
Confidence 45667766 89999999999999999999985 49999999999999999999999885 5999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCc
Q psy9757 220 DGVHNFIGALILAGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKF 296 (659)
Q Consensus 220 Dg~~Nl~~a~~~a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~ 296 (659)
||+.||.+||.+|+++. .+||+|||||+||+|++++|+|+.++|||.|||+||||+++.+ +.+.+.+..++....+|
T Consensus 150 Dg~~NL~~Av~~A~~~~~~~~gV~v~f~~~i~~a~~v~K~~t~~~daF~S~~~g~LG~v~~~~v~~~~~~~~~~~~~~~~ 229 (349)
T TIGR00520 150 DGPMNLYNAVSVAANPKSAGRGVLVVLNDRIASGRYVTKTNTTSLDTFKSRNQGYLGYIHNGKIDYYYPPVRKHTCDTPF 229 (349)
T ss_pred chHHHHHHHHHHHcCcccCCCcEEEEECCEEeecCceEecCCCCCCcccCCCCCceEEEECCEEEEecCccccCCCCccc
Confidence 99999999999999876 4699999999999999999999999999999999999999874 44444322222111245
Q ss_pred cccCCC--CCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC
Q psy9757 297 DVQSQL--NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS 374 (659)
Q Consensus 297 ~~~~~~--~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~ 374 (659)
.+.... .++|+|+++|||+++++|+++++.|++||||++||+||+|+ .+.++|+++.++|+|||++|||..|.|.
T Consensus 230 ~~~~~~~~~p~V~il~~~pG~~~~ll~~~~~~g~~GlVl~g~G~Gn~p~---~~~~al~~a~~~GipVV~~Sr~~~G~v~ 306 (349)
T TIGR00520 230 SVSNLDEPLPKVDIIYAYQNAPPLIVNAVLDAGAKGIVLAGVGNGSLSA---AGLKVNETAAKLGVPIVRSSRVPDGMVT 306 (349)
T ss_pred ccccccCCCCcEEEEEECCCCCHHHHHHHHhCCCCEEEEEeECCCCCCH---HHHHHHHHHHHCCCEEEEEccCCCCccC
Confidence 544322 47999999999999999999999999999999999999998 8999999999999999999999999997
Q ss_pred CchhhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 375 DTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 375 ~~y~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
..|.. .|+++++||++++|++||+++|+++ .+.++++++|..
T Consensus 307 ~~~~~------~G~i~ag~LtpekArikL~~~L~~~-~~~~ei~~~f~~ 348 (349)
T TIGR00520 307 PDAEP------DGFIASGYLNPQKARVLLQLALTKT-YDPEKIQQVFEG 348 (349)
T ss_pred CCccc------cCeEECCCCCHHHHHHHHHHHHhCC-CCHHHHHHHHhh
Confidence 33321 7999999999999999999999984 688999988864
No 8
>COG0252 AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-70 Score=573.26 Aligned_cols=328 Identities=29% Similarity=0.424 Sum_probs=274.7
Q ss_pred cCCCCeEEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCC
Q psy9757 71 DRLESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPL 150 (659)
Q Consensus 71 ~~~~~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 150 (659)
...+|||+||+|||||||+.++..+.++......+++..+|.+.. +.... ..+..++. +
T Consensus 16 ~~~l~~I~Il~TGGTIa~~~~~~t~~~~~~~~~~~i~~~~~~v~~------------------~~~~~--~i~~~~~~-n 74 (351)
T COG0252 16 NSKLPKILILATGGTIASGTDSSTGAVTPTSGALEILALLPAVPA------------------LNIAA--NIEGEQVL-N 74 (351)
T ss_pred cccCCeEEEEecCCeeeccccCCCCccccccchHHHHHHhhhccc------------------ccccc--ceeeEEec-c
Confidence 667779999999999999755554444444555555555443321 10000 12233344 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcC--cCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH
Q psy9757 151 LDSSNMCQVHWIKIANDIKEYYES--YDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA 228 (659)
Q Consensus 151 ~dS~~~~~~~~~~l~~~i~~~~~~--~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a 228 (659)
+||++|||++|.+|++.|++.+++ +|||||||||||||||||||+|++.+ +|||||||||||.+++++||+.||++|
T Consensus 75 i~S~~m~~~~w~~la~~I~~~~~~~~~dGvVItHGTDTmeeTA~~L~l~l~~-~kPVVlTGamr~s~~~~sDg~~NL~~A 153 (351)
T COG0252 75 IDSSDMTPEDWLRLAEAINEALDDGDVDGVVITHGTDTMEETAFFLSLTLNT-PKPVVLTGAMRPADAPSSDGPANLRNA 153 (351)
T ss_pred CCcccCCHHHHHHHHHHHHHHhccCCCCeEEEeCCCchHHHHHHHHHHHhcC-CCCEEEeCCCCCCCCcCCCcHHHHHHH
Confidence 999999999999999999999876 59999999999999999999999966 999999999999999999999999999
Q ss_pred HHHHcCCCC--CeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcE
Q psy9757 229 LILAGNYDI--PEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNV 306 (659)
Q Consensus 229 ~~~a~~~~~--~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 306 (659)
|.+|++++. .||+++||++||+|++++|+|+.++++|+||++||||++..+....+..+.+ .....|.+....+++|
T Consensus 154 v~vA~~~~~~~~gV~v~~~~~i~~a~~v~K~ht~~~daF~s~~~gplg~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~V 232 (351)
T COG0252 154 VSVAADPKSRGVGVLVVFNDRIHRGVRVTKTHTSRFDAFESPNLGPLGEIDRGKVSFFRDPYR-RGDSGFDVSPLTEPKV 232 (351)
T ss_pred HHHhcCcccCCcEEEEecCceeeecceeeeccccchhhhcCCCCCceEEEecCceEEeecccc-ccCcceecccCCCCcE
Confidence 999998665 4799999999999999999999999999999999999997753333322222 2234577777777999
Q ss_pred EEEEeCCCCCHHHHH-HhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cchhhhhhhh
Q psy9757 307 GILRIYPHISNHTVR-SFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILS 384 (659)
Q Consensus 307 ~il~~~pg~~~~~l~-~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~ 384 (659)
+|++.|||+++++++ ++++.|+||||||++|+||+|+ ++++.++++.++|+|||++|||.+|.|. ..|..|+.|.
T Consensus 233 ~ii~~ypG~~~~~i~~a~~~~g~~GiVie~~G~G~~~~---~~~~~i~~~~~~gi~VV~sSr~~~G~v~~~~y~~g~~l~ 309 (351)
T COG0252 233 VIIKYYPGLSSSLIDSALLSSGAKGLVLEGTGSGNVTP---ALIESIERASKRGIPVVYSSRCLSGRVNYGVYGTGNDLA 309 (351)
T ss_pred EEEEeCCCCCHHHHHHHHHhcCCCEEEEEEECCCCCCh---HHHHHHHHHHHCCCeEEEEeccCCCcccccccccccchh
Confidence 999999999999998 5678999999999999999998 8999999999999999999999999997 7888999999
Q ss_pred cccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccc
Q psy9757 385 GIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNI 425 (659)
Q Consensus 385 ~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l 425 (659)
+.|+|++++|+|++|++|||++|+++ .+.++.++.|..+.
T Consensus 310 ~~G~I~a~~l~pekArvkLm~aL~~~-~~~~~~~~~~~~~~ 349 (351)
T COG0252 310 PAGAIGAGDLNPEKARVLLMLALGNG-LDSEEVIQSIFENL 349 (351)
T ss_pred hCCceEcCCcCHHHHHHHHHHHHHcC-CCHHHHHHHHhhhc
Confidence 99999999999999999999999995 67766666665544
No 9
>PRK11096 ansB L-asparaginase II; Provisional
Probab=100.00 E-value=5.4e-70 Score=572.13 Aligned_cols=322 Identities=24% Similarity=0.348 Sum_probs=270.2
Q ss_pred cCCCCeEEEEecCCccccccCC--CCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEec
Q psy9757 71 DRLESKVLVLYTGGTIGMEDNE--QGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYT 148 (659)
Q Consensus 71 ~~~~~~i~ii~TGGTI~~~~~~--~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (659)
+..+|||+||+|||||+|+... ..++.+.....+++++.+|.+.+ ...+++.++.
T Consensus 19 ~~~~~~I~vi~TGGTIa~~~~~~~~~~~~~g~~~~~~ll~~vp~l~~-----------------------~~~i~~~~~~ 75 (347)
T PRK11096 19 AFALPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNAVPQLKD-----------------------IANVKGEQVV 75 (347)
T ss_pred hccCCcEEEEeCCCccccccCCccccccccCCCCHHHHHHhCccccc-----------------------cceEEEEEcc
Confidence 3668999999999999996332 23344433445788887776542 1124566766
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH
Q psy9757 149 PLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA 228 (659)
Q Consensus 149 ~~~dS~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a 228 (659)
+ +||++|||+||.+|++.|++.+++||||||||||||||||||||++++ +++|||||||||||++.+++||+.||.+|
T Consensus 76 ~-~dS~~~t~~~~~~l~~~i~~~~~~~dGiVVtHGTDTme~tA~~Ls~~~-~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 153 (347)
T PRK11096 76 N-IGSQDMNDEVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTV-KCDKPVVLVGAMRPSTAMSADGPLNLYNA 153 (347)
T ss_pred c-CCcccCCHHHHHHHHHHHHHhcCCCCEEEEeCCCchHHHHHHHHHHhc-cCCCCEEEeCCCCCCCCcCCchHHHHHHH
Confidence 6 999999999999999999998788999999999999999999999965 78999999999999999999999999999
Q ss_pred HHHHcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccC-CCCC
Q psy9757 229 LILAGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQS-QLNL 304 (659)
Q Consensus 229 ~~~a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (659)
+.+|+++. .+||+|||||++++|++++|+|+.++|||.||++||||++..+ +.+.+....++.....|++.. ...+
T Consensus 154 i~~A~~~~~~~~gV~v~f~~~i~~a~~v~K~~t~~~daF~s~~~g~lg~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (347)
T PRK11096 154 VVTAADKASANRGVLVAMNDTVLDGRDVTKTNTTDVQTFQSPNYGPLGYIHNGKVDYQRTPARKHTTDTPFDVSKLNELP 233 (347)
T ss_pred HHHHcCcccCCCeEEEEECCEEEecCceEECCCCCccccCCCCCCceEEEECCEEEEecCccccCCCccccccccccCCC
Confidence 99999876 4699999999999999999999999999999999999999754 333332221112223454332 2337
Q ss_pred cEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhh
Q psy9757 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILS 384 (659)
Q Consensus 305 ~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~ 384 (659)
+|+|+++|||+++++++++++.|++||||+|||+||+|+ ++.++|+++.++|+|||++|||.+|.+...+ +..+.
T Consensus 234 ~V~il~~~pG~~~~~l~~~l~~~~~GiVl~g~G~Gn~~~---~~~~~l~~a~~~GipVV~~Sqc~~G~v~~~~--~~~l~ 308 (347)
T PRK11096 234 KVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYK---TVFDTLATAAKNGVAVVRSSRVPTGATTQDA--EVDDA 308 (347)
T ss_pred eEEEEEeCCCCCHHHHHHHHhccCCEEEEEeECCCCCCH---HHHHHHHHHHHCCCEEEEeCCCCCCCcCccc--ccchh
Confidence 999999999999999999999999999999999999998 8999999999999999999999999997322 12467
Q ss_pred cccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 385 GIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 385 ~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
+.|+|.++||++++|++||+++|++ ..+.++++++|..
T Consensus 309 ~~G~I~~g~lt~ekArikL~l~L~~-~~~~~~i~~~f~~ 346 (347)
T PRK11096 309 KYGFVASGTLNPQKARVLLQLALTQ-TKDPQQIQQMFNQ 346 (347)
T ss_pred hCCEEECCCCCHHHHHHHHHHHHcC-CCCHHHHHHHHhh
Confidence 8999999999999999999999998 4788999988764
No 10
>PF00710 Asparaginase: Asparaginase; InterPro: IPR006034 Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma []. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma [, ] - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die. Glutaminase, a similar enzyme, catalyses the deaminination of glutamine to glutamic acid and an ammonium ion []. Both enzymes are homotetramers []: two threonine residues in the N-terminal half of the proteins are involved in the catalytic activity.; GO: 0006520 cellular amino acid metabolic process; PDB: 1HFW_C 1HG1_B 1JSL_C 1HFK_A 1JSR_C 1HFJ_C 1HG0_D 1O7J_A 1ZQ1_A 1JJA_D ....
Probab=100.00 E-value=8e-71 Score=577.28 Aligned_cols=311 Identities=35% Similarity=0.578 Sum_probs=252.0
Q ss_pred eEEEEecCCccccccCCCC-ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCCCC
Q psy9757 76 KVLVLYTGGTIGMEDNEQG-ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSS 154 (659)
Q Consensus 76 ~i~ii~TGGTI~~~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~dS~ 154 (659)
||+||+|||||+|+..+.+ .+.| ..+++++.+| +.+ .+ .+++.++. ++||+
T Consensus 1 kI~vi~TGGTI~~~~~~~~~~~~~---~~~~~l~~~~-l~~---------------~~--------~~~~~~~~-~~dS~ 52 (313)
T PF00710_consen 1 KILVIYTGGTIAMVYSPGGGGLAP---TGEELLEALP-LSN---------------IA--------DIEVEQFM-NIDSS 52 (313)
T ss_dssp EEEEEEEESGGGEEESTTTTSCEB---HHHHHHHHSG-GGG---------------TS--------EEEEEEEE-EE-GG
T ss_pred CEEEEEeCchhhceEcCCCCeecc---CHHHHHHhCc-ccc---------------CC--------eEEEcccc-ccCch
Confidence 7999999999999865554 5666 6788888876 542 11 23333344 49999
Q ss_pred CCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcC
Q psy9757 155 NMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGN 234 (659)
Q Consensus 155 ~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~ 234 (659)
+||++||.+|++.|++.+++||||||||||||||||||||++++.+++|||||||||||++.+++||+.||.+|+.+|++
T Consensus 53 ~~t~~~~~~la~~i~~~~~~~~GvVVtHGTDTme~tA~~Ls~~l~~l~kPVVlTGa~~P~~~~~sDg~~NL~~Av~~A~~ 132 (313)
T PF00710_consen 53 DMTPEDWLELARAIQAALDDYDGVVVTHGTDTMEETAFFLSLLLDNLDKPVVLTGAMRPLSAPGSDGPRNLYDAVRVAAS 132 (313)
T ss_dssp G--HHHHHHHHHHHHHHHTTCSEEEEE--STTHHHHHHHHHHHEES-SSEEEEE--SS-TTSTT-SHHHHHHHHHHHHHS
T ss_pred hcCHHHHHHHHHHHHHHHHhcCeEEEecCchHHHHHHHHHHHHhcCCCCCEEEeCCcCCCcCCCCccHHHHHHHHHHHhc
Confidence 99999999999999999988999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcEEEEEeCCC
Q psy9757 235 YDIPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPH 314 (659)
Q Consensus 235 ~~~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pg 314 (659)
+..+||+|||||+||+|++++|+|+.+++||.||++||+|+++.++.+.+.+..++....++.....+.++|.++++|||
T Consensus 133 ~~~~GV~v~f~~~i~~a~~v~K~~t~~~daF~s~~~g~lg~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pG 212 (313)
T PF00710_consen 133 PAGPGVLVVFNGRIYAARRVTKVHTNSLDAFQSPNFGPLGRVGGGVRFFRRPLRRPPPSFPFDIPPDFLPRVAILYLYPG 212 (313)
T ss_dssp GGTSSEEEEETTEEEETTTEEEEBSSSTTEEEETTS--SEEETTEEEESEEESSC-GGGSSGEETTSS-S-EEEEE--TT
T ss_pred ccCCceEEEeCCCccceEEeEecccCCcccccCCCCCceEEECCEEEEeeccccccccccccccccccCCCEEEEEECCC
Confidence 88899999999999999999999999999999999999999966677766655444323456666678899999999999
Q ss_pred CCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-CchhhhhhhhcccccccCC
Q psy9757 315 ISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVINGYD 393 (659)
Q Consensus 315 ~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~~~G~i~~~d 393 (659)
+++++|++++ .+++||||++||+||.|+ .+.++|+++.++|+|||++|||..|.+. ..|+++.+|.+.|+++++|
T Consensus 213 ~~~~~l~~~~-~~~~GlVl~~~G~Gn~~~---~~~~~l~~a~~~gipVV~~sr~~~G~v~~~~y~~~~~l~~~Gvi~~g~ 288 (313)
T PF00710_consen 213 MDAELLDAAL-AGAKGLVLEGYGAGNVPP---ALLEALARAVERGIPVVVTSRCPSGGVDYGYYGSGRDLAEAGVISGGD 288 (313)
T ss_dssp --THHHHHHH-TT-SEEEEEEBTTTBSSH---HHHHHHHHHHHTTSEEEEEESSSCS-BBTTSSCTSSHHHHCTEEE-TT
T ss_pred CCHHHHHHHh-ccCCEEEEeccCCCCCCH---HHHHHHHHHHhcCceEEEecccccCCcccccccchhhhhhCCEEECCC
Confidence 9999999999 889999999999999887 8999999999999999999999999998 8899999999999999999
Q ss_pred CCHHHHHHHHHHhhhcccchhhhhh
Q psy9757 394 MTPEAALTKLSYVLSKSELTLQQKK 418 (659)
Q Consensus 394 mt~e~a~~kL~~~l~k~~~~~~~vk 418 (659)
|++++|++||+++++++..+.+++|
T Consensus 289 lt~ekA~~kL~~~L~~~~~~~~eIr 313 (313)
T PF00710_consen 289 LTPEKARIKLMLALAKGGLSPEEIR 313 (313)
T ss_dssp --HHHHHHHHHHHCTT-S--HHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCChHHcC
Confidence 9999999999999999547888764
No 11
>KOG0503|consensus
Probab=100.00 E-value=2.2e-59 Score=471.38 Aligned_cols=361 Identities=32% Similarity=0.437 Sum_probs=300.5
Q ss_pred EecCCCccccchhhhcccCCCCCCCcchhhhhhcc-cCCcccCCCCeEEEEecCCccccccCCCCccccCCCchhhHHhh
Q psy9757 31 SIGNDNFDHRFKYLQQVDQDERPLHQDSDRRASLT-LNSSEDRLESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRE 109 (659)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~ 109 (659)
.+|++.+..++...|+ . +| .+.|+.+.+ +-...+...+++.+..+||||+.+.. .
T Consensus 3 ~~~~~l~~~~~~~~~~--~--~p---~~kr~~v~~sg~~~~n~~lp~~~~~~~~g~ia~~~~-----------------~ 58 (368)
T KOG0503|consen 3 KFNVVLLSLLVALSQS--A--AP---LEKRVAVKYSGGTIGNSSLPSIVIFGTGGTIAGKGT-----------------D 58 (368)
T ss_pred cchhhHHHHHHHHccc--C--Cc---hhhhhhhhcccccccccccCceeecCCCCeeecccc-----------------c
Confidence 3456666666663333 1 22 566666643 44446777777777777777766422 1
Q ss_pred CCCCcccccccccccCCcccccccccc-cceeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHH
Q psy9757 110 NPLLYDRHYDVCKTQDGNVLVLPRVKD-TRRVLYKVVEYTPLLDSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLS 188 (659)
Q Consensus 110 ~~~l~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~dS~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~ 188 (659)
.|...|..|.. .........+|.+.. ..++.|++.++.++.++++|+..+|..|++.|++ ++||||||||||||||
T Consensus 59 s~~~~~~~~~s-~~i~~~~~avP~v~~~~~~v~~q~~~~~s~~ln~~~l~~~~~~I~~~iqk--~~~~G~VV~HGTDTLe 135 (368)
T KOG0503|consen 59 SPTTADYAYGS-LTVIVLGGAVPAVSGSANRVYYQVLNVGSLLLNITMLYNDAKRIAETLQK--KSYDGIVVTHGTDTLE 135 (368)
T ss_pred CCccccccccc-cchhhccccCcccccccceeEEEEEecccccccHHHHHHHHHHHHHHhcc--cccCcEEEEcCcchHH
Confidence 22222222222 111222235676765 7788899999999999999999999999999998 6899999999999999
Q ss_pred HHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCC
Q psy9757 189 YTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFD 266 (659)
Q Consensus 189 ~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~ 266 (659)
||||||+++++++ ||||+||||||..+.++||+.||+.|+.+|++++ .+||+|.||++|-+|.|.+|++.+.+|||.
T Consensus 136 ~tAffls~~~~t~-KPIVitGa~~P~~~v~aDG~~Nl~~Av~iAgs~k~~~~gv~v~~n~ki~~g~~ttK~n~n~lDaf~ 214 (368)
T KOG0503|consen 136 ETAFFLSFTINTL-KPIVITGAMRPATEVSADGPMNLYRAVLIAGSDKSVGRGVLVPLNDKIPSGFRTTKTNVNSLDAFD 214 (368)
T ss_pred HHHHHHHHHHhcC-CcEEEeccccceeeeccCCchhhhceEEEeecCcccccceeeccCCcccceeEeecccccchhhcC
Confidence 9999999999776 9999999999999999999999999999999655 589999999999999999999999999999
Q ss_pred CCCCcccEEEeeeeEEecccccccCCCCCccccCC-CCCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCc
Q psy9757 267 SPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQ-LNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNR 345 (659)
Q Consensus 267 sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~ 345 (659)
||+.++||.+..+...++..+++|.....|.++.. ..|+|+|||.|||+++.+++++++.++||+||+++|+||+|...
T Consensus 215 s~~~~~Lg~i~~~~~~~~~~~~~p~~~~~F~v~~~~~~p~V~ILy~~~g~s~sli~a~~~~~~kGlVL~s~Gag~~~~~~ 294 (368)
T KOG0503|consen 215 SPNIGSLGIIRNNYSNFYYPPFRPNGIQGFDVSNNTLLPEVPILYIYQGLSPSLIQAALKLPAKGLVLASSGAGSWPTNR 294 (368)
T ss_pred CcccCcchhheecccccccCCcccCceeeeeecccccCCceeEEEecCCCCHHHHHHhhcccCceEEEEeccCCCCCCcc
Confidence 99999999999888888888889888888998776 78999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccc
Q psy9757 346 SDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNI 425 (659)
Q Consensus 346 ~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l 425 (659)
.+....|.++.++++.++. ||..|.+...|.. .|+|++++|+||+|+.+|+++++++.++.++++++|...+
T Consensus 295 ~~~~~~L~~~~~~~vv~~~--~~~~G~v~~~~~p------~~~Ips~ylsPekA~~lL~l~l~~~~~sl~~i~~vf~~~~ 366 (368)
T KOG0503|consen 295 SDVIDELPEAYARPVVYSN--RCADGFVDNDYAP------VGAIPSGYLSPEKARILLSLALGKGYTSLSEIRSVFSGSY 366 (368)
T ss_pred hhHHHHhHHHhccCceeec--cccCCcccccccc------cccccccccCHHHHHHHHHhhHhCCccchHHHHHhhcccc
Confidence 8999999998887765555 9999999877764 6899999999999999999999998888999999998776
Q ss_pred cC
Q psy9757 426 RG 427 (659)
Q Consensus 426 ~g 427 (659)
+|
T Consensus 367 ~g 368 (368)
T KOG0503|consen 367 RG 368 (368)
T ss_pred CC
Confidence 64
No 12
>KOG4412|consensus
Probab=100.00 E-value=3.3e-34 Score=262.62 Aligned_cols=195 Identities=26% Similarity=0.252 Sum_probs=180.2
Q ss_pred cChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHh-cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCC
Q psy9757 452 SGRQELNKLKKILYPALFQSAVREGDIDKIKEMQN-YGADISMTDFDRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDN 529 (659)
Q Consensus 452 ~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~-~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~ 529 (659)
+....++..++..+++|||+||..|+.+++.+|++ .+..+|.+|..|+||||.||..|+.++|+.|+.+ |+|+|..+.
T Consensus 25 s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn 104 (226)
T KOG4412|consen 25 SDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTN 104 (226)
T ss_pred cChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecC
Confidence 34456677778789999999999999999999995 5788899999999999999999999999999999 999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC
Q psy9757 530 YDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609 (659)
Q Consensus 530 ~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~ 609 (659)
.|.|+||+|+..|.+|++++|+++|+.++.+|..++||||.|+..|.++++++|+..|+.+|.+|..|+||||.|...|+
T Consensus 105 ~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 105 GGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred CCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHH
Q psy9757 610 IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIE 647 (659)
Q Consensus 610 ~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~ 647 (659)
.++..+|+++|++++..|+.| ||+..|+..-...+.+
T Consensus 185 ~d~a~lLV~~gAd~~~edke~-t~~~~a~~~l~~alk~ 221 (226)
T KOG4412|consen 185 PDVAVLLVRAGADTDREDKEG-TALRIACNELLEALKE 221 (226)
T ss_pred chHHHHHHHhccceeeccccC-chHHHHHHHHHHHHHH
Confidence 999999999999999999999 9988876543333333
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=283.32 Aligned_cols=194 Identities=16% Similarity=0.103 Sum_probs=179.2
Q ss_pred hccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Q psy9757 461 KKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI 540 (659)
Q Consensus 461 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~ 540 (659)
.+..+.|+||+|+..|+.+++++|+++|++++..+ ++||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 26 ~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 26 ADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 45567889999999999999999999999988764 7899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHHcCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFLG-DVLTNAAARGMIKRLQSYLLAGINLNQVD-SIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g~-t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d-~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
.|+.+++++|+++|++++..+..|+ ||||+|+..|+.+++++|++.+.+. .| ..|+||||+|+.+|+.+++++|++
T Consensus 104 ~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~ 181 (284)
T PHA02791 104 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLD 181 (284)
T ss_pred cCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999888885 8999999999999999999987543 23 258999999999999999999999
Q ss_pred CCCCCCCcccCCCcH-HHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 619 QHVDLTIENKNGQSA-IEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 619 ~Gad~~~~d~~G~Tp-L~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+|++++.+|..|.|| ||+|+..|+.+++++|+++|++.+.
T Consensus 182 ~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~ 222 (284)
T PHA02791 182 YMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYS 222 (284)
T ss_pred CCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcc
Confidence 999999999999987 9999999999999999999999763
No 14
>KOG4412|consensus
Probab=100.00 E-value=1.5e-33 Score=258.39 Aligned_cols=191 Identities=26% Similarity=0.336 Sum_probs=179.0
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCC-CcccCCC-CCCcHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGA-DISMTDF-DRRNILHTACSVGKLDIVKYCL-ENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga-~vn~~d~-~g~TpLh~Aa~~g~~~iv~~LL-~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
++.+.++.......++.|++... .++.++. +|+||||+||..|+.+|+.||+ +.+..+|.+|..||||||+|+..|+
T Consensus 5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~ 84 (226)
T KOG4412|consen 5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGN 84 (226)
T ss_pred chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCc
Confidence 45666777778888899988776 6777766 9999999999999999999999 5588999999999999999999999
Q ss_pred HHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 544 HDIIRLLRHC-GAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 544 ~eivklLl~~-ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
.|+|+.|+.+ |+++|..+..|.|+||+|+.+|..++.++|++.|+.++.+|..|.||||-|+.-|+++++++|+..|+.
T Consensus 85 ~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~ 164 (226)
T KOG4412|consen 85 DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAP 164 (226)
T ss_pred HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCC
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 623 LTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 623 ~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+|.+|+.|+||||.|...||.++..+|.++|++..
T Consensus 165 ~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~ 199 (226)
T KOG4412|consen 165 LNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTD 199 (226)
T ss_pred CCcccccCccHHHHHHhccCchHHHHHHHhcccee
Confidence 99999999999999988899999999999998743
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.4e-30 Score=285.97 Aligned_cols=219 Identities=25% Similarity=0.201 Sum_probs=198.5
Q ss_pred cccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy9757 434 IHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDI 513 (659)
Q Consensus 434 ~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~i 513 (659)
+..++.++++.+++ .+.+.+.. ...+.||||+|+..|+.+++++|+++|++++..+..+.||||+|+..|+.++
T Consensus 10 ~~~g~~~iv~~Ll~-----~g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~ 83 (413)
T PHA02875 10 ILFGELDIARRLLD-----IGINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKA 83 (413)
T ss_pred HHhCCHHHHHHHHH-----CCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHH
Confidence 35666777777643 34444432 3356789999999999999999999999999998999999999999999999
Q ss_pred HHHHHHCCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q psy9757 514 VKYCLENGVSVH-IRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQ 592 (659)
Q Consensus 514 v~~LL~~gadin-~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~ 592 (659)
+++|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 84 v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~ 163 (413)
T PHA02875 84 VEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI 163 (413)
T ss_pred HHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 999999998764 4577899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCC-cHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 593 VDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQ-SAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 593 ~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~-TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+|..|+||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..++.+++++|+++|++.++
T Consensus 164 ~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~ 230 (413)
T PHA02875 164 EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230 (413)
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch
Confidence 999999999999999999999999999999999998874 899999999999999999999999764
No 16
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=290.75 Aligned_cols=217 Identities=25% Similarity=0.363 Sum_probs=200.2
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHH--HcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--C
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAV--REGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG--K 510 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa--~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~ 510 (659)
..+..++++.+ ...+.+++ ..+..+.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +
T Consensus 82 ~~~~~~iv~~L-----l~~ga~i~-~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 155 (480)
T PHA03100 82 LTDVKEIVKLL-----LEYGANVN-APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKID 155 (480)
T ss_pred hhchHHHHHHH-----HHCCCCCC-CCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCCh
Confidence 44555665555 33445553 34455678999999 999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC------CcHHHHHHHcCC--HHHHHH
Q psy9757 511 LDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFL------GDVLTNAAARGM--IKRLQS 582 (659)
Q Consensus 511 ~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g------~t~L~~Aa~~g~--~~~v~~ 582 (659)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..+ .||||.|+..++ .+++++
T Consensus 156 ~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~ 235 (480)
T PHA03100 156 LKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNY 235 (480)
T ss_pred HHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888 899999999999 999999
Q ss_pred HHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 583 YLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 583 Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++.+
T Consensus 236 Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 236 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999754
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=266.27 Aligned_cols=206 Identities=15% Similarity=0.139 Sum_probs=180.2
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+.+.. .+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 39 ~~g~~eiv~~Ll~-----~ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv 110 (284)
T PHA02791 39 ADNNVRLVCTLLN-----AGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTV 110 (284)
T ss_pred HcCCHHHHHHHHH-----CcCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 5666666666633 23333322 246899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCC-CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 515 KYCLENGVSVHIRDNYDI-SPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~-TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
++|+++|++++.++..|+ ||||+|+..|+.+++++|++++++... ...|.||||+|+.+|+.+++++|+++|+++|.+
T Consensus 111 k~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d-~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~ 189 (284)
T PHA02791 111 KLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD-LAILLSCIHITIKNGHVDMMILLLDYMTSTNTN 189 (284)
T ss_pred HHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccc-cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcc
Confidence 999999999999999885 899999999999999999998765321 125899999999999999999999999999999
Q ss_pred CCCCChH-HHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 594 DSIGLTP-LHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 594 d~~g~Tp-Lh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
|..|.|| ||+|+.+|+.+++++|+++|++++.+|..| ++| ++.|++++|+++-++-
T Consensus 190 d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~~ 246 (284)
T PHA02791 190 NSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVEY 246 (284)
T ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhhh
Confidence 9999987 999999999999999999999999999854 555 8999999999987763
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=7.1e-30 Score=282.26 Aligned_cols=238 Identities=23% Similarity=0.338 Sum_probs=188.7
Q ss_pred hhhhhhhhhhcccc--------CCC-cccccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHH
Q psy9757 413 TLQQKKDIMMTNIR--------GEL-STDAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKE 483 (659)
Q Consensus 413 ~~~~vk~l~~~~l~--------gel-t~~a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~ 483 (659)
+.+.++.++..... +.. ...++..++.++++.++ +.+.+++... ..+.+|||.|+..|+.+++++
T Consensus 13 d~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll-----~~Ga~~n~~~-~~~~t~L~~A~~~~~~~iv~~ 86 (434)
T PHA02874 13 DIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFI-----KHGADINHIN-TKIPHPLLTAIKIGAHDIIKL 86 (434)
T ss_pred CHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-----HCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHH
Confidence 56677777653221 111 11233778888888774 3455555433 345678899999999999999
Q ss_pred HHhcCC-----------------------CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Q psy9757 484 MQNYGA-----------------------DISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI 540 (659)
Q Consensus 484 Ll~~ga-----------------------~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~ 540 (659)
|+++|+ +++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 87 Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~ 166 (434)
T PHA02874 87 LIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIK 166 (434)
T ss_pred HHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH
Confidence 998764 456678889999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..+. +.+++|+ .|
T Consensus 167 ~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~ 244 (434)
T PHA02874 167 HNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NN 244 (434)
T ss_pred CCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cC
Confidence 999999999999999999999999999999999999999999999998888887778888888777654 4555555 57
Q ss_pred CCCCCcccCCCcHHHHHHHcC-cHHHHHHHHhCCCCCCC
Q psy9757 621 VDLTIENKNGQSAIEVANQMQ-LNDIIELLKSSETKSKV 658 (659)
Q Consensus 621 ad~~~~d~~G~TpL~~A~~~g-~~eiv~~Ll~~ga~~~v 658 (659)
++++.+|..|.||||+|+..+ +.+++++|+++|++.+.
T Consensus 245 ~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~ 283 (434)
T PHA02874 245 ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISI 283 (434)
T ss_pred CCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCC
Confidence 777777888888888887765 67888888888877653
No 19
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=5.8e-30 Score=281.15 Aligned_cols=193 Identities=17% Similarity=0.177 Sum_probs=185.1
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.+.||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~ 82 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK 82 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 546 IIRLLRHCGAHLT-NEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 546 ivklLl~~ga~~~-~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
++++|++.|+..+ ..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++
T Consensus 83 ~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~ 162 (413)
T PHA02875 83 AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD 162 (413)
T ss_pred HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 9999999998765 446689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 625 IENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 625 ~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 163 ~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~ 196 (413)
T PHA02875 163 IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY 196 (413)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999999999998764
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1e-29 Score=284.34 Aligned_cols=193 Identities=21% Similarity=0.278 Sum_probs=154.7
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCH--------------------------------
Q psy9757 464 LYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKL-------------------------------- 511 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~-------------------------------- 511 (659)
...+|||.|+..|+.++|++|+++|+++|..|..|+||||+||..|+.
T Consensus 36 ~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~e 115 (477)
T PHA02878 36 IPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVE 115 (477)
T ss_pred cCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHH
Confidence 345678888888888888888888888888888888888888765432
Q ss_pred --------------------------------HHHHHHHHCCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy9757 512 --------------------------------DIVKYCLENGVSVHIRDNY-DISPLHEAVIADQHDIIRLLRHCGAHLT 558 (659)
Q Consensus 512 --------------------------------~iv~~LL~~gadin~~d~~-g~TpL~~Aa~~g~~eivklLl~~ga~~~ 558 (659)
+++++|+++|++++.++.. |.||||+|+..|+.+++++|+++|++++
T Consensus 116 i~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n 195 (477)
T PHA02878 116 IFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVN 195 (477)
T ss_pred HHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCC
Confidence 2666777778888888877 8888888888888888888888888888
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHc-CCHHHHHHHHHCCCCCCCccc-CCCcHHHH
Q psy9757 559 NEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLN-NNIESVRYLLSQHVDLTIENK-NGQSAIEV 636 (659)
Q Consensus 559 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~-g~~~ivk~LL~~Gad~~~~d~-~G~TpL~~ 636 (659)
..+..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++. .|.||||+
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~ 275 (477)
T PHA02878 196 IPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHS 275 (477)
T ss_pred CcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHH
Confidence 8888888888888888888888888888888888888888888888865 678888888888888888775 68888888
Q ss_pred HHHcCcHHHHHHHHhCCCCCCC
Q psy9757 637 ANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 637 A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
| .++.+++++|+++|++++.
T Consensus 276 A--~~~~~~v~~Ll~~gadin~ 295 (477)
T PHA02878 276 S--IKSERKLKLLLEYGADINS 295 (477)
T ss_pred H--ccCHHHHHHHHHCCCCCCC
Confidence 8 4677888888888887654
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.4e-29 Score=283.56 Aligned_cols=220 Identities=22% Similarity=0.281 Sum_probs=203.4
Q ss_pred ccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHH-----HHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHH-
Q psy9757 433 AIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQS-----AVREGDIDKIKEMQNYGADISMTDFDRRNILHTAC- 506 (659)
Q Consensus 433 a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~-----Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa- 506 (659)
++..++.++++.+++ .+.+.+... ..+.++||+ |+..++.+++++|+++|++++..+..|.||||+|+
T Consensus 42 A~~~~~~~ivk~Ll~-----~g~~~~~~~-~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~ 115 (480)
T PHA03100 42 AKEARNIDVVKILLD-----NGADINSST-KNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAIS 115 (480)
T ss_pred hhccCCHHHHHHHHH-----cCCCCCCcc-ccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHh
Confidence 346677777777743 344544333 345688999 99999999999999999999999999999999999
Q ss_pred -HcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9757 507 -SVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD--QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSY 583 (659)
Q Consensus 507 -~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g--~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~L 583 (659)
..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus 116 ~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~L 195 (480)
T PHA03100 116 KKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFL 195 (480)
T ss_pred cccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHcCCCcccCCCCC------ChHHHHHHHcCC--HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 584 LLAGINLNQVDSIG------LTPLHAAVLNNN--IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 584 l~~gad~n~~d~~g------~TpLh~Aa~~g~--~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
+++|++++..+..| .||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 196 l~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad 275 (480)
T PHA03100 196 LDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGAN 275 (480)
T ss_pred HHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999988 999999999999 9999999999999999999999999999999999999999999998
Q ss_pred CCC
Q psy9757 656 SKV 658 (659)
Q Consensus 656 ~~v 658 (659)
++.
T Consensus 276 ~n~ 278 (480)
T PHA03100 276 PNL 278 (480)
T ss_pred CCc
Confidence 764
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=4.5e-29 Score=275.27 Aligned_cols=202 Identities=17% Similarity=0.174 Sum_probs=182.8
Q ss_pred hcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCc-c
Q psy9757 451 LSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG--KLDIVKYCLENGVSVHI-R 527 (659)
Q Consensus 451 ~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~~~iv~~LL~~gadin~-~ 527 (659)
++.+.+++..+ ..+.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..+ ..+++++|+++|++++. .
T Consensus 59 l~~Gadvn~~d-~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~ 137 (446)
T PHA02946 59 LHRGYSPNETD-DDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSV 137 (446)
T ss_pred HHCcCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccccc
Confidence 34456666544 45778999999999999999999999999999999999999999876 48999999999999995 6
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCcccCCCCCChHHHHHH
Q psy9757 528 DNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARG--MIKRLQSYLLAGINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 528 d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g--~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa 605 (659)
|..|.|||| |+..++.+++++|+++|++++..+..|+||||+|+..+ +.+++++|++.|++++.+|.+|+||||+|+
T Consensus 138 d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa 216 (446)
T PHA02946 138 DEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVC 216 (446)
T ss_pred CCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 899999997 66779999999999999999999999999999988754 579999999999999999999999999999
Q ss_pred HcC--CHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCc-HHHHHHHHhCCCC
Q psy9757 606 LNN--NIESVRYLLSQHVDLTIENKNGQSAIEVANQMQL-NDIIELLKSSETK 655 (659)
Q Consensus 606 ~~g--~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~-~eiv~~Ll~~ga~ 655 (659)
.++ +.+++++|++ |++++.+|..|.||||+|++.++ .+++++|+++|+.
T Consensus 217 ~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~ 268 (446)
T PHA02946 217 SKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNV 268 (446)
T ss_pred HcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCC
Confidence 986 8899999995 89999999999999999999988 5899999998865
No 23
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=4e-29 Score=284.71 Aligned_cols=214 Identities=21% Similarity=0.212 Sum_probs=185.8
Q ss_pred chhhHHHHHHHHHhhcCh-hhhhhhhccCCcHHHHHHHHc--CCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCC--H
Q psy9757 437 NELDLAAAVAKTLHLSGR-QELNKLKKILYPALFQSAVRE--GDIDKIKEMQNYGADISMTDFDRRNILHTACSVGK--L 511 (659)
Q Consensus 437 ~~~~~i~~l~~~l~~~~~-~~~~~~~~~~~~t~L~~Aa~~--g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~--~ 511 (659)
...++++.+ +..+ .+++...+..+.||||+|+.. ++.+++++|+++|+++|.+|..|.||||+|++.|+ .
T Consensus 153 v~leiVk~L-----Le~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~ 227 (764)
T PHA02716 153 IDLDLIKYM-----VDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCA 227 (764)
T ss_pred CCHHHHHHH-----HHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCH
Confidence 344555555 2334 666665456678899988654 67899999999999999999999999999999995 5
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHH-------------------------------------HHcCCHHHHHHHHHcC
Q psy9757 512 DIVKYCLENGVSVHIRDNYDISPLHEA-------------------------------------VIADQHDIIRLLRHCG 554 (659)
Q Consensus 512 ~iv~~LL~~gadin~~d~~g~TpL~~A-------------------------------------a~~g~~eivklLl~~g 554 (659)
++|++|+++|+++|.+|..|+||||+| +..|+.+++++|+++|
T Consensus 228 eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G 307 (764)
T PHA02716 228 SVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG 307 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence 999999999999999999999999975 4457889999999999
Q ss_pred CCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCcccCCCCCChHHHHHHH--------------cCCHHHHHHHHH
Q psy9757 555 AHLTNEPMFLGDVLTNAAA--RGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVL--------------NNNIESVRYLLS 618 (659)
Q Consensus 555 a~~~~~~~~g~t~L~~Aa~--~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~--------------~g~~~ivk~LL~ 618 (659)
++++.++..|+||||+|+. .++.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|++
T Consensus 308 AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~ 387 (764)
T PHA02716 308 VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLIS 387 (764)
T ss_pred CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHH
Confidence 9999999999999999874 468999999999999999999999999999875 378999999999
Q ss_pred CCCCCCCcccCCCcHHHH----HHHcCcHHHHHHHHhCCCC
Q psy9757 619 QHVDLTIENKNGQSAIEV----ANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 619 ~Gad~~~~d~~G~TpL~~----A~~~g~~eiv~~Ll~~ga~ 655 (659)
+|++++.+|..|.||||. |...++.+++++|++.|+.
T Consensus 388 ~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~ 428 (764)
T PHA02716 388 LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVL 428 (764)
T ss_pred CCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcch
Confidence 999999999999999993 3456789999999998764
No 24
>PHA03095 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.1e-28 Score=275.49 Aligned_cols=191 Identities=19% Similarity=0.246 Sum_probs=118.7
Q ss_pred cHHHHHHH--HcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 466 PALFQSAV--REGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG--KLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 466 ~t~L~~Aa--~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
.||||+|+ ..++.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..|..|.||||+|+..
T Consensus 118 ~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~ 197 (471)
T PHA03095 118 RTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQS 197 (471)
T ss_pred CCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHH
Confidence 34444444 233444555555555555555555555555444433 34455555555555544455555555555443
Q ss_pred --CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q psy9757 542 --DQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMI--KRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLL 617 (659)
Q Consensus 542 --g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~--~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL 617 (659)
++.+++++|+++|++++.++..|.||||+|+..|+. .+++.|++.|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 198 ~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL 277 (471)
T PHA03095 198 FKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLI 277 (471)
T ss_pred CCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 445555666666666666666666666666666643 4666677777777777777777777777777777777777
Q ss_pred HCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 618 SQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 618 ~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
++|++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 278 ~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 278 ALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred HcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence 777777777777777777777777777777777777664
No 25
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.4e-28 Score=271.93 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=207.9
Q ss_pred HHHHHHhhhcccchhhhhhhhhhcccc-------CCC-cccccccchhhHHHHHHHHHh------------------hcC
Q psy9757 400 LTKLSYVLSKSELTLQQKKDIMMTNIR-------GEL-STDAIHNNELDLAAAVAKTLH------------------LSG 453 (659)
Q Consensus 400 ~~kL~~~l~k~~~~~~~vk~l~~~~l~-------gel-t~~a~~~~~~~~i~~l~~~l~------------------~~~ 453 (659)
.+.|.++...+ +.+-++.++..... +.. ...++..++.++++.+++.-. ...
T Consensus 36 ~tpL~~A~~~g--~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~ 113 (434)
T PHA02874 36 TTPLIDAIRSG--DAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDC 113 (434)
T ss_pred CCHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHC
Confidence 45666666663 45566666543211 111 112337778888887755310 011
Q ss_pred hhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC
Q psy9757 454 RQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDIS 533 (659)
Q Consensus 454 ~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~T 533 (659)
+.+++. .+..+.|+||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 114 g~d~n~-~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~t 192 (434)
T PHA02874 114 GIDVNI-KDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGES 192 (434)
T ss_pred cCCCCC-CCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence 112222 2445678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcC-CHHH
Q psy9757 534 PLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNN-NIES 612 (659)
Q Consensus 534 pL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g-~~~i 612 (659)
|||+|+..|+.+++++|+++|++++..+..|.||||.|+..+. +.+++|+ .|+++|.+|..|+||||+|+..+ +.++
T Consensus 193 pL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~i 270 (434)
T PHA02874 193 PLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDI 270 (434)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHH
Confidence 9999999999999999999999999999999999999999876 5666665 68999999999999999999876 8999
Q ss_pred HHHHHHCCCCCCCcccCCCcHHHHHHHcC-cHHHHHHHHhCCCCC
Q psy9757 613 VRYLLSQHVDLTIENKNGQSAIEVANQMQ-LNDIIELLKSSETKS 656 (659)
Q Consensus 613 vk~LL~~Gad~~~~d~~G~TpL~~A~~~g-~~eiv~~Ll~~ga~~ 656 (659)
+++|+++|++++.+|..|.||||+|++++ +.++++.|++++...
T Consensus 271 v~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~ 315 (434)
T PHA02874 271 IDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVLI 315 (434)
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCch
Confidence 99999999999999999999999999987 778899999887643
No 26
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=7.1e-29 Score=278.25 Aligned_cols=205 Identities=23% Similarity=0.283 Sum_probs=157.3
Q ss_pred cChhhhhhhhccCCcHHHHHHHHc-----CCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC---CHHHHHHHHHCCCC
Q psy9757 452 SGRQELNKLKKILYPALFQSAVRE-----GDIDKIKEMQNYGADISMTDFDRRNILHTACSVG---KLDIVKYCLENGVS 523 (659)
Q Consensus 452 ~~~~~~~~~~~~~~~t~L~~Aa~~-----g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g---~~~iv~~LL~~gad 523 (659)
+.+.+++..+ ..+.||||.|+.+ ++.+++++|+++|+++|.+|..|+||||+|+..+ +.+++++|+++|++
T Consensus 59 ~~Gadvn~~d-~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad 137 (489)
T PHA02798 59 NLGANVNGLD-NEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGAD 137 (489)
T ss_pred HCCCCCCCCC-CCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCC
Confidence 3455555433 3345666666543 5567777777777777777777777777777764 56777777777777
Q ss_pred CCccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHc----CCHHHHHHHHHcCC-------
Q psy9757 524 VHIRDNYDISPLHEAVIADQ---HDIIRLLRHCGAHLTNEP-MFLGDVLTNAAAR----GMIKRLQSYLLAGI------- 588 (659)
Q Consensus 524 in~~d~~g~TpL~~Aa~~g~---~eivklLl~~ga~~~~~~-~~g~t~L~~Aa~~----g~~~~v~~Ll~~ga------- 588 (659)
++.+|..|.||||+|++.++ .+++++|+++|++++..+ ..+.||||.++.. ++.+++++|+++|+
T Consensus 138 vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 138 TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 77777777777777777776 777777777777777664 3566777776553 35666666666654
Q ss_pred --------------------------------CcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHH
Q psy9757 589 --------------------------------NLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEV 636 (659)
Q Consensus 589 --------------------------------d~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~ 636 (659)
++|.+|..|+||||+|+.+|+.+++++|+++|+|++.+|..|+|||++
T Consensus 218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~ 297 (489)
T PHA02798 218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFT 297 (489)
T ss_pred cccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHH
Confidence 555677889999999999999999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHhCCCCCC
Q psy9757 637 ANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 637 A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
|++.++.++++.|++++++++
T Consensus 298 A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 298 AFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred HHHcCcHHHHHHHHccCCCHH
Confidence 999999999999999998764
No 27
>KOG0509|consensus
Probab=99.96 E-value=1.9e-29 Score=271.51 Aligned_cols=201 Identities=24% Similarity=0.321 Sum_probs=178.3
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCC-CCCCcHHHHHHHcCCHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTD-FDRRNILHTACSVGKLDI 513 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d-~~g~TpLh~Aa~~g~~~i 513 (659)
+.++.+-++.+++ .. +..++..++ .+.++||+|+.+++++++|+|+++|+++|... ..+.||||+|+++|++.+
T Consensus 53 q~G~l~~v~~lve---~~-g~~v~~~D~-~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~v 127 (600)
T KOG0509|consen 53 QYGELETVKELVE---SE-GESVNNPDR-EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISV 127 (600)
T ss_pred hcchHHHHHHHHh---hc-CcCCCCCCc-CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHH
Confidence 5555555555533 22 455555444 67789999999999999999999999999987 668899999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 514 VKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 514 v~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
|++|+++|+|++.+|.+|.+|||.|++.|+.-++-+|+.++++++.+|.+|+||||+|+.+|+...+..|++.|+.++..
T Consensus 128 v~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~ 207 (600)
T KOG0509|consen 128 VDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT 207 (600)
T ss_pred HHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999988
Q ss_pred C-CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHc
Q psy9757 594 D-SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQM 640 (659)
Q Consensus 594 d-~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~ 640 (659)
| ..|+||||+|+..|+..++++|++.|++.+.+|.+|.||+++|.+.
T Consensus 208 d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 208 DDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred ccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 7 8999999999999999999977888899999999999999999877
No 28
>PHA02946 ankyin-like protein; Provisional
Probab=99.96 E-value=3.3e-28 Score=268.44 Aligned_cols=191 Identities=19% Similarity=0.232 Sum_probs=174.2
Q ss_pred CcHHHHHHHH--cCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 465 YPALFQSAVR--EGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 465 ~~t~L~~Aa~--~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
..++||.++. ..+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+..+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~ 116 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTD 116 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 3567887653 45789999999999999999999999999999999999999999999999999999999999998876
Q ss_pred --CHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcC--CHHHHHHHH
Q psy9757 543 --QHDIIRLLRHCGAHLTN-EPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNN--NIESVRYLL 617 (659)
Q Consensus 543 --~~eivklLl~~ga~~~~-~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g--~~~ivk~LL 617 (659)
..+++++|+++|++++. .+..|.|||| |+..++.+++++|++.|++++.+|..|+||||+|+..+ +.+++++|+
T Consensus 117 ~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll 195 (446)
T PHA02946 117 DEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMM 195 (446)
T ss_pred CchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHH
Confidence 48999999999999995 6889999997 67779999999999999999999999999999998765 468999999
Q ss_pred HCCCCCCCcccCCCcHHHHHHHcC--cHHHHHHHHhCCCCCC
Q psy9757 618 SQHVDLTIENKNGQSAIEVANQMQ--LNDIIELLKSSETKSK 657 (659)
Q Consensus 618 ~~Gad~~~~d~~G~TpL~~A~~~g--~~eiv~~Ll~~ga~~~ 657 (659)
++|++++.+|..|.||||+|+..+ +.+++++|++ |++.+
T Consensus 196 ~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin 236 (446)
T PHA02946 196 KLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVN 236 (446)
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCC
Confidence 999999999999999999999986 7899999985 77765
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.3e-28 Score=274.51 Aligned_cols=208 Identities=20% Similarity=0.236 Sum_probs=163.6
Q ss_pred HHHHHhhcChhhhhhhhccCCcHHHHHHHHc---CCHHHHHHHHhcCCCc-ccCCCCCCcHHHHHHHc--CCHHHHHHHH
Q psy9757 445 VAKTLHLSGRQELNKLKKILYPALFQSAVRE---GDIDKIKEMQNYGADI-SMTDFDRRNILHTACSV--GKLDIVKYCL 518 (659)
Q Consensus 445 l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~---g~~~iv~~Ll~~ga~v-n~~d~~g~TpLh~Aa~~--g~~~iv~~LL 518 (659)
+++.| ++.+.+++..+. .+.||||.|+.. |+.+++++|+++|+++ +..+..|+||||+|+.. ++.+++++|+
T Consensus 90 iv~~L-l~~Gadin~~d~-~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll 167 (494)
T PHA02989 90 IVKLL-LKFGADINLKTF-NGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL 167 (494)
T ss_pred HHHHH-HHCCCCCCCCCC-CCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH
Confidence 34444 345556655443 355677766544 5678888888888888 67778888888887654 5778888888
Q ss_pred HCCCCCCc-cCCCCCCHHHHHHHcC----CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc------CCHHHHHHHHHcC
Q psy9757 519 ENGVSVHI-RDNYDISPLHEAVIAD----QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR------GMIKRLQSYLLAG 587 (659)
Q Consensus 519 ~~gadin~-~d~~g~TpL~~Aa~~g----~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~------g~~~~v~~Ll~~g 587 (659)
++|++++. .+..|.||||+|+..+ +.+++++|+++|++++..+..+.++||.++.. +..+++++|+. |
T Consensus 168 ~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~ 246 (494)
T PHA02989 168 SFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-Y 246 (494)
T ss_pred HcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-C
Confidence 88888877 5677888888876653 77888888888888887777778888776653 34566666544 6
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 588 INLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 588 ad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
+++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++.+++++|+++++.
T Consensus 247 advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 88888899999999999999999999999999999999999999999999999999999999998764
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.96 E-value=4.7e-28 Score=270.43 Aligned_cols=215 Identities=20% Similarity=0.241 Sum_probs=195.2
Q ss_pred hhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcC-CHHHHHHHHhcCCCcccCCCCCCcHHHHHH--HcCCHHHH
Q psy9757 438 ELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREG-DIDKIKEMQNYGADISMTDFDRRNILHTAC--SVGKLDIV 514 (659)
Q Consensus 438 ~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g-~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa--~~g~~~iv 514 (659)
..++++.+ ++.+.+++..+. .+.||||+|+..| +.+++++|+++|++++.++..|+||||+|+ ..++.+++
T Consensus 62 ~~~iv~~L-----l~~Gadin~~~~-~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv 135 (471)
T PHA03095 62 VKDIVRLL-----LEAGADVNAPER-CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVI 135 (471)
T ss_pred hHHHHHHH-----HHCCCCCCCCCC-CCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHH
Confidence 44555555 345666666554 6778999999999 599999999999999999999999999999 55689999
Q ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCc
Q psy9757 515 KYCLENGVSVHIRDNYDISPLHEAVIAD--QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR--GMIKRLQSYLLAGINL 590 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~TpL~~Aa~~g--~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~--g~~~~v~~Ll~~gad~ 590 (659)
++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++..+..|.||||+++.. ++.++++.|++.|+++
T Consensus 136 ~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~ 215 (471)
T PHA03095 136 RLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDP 215 (471)
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCC
Confidence 9999999999999999999999999876 68999999999999999999999999999975 7899999999999999
Q ss_pred ccCCCCCChHHHHHHHcCCH--HHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 591 NQVDSIGLTPLHAAVLNNNI--ESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 591 n~~d~~g~TpLh~Aa~~g~~--~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+.+|..|+||||+|+..|+. .+++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++++
T Consensus 216 ~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~ 285 (471)
T PHA03095 216 AATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINA 285 (471)
T ss_pred cccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999975 688999999999999999999999999999999999999999999864
No 31
>KOG0509|consensus
Probab=99.96 E-value=8.5e-29 Score=266.57 Aligned_cols=188 Identities=23% Similarity=0.264 Sum_probs=180.3
Q ss_pred HHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHcCCHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD-NYDISPLHEAVIADQHDI 546 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~g~~ei 546 (659)
+..|++.|+++.|+.|++. |.+++..|.+|.|+||+|+.+++++++++|+++|+++|... .-+.||||||+++|+..+
T Consensus 48 ~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~v 127 (600)
T KOG0509|consen 48 IVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISV 127 (600)
T ss_pred hhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHH
Confidence 5679999999999999998 99999999999999999999999999999999999999998 568899999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCc
Q psy9757 547 IRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIE 626 (659)
Q Consensus 547 vklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~ 626 (659)
+.+|+++||+++..|.+|.++||.|++.|+.-.+-+|+.+|+++|.+|.+|+||||+|+.+|+...++.||+.|+.+..+
T Consensus 128 v~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~ 207 (600)
T KOG0509|consen 128 VDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT 207 (600)
T ss_pred HHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999998
Q ss_pred c-cCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 627 N-KNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 627 d-~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
| ..|.||||+|+..|+..++++|++.|++-
T Consensus 208 d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~ 238 (600)
T KOG0509|consen 208 DDNHGNTPLHWAVVGGNLTAVKLLLEGGADL 238 (600)
T ss_pred ccccCCchHHHHHhcCCcceEehhhhcCCcc
Confidence 8 89999999999999999999777766653
No 32
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=4.1e-28 Score=271.37 Aligned_cols=171 Identities=26% Similarity=0.294 Sum_probs=159.6
Q ss_pred HHHHHHhcCCCcccCCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy9757 480 KIKEMQNYGADISMTDFD-RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLT 558 (659)
Q Consensus 480 iv~~Ll~~ga~vn~~d~~-g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~ 558 (659)
++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 677778889999999988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCcccCCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHH
Q psy9757 559 NEPMFLGDVLTNAAAR-GMIKRLQSYLLAGINLNQVDS-IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEV 636 (659)
Q Consensus 559 ~~~~~g~t~L~~Aa~~-g~~~~v~~Ll~~gad~n~~d~-~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~ 636 (659)
.++..|.||||+|+.. ++.+++++|+++|+++|.++. .|+||||+| .++.+++++|+++|+|++..|..|.||||+
T Consensus 229 ~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~ 306 (477)
T PHA02878 229 ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSS 306 (477)
T ss_pred CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 9999999999999976 789999999999999999886 799999999 578999999999999999999999999999
Q ss_pred HHHcC-cHHHHHHHHhC
Q psy9757 637 ANQMQ-LNDIIELLKSS 652 (659)
Q Consensus 637 A~~~g-~~eiv~~Ll~~ 652 (659)
|+..+ ..+++++|+++
T Consensus 307 A~~~~~~~~~~~~li~~ 323 (477)
T PHA02878 307 AVKQYLCINIGRILISN 323 (477)
T ss_pred HHHHcCccchHHHHHHH
Confidence 99754 56777777654
No 33
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.96 E-value=6.7e-28 Score=274.76 Aligned_cols=187 Identities=22% Similarity=0.256 Sum_probs=166.0
Q ss_pred HHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHH--cCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH--------
Q psy9757 471 SAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACS--VGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI-------- 540 (659)
Q Consensus 471 ~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~--~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~-------- 540 (659)
.|++.|+.+++++|+++|++++.+|..|+||||+|+. .++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~l 369 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNIL 369 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccc
Confidence 4788999999999999999999999999999999875 468899999999999999999999999999875
Q ss_pred ------cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH----HHcCCHHHHHHHHHcCC----------------------
Q psy9757 541 ------ADQHDIIRLLRHCGAHLTNEPMFLGDVLTNA----AARGMIKRLQSYLLAGI---------------------- 588 (659)
Q Consensus 541 ------~g~~eivklLl~~ga~~~~~~~~g~t~L~~A----a~~g~~~~v~~Ll~~ga---------------------- 588 (659)
.++.+++++|+++|++++.++..|.||||.+ ...++.+++++|++.|+
T Consensus 370 d~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~ 449 (764)
T PHA02716 370 DPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCI 449 (764)
T ss_pred cccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhh
Confidence 3789999999999999999999999999942 23467888888877543
Q ss_pred ---------------------------------------CcccCCCCCChHHHHHHHcCCH-----HHHHHHHHCCCCCC
Q psy9757 589 ---------------------------------------NLNQVDSIGLTPLHAAVLNNNI-----ESVRYLLSQHVDLT 624 (659)
Q Consensus 589 ---------------------------------------d~n~~d~~g~TpLh~Aa~~g~~-----~ivk~LL~~Gad~~ 624 (659)
++|..|..|+||||+|+.+|+. +++++|+++|++++
T Consensus 450 lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN 529 (764)
T PHA02716 450 IHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNIN 529 (764)
T ss_pred HHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCc
Confidence 2244577899999999999986 45599999999999
Q ss_pred CcccCCCcHHHHHHHcCcH-----HHHHHHHhCCCCCC
Q psy9757 625 IENKNGQSAIEVANQMQLN-----DIIELLKSSETKSK 657 (659)
Q Consensus 625 ~~d~~G~TpL~~A~~~g~~-----eiv~~Ll~~ga~~~ 657 (659)
.+|++|+||||+|+++|+. ++|++|+++|++.+
T Consensus 530 ~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~ 567 (764)
T PHA02716 530 IPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVD 567 (764)
T ss_pred ccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcc
Confidence 9999999999999999976 99999999999875
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.2e-27 Score=238.09 Aligned_cols=174 Identities=17% Similarity=0.261 Sum_probs=159.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHc
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG--KLDIVKYCLENGVSVHIRD-NYDISPLHEAVIA 541 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~ 541 (659)
..+|||.|++.|+.++|+.|++. ++..+..|.||||+|+..+ +.+++++|+++|++++.++ ..|.||||+|+..
T Consensus 21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~ 97 (209)
T PHA02859 21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSF 97 (209)
T ss_pred cCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHh
Confidence 45789999999999999999985 5667889999999999865 8999999999999999997 5899999998764
Q ss_pred ---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCcccCCCCCChHHHH-HHHcCCHHHHHH
Q psy9757 542 ---DQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAA--RGMIKRLQSYLLAGINLNQVDSIGLTPLHA-AVLNNNIESVRY 615 (659)
Q Consensus 542 ---g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~--~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~-Aa~~g~~~ivk~ 615 (659)
++.+++++|+++|++++.++..|.||||.|+. .++.+++++|++.|++++.+|..|.||||. |+..++.+++++
T Consensus 98 ~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~ 177 (209)
T PHA02859 98 NKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDF 177 (209)
T ss_pred CccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHH
Confidence 47999999999999999999999999999886 468999999999999999999999999996 567889999999
Q ss_pred HHHCCCCCCCcccCCCcHHHHHHHcC
Q psy9757 616 LLSQHVDLTIENKNGQSAIEVANQMQ 641 (659)
Q Consensus 616 LL~~Gad~~~~d~~G~TpL~~A~~~g 641 (659)
|+++|++++.+|..|.|||++|..++
T Consensus 178 Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 178 LTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 99999999999999999999998764
No 35
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.95 E-value=2.3e-27 Score=266.34 Aligned_cols=205 Identities=15% Similarity=0.258 Sum_probs=173.9
Q ss_pred hcChhhhhhhhccCCcHHHHHHHHcC------CHHHHHHHHhcCCCcccCCCCCCcHHHHHHHc---CCHHHHHHHHHCC
Q psy9757 451 LSGRQELNKLKKILYPALFQSAVREG------DIDKIKEMQNYGADISMTDFDRRNILHTACSV---GKLDIVKYCLENG 521 (659)
Q Consensus 451 ~~~~~~~~~~~~~~~~t~L~~Aa~~g------~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~---g~~~iv~~LL~~g 521 (659)
++.+.+++..+ .+.||||.|+.++ +.+++++|+++|+++|.++..|.||||.|+.. ++.+++++|+++|
T Consensus 57 l~~GAdvn~~~--~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G 134 (494)
T PHA02989 57 IDNGADVNYKG--YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG 134 (494)
T ss_pred HHcCCCccCCC--CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC
Confidence 44566666543 3467888887654 46899999999999999999999999988765 6789999999999
Q ss_pred CCC-CccCCCCCCHHHHHHHc--CCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcC----CHHHHHHHHHcCCCcccC
Q psy9757 522 VSV-HIRDNYDISPLHEAVIA--DQHDIIRLLRHCGAHLTN-EPMFLGDVLTNAAARG----MIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 522 adi-n~~d~~g~TpL~~Aa~~--g~~eivklLl~~ga~~~~-~~~~g~t~L~~Aa~~g----~~~~v~~Ll~~gad~n~~ 593 (659)
+|+ +.+|..|+||||+|+.. ++.+++++|+++|++++. .+..|.||||.|+..+ +.+++++|++.|+++|..
T Consensus 135 adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~ 214 (494)
T PHA02989 135 INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN 214 (494)
T ss_pred CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc
Confidence 999 78899999999998764 688999999999999988 5778999999987764 889999999999999999
Q ss_pred CCCCChHHHHHHHcC------CHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 594 DSIGLTPLHAAVLNN------NIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 594 d~~g~TpLh~Aa~~g------~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+..+.|+||.++..+ ..+++++|+. |++++.+|..|+||||+|+..++.+++++|+++|++++.
T Consensus 215 ~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~ 284 (494)
T PHA02989 215 NNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYN 284 (494)
T ss_pred CCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccc
Confidence 988999998876543 5677777654 699999999999999999999999999999999999764
No 36
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.95 E-value=4.3e-27 Score=274.33 Aligned_cols=204 Identities=20% Similarity=0.249 Sum_probs=171.0
Q ss_pred hhhhhhhhccCCcHHHHHHHHcCCH-HHHHHHHhcCCCcccCCCCCCcHHHHHHHcC-CHHHHHHHHHCCCCCCccCCCC
Q psy9757 454 RQELNKLKKILYPALFQSAVREGDI-DKIKEMQNYGADISMTDFDRRNILHTACSVG-KLDIVKYCLENGVSVHIRDNYD 531 (659)
Q Consensus 454 ~~~~~~~~~~~~~t~L~~Aa~~g~~-~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g-~~~iv~~LL~~gadin~~d~~g 531 (659)
+.+++.. +..+.|+||+|+..++. +++++|+++|++++..|..|+||||+|+..| ..+++++|++.|++++.+|..|
T Consensus 263 g~~vn~~-d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g 341 (682)
T PHA02876 263 GFSVNSI-DDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY 341 (682)
T ss_pred CCCCCCC-CCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCC
Confidence 3344433 23456788889988886 5888888999999888888999999999888 5888899999999999888889
Q ss_pred CCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC-
Q psy9757 532 ISPLHEAVIA-DQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN- 609 (659)
Q Consensus 532 ~TpL~~Aa~~-g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~- 609 (659)
.||||+|+.. ++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++
T Consensus 342 ~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~ 421 (682)
T PHA02876 342 ITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNP 421 (682)
T ss_pred CcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCH
Confidence 9999998875 56788888888999999888889999999999999999999999999988888888899998887665
Q ss_pred HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcC-cHHHHHHHHhCCCCCCC
Q psy9757 610 IESVRYLLSQHVDLTIENKNGQSAIEVANQMQ-LNDIIELLKSSETKSKV 658 (659)
Q Consensus 610 ~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g-~~eiv~~Ll~~ga~~~v 658 (659)
..++++|+++|++++.+|..|+||||+|+..+ +.+++++|+++|++.+.
T Consensus 422 ~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~ 471 (682)
T PHA02876 422 YMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA 471 (682)
T ss_pred HHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC
Confidence 45688888899999999999999999998866 67889999998888764
No 37
>KOG0508|consensus
Probab=99.95 E-value=4.1e-28 Score=250.73 Aligned_cols=190 Identities=23% Similarity=0.276 Sum_probs=175.9
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhc-CCCccc--------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCH
Q psy9757 464 LYPALFQSAVREGDIDKIKEMQNY-GADISM--------TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISP 534 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~--------~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~Tp 534 (659)
.+.+||.+||++|+.++|++|+++ ++++.. ...+|-+||-.|+..||+++|+.|+++|+++|.......||
T Consensus 41 ~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStP 120 (615)
T KOG0508|consen 41 NGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTP 120 (615)
T ss_pred CCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCcc
Confidence 455788889999999999999994 566533 34578899999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
|..||..|+++++|+|+++|+|++..|..|.|+||+||.+|+.+++++|++.|+|+|.++..|+|+||.|++.|++++++
T Consensus 121 LraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq 200 (615)
T KOG0508|consen 121 LRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQ 200 (615)
T ss_pred HHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy9757 615 YLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSET 654 (659)
Q Consensus 615 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 654 (659)
+|+++|+.+. +|..|.|||..|+..|+.++|++|++...
T Consensus 201 ~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~~~ 239 (615)
T KOG0508|consen 201 LLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQCET 239 (615)
T ss_pred HHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcCCc
Confidence 9999999985 55669999999999999999999996443
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=5.2e-27 Score=251.67 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=170.9
Q ss_pred HHHHcCCHHHHHHHHhcCCCcc------cCCCCCCcHHHHHHH--cCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 471 SAVREGDIDKIKEMQNYGADIS------MTDFDRRNILHTACS--VGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 471 ~Aa~~g~~~iv~~Ll~~ga~vn------~~d~~g~TpLh~Aa~--~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
+|+..+..+++++|+.+|++++ ..+..++|+||+|+. .|+.++|++|+++|++++.. ++.||||+|+..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence 6899999999999999999998 778889999999999 89999999999999999985 4489999999999
Q ss_pred CHHHHHHHHHcCCCCCCCC------CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 543 QHDIIRLLRHCGAHLTNEP------MFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 543 ~~eivklLl~~ga~~~~~~------~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
+.+++++|+++|++..... ..+.+++|.|+..++.+++++|+++|+++|.+|..|+||||+|+.+|+.+++++|
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelL 240 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWL 240 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999998543222 3477899999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCcccCCCcHHHHHHHcC--------cHHHHHHHHhCCCCCC
Q psy9757 617 LSQHVDLTIENKNGQSAIEVANQMQ--------LNDIIELLKSSETKSK 657 (659)
Q Consensus 617 L~~Gad~~~~d~~G~TpL~~A~~~g--------~~eiv~~Ll~~ga~~~ 657 (659)
+++|++++.+|..|.||||+|+..| +.+++++|+++|++.+
T Consensus 241 L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~ 289 (437)
T PHA02795 241 LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSID 289 (437)
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999998 4799999999998754
No 39
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.95 E-value=8.5e-27 Score=271.85 Aligned_cols=192 Identities=22% Similarity=0.297 Sum_probs=107.1
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHH--------------------------
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCL-------------------------- 518 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL-------------------------- 518 (659)
+.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..++.+++++|+
T Consensus 178 G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~ 257 (682)
T PHA02876 178 CITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSL 257 (682)
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHH
Confidence 445566666666666666666666666655555555555555555554444332
Q ss_pred ---HCCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCcccC
Q psy9757 519 ---ENGVSVHIRDNYDISPLHEAVIADQH-DIIRLLRHCGAHLTNEPMFLGDVLTNAAARG-MIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 519 ---~~gadin~~d~~g~TpL~~Aa~~g~~-eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g-~~~~v~~Ll~~gad~n~~ 593 (659)
+.|++++..+..|.||||+|+..++. +++++|+++|++++..+..|.||||+|+..| ..+++++|+..|++++..
T Consensus 258 ~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~ 337 (682)
T PHA02876 258 LLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA 337 (682)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc
Confidence 23334444555555555555555554 3555555555555555555555555555555 355555555555555555
Q ss_pred CCCCChHHHHHHHc-CCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 594 DSIGLTPLHAAVLN-NNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 594 d~~g~TpLh~Aa~~-g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
|..|+||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus 338 d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~ 401 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADI 401 (682)
T ss_pred ccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 55555555555543 2455555555555555555555555555555555555555555555543
No 40
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95 E-value=1.1e-26 Score=260.40 Aligned_cols=187 Identities=18% Similarity=0.169 Sum_probs=169.8
Q ss_pred HHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHc-----CCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC---C
Q psy9757 472 AVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSV-----GKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD---Q 543 (659)
Q Consensus 472 Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~-----g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g---~ 543 (659)
+...++.+++++|+++|+++|..+..|.||||.|+.+ ++.+++++|+++|+|+|.+|..|.||||+|+.++ +
T Consensus 45 ~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~ 124 (489)
T PHA02798 45 QRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINN 124 (489)
T ss_pred hCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcCh
Confidence 3344589999999999999999999999999999864 6789999999999999999999999999999875 7
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcCCCcccCC-CCCChHHHHHHHc----CCHHHHHH
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM---IKRLQSYLLAGINLNQVD-SIGLTPLHAAVLN----NNIESVRY 615 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~---~~~v~~Ll~~gad~n~~d-~~g~TpLh~Aa~~----g~~~ivk~ 615 (659)
.+++++|+++|++++..+..|.||||+|+..++ .+++++|++.|++++..+ ..|.||||.++.+ ++.+++++
T Consensus 125 ~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~ 204 (489)
T PHA02798 125 LEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKL 204 (489)
T ss_pred HHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHH
Confidence 899999999999999999999999999999988 999999999999999885 5789999998765 47899999
Q ss_pred HHHCCCCC---------------------------------------CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 616 LLSQHVDL---------------------------------------TIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 616 LL~~Gad~---------------------------------------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
|+++|+++ +.+|..|.||||+|+.+++.+++++|+++|+++
T Consensus 205 Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi 284 (489)
T PHA02798 205 FVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDI 284 (489)
T ss_pred HHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 99887644 456778999999999999999999999999997
Q ss_pred CC
Q psy9757 657 KV 658 (659)
Q Consensus 657 ~v 658 (659)
+.
T Consensus 285 n~ 286 (489)
T PHA02798 285 NI 286 (489)
T ss_pred cc
Confidence 64
No 41
>KOG0510|consensus
Probab=99.94 E-value=3.6e-26 Score=250.06 Aligned_cols=205 Identities=23% Similarity=0.280 Sum_probs=179.7
Q ss_pred cChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHh-----cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---
Q psy9757 452 SGRQELNKLKKILYPALFQSAVREGDIDKIKEMQN-----YGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVS--- 523 (659)
Q Consensus 452 ~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~-----~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gad--- 523 (659)
+.+.+..+.+ ..+..++|.|+++|..++.+..+. .+..+|..+..+.||||.|+..|+.++++.+|+.|..
T Consensus 175 ~~~a~~~K~~-~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~ 253 (929)
T KOG0510|consen 175 NKGADPCKSD-IDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIAD 253 (929)
T ss_pred hcCCCCCccc-CcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccch
Confidence 3444444433 344556899999999999999888 5677888899999999999999999999999998653
Q ss_pred ------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCC-C
Q psy9757 524 ------------VHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLL-AGI-N 589 (659)
Q Consensus 524 ------------in~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~ga-d 589 (659)
+|..|.+|.||||+|++.|+.+++..|+..|++++.++.++.||||.|+..|+.++++.||+ .|. .
T Consensus 254 ~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rl 333 (929)
T KOG0510|consen 254 VQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRL 333 (929)
T ss_pred hhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccc
Confidence 34578899999999999999999999999999999999999999999999999999999999 553 5
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC---CcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 590 LNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT---IENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 590 ~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~---~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
.|..|..|.||||+|+++|+..++++|++.|+... ..|.+|.||||.|+.+|+..+|++|+++|++..
T Consensus 334 lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~ 404 (929)
T KOG0510|consen 334 LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIG 404 (929)
T ss_pred cccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCcee
Confidence 78889999999999999999999999999999987 569999999999999999999999999999863
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.3e-25 Score=257.30 Aligned_cols=194 Identities=16% Similarity=0.146 Sum_probs=167.5
Q ss_pred hhccCCcHHHHHHHHc---CCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCccCCCCC
Q psy9757 460 LKKILYPALFQSAVRE---GDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKL----DIVKYCLENGVSVHIRDNYDI 532 (659)
Q Consensus 460 ~~~~~~~t~L~~Aa~~---g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~----~iv~~LL~~gadin~~d~~g~ 532 (659)
..+..+.|+||+|+.. |+.+++++|+++|++++..+..|+||||+|+..|+. ++++.|++.+..++..+. .
T Consensus 27 ~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~ 104 (661)
T PHA02917 27 TRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--N 104 (661)
T ss_pred ccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--c
Confidence 3355677899997555 889999999999999999999999999999999985 456788887544555443 3
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCcccCCC---CC----------
Q psy9757 533 SPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAA--ARGMIKRLQSYLLAGINLNQVDS---IG---------- 597 (659)
Q Consensus 533 TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa--~~g~~~~v~~Ll~~gad~n~~d~---~g---------- 597 (659)
+++++|+.+++.+++++|+++|++++.++..|.||||+|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~ 184 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRN 184 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccc
Confidence 7788899999999999999999999999999999999654 57899999999999999986653 34
Q ss_pred -ChHHHHHHH-----------cCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcH--HHHHHHHhCCCCC
Q psy9757 598 -LTPLHAAVL-----------NNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLN--DIIELLKSSETKS 656 (659)
Q Consensus 598 -~TpLh~Aa~-----------~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~--eiv~~Ll~~ga~~ 656 (659)
.||||+|+. +++.+++++|+++|++++.+|..|.||||+|+.+|+. ++|++|++ |++.
T Consensus 185 ~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 185 CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDN 256 (661)
T ss_pred cccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcc
Confidence 599999986 5689999999999999999999999999999999985 89999985 7653
No 43
>KOG0510|consensus
Probab=99.94 E-value=8e-26 Score=247.40 Aligned_cols=201 Identities=21% Similarity=0.272 Sum_probs=177.1
Q ss_pred hhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHH-----CCCCCCccCC
Q psy9757 455 QELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLE-----NGVSVHIRDN 529 (659)
Q Consensus 455 ~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~-----~gadin~~d~ 529 (659)
.+++. .+..+.||||+||..++.|..+.|++.|+++...|.+|++|+|.|+++|..++.+..+. ++..+|.-+.
T Consensus 145 ~dvnl-~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n 223 (929)
T KOG0510|consen 145 ADVNL-EDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNN 223 (929)
T ss_pred CCccc-cccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccC
Confidence 55543 34556778888999999998788899999998888999999999999999999998887 5677888889
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC
Q psy9757 530 YDISPLHEAVIADQHDIIRLLRHCGAH---------------LTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD 594 (659)
Q Consensus 530 ~g~TpL~~Aa~~g~~eivklLl~~ga~---------------~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d 594 (659)
.+.||||.|+..|+.++++.++++|.. +|..|.+|.||||+|++.|+.++++.|+..|++++.++
T Consensus 224 ~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn 303 (929)
T KOG0510|consen 224 EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKN 303 (929)
T ss_pred CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccC
Confidence 999999999999999999999988764 45678899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHH-CC-CCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLS-QH-VDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~-~G-ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
.++.||||.|+.+|+.++|+.||+ .| ...+..|..|.||||+|++.||..++++|+++|+..
T Consensus 304 ~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 304 KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF 367 (929)
T ss_pred CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh
Confidence 999999999999999999999998 44 335788999999999999999999999999999874
No 44
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.92 E-value=2.2e-24 Score=214.57 Aligned_cols=161 Identities=16% Similarity=0.128 Sum_probs=146.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCCC-CCCCcHHHHH
Q psy9757 495 DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD--QHDIIRLLRHCGAHLTNEP-MFLGDVLTNA 571 (659)
Q Consensus 495 d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g--~~eivklLl~~ga~~~~~~-~~g~t~L~~A 571 (659)
...+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ +.+++++|+++|++++..+ ..|.||||+|
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 34578999999999999999999985 5678899999999999854 8999999999999999987 4899999998
Q ss_pred HHc---CCHHHHHHHHHcCCCcccCCCCCChHHHHHHH--cCCHHHHHHHHHCCCCCCCcccCCCcHHHH-HHHcCcHHH
Q psy9757 572 AAR---GMIKRLQSYLLAGINLNQVDSIGLTPLHAAVL--NNNIESVRYLLSQHVDLTIENKNGQSAIEV-ANQMQLNDI 645 (659)
Q Consensus 572 a~~---g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~--~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~-A~~~g~~ei 645 (659)
+.. ++.+++++|+++|+++|.+|..|+||||+|+. .++.+++++|+++|++++.+|..|.||||. |+..++.++
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~i 174 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKI 174 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHH
Confidence 764 47999999999999999999999999999986 468999999999999999999999999995 677889999
Q ss_pred HHHHHhCCCCCCC
Q psy9757 646 IELLKSSETKSKV 658 (659)
Q Consensus 646 v~~Ll~~ga~~~v 658 (659)
+++|+++|++.+.
T Consensus 175 v~~Ll~~Gadi~~ 187 (209)
T PHA02859 175 FDFLTSLGIDINE 187 (209)
T ss_pred HHHHHHcCCCCCC
Confidence 9999999998764
No 45
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=2.9e-24 Score=254.50 Aligned_cols=176 Identities=28% Similarity=0.394 Sum_probs=165.5
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
..++|+.||..|+.++++.|+++|+++|..|..|+||||+|+..|+.+++++|+++|+++|.+|.+|.||||+|+..|+.
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~ 604 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH 604 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+++++|++.++..+ ...+.++||.|+.+|+.+++++|+++|+++|.+|.+|+||||+|+.+|+.+++++|+++|++++
T Consensus 605 ~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 605 KIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred HHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 99999999887654 3457799999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCC-CcHHHHHHHcCc
Q psy9757 625 IENKNG-QSAIEVANQMQL 642 (659)
Q Consensus 625 ~~d~~G-~TpL~~A~~~g~ 642 (659)
..|..| .||++++.....
T Consensus 683 ~~~~~g~~t~~~l~~~~~~ 701 (823)
T PLN03192 683 KANTDDDFSPTELRELLQK 701 (823)
T ss_pred CCCCCCCCCHHHHHHHHHH
Confidence 999998 999998865443
No 46
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=3.6e-24 Score=239.97 Aligned_cols=197 Identities=14% Similarity=0.052 Sum_probs=169.4
Q ss_pred hhhhhhhccCCcHHHHHHHHcC---CHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHHCCC--CCCcc
Q psy9757 455 QELNKLKKILYPALFQSAVREG---DIDKIKEMQNYGADISMTDFDRRNILHTACSVG--KLDIVKYCLENGV--SVHIR 527 (659)
Q Consensus 455 ~~~~~~~~~~~~t~L~~Aa~~g---~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~~~iv~~LL~~ga--din~~ 527 (659)
.+++...+..+.|+||+|+..| +.++|++|+++|++++.+|..|+||||+|+..+ +.+++++|++.|+ +++..
T Consensus 31 ~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~ 110 (672)
T PHA02730 31 HNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT 110 (672)
T ss_pred cchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc
Confidence 3555556667889999999997 599999999999999999999999999999977 7999999999965 55878
Q ss_pred CCCCCCHHHHHHH--cCCHHHHHHHHH-cCCCCCCCCC-----CCCcHHHHHHHcCCHHHHHHHHHcCCCcc-------c
Q psy9757 528 DNYDISPLHEAVI--ADQHDIIRLLRH-CGAHLTNEPM-----FLGDVLTNAAARGMIKRLQSYLLAGINLN-------Q 592 (659)
Q Consensus 528 d~~g~TpL~~Aa~--~g~~eivklLl~-~ga~~~~~~~-----~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n-------~ 592 (659)
+..+.+|||.++. +++.+++++|++ .+++++.... .+.+|++.+...++.+++++|+++|++++ .
T Consensus 111 ~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~ 190 (672)
T PHA02730 111 SNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCM 190 (672)
T ss_pred cccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccccc
Confidence 8889999999998 899999999997 6788876532 78999999999999999999999999996 2
Q ss_pred CCCCCC-hHHHHH------HHcCCHHHHHHHHHCCCCCCCcccCCCcHHHH--HHHcCcHHHHHHHHh
Q psy9757 593 VDSIGL-TPLHAA------VLNNNIESVRYLLSQHVDLTIENKNGQSAIEV--ANQMQLNDIIELLKS 651 (659)
Q Consensus 593 ~d~~g~-TpLh~A------a~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~--A~~~g~~eiv~~Ll~ 651 (659)
.+.... |.||++ ..+++.+++++|+++|++++.+|..|.||||+ +...++.|++++|++
T Consensus 191 ~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 191 YDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred ccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 344455 445533 46679999999999999999999999999995 556678999999998
No 47
>KOG0508|consensus
Probab=99.92 E-value=1.1e-24 Score=225.57 Aligned_cols=205 Identities=23% Similarity=0.274 Sum_probs=178.1
Q ss_pred hhhhhhhhhhccccCCCccc-ccccchhhHHHHHHHHHhhcChh--hhh-hhhccCCcHHHHHHHHcCCHHHHHHHHhcC
Q psy9757 413 TLQQKKDIMMTNIRGELSTD-AIHNNELDLAAAVAKTLHLSGRQ--ELN-KLKKILYPALFQSAVREGDIDKIKEMQNYG 488 (659)
Q Consensus 413 ~~~~vk~l~~~~l~gelt~~-a~~~~~~~~i~~l~~~l~~~~~~--~~~-~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g 488 (659)
+.+++..++.....+..... +..+|+.++++++++.+..+... .+. .-....+.+||..|+..||+++||.|+++|
T Consensus 28 s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g 107 (615)
T KOG0508|consen 28 SNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG 107 (615)
T ss_pred chHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc
Confidence 45778888877666664433 34899999999998866432111 011 011334577888899999999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q psy9757 489 ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVL 568 (659)
Q Consensus 489 a~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L 568 (659)
+++|.......|||.-||.-|+.++|+||+++|+|++..|..|.|.||+||..||.+++++|++.|+|+|.++..|+|+|
T Consensus 108 a~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTAL 187 (615)
T KOG0508|consen 108 ASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTAL 187 (615)
T ss_pred CccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHH
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 569 TNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 569 ~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
|.+++.|+.+++++|+.+|+.++. |..|.|||..|+..|+.++|++|++
T Consensus 188 H~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 188 HDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HhhhhcccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhc
Confidence 999999999999999999998764 5569999999999999999999996
No 48
>PHA02730 ankyrin-like protein; Provisional
Probab=99.92 E-value=8.9e-24 Score=236.87 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=71.4
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCC--CCCCCCCCCCcHHHH---HHHcC-------
Q psy9757 512 DIVKYCLENGVSVHIRDNYDISPLHEAVIADQ----HDIIRLLRHCGA--HLTNEPMFLGDVLTN---AAARG------- 575 (659)
Q Consensus 512 ~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~----~eivklLl~~ga--~~~~~~~~g~t~L~~---Aa~~g------- 575 (659)
+++++|+++|+++|.. ..|.||||+|+..++ .+++++|+++|+ +++..+..|.||||. |...+
T Consensus 360 eIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e 438 (672)
T PHA02730 360 PILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYE 438 (672)
T ss_pred HHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccc
Confidence 3344444444444432 345555555554443 455555555554 345555555555552 21111
Q ss_pred --CHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCccc-CCCcHHHHHHH--cCcHHHHHHHH
Q psy9757 576 --MIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENK-NGQSAIEVANQ--MQLNDIIELLK 650 (659)
Q Consensus 576 --~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~-~G~TpL~~A~~--~g~~eiv~~Ll 650 (659)
..+++++|+.+|+++|.+|..|+||||+|+..++.+++++|+++|++++.+|. .|.||||+|+. .++.+++++|+
T Consensus 439 ~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LL 518 (672)
T PHA02730 439 TILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLL 518 (672)
T ss_pred hhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHH
Confidence 12345555555555555555555555555555555555555555555555554 35555555554 24555555555
Q ss_pred hCCCC
Q psy9757 651 SSETK 655 (659)
Q Consensus 651 ~~ga~ 655 (659)
++|++
T Consensus 519 s~ga~ 523 (672)
T PHA02730 519 SYHPT 523 (672)
T ss_pred HcCCC
Confidence 55544
No 49
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92 E-value=5.5e-24 Score=228.46 Aligned_cols=186 Identities=18% Similarity=0.101 Sum_probs=160.1
Q ss_pred hccCCcHHHHHHHH--cCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcc------CCCCC
Q psy9757 461 KKILYPALFQSAVR--EGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIR------DNYDI 532 (659)
Q Consensus 461 ~~~~~~t~L~~Aa~--~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~------d~~g~ 532 (659)
......++||+|+. .|+.++|++|+++|++++.. ++.||||.|+..++.+++++|+++|++.+.. +..+.
T Consensus 112 ~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~ 189 (437)
T PHA02795 112 NCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQY 189 (437)
T ss_pred ccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhcc
Confidence 34457899999999 99999999999999999985 4589999999999999999999999854222 13478
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC---
Q psy9757 533 SPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN--- 609 (659)
Q Consensus 533 TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~--- 609 (659)
|++|.|+..++.+++++|+++|+++|.++..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.+|+
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~ 269 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIA 269 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred -----HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 610 -----IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 610 -----~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
.+++++|+++|++++..+..+ +.. ...+.++++.|+++.
T Consensus 270 ~~~~~~eIvelLL~~gadI~~~~~~~---~~~--~~~n~~~ik~lI~y~ 313 (437)
T PHA02795 270 RRETHLKILEILLREPLSIDCIKLAI---LNN--TIENHDVIKLCIKYF 313 (437)
T ss_pred ccccHHHHHHHHHhCCCCCCchhHHh---hhc--ccchHHHHHHHHHHH
Confidence 699999999999998754322 211 112567777776544
No 50
>PHA02917 ankyrin-like protein; Provisional
Probab=99.92 E-value=7.2e-24 Score=242.95 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=173.3
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHH----HHHHHHhcCCCcccCCCCCCcHHHHHHHcCC
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDID----KIKEMQNYGADISMTDFDRRNILHTACSVGK 510 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~----iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~ 510 (659)
..++.++++.+ ++.+.+++. .+..+.||||+|+..|+.+ +++.|++++...+..+ ..+++|+|+..|+
T Consensus 44 ~~~~~~~v~~L-----l~~ga~v~~-~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~--~~~~~~~a~~~~~ 115 (661)
T PHA02917 44 HCNNVEVVKLL-----LDSGTNPLH-KNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIND--FNIFSYMKSKNVD 115 (661)
T ss_pred hcCcHHHHHHH-----HHCCCCccc-cCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCC--cchHHHHHhhcCC
Confidence 34556666666 344556653 4556778999999999855 5578887654444443 3477888999999
Q ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCCCCCC---CC-----------CcHHHHHHH-
Q psy9757 511 LDIVKYCLENGVSVHIRDNYDISPLHEAV--IADQHDIIRLLRHCGAHLTNEPM---FL-----------GDVLTNAAA- 573 (659)
Q Consensus 511 ~~iv~~LL~~gadin~~d~~g~TpL~~Aa--~~g~~eivklLl~~ga~~~~~~~---~g-----------~t~L~~Aa~- 573 (659)
.++|++|+++|+|+|.+|..|+||||.|+ ..|+.+++++|+++|++++..+. .| .||||+|+.
T Consensus 116 ~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~ 195 (661)
T PHA02917 116 VDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIIS 195 (661)
T ss_pred HHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhh
Confidence 99999999999999999999999999654 57899999999999999986543 23 599999986
Q ss_pred ----------cCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCH--HHHHHHHHCCCCCC----CcccCCCcHHHHH
Q psy9757 574 ----------RGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNI--ESVRYLLSQHVDLT----IENKNGQSAIEVA 637 (659)
Q Consensus 574 ----------~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~--~ivk~LL~~Gad~~----~~d~~G~TpL~~A 637 (659)
.++.+++++|++.|+++|.+|.+|+||||+|+.+|+. ++|++|++ |++.+ ..|..|.+|+++|
T Consensus 196 ~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a 274 (661)
T PHA02917 196 HLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMA 274 (661)
T ss_pred cccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHH
Confidence 4689999999999999999999999999999999985 79999975 88875 5677889999999
Q ss_pred HHc---------CcHHHHHHHHhCCCCC
Q psy9757 638 NQM---------QLNDIIELLKSSETKS 656 (659)
Q Consensus 638 ~~~---------g~~eiv~~Ll~~ga~~ 656 (659)
+.. .+.+++++|+++|++.
T Consensus 275 ~yl~~~~~~~~~v~~~iv~~Li~~Ga~~ 302 (661)
T PHA02917 275 DYLNSDYRYNKDVDLDLVKLFLENGKPH 302 (661)
T ss_pred HHHHhhccccccchHHHHHHHHhCCCCC
Confidence 842 1789999999999863
No 51
>KOG4177|consensus
Probab=99.91 E-value=6.8e-24 Score=246.07 Aligned_cols=191 Identities=22% Similarity=0.311 Sum_probs=174.0
Q ss_pred CcHHHHHHHHcC-CHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREG-DIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g-~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
+.|++|.|+..| ..+....+++.|+++|.....|.||||.|+..|+.++++.|++.++..+.....+.++||.|...+.
T Consensus 440 G~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~ 519 (1143)
T KOG4177|consen 440 GYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDT 519 (1143)
T ss_pred CCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhh
Confidence 367788888888 7788888888888888888888888888888888888888888888888778888888888888888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDL 623 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~ 623 (659)
..+++.++++|++++.++..++||||.|+..|+..+|++|+++|++++.+++.|+||||.||..|+.+|+++|+++|+++
T Consensus 520 v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v 599 (1143)
T KOG4177|consen 520 VKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV 599 (1143)
T ss_pred HHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 624 TIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 624 ~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|..|.+|.|||++|++.|+.+++++|+..++.
T Consensus 600 na~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 600 NAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred CcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 99999999999999999999999999988877
No 52
>PHA02792 ankyrin-like protein; Provisional
Probab=99.90 E-value=7e-23 Score=227.41 Aligned_cols=216 Identities=16% Similarity=0.141 Sum_probs=170.0
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHH-cCCHHHHHHHHhcCCCc----------------------
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVR-EGDIDKIKEMQNYGADI---------------------- 491 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~-~g~~~iv~~Ll~~ga~v---------------------- 491 (659)
..++.++++.+ ...+.+++..... +.+++++|+. .++.|++++|+++|+++
T Consensus 81 ~n~~lElvk~L-----I~~GAdvN~~~n~-~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~ 154 (631)
T PHA02792 81 DNIDIELLKLL-----ISKGLEINSIKNG-INIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYN 154 (631)
T ss_pred hcccHHHHHHH-----HHcCCCcccccCC-CCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccc
Confidence 34555555555 4457777766554 6678788855 68999999999998763
Q ss_pred --------------ccCCCCCCcHHHHHHHcC-------CHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC--CHHHHH
Q psy9757 492 --------------SMTDFDRRNILHTACSVG-------KLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD--QHDIIR 548 (659)
Q Consensus 492 --------------n~~d~~g~TpLh~Aa~~g-------~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g--~~eivk 548 (659)
|..|..|+||||+|+.++ +.++++.|+++|++++.+|..|.||||+|+.+. ..|+++
T Consensus 155 ~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~ 234 (631)
T PHA02792 155 WDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFD 234 (631)
T ss_pred hhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHH
Confidence 234556889999999888 789999999999999999999999999999887 556666
Q ss_pred HHHHc---------------------------------------------------------------------------
Q psy9757 549 LLRHC--------------------------------------------------------------------------- 553 (659)
Q Consensus 549 lLl~~--------------------------------------------------------------------------- 553 (659)
+|++.
T Consensus 235 ~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl 314 (631)
T PHA02792 235 ALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYV 314 (631)
T ss_pred HHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 66542
Q ss_pred ----------------CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCC--ChHHHHHHHcCCHH---H
Q psy9757 554 ----------------GAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIG--LTPLHAAVLNNNIE---S 612 (659)
Q Consensus 554 ----------------ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g--~TpLh~Aa~~g~~~---i 612 (659)
|++.. .......++.|+..|+.+++++|+++|+++|.+|..| .||||+|+.....+ +
T Consensus 315 ~~~~v~ieiIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~I 392 (631)
T PHA02792 315 SYHTVYINVIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSI 392 (631)
T ss_pred hcCCccHHHHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHH
Confidence 22221 1124556888999999999999999999999988775 69999988776654 5
Q ss_pred HHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 613 VRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 613 vk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+++|+++|++++.+|..|.||||+|+..++.+++++|+++|++.+.
T Consensus 393 lklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~ 438 (631)
T PHA02792 393 LKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI 438 (631)
T ss_pred HHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 7888999999999999999999999999999999999999998754
No 53
>KOG0502|consensus
Probab=99.90 E-value=6.9e-24 Score=200.24 Aligned_cols=213 Identities=21% Similarity=0.246 Sum_probs=185.1
Q ss_pred cccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCH
Q psy9757 432 DAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKL 511 (659)
Q Consensus 432 ~a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~ 511 (659)
.+...++.+.....+.+. ...+...+.. +...++.|+-+++..++..++.+|+..|..+..+++|+.+++...++
T Consensus 68 ~~~~s~nsd~~v~s~~~~----~~~~~~t~p~-g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L 142 (296)
T KOG0502|consen 68 VAVRSGNSDVAVQSAQLD----PDAIDETDPE-GWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHL 142 (296)
T ss_pred hhhhcCCcHHHHHhhccC----CCCCCCCCch-hhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHH
Confidence 344666666665553322 2222333333 45667889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q psy9757 512 DIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLN 591 (659)
Q Consensus 512 ~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n 591 (659)
+++..|.++ .+|..|++|.|||.||+..|+.++|++|++.|++++...+...++|.+|++.|+.+++++|+.++.|+|
T Consensus 143 ~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVN 220 (296)
T KOG0502|consen 143 DVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVN 220 (296)
T ss_pred HHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc
Confidence 888777665 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhC
Q psy9757 592 QVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSS 652 (659)
Q Consensus 592 ~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ 652 (659)
..|.+|-|||-+|++-|+.+|++.|+..|++++..+..|+++++.|+..|+. +|+..+++
T Consensus 221 vyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~ 280 (296)
T KOG0502|consen 221 VYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEK 280 (296)
T ss_pred eeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998 66555443
No 54
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90 E-value=1.8e-22 Score=239.33 Aligned_cols=183 Identities=19% Similarity=0.177 Sum_probs=165.3
Q ss_pred HHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q psy9757 472 AVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLR 551 (659)
Q Consensus 472 Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl 551 (659)
.....+.++-+.+.+.+.. ..+.++.++||.||..|+.++++.|+++|+++|..|..|.||||+|+..|+.+++++|+
T Consensus 501 ~~~l~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll 578 (823)
T PLN03192 501 HKELHDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLL 578 (823)
T ss_pred hhhhccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 3444566666677666653 23445789999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCC
Q psy9757 552 HCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQ 631 (659)
Q Consensus 552 ~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~ 631 (659)
++|++++.+|..|+||||.|+..|+.+++++|++.++..+. ..+.++||.|+.+|+.+++++|+++|++++.+|..|.
T Consensus 579 ~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~ 656 (823)
T PLN03192 579 KHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA 656 (823)
T ss_pred hcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999998876553 4577999999999999999999999999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 632 SAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 632 TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
||||+|+..|+.+++++|+++|++.+.
T Consensus 657 TpLh~A~~~g~~~iv~~Ll~~GAdv~~ 683 (823)
T PLN03192 657 TALQVAMAEDHVDMVRLLIMNGADVDK 683 (823)
T ss_pred CHHHHHHHCCcHHHHHHHHHcCCCCCC
Confidence 999999999999999999999998753
No 55
>KOG4177|consensus
Probab=99.90 E-value=4.9e-24 Score=247.21 Aligned_cols=218 Identities=23% Similarity=0.262 Sum_probs=184.8
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC-CHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG-KLDI 513 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g-~~~i 513 (659)
..+..+.++.+. ..+...+ .....+-|+||.|+..++..+++.++++|++++.++..|.||+|.|+..| ..++
T Consensus 383 ~~g~~~~v~Lll-----~~ga~~~-~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~ 456 (1143)
T KOG4177|consen 383 KSGRVSVVELLL-----EAGADPN-SAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQI 456 (1143)
T ss_pred ccCchhHHHhhh-----hccCCcc-cCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhh
Confidence 455555555442 2223333 33445567788888888888888888888888888888888888888888 7788
Q ss_pred HHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 514 VKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 514 v~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
...+++.|.++|.....|.||||.|+..||.++++.|++.++..+.....+-+++|.+...+...+++.+++.|++++.+
T Consensus 457 ~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~ 536 (1143)
T KOG4177|consen 457 ARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLR 536 (1143)
T ss_pred hhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehh
Confidence 88888888888888888888888888888888888888888888888888888888888888888888899999999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 594 DSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 594 d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+..|+||||.|+.+|+.++|++|+++|+|++.+++.|+||||.|+..|+.+|+.+|+++|++++.
T Consensus 537 ~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna 601 (1143)
T KOG4177|consen 537 TGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA 601 (1143)
T ss_pred cccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999874
No 56
>PHA02792 ankyrin-like protein; Provisional
Probab=99.88 E-value=7.8e-22 Score=219.11 Aligned_cols=196 Identities=12% Similarity=0.125 Sum_probs=165.2
Q ss_pred hhccCCcHHHHHHHHcC-------CHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC--CHHHHHHHHH-----------
Q psy9757 460 LKKILYPALFQSAVREG-------DIDKIKEMQNYGADISMTDFDRRNILHTACSVG--KLDIVKYCLE----------- 519 (659)
Q Consensus 460 ~~~~~~~t~L~~Aa~~g-------~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g--~~~iv~~LL~----------- 519 (659)
.++..+.|+||+|+.++ +.++++.|+++|++++..|..|.||||+|+.+. ..|++++|++
T Consensus 170 ~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~ 249 (631)
T PHA02792 170 YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNI 249 (631)
T ss_pred cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhH
Confidence 45666889999999999 899999999999999999999999999999887 4455555443
Q ss_pred --------------------------------------------------------------------------------
Q psy9757 520 -------------------------------------------------------------------------------- 519 (659)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (659)
T Consensus 250 l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId 329 (631)
T PHA02792 250 LSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMID 329 (631)
T ss_pred HHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence
Q ss_pred CCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC--CcHHHHHHHcCCH---HHHHHHHHcCCCcccCC
Q psy9757 520 NGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFL--GDVLTNAAARGMI---KRLQSYLLAGINLNQVD 594 (659)
Q Consensus 520 ~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g--~t~L~~Aa~~g~~---~~v~~Ll~~gad~n~~d 594 (659)
+|++++ ......+++.|+..|+.+++++|+++|++++.++..| .||||.|+..... +++++|+++|+++|.+|
T Consensus 330 ~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD 407 (631)
T PHA02792 330 EGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKID 407 (631)
T ss_pred CCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcccccc
Confidence 333332 1124567889999999999999999999999988775 6999998776654 46899999999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHH----------cCcHHHHHHHHhCCCCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQ----------MQLNDIIELLKSSETKSK 657 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~----------~g~~eiv~~Ll~~ga~~~ 657 (659)
..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+. ....+++++|++++.+.+
T Consensus 408 ~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~ 480 (631)
T PHA02792 408 KHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE 480 (631)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence 999999999999999999999999999999999999999999975 223677999999997753
No 57
>KOG0514|consensus
Probab=99.88 E-value=8.5e-23 Score=205.79 Aligned_cols=161 Identities=22% Similarity=0.357 Sum_probs=145.6
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHc-----CCHHHHHHHHHcCCCCCCC-CCC
Q psy9757 491 ISMTDFDRRNILHTACSVGKLDIVKYCLENG-VSVHIRDNYDISPLHEAVIA-----DQHDIIRLLRHCGAHLTNE-PMF 563 (659)
Q Consensus 491 vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~g-adin~~d~~g~TpL~~Aa~~-----g~~eivklLl~~ga~~~~~-~~~ 563 (659)
+|..|.+|+|+||||+.++++++|+.||+.| +++|.+|+-|+||+++++.. .+.++|.-|.+.| ++|++ ...
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 4778899999999999999999999999987 78999999999999998864 5678888888775 56655 458
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCCcccCCCcHHHHHHHcCc
Q psy9757 564 LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ-HVDLTIENKNGQSAIEVANQMQL 642 (659)
Q Consensus 564 g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~-Gad~~~~d~~G~TpL~~A~~~g~ 642 (659)
|+|+|++|+.+|+.++++.||..|+|+|.+|.+|.|+|++|+++||.|++++||.. ++|....|.+|.|+|.+|...||
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999975 89999999999999999999999
Q ss_pred HHHHHHHHhC
Q psy9757 643 NDIIELLKSS 652 (659)
Q Consensus 643 ~eiv~~Ll~~ 652 (659)
.||.-+|..+
T Consensus 420 ~eIa~mlYa~ 429 (452)
T KOG0514|consen 420 REIAVMLYAH 429 (452)
T ss_pred hHHHHHHHHH
Confidence 9999888643
No 58
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=2.1e-21 Score=186.03 Aligned_cols=145 Identities=18% Similarity=0.153 Sum_probs=124.5
Q ss_pred cCCCcccCCCCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q psy9757 487 YGADISMTDFDRRNILHTACSVGKL----DIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDI---IRLLRHCGAHLTN 559 (659)
Q Consensus 487 ~ga~vn~~d~~g~TpLh~Aa~~g~~----~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ei---vklLl~~ga~~~~ 559 (659)
++++++..+.++.++||.||+.|+. +++++|++.|++++.+|..|+||||+|+..|+.+. +++|+++|++++.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 4667777778888899999999987 66667788888888888899999999998887654 7889999999998
Q ss_pred CC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCC
Q psy9757 560 EP-MFLGDVLTNAAARGMIKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQ 631 (659)
Q Consensus 560 ~~-~~g~t~L~~Aa~~g~~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~ 631 (659)
++ ..|.||||+|+..++.+++++|+. .|++++.++..|+||||+|+..++.+++++|+++|++++.++..|.
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 87 478999999999999999999985 7899999999999999999999999999999999999988887764
No 59
>KOG0502|consensus
Probab=99.86 E-value=4e-22 Score=188.37 Aligned_cols=167 Identities=19% Similarity=0.182 Sum_probs=156.5
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.+++.+++.+.+++.+..+.++ .+|..|..|.|||.+|++.|++++|++||+.|+|++..-++..|+|.+|++.|..+
T Consensus 130 ~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytd 207 (296)
T KOG0502|consen 130 WSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTD 207 (296)
T ss_pred CChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHH
Confidence 3567789999998888877765 57899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy9757 546 IIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTI 625 (659)
Q Consensus 546 ivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~ 625 (659)
+|++|+.++.++|.-|.+|.|||.+|++.|+.+|++.|+..|++++..+..|++++..|+..|+. +|+..+++.+....
T Consensus 208 iV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~ 286 (296)
T KOG0502|consen 208 IVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLC 286 (296)
T ss_pred HHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998 99999999888888
Q ss_pred cccCCCcHHH
Q psy9757 626 ENKNGQSAIE 635 (659)
Q Consensus 626 ~d~~G~TpL~ 635 (659)
+|+.-++|+|
T Consensus 287 Q~~~~~~~~~ 296 (296)
T KOG0502|consen 287 QDSEKRTPLH 296 (296)
T ss_pred hcccCCCCCC
Confidence 8888888765
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.86 E-value=2.9e-21 Score=227.43 Aligned_cols=190 Identities=19% Similarity=0.156 Sum_probs=156.0
Q ss_pred ccCCcHHHH-HHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcC---CHHHHHHHHHCCCC------CC----cc
Q psy9757 462 KILYPALFQ-SAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVG---KLDIVKYCLENGVS------VH----IR 527 (659)
Q Consensus 462 ~~~~~t~L~-~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g---~~~iv~~LL~~gad------in----~~ 527 (659)
+..+.|+|| .|+.+++.++++.|+++|+ .+..|.||||.|+..+ ...+++.+++.+.+ ++ ..
T Consensus 49 d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~ 124 (743)
T TIGR00870 49 DRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSE 124 (743)
T ss_pred CccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccc
Confidence 345678888 8999999999999999987 5678999999999732 22344444444422 11 12
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 528 DNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEP--------------MFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 528 d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~--------------~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
+..|.||||+|+.+|+.+++++|+++|++++.+. ..|.+|||.|+..|+.+++++|++.|+++|.+
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 3569999999999999999999999999998643 25889999999999999999999999999999
Q ss_pred CCCCChHHHHHHHcC---------CHHHHHHHHHCCCCC-------CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 594 DSIGLTPLHAAVLNN---------NIESVRYLLSQHVDL-------TIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 594 d~~g~TpLh~Aa~~g---------~~~ivk~LL~~Gad~-------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|..|+||||+|+..+ ...+.+++++.++.. +.+|..|.||||+|+..|+.+++++|++.+.+
T Consensus 205 d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~ 282 (743)
T TIGR00870 205 DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK 282 (743)
T ss_pred hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh
Confidence 999999999999987 234666777665554 67899999999999999999999999985543
No 61
>KOG0505|consensus
Probab=99.85 E-value=3.5e-21 Score=203.77 Aligned_cols=188 Identities=28% Similarity=0.418 Sum_probs=136.6
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHH
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDII 547 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eiv 547 (659)
.+..|+..|+.+-++.|+..|++++..+.+|.|+||-||.-.+.+||+||+++|++||..|..++||||.|+.+||..++
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~ 122 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIV 122 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCcHHHHHHH-------------cC-------------CHHHHHHHHHcCCCcccCCCCCChHH
Q psy9757 548 RLLRHCGAHLTNEPMFLGDVLTNAAA-------------RG-------------MIKRLQSYLLAGINLNQVDSIGLTPL 601 (659)
Q Consensus 548 klLl~~ga~~~~~~~~g~t~L~~Aa~-------------~g-------------~~~~v~~Ll~~gad~n~~d~~g~TpL 601 (659)
++|+.+|+++...+..|..|+.++.. .| -+.-+...+..|...+..+..|.|.|
T Consensus 123 ~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~l 202 (527)
T KOG0505|consen 123 EYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATAL 202 (527)
T ss_pred HHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHH
Confidence 99999998866555555443222110 00 01111222335555555555566666
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 602 HAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 602 h~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|.|+.+|..++.++|+++|.+++++|.+|+||||.|+..|+.++.++|+++|++
T Consensus 203 HvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~ 256 (527)
T KOG0505|consen 203 HVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD 256 (527)
T ss_pred HHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc
Confidence 666666666666666666666666666666666666666666666666666665
No 62
>KOG0507|consensus
Probab=99.85 E-value=4e-21 Score=209.40 Aligned_cols=194 Identities=22% Similarity=0.201 Sum_probs=160.8
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 463 ILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
..+-|.||.|+.+|+.+++++|+++.+-++..+..|.+|||+|+++|+.+++++||.++..+|..+.+|.||||.|++.|
T Consensus 47 ~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhg 126 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHG 126 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhc
Confidence 35557788888888888888888888888888888888899988888888888888888888888888888999988888
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc--------ccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 543 QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINL--------NQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 543 ~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~--------n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
|.+++.+|+.+|+++-..+..+.|+|-.|++.|..++++.|+...... ..++-.+-+|||+|+++|+.++++
T Consensus 127 h~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~ 206 (854)
T KOG0507|consen 127 HLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQ 206 (854)
T ss_pred chHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHH
Confidence 888888888888888888888888888888888888888888763221 123345678888888888888888
Q ss_pred HHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 615 YLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 615 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
.|+++|.++|...+.| |+||.|+..|..++|.+|++-|.+..
T Consensus 207 ~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h 248 (854)
T KOG0507|consen 207 ALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTH 248 (854)
T ss_pred HHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhccccc
Confidence 8888888888776654 88888888888888888888887643
No 63
>KOG0514|consensus
Probab=99.84 E-value=1.9e-20 Score=188.91 Aligned_cols=159 Identities=19% Similarity=0.196 Sum_probs=145.6
Q ss_pred hhccCCcHHHHHHHHcCCHHHHHHHHhcC-CCcccCCCCCCcHHHHHHHc-----CCHHHHHHHHHCCCCCCccC-CCCC
Q psy9757 460 LKKILYPALFQSAVREGDIDKIKEMQNYG-ADISMTDFDRRNILHTACSV-----GKLDIVKYCLENGVSVHIRD-NYDI 532 (659)
Q Consensus 460 ~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~g-a~vn~~d~~g~TpLh~Aa~~-----g~~~iv~~LL~~gadin~~d-~~g~ 532 (659)
+.+.+++|.||||+.++++++|+.||+.| .++|.++..|+||+++|+.. .+.++|..|.+.| |||.+- ..|+
T Consensus 263 laDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQ 341 (452)
T KOG0514|consen 263 LADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQ 341 (452)
T ss_pred hhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcc
Confidence 34667889999999999999999999998 79999999999999999864 3678999998886 777764 5799
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccCCCCCChHHHHHHHcCCHH
Q psy9757 533 SPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLA-GINLNQVDSIGLTPLHAAVLNNNIE 611 (659)
Q Consensus 533 TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-gad~n~~d~~g~TpLh~Aa~~g~~~ 611 (659)
|+|++|+..|+.++|+.|+.+|+|+|.+|.+|.|+|++|+++||.|++++||.. ++|+...|.+|.|+|.+|...|+.+
T Consensus 342 TALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 342 TALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHRE 421 (452)
T ss_pred hhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchH
Confidence 999999999999999999999999999999999999999999999999999984 6899999999999999999999999
Q ss_pred HHHHHHHC
Q psy9757 612 SVRYLLSQ 619 (659)
Q Consensus 612 ivk~LL~~ 619 (659)
|.-+|..+
T Consensus 422 Ia~mlYa~ 429 (452)
T KOG0514|consen 422 IAVMLYAH 429 (452)
T ss_pred HHHHHHHH
Confidence 99888754
No 64
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84 E-value=2.6e-20 Score=178.48 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=127.6
Q ss_pred CCCCCCccCCCCCCHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH---HHHHHHHcCCCccc
Q psy9757 520 NGVSVHIRDNYDISPLHEAVIADQH----DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIK---RLQSYLLAGINLNQ 592 (659)
Q Consensus 520 ~gadin~~d~~g~TpL~~Aa~~g~~----eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~---~v~~Ll~~gad~n~ 592 (659)
++++++..+..+.++||.|++.|+. +++++|++.|+.++..+..|+||||+|+..|+.+ ++++|++.|+++|.
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~ 88 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA 88 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence 5678888888999999999999998 6777888999999999999999999999998765 48999999999999
Q ss_pred CC-CCCChHHHHHHHcCCHHHHHHHHH-CCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 593 VD-SIGLTPLHAAVLNNNIESVRYLLS-QHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 593 ~d-~~g~TpLh~Aa~~g~~~ivk~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
++ ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++.+
T Consensus 89 ~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 89 RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD 155 (166)
T ss_pred CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 98 589999999999999999999995 899999999999999999999999999999999998864
No 65
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.84 E-value=3.3e-20 Score=218.43 Aligned_cols=186 Identities=18% Similarity=0.125 Sum_probs=155.4
Q ss_pred cHHHHHHHHcCCHHHHHHHHhc--CCCcccCCCCCCcHHH-HHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc-
Q psy9757 466 PALFQSAVREGDIDKIKEMQNY--GADISMTDFDRRNILH-TACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA- 541 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~--ga~vn~~d~~g~TpLh-~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~- 541 (659)
...++.|++.|+.+.++.++++ +.++|..|..|+|||| .|+.+++.+++++|+++|+ .+..|.||||.|+..
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~ 93 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEY 93 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhcc
Confidence 3567889999999999999998 8999999999999999 8899999999999999987 677899999999973
Q ss_pred --CCHHHHHHHHHcCCC------CC----CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC--------------C
Q psy9757 542 --DQHDIIRLLRHCGAH------LT----NEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD--------------S 595 (659)
Q Consensus 542 --g~~eivklLl~~ga~------~~----~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d--------------~ 595 (659)
+..++++++.+.+.+ .+ .....|.||||+|+.+|+.+++++|+++|++++.++ .
T Consensus 94 ~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~ 173 (743)
T TIGR00870 94 VDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFY 173 (743)
T ss_pred HHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCccc
Confidence 223344555544432 11 123469999999999999999999999999998653 2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcC---------cHHHHHHHHhCCCC
Q psy9757 596 IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQ---------LNDIIELLKSSETK 655 (659)
Q Consensus 596 ~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g---------~~eiv~~Ll~~ga~ 655 (659)
.|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ ...+.+++++.+++
T Consensus 174 ~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 174 HGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred ccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999986 33456666655444
No 66
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1.2e-19 Score=187.98 Aligned_cols=155 Identities=18% Similarity=0.141 Sum_probs=133.9
Q ss_pred hhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCC----CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcc-CCCCCC
Q psy9757 459 KLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTD----FDRRNILHTACSVGKLDIVKYCLENGVSVHIR-DNYDIS 533 (659)
Q Consensus 459 ~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d----~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~-d~~g~T 533 (659)
..++...+++||.|++.|+.+++++|+++|++++.++ ..|.||||+|+..++.+++++|+++|+++|.+ +..|.|
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~T 106 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKIT 106 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCC
Confidence 3445667789999999999999999999999999874 58999999999999999999999999999986 467999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHH
Q psy9757 534 PLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESV 613 (659)
Q Consensus 534 pL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~iv 613 (659)
|||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++..+. |. ..+..+.+|++++ ++.+++
T Consensus 107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~---~n~ei~ 178 (300)
T PHA02884 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DN---EISNFYKHPKKIL---INFDIL 178 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC---cccccccChhhhh---ccHHHH
Confidence 999999999999999999999999999999999999999988888776554 32 2456677888865 478999
Q ss_pred HHHHHCCC
Q psy9757 614 RYLLSQHV 621 (659)
Q Consensus 614 k~LL~~Ga 621 (659)
++|+++++
T Consensus 179 ~~Lish~v 186 (300)
T PHA02884 179 KILVSHFI 186 (300)
T ss_pred HHHHHHHH
Confidence 99998877
No 67
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83 E-value=1.2e-19 Score=188.03 Aligned_cols=155 Identities=20% Similarity=0.132 Sum_probs=135.0
Q ss_pred ccCCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCCCccC----CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCC
Q psy9757 492 SMTDFDRRN-ILHTACSVGKLDIVKYCLENGVSVHIRD----NYDISPLHEAVIADQHDIIRLLRHCGAHLTNE-PMFLG 565 (659)
Q Consensus 492 n~~d~~g~T-pLh~Aa~~g~~~iv~~LL~~gadin~~d----~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~-~~~g~ 565 (659)
..+|..|+| +||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..++.+++++|+++|++++.. +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 345666665 5677777799999999999999999874 58999999999999999999999999999986 46799
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHH
Q psy9757 566 DVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDI 645 (659)
Q Consensus 566 t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ei 645 (659)
||||.|+..++.+++++|++.|++++.+|..|+||||+|+..++.+++.++... . .+..+.+|++++ ++.++
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~---~n~ei 177 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN--E---ISNFYKHPKKIL---INFDI 177 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC--c---ccccccChhhhh---ccHHH
Confidence 999999999999999999999999999999999999999999999988766532 2 456677888875 46899
Q ss_pred HHHHHhCCC
Q psy9757 646 IELLKSSET 654 (659)
Q Consensus 646 v~~Ll~~ga 654 (659)
+++|++++.
T Consensus 178 ~~~Lish~v 186 (300)
T PHA02884 178 LKILVSHFI 186 (300)
T ss_pred HHHHHHHHH
Confidence 999998876
No 68
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=7.2e-20 Score=176.03 Aligned_cols=131 Identities=20% Similarity=0.226 Sum_probs=100.1
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHH------CCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCC
Q psy9757 492 SMTDFDRRNILHTACSVGKLDIVKYCLE------NGVSVHIRDNYDISPLHEAVIADQ----HDIIRLLRHCGAHLTNEP 561 (659)
Q Consensus 492 n~~d~~g~TpLh~Aa~~g~~~iv~~LL~------~gadin~~d~~g~TpL~~Aa~~g~----~eivklLl~~ga~~~~~~ 561 (659)
+.++..|.||||+|++.|+.+++++|++ .|++++.+|..|.||||+|+..|+ .+++++|+++|++++.++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 4556778888888888888888888753 257788888888888888888887 477777777787777776
Q ss_pred C-CCCcHHHHHHHcCCHHHHHHHHH-cCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 562 M-FLGDVLTNAAARGMIKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 562 ~-~g~t~L~~Aa~~g~~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
. .|+||||+|+..++.+++++|+. .|++++..|.+|+||||+|+..++.+++++|+++++.
T Consensus 95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4 77777777777777777777776 4777777777777777777777777777777776544
No 69
>PHA02741 hypothetical protein; Provisional
Probab=99.82 E-value=9.4e-20 Score=175.24 Aligned_cols=131 Identities=19% Similarity=0.193 Sum_probs=121.2
Q ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCcccCC
Q psy9757 525 HIRDNYDISPLHEAVIADQHDIIRLLRH------CGAHLTNEPMFLGDVLTNAAARGM----IKRLQSYLLAGINLNQVD 594 (659)
Q Consensus 525 n~~d~~g~TpL~~Aa~~g~~eivklLl~------~ga~~~~~~~~g~t~L~~Aa~~g~----~~~v~~Ll~~gad~n~~d 594 (659)
+.++..|.||||+|++.|+.+++++|++ .|++++.+|..|+||||+|+..|+ .+++++|++.|+++|.++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 4567899999999999999999998854 368899999999999999999998 589999999999999998
Q ss_pred C-CCChHHHHHHHcCCHHHHHHHHH-CCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 595 S-IGLTPLHAAVLNNNIESVRYLLS-QHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 595 ~-~g~TpLh~Aa~~g~~~ivk~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
. .|+||||+|+.+++.+++++|++ .|++++.+|..|.||||+|...++.+++++|++.++.
T Consensus 95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5 89999999999999999999998 5999999999999999999999999999999987654
No 70
>KOG0507|consensus
Probab=99.81 E-value=9.4e-20 Score=198.82 Aligned_cols=190 Identities=18% Similarity=0.164 Sum_probs=174.4
Q ss_pred HHHHHHcCCHHHHHHHHhcC-------------CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYG-------------ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPL 535 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~g-------------a~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL 535 (659)
+..|++.|+.+.+..|+++. .+.|.+|.+|.|+||.||.+|+.+++++|++..+-++..|..|.+||
T Consensus 7 l~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~pl 86 (854)
T KOG0507|consen 7 LIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPL 86 (854)
T ss_pred HHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceE
Confidence 55699999999999999741 24678899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHH
Q psy9757 536 HEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRY 615 (659)
Q Consensus 536 ~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~ 615 (659)
|+|+..|+.|++++|+.++..+|..+..+.||||.|+++|+.+++.+|+.+|++.-.+|..+.|+|.+|++.|..+++++
T Consensus 87 hlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ 166 (854)
T KOG0507|consen 87 HLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQM 166 (854)
T ss_pred EehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCC--------CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 616 LLSQHVDL--------TIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 616 LL~~Gad~--------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
|++...+. ..++..+.+|||+|+++||.++++.|++.|.+.+.
T Consensus 167 ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~ 217 (854)
T KOG0507|consen 167 LLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINY 217 (854)
T ss_pred HhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccc
Confidence 99763222 24566789999999999999999999999998764
No 71
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=1.2e-19 Score=171.64 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=54.3
Q ss_pred CCCCCcHHHHHHHcCCH---HHHHHHHHcCCCcccCC-CCCChHHHHHHHcCCHHHHHHHHH-CCCCCCCcccCCCcHHH
Q psy9757 561 PMFLGDVLTNAAARGMI---KRLQSYLLAGINLNQVD-SIGLTPLHAAVLNNNIESVRYLLS-QHVDLTIENKNGQSAIE 635 (659)
Q Consensus 561 ~~~g~t~L~~Aa~~g~~---~~v~~Ll~~gad~n~~d-~~g~TpLh~Aa~~g~~~ivk~LL~-~Gad~~~~d~~G~TpL~ 635 (659)
+..|.||||+|+..|+. +++++|++.|+++|.++ ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 33444444444444433 23455555555555555 256666666666666666666665 35666666666666666
Q ss_pred HHHHcCcHHHHHHHHhCCCCCC
Q psy9757 636 VANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 636 ~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+|+..|+.+++++|+++|++.+
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 132 VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHcCCHHHHHHHHHcCCCCC
Confidence 6666666666666666666554
No 72
>KOG0505|consensus
Probab=99.81 E-value=8.8e-20 Score=193.25 Aligned_cols=178 Identities=25% Similarity=0.315 Sum_probs=157.2
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
+..+-|.||.+|.-.+.++|++|+++|+++|..|..|+||||.|+..||..++++|+++|+++-..+.+|..|+..+...
T Consensus 70 n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~e 149 (527)
T KOG0505|consen 70 NVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDE 149 (527)
T ss_pred CCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCc
Confidence 34456889999999999999999999999999999999999999999999999999999999888887777765433211
Q ss_pred -------------CC-------------HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCC
Q psy9757 542 -------------DQ-------------HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDS 595 (659)
Q Consensus 542 -------------g~-------------~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~ 595 (659)
|- +.-++..+..|...+..+..|.|.||.|+.+|+.++.++|++.|.+++.+|.
T Consensus 150 a~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~ 229 (527)
T KOG0505|consen 150 ATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDY 229 (527)
T ss_pred chhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccc
Confidence 10 1223444558888888888899999999999999999999999999999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHH
Q psy9757 596 IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQ 639 (659)
Q Consensus 596 ~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~ 639 (659)
+||||||.|+.-|..+++++|+++|++.+.....|.||+++|..
T Consensus 230 dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 230 DGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred cCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 99999999999999999999999999999999999999999865
No 73
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.80 E-value=1.5e-19 Score=171.06 Aligned_cols=132 Identities=18% Similarity=0.186 Sum_probs=110.6
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC--C-----CCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCC
Q psy9757 491 ISMTDFDRRNILHTACSVGKLDIVKYCLENGV--S-----VHIRDNYDISPLHEAVIADQH---DIIRLLRHCGAHLTNE 560 (659)
Q Consensus 491 vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~ga--d-----in~~d~~g~TpL~~Aa~~g~~---eivklLl~~ga~~~~~ 560 (659)
.+..|.+|.||||+|++.|+. +.+++..+. + ++.+|..|.||||+|+..|+. +++++|+++|++++.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~ 87 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK 87 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence 355677899999999999983 344333222 2 334688899999999999887 4688999999999998
Q ss_pred C-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 561 P-MFLGDVLTNAAARGMIKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 561 ~-~~g~t~L~~Aa~~g~~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+ ..|+||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+++|++.+
T Consensus 88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 7 489999999999999999999997 589999999999999999999999999999999998875
No 74
>KOG0512|consensus
Probab=99.77 E-value=3.9e-18 Score=156.04 Aligned_cols=141 Identities=23% Similarity=0.228 Sum_probs=111.6
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCC-cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHH
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGAD-ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDI 546 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~-vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ei 546 (659)
++.+|+..+.+..|+.||+..++ +|.+|.+|+||||-|+.+|+.+||+.|+..|++++.+...|+||||-||..++.++
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v 145 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV 145 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence 45678888888888888886654 78889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHH-cCCCcccCCCCCChHHHHHHHcC
Q psy9757 547 IRLLRHCGAHLTNEPMFLGDVLTNAAARGM-IKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNN 608 (659)
Q Consensus 547 vklLl~~ga~~~~~~~~g~t~L~~Aa~~g~-~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g 608 (659)
+..|+.+|+++|+......||||+|+...+ ...+.+|+. .++++..++..+.||+.+|-+.+
T Consensus 146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 999999998888888888888888886654 334444443 45566666666667766665543
No 75
>KOG0512|consensus
Probab=99.75 E-value=8.9e-18 Score=153.67 Aligned_cols=143 Identities=24% Similarity=0.285 Sum_probs=130.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy9757 500 NILHTACSVGKLDIVKYCLENGVS-VHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIK 578 (659)
Q Consensus 500 TpLh~Aa~~g~~~iv~~LL~~gad-in~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~ 578 (659)
--+.+|+..+.+..|+.||+..++ +|.+|.+|+||||.|+.+||.+|++.|+..|++++.+...|+||||.||.-++.+
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence 357789999999999999988776 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCChHHHHHHHcCCH-HHHHHHH-HCCCCCCCcccCCCcHHHHHHHcCc
Q psy9757 579 RLQSYLLAGINLNQVDSIGLTPLHAAVLNNNI-ESVRYLL-SQHVDLTIENKNGQSAIEVANQMQL 642 (659)
Q Consensus 579 ~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~-~ivk~LL-~~Gad~~~~d~~G~TpL~~A~~~g~ 642 (659)
++.+||++|+|+|.......||||+||...+. ..+++|+ ..++++..++..+.||+.+|.+.+.
T Consensus 145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 145 VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 99999999999999999999999999988764 4566665 5689999999999999999988753
No 76
>KOG0195|consensus
Probab=99.72 E-value=4.6e-18 Score=166.67 Aligned_cols=131 Identities=25% Similarity=0.305 Sum_probs=94.0
Q ss_pred HcCCHHHHHH-HHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Q psy9757 474 REGDIDKIKE-MQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRH 552 (659)
Q Consensus 474 ~~g~~~iv~~-Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~ 552 (659)
+.|+.--|++ |-+..-+.|.-|..|.+|||+||+.|+..+++.||.+|+.+|..+...-||||+|+..||.++|+.|++
T Consensus 9 regna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~ 88 (448)
T KOG0195|consen 9 REGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLS 88 (448)
T ss_pred hcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHH
Confidence 3444333333 333455667777777777777777777777777777777777777767777777777777777777777
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHH
Q psy9757 553 CGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAA 604 (659)
Q Consensus 553 ~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~A 604 (659)
..+|+|+.+..|+||||+||.-|+-.+++-|+..|+.++..+++|.|||..|
T Consensus 89 ~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 89 RKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 7777777777777777777777777777777777777777777777777765
No 77
>KOG3676|consensus
Probab=99.71 E-value=5.7e-17 Score=179.66 Aligned_cols=185 Identities=21% Similarity=0.254 Sum_probs=153.5
Q ss_pred HHHHHHHcCCHHHHHHHHhcC---------CCcccCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCC----CCc-cCCC
Q psy9757 468 LFQSAVREGDIDKIKEMQNYG---------ADISMTDFDRRNILHTACSV---GKLDIVKYCLENGVS----VHI-RDNY 530 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~g---------a~vn~~d~~g~TpLh~Aa~~---g~~~iv~~LL~~gad----in~-~d~~ 530 (659)
.+..|...+.++.+..|+..+ -+++.+...|.|.||.|..+ ++.++++.||+.-.. +.. ...+
T Consensus 104 ~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~ 183 (782)
T KOG3676|consen 104 ALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYY 183 (782)
T ss_pred hhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhc
Confidence 345566777777777666544 34566667899999999874 456888888876322 222 2346
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-----------------------CCCCCcHHHHHHHcCCHHHHHHHHHcC
Q psy9757 531 DISPLHEAVIADQHDIIRLLRHCGAHLTNE-----------------------PMFLGDVLTNAAARGMIKRLQSYLLAG 587 (659)
Q Consensus 531 g~TpL~~Aa~~g~~eivklLl~~ga~~~~~-----------------------~~~g~t~L~~Aa~~g~~~~v~~Ll~~g 587 (659)
|.||||+|+.+.+.++|++|++.|||++++ -..|..||.+||..++.+++++|+++|
T Consensus 184 GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~g 263 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHG 263 (782)
T ss_pred CcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcC
Confidence 899999999999999999999999998621 124678999999999999999999999
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CCCcccCCCcHHHHHHHcCcHHHHHHHHhC
Q psy9757 588 INLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD--LTIENKNGQSAIEVANQMQLNDIIELLKSS 652 (659)
Q Consensus 588 ad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad--~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ 652 (659)
+|++.+|..|+|.||+.+.+-..++.++++++|++ ...+|+.|.|||.+|++.|+.+|.+.+++.
T Consensus 264 Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 264 ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999999999999999999999 889999999999999999999999999987
No 78
>KOG4369|consensus
Probab=99.69 E-value=1.7e-17 Score=185.28 Aligned_cols=191 Identities=22% Similarity=0.270 Sum_probs=130.4
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMT-DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~-d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
++|.+|+-.||..+|+.|+.+.++++.+ |+.+.|+|.+||..|..++|++||..|++-..++...+|||.+|...|..+
T Consensus 792 ~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~ 871 (2131)
T KOG4369|consen 792 VPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTK 871 (2131)
T ss_pred hhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHH
Confidence 3445566666666666666666666544 455666666666666666666666666666666666666777766666677
Q ss_pred HHHHHHHcCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC-CCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 546 IIRLLRHCGAHLTNEP--MFLGDVLTNAAARGMIKRLQSYLLAGINLNQV-DSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 546 ivklLl~~ga~~~~~~--~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~-d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
+|++|+.+|+.+|.+. ..|-.||+.|..+|+.+.++.|++.|.|+|.. ..+-+|+|-+|+..|+.+++.+||.+.++
T Consensus 872 iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~an 951 (2131)
T KOG4369|consen 872 IIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQAN 951 (2131)
T ss_pred HHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhh
Confidence 7777777766666442 34566777777777777777777777666653 34556777777777777777777777777
Q ss_pred CCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 623 LTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 623 ~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+..+-+.|.|||+-++..|+.++-++|+..|++.+
T Consensus 952 vehRaktgltplme~AsgGyvdvg~~li~~gad~n 986 (2131)
T KOG4369|consen 952 VEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTN 986 (2131)
T ss_pred hhhhcccCCcccchhhcCCccccchhhhhcccccc
Confidence 77777778888888888888888888888887754
No 79
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.69 E-value=1.7e-16 Score=135.39 Aligned_cols=89 Identities=31% Similarity=0.490 Sum_probs=74.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivk 548 (659)
||+|++.|+.+++++|++++.+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 5788888888888888888877776 788888888888888888888888888888888888888888888888888
Q ss_pred HHHHcCCCCCCCC
Q psy9757 549 LLRHCGAHLTNEP 561 (659)
Q Consensus 549 lLl~~ga~~~~~~ 561 (659)
+|+++|++++.+|
T Consensus 77 ~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEHGADVNIRN 89 (89)
T ss_dssp HHHHTTT-TTSS-
T ss_pred HHHHcCCCCCCcC
Confidence 8888888887654
No 80
>KOG0195|consensus
Probab=99.69 E-value=3.2e-17 Score=160.82 Aligned_cols=109 Identities=24% Similarity=0.228 Sum_probs=62.3
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 463 ILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
..+-+|||+||+.|+..+++.|+..|+.+|..+....||||+|+.+||-++|+.||+..+|+|..+..|.|||||||..|
T Consensus 32 dhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwg 111 (448)
T KOG0195|consen 32 DHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWG 111 (448)
T ss_pred ccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhc
Confidence 33444555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q psy9757 543 QHDIIRLLRHCGAHLTNEPMFLGDVLTNA 571 (659)
Q Consensus 543 ~~eivklLl~~ga~~~~~~~~g~t~L~~A 571 (659)
...+++-|+.+|+.++..+..|.|||..|
T Consensus 112 ydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 112 YDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHHHHHHHHhccceeeecccCCCCchhhh
Confidence 55555555555555555555555555443
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.67 E-value=1.5e-15 Score=136.18 Aligned_cols=122 Identities=37% Similarity=0.467 Sum_probs=66.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q psy9757 495 DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR 574 (659)
Q Consensus 495 d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~ 574 (659)
+.+|.||||+|+..++.+++++|++.+.+.+..+..|.||||.|+..++.+++++|++++++++..+..+.||+|+|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 34556666666666666666666666655555555566666666666666666666555554444444444555555555
Q ss_pred CCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 575 GMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 575 g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
++.+++++|++.+.+.+..+..+.|||++|...++.+++++|
T Consensus 84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 555555555444444444444444444444444444444444
No 82
>KOG4369|consensus
Probab=99.67 E-value=5.8e-17 Score=181.11 Aligned_cols=206 Identities=18% Similarity=0.205 Sum_probs=146.6
Q ss_pred ChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC--CC
Q psy9757 453 GRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD--NY 530 (659)
Q Consensus 453 ~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d--~~ 530 (659)
...++....+....++|-+||..|..++|++||..|++-..++...+|||.+|...|..++++.||..|..||.+. +.
T Consensus 812 ~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSkl 891 (2131)
T KOG4369|consen 812 AHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKL 891 (2131)
T ss_pred hhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccccccc
Confidence 3445555555566667777777777777777777777777777777777777777777777777777777776654 45
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC
Q psy9757 531 DISPLHEAVIADQHDIIRLLRHCGAHLTNEP-MFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609 (659)
Q Consensus 531 g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~ 609 (659)
|.+||++|..+||.+.++.|++.|.++|... .+.+|+|-+|+..|+.+++.+||.+.+++..+-..|-|||+-++..|.
T Consensus 892 gisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGy 971 (2131)
T KOG4369|consen 892 GISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGY 971 (2131)
T ss_pred CcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCc
Confidence 6677777777777777777777777777543 356677777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHCCCCCCCcc--cCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 610 IESVRYLLSQHVDLTIEN--KNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 610 ~~ivk~LL~~Gad~~~~d--~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+++-++||.+|+|.|.-- ..-.|+|-+++..||...+++|++..+-.+|
T Consensus 972 vdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v 1022 (2131)
T KOG4369|consen 972 VDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRV 1022 (2131)
T ss_pred cccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceec
Confidence 777777777777776521 2234677777777777777777776655443
No 83
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.66 E-value=2.1e-15 Score=135.10 Aligned_cols=125 Identities=28% Similarity=0.404 Sum_probs=119.5
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHH
Q psy9757 526 IRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 526 ~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa 605 (659)
.+|..|.||||+|+..++.+++++|++.+.+.+..+..|.++||.|+..++.+++++|++.|++++..+..+.||+|+|+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA 81 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 35678999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 606 LNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 606 ~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
..++.+++++|+++|.+.+..+..|.||+++|...++.+++++|+
T Consensus 82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 999999999999999999999999999999999999999999884
No 84
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66 E-value=6.8e-16 Score=131.68 Aligned_cols=88 Identities=32% Similarity=0.413 Sum_probs=43.3
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
||+|++.|+.+++++|++.+.+++. |.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 3444444444444444444444433 444444444444445555555555555555555555555555555555555
Q ss_pred HHHHCCCCCCCc
Q psy9757 615 YLLSQHVDLTIE 626 (659)
Q Consensus 615 ~LL~~Gad~~~~ 626 (659)
+|+++|++++.+
T Consensus 77 ~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 77 LLLEHGADVNIR 88 (89)
T ss_dssp HHHHTTT-TTSS
T ss_pred HHHHcCCCCCCc
Confidence 555555555544
No 85
>KOG3676|consensus
Probab=99.60 E-value=1.2e-14 Score=161.32 Aligned_cols=158 Identities=23% Similarity=0.257 Sum_probs=138.9
Q ss_pred ccCCcHHHHHHHH---cCCHHHHHHHHhcCCCc-c----cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcc------
Q psy9757 462 KILYPALFQSAVR---EGDIDKIKEMQNYGADI-S----MTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIR------ 527 (659)
Q Consensus 462 ~~~~~t~L~~Aa~---~g~~~iv~~Ll~~ga~v-n----~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~------ 527 (659)
...+.|+||.|.- .++-++++.|++.-..+ | ...+.|.||||.|+.+.+.++|++|++.|||++.+
T Consensus 140 Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF 219 (782)
T KOG3676|consen 140 GATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFF 219 (782)
T ss_pred cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcccc
Confidence 4457789998877 34558999999854321 1 12367999999999999999999999999999762
Q ss_pred ---C--------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-
Q psy9757 528 ---D--------------NYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGIN- 589 (659)
Q Consensus 528 ---d--------------~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad- 589 (659)
| ..|..||.+||..++.||+++|+++|||++.+|..|+|.||..+.+-..++..++++.|++
T Consensus 220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~ 299 (782)
T KOG3676|consen 220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA 299 (782)
T ss_pred CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 1 1478999999999999999999999999999999999999999999999999999999999
Q ss_pred -cccCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 590 -LNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 590 -~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
...+|.+|-|||.+|++.|+.++.+.+++.
T Consensus 300 l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 300 LEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 888999999999999999999999999987
No 86
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.53 E-value=3.2e-13 Score=133.76 Aligned_cols=129 Identities=33% Similarity=0.361 Sum_probs=106.1
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC-----HHHHHHHHHcCC---CCCCCCCC
Q psy9757 492 SMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ-----HDIIRLLRHCGA---HLTNEPMF 563 (659)
Q Consensus 492 n~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~-----~eivklLl~~ga---~~~~~~~~ 563 (659)
...+..+.+++|.++..+..+++++|+..|++++.++..|.||||+|+..++ .+++++|++.|+ ..+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 4445567888888888888888888888888888888888899999888888 888888888888 45555778
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 564 LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 564 g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
|.||||+|+..|+.+++++|++.|++++..+..|.|+++.|+..++.++++.+++.+
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 888888888888888888888888888888888888888888888888888888754
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.50 E-value=6.7e-13 Score=131.49 Aligned_cols=131 Identities=30% Similarity=0.311 Sum_probs=123.7
Q ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CcccCC
Q psy9757 523 SVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM-----IKRLQSYLLAGI---NLNQVD 594 (659)
Q Consensus 523 din~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~-----~~~v~~Ll~~ga---d~n~~d 594 (659)
.....+..+.++++.++..+..+++++|+..|++++..+..|.|+||+|+..++ .+++++|++.|+ ..+.+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~ 144 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD 144 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence 345566778999999999999999999999999999999999999999999999 999999999999 666779
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
..|+||||+|+..|+.+++++|++.|++++.++..|.|++++|+..++.+++++++..+
T Consensus 145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999865
No 88
>KOG4214|consensus
Probab=99.50 E-value=7.4e-14 Score=115.17 Aligned_cols=99 Identities=28% Similarity=0.439 Sum_probs=88.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivk 548 (659)
+.+++++|.++-|+..+..|.++|..- .|++|||+|+-.|+.++++||+..|++++.+|++|.|||-.|+..||.+||+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVk 84 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVK 84 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHH
Confidence 457899999999999999998888764 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcHH
Q psy9757 549 LLRHCGAHLTNEPMFLGDVL 568 (659)
Q Consensus 549 lLl~~ga~~~~~~~~g~t~L 568 (659)
+|+.+|++-..+.-+|.+.+
T Consensus 85 lLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 85 LLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHHcCcccceeCCCchhHH
Confidence 99999998776666665544
No 89
>KOG4214|consensus
Probab=99.42 E-value=4.1e-13 Score=110.83 Aligned_cols=102 Identities=25% Similarity=0.302 Sum_probs=71.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
+.|++++|..+-|+-.+..|-++|.. ..|++|||+|+..|..+++++|+..|++++.+|+.|-|||..|+..||.++|+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVk 84 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVK 84 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHH
Confidence 45666677777776666666655533 36677777777777777777777777777777777777777777777777777
Q ss_pred HHHHCCCCCCCcccCCCcHHHHH
Q psy9757 615 YLLSQHVDLTIENKNGQSAIEVA 637 (659)
Q Consensus 615 ~LL~~Gad~~~~d~~G~TpL~~A 637 (659)
+||++|++-.++--+|.+.++.+
T Consensus 85 lLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 85 LLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHcCcccceeCCCchhHHhhc
Confidence 77777777777777776666544
No 90
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.36 E-value=3.1e-12 Score=148.16 Aligned_cols=106 Identities=24% Similarity=0.317 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDI 546 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ei 546 (659)
..|+.|+..|+.+.++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc-------CCCCCCCCCCCCcHHHHHH
Q psy9757 547 IRLLRHC-------GAHLTNEPMFLGDVLTNAA 572 (659)
Q Consensus 547 vklLl~~-------ga~~~~~~~~g~t~L~~Aa 572 (659)
+++|+++ |++.+..+..|.+++..+.
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999 8888877777777665443
No 91
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.33 E-value=5.7e-12 Score=145.94 Aligned_cols=101 Identities=22% Similarity=0.154 Sum_probs=52.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
|+.|+..|+.+++++|+++|+++|..|..|.||||+|+.+|+.+++++|+++|+++|.+|..|+||||+|+.+|+.++++
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~ 165 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 44455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHC-------CCCCCCcccCCCcHHH
Q psy9757 615 YLLSQ-------HVDLTIENKNGQSAIE 635 (659)
Q Consensus 615 ~LL~~-------Gad~~~~d~~G~TpL~ 635 (659)
+|+++ |++.+..+..|.+|+.
T Consensus 166 ~Ll~~~~~~~~~ga~~~~~~~~g~~~~~ 193 (664)
T PTZ00322 166 LLSRHSQCHFELGANAKPDSFTGKPPSL 193 (664)
T ss_pred HHHhCCCcccccCCCCCccccCCCCccc
Confidence 55554 4555444444444443
No 92
>KOG0515|consensus
Probab=99.30 E-value=6.4e-12 Score=132.52 Aligned_cols=118 Identities=23% Similarity=0.275 Sum_probs=101.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHH
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDII 547 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eiv 547 (659)
+|.-|+..|.+++|+..+..--|+...+..|.|+||-|+-.||.+||+||++.|+++|..|.+||||||+|+.+++..++
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 46678999999999999988888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCC-CCCCcHHHHHH--HcCCHHHHHHHHH
Q psy9757 548 RLLRHCGAHLTNEP-MFLGDVLTNAA--ARGMIKRLQSYLL 585 (659)
Q Consensus 548 klLl~~ga~~~~~~-~~g~t~L~~Aa--~~g~~~~v~~Ll~ 585 (659)
+.|++.|+-+-+.. .++.|+..-+- +.|+..|.+||..
T Consensus 633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 99999998765443 35566654433 3578888888864
No 93
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.29 E-value=3e-12 Score=99.31 Aligned_cols=55 Identities=36% Similarity=0.486 Sum_probs=31.4
Q ss_pred HHHcC-CCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHH
Q psy9757 583 YLLAG-INLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVA 637 (659)
Q Consensus 583 Ll~~g-ad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A 637 (659)
|+++| +++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56677 78889999999999999999999999999999999999999999999987
No 94
>KOG0515|consensus
Probab=99.28 E-value=1e-11 Score=131.08 Aligned_cols=113 Identities=20% Similarity=0.182 Sum_probs=82.9
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHH
Q psy9757 538 AVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLL 617 (659)
Q Consensus 538 Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL 617 (659)
|+..|.+++|+-.+..--|+...+..|-|+||.|+..||.++|+||++.|+++|..|.+||||||+|+..++..+++.|+
T Consensus 557 aaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLV 636 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLV 636 (752)
T ss_pred hhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHH
Confidence 66667777777777776777777777777777777777777777777777788877788888888888877888888888
Q ss_pred HCCCCCCC-cccCCCcHHHHH--HHcCcHHHHHHHH
Q psy9757 618 SQHVDLTI-ENKNGQSAIEVA--NQMQLNDIIELLK 650 (659)
Q Consensus 618 ~~Gad~~~-~d~~G~TpL~~A--~~~g~~eiv~~Ll 650 (659)
+.|+-+.. +-.++.|+.+-. .+.|+..|.+||.
T Consensus 637 e~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 637 ESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred hccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 77776644 334566776654 3456777777774
No 95
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.28 E-value=3.3e-12 Score=99.04 Aligned_cols=55 Identities=31% Similarity=0.450 Sum_probs=28.2
Q ss_pred HHhcC-CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Q psy9757 484 MQNYG-ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEA 538 (659)
Q Consensus 484 Ll~~g-a~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~A 538 (659)
|+++| ++++.+|..|+||||+||..|+.+++++|++.|++++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56666 77788888888888888888888888888888888888888888888876
No 96
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27 E-value=9.4e-12 Score=95.74 Aligned_cols=54 Identities=37% Similarity=0.543 Sum_probs=38.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLR 551 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl 551 (659)
|+||||+|++.|+.+++++|+++|+++|.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 577888888888888888888888888888888888888888888888888775
No 97
>KOG1710|consensus
Probab=99.26 E-value=3.3e-11 Score=118.90 Aligned_cols=119 Identities=24% Similarity=0.199 Sum_probs=101.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTN-EPMFLGDVLTNAAARGM 576 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~-~~~~g~t~L~~Aa~~g~ 576 (659)
-..||.-+...|..+-...||+.--++|.+|..|.|+|..|+..|+.+++++|++.|+|+|. ++..++||||+|+..|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 45788888888888888888887667888999999999999999999999999999999885 45577888888888888
Q ss_pred HHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 577 IKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
.+++.+|++.|+.+...|.-|+|+-.+|+.-|+.++|..+
T Consensus 92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII 131 (396)
T ss_pred chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence 8888888888888888888888888888888888888765
No 98
>KOG1710|consensus
Probab=99.25 E-value=3.7e-11 Score=118.57 Aligned_cols=117 Identities=21% Similarity=0.204 Sum_probs=109.8
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHcCCHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHI-RDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~-~d~~g~TpL~~Aa~~g~~e 545 (659)
.+|..++..|+.+-...|++.--++|..|..|.++|..|+..|+.++|++||+.|+|+|. ++..++||||+|+.+|+.+
T Consensus 14 ~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~d 93 (396)
T KOG1710|consen 14 SPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQD 93 (396)
T ss_pred hHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCch
Confidence 567789999999999999997667899999999999999999999999999999999986 4678999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy9757 546 IIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSY 583 (659)
Q Consensus 546 ivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~L 583 (659)
+.++|++.|+.+...|..|+|+-..|+.-|+.+++..+
T Consensus 94 vcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 94 VCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII 131 (396)
T ss_pred HHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence 99999999999999999999999999999999999876
No 99
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=2.1e-11 Score=93.84 Aligned_cols=54 Identities=31% Similarity=0.514 Sum_probs=36.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 597 GLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 597 g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
|+||||+|++.|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567777777777777777777777777777777777777777777777777764
No 100
>KOG0506|consensus
Probab=98.70 E-value=1.4e-08 Score=106.64 Aligned_cols=92 Identities=24% Similarity=0.391 Sum_probs=81.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCCcccCCCcHHHHHHHcC
Q psy9757 563 FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ-HVDLTIENKNGQSAIEVANQMQ 641 (659)
Q Consensus 563 ~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~-Gad~~~~d~~G~TpL~~A~~~g 641 (659)
+..-.+.+|+..|++..++.+.-.|.|++.+|.+.+|+||.|+..|+.+++|+|++. +.+++.+|.+|+|||+-|...+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~ 584 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK 584 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence 445678899999999999999999999999999999999999999999999999975 8889999999999999999999
Q ss_pred cHHHHHHHHhCCC
Q psy9757 642 LNDIIELLKSSET 654 (659)
Q Consensus 642 ~~eiv~~Ll~~ga 654 (659)
|.+++++|.+...
T Consensus 585 h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 585 HKEVVKLLEEAQY 597 (622)
T ss_pred cHHHHHHHHHHhc
Confidence 9999999876543
No 101
>KOG0506|consensus
Probab=98.69 E-value=1.7e-08 Score=106.04 Aligned_cols=88 Identities=25% Similarity=0.498 Sum_probs=81.7
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHH
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDI 546 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~ei 546 (659)
.+.+|++.|++..++.+.-.|.|++.+|++.+|+||.|+..|++++++||++. +.+++.+|.+|+|||.-|...+|.++
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v 588 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV 588 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence 46679999999999999999999999999999999999999999999999986 89999999999999999999999999
Q ss_pred HHHHHHcCC
Q psy9757 547 IRLLRHCGA 555 (659)
Q Consensus 547 vklLl~~ga 555 (659)
+++|-+.--
T Consensus 589 ~k~L~~~~~ 597 (622)
T KOG0506|consen 589 VKLLEEAQY 597 (622)
T ss_pred HHHHHHHhc
Confidence 999987643
No 102
>KOG0783|consensus
Probab=98.58 E-value=2.5e-08 Score=110.64 Aligned_cols=82 Identities=24% Similarity=0.269 Sum_probs=48.0
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q psy9757 492 SMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDN-YDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTN 570 (659)
Q Consensus 492 n~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~-~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~ 570 (659)
|.+|..|+|+||+|+..+..+++++||++|++++.+|. .|+||||.|+.+|+.+|+-+|+++|+.+..+|..|.+||..
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQF 125 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHH
Confidence 44555566666666666666666666666666655554 35566666666666666666666665555556666666555
Q ss_pred HHH
Q psy9757 571 AAA 573 (659)
Q Consensus 571 Aa~ 573 (659)
-++
T Consensus 126 ~~r 128 (1267)
T KOG0783|consen 126 LSR 128 (1267)
T ss_pred Hhh
Confidence 444
No 103
>KOG0818|consensus
Probab=98.57 E-value=1.9e-07 Score=98.60 Aligned_cols=85 Identities=22% Similarity=0.262 Sum_probs=63.0
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccCCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHH
Q psy9757 567 VLTNAAARGMIKRLQSYLLAGINLNQVDS-IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDI 645 (659)
Q Consensus 567 ~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~-~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ei 645 (659)
.||..++.|+.+.+-.|+..|+++|..+. .|.||||+|++.|+..-+++|+-+|+|+...|.+|.||+.||...||.++
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l 215 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL 215 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence 46777777777777777777777776553 57777777777777777777777777777777777777777777777777
Q ss_pred HHHHHh
Q psy9757 646 IELLKS 651 (659)
Q Consensus 646 v~~Ll~ 651 (659)
.+-|.+
T Consensus 216 aeRl~e 221 (669)
T KOG0818|consen 216 AERLVE 221 (669)
T ss_pred HHHHHH
Confidence 666543
No 104
>KOG0818|consensus
Probab=98.53 E-value=3.1e-07 Score=97.07 Aligned_cols=86 Identities=19% Similarity=0.290 Sum_probs=79.8
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMTDF-DRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~-~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.-||..++.|+++..--|+..|+++|..+. .|.||||.|++.|+..-+++|+-+|+|++..|..|+||+.+|-..||.+
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence 358999999999999999999999998764 5999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy9757 546 IIRLLRH 552 (659)
Q Consensus 546 ivklLl~ 552 (659)
+.+-|++
T Consensus 215 laeRl~e 221 (669)
T KOG0818|consen 215 LAERLVE 221 (669)
T ss_pred HHHHHHH
Confidence 8877766
No 105
>KOG0783|consensus
Probab=98.52 E-value=4.8e-08 Score=108.52 Aligned_cols=83 Identities=27% Similarity=0.286 Sum_probs=58.0
Q ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHH
Q psy9757 524 VHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPM-FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLH 602 (659)
Q Consensus 524 in~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh 602 (659)
.|.+|..|+|+||+|+..+..++++||+.+|++++.+|. .|+||||.|+..|+++++-.||.+|..+..+|.+|..||.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq 124 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQ 124 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHH
Confidence 466777777777777777777777777777777776664 5667777777777777777777777666667777777766
Q ss_pred HHHH
Q psy9757 603 AAVL 606 (659)
Q Consensus 603 ~Aa~ 606 (659)
.-++
T Consensus 125 ~~~r 128 (1267)
T KOG0783|consen 125 FLSR 128 (1267)
T ss_pred HHhh
Confidence 5443
No 106
>KOG0782|consensus
Probab=98.52 E-value=2.9e-07 Score=98.40 Aligned_cols=117 Identities=25% Similarity=0.193 Sum_probs=82.4
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHH
Q psy9757 502 LHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAH--LTNEPMFLGDVLTNAAARGMIKR 579 (659)
Q Consensus 502 Lh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~--~~~~~~~g~t~L~~Aa~~g~~~~ 579 (659)
|.-|+..+.+--++.+-.+|-++-.++.+..+.||+|+..|+-|+|++++++|.. ++..+..|.|+||.|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 4445555555445555556666666677777777777777777777777777653 44556677777777777777777
Q ss_pred HHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 580 LQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 580 v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
+++|++.|+.+...|..|.||-.-|-+.|..++..||-.
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence 777777777777777778888777777777777777754
No 107
>PF13606 Ank_3: Ankyrin repeat
Probab=98.48 E-value=1.8e-07 Score=62.45 Aligned_cols=29 Identities=45% Similarity=0.706 Sum_probs=21.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVH 525 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin 525 (659)
+|+||||+||+.|+.+++++||++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 36777777777777777777777777765
No 108
>KOG0782|consensus
Probab=98.46 E-value=5.1e-07 Score=96.52 Aligned_cols=119 Identities=23% Similarity=0.212 Sum_probs=104.6
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--cccCCCCCChHHHHHHHcCCHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGIN--LNQVDSIGLTPLHAAVLNNNIES 612 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad--~n~~d~~g~TpLh~Aa~~g~~~i 612 (659)
+..|+..+.+--+.-+..+|.++-.++.+..+.||+|+..|+-++++++|++|.. ++..|..|.|+||.|+..++..+
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v 949 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV 949 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence 3445556655555556667888888999999999999999999999999999863 56778899999999999999999
Q ss_pred HHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 613 VRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 613 vk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
.++|++.|+.+..+|..|.||-.-|.+.|..++..||.++.
T Consensus 950 c~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 950 CQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 99999999999999999999999999999999999998654
No 109
>KOG0705|consensus
Probab=98.43 E-value=5.2e-07 Score=97.05 Aligned_cols=89 Identities=24% Similarity=0.266 Sum_probs=79.6
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC--cc--cCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGAD--IS--MTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~--vn--~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
|..|+...++..+-+||.+|.. +| ..+.+|+|+||+||+.|++.+.++|+-+|+|+..+|..|+|+|.||-+.|..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq 707 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ 707 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence 5568889999999999999853 33 3356789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCC
Q psy9757 545 DIIRLLRHCGAHL 557 (659)
Q Consensus 545 eivklLl~~ga~~ 557 (659)
||+..|+.+|+..
T Consensus 708 ec~d~llq~gcp~ 720 (749)
T KOG0705|consen 708 ECIDVLLQYGCPD 720 (749)
T ss_pred HHHHHHHHcCCCc
Confidence 9999999999854
No 110
>PF13606 Ank_3: Ankyrin repeat
Probab=98.43 E-value=2.9e-07 Score=61.45 Aligned_cols=29 Identities=52% Similarity=0.723 Sum_probs=22.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 596 IGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 596 ~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+|+||||+|+++|+.+++++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 47778888888888888888888777775
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.41 E-value=3.7e-07 Score=62.41 Aligned_cols=33 Identities=42% Similarity=0.608 Sum_probs=25.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCC
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVHIRDN 529 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~ 529 (659)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 477888888888888888888888888777653
No 112
>KOG0705|consensus
Probab=98.38 E-value=8.7e-07 Score=95.36 Aligned_cols=95 Identities=24% Similarity=0.236 Sum_probs=83.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCc--c--cCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHH
Q psy9757 563 FLGDVLTNAAARGMIKRLQSYLLAGINL--N--QVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVAN 638 (659)
Q Consensus 563 ~g~t~L~~Aa~~g~~~~v~~Ll~~gad~--n--~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~ 638 (659)
.-...|..|....++..+-+||.+|... | ..+.+|+|+||+||..|++.+.++|+-+|+|+..+|..|+|+|.||.
T Consensus 623 ~lgqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 623 PLGQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 3345677888888999999999998643 2 34567899999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhCCCCCC
Q psy9757 639 QMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 639 ~~g~~eiv~~Ll~~ga~~~ 657 (659)
..|..+++..|+.+|..++
T Consensus 703 ~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hcccHHHHHHHHHcCCCcc
Confidence 9999999999999998764
No 113
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.38 E-value=4.9e-07 Score=61.81 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=27.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCCccc
Q psy9757 596 IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENK 628 (659)
Q Consensus 596 ~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~ 628 (659)
+|+||||+|+.+|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 478888888888888888888888888887763
No 114
>KOG0522|consensus
Probab=98.21 E-value=2.9e-06 Score=91.13 Aligned_cols=88 Identities=30% Similarity=0.360 Sum_probs=76.1
Q ss_pred cHHHHHHHHcCCHHHHHHHHh--cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 466 PALFQSAVREGDIDKIKEMQN--YGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~--~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
+.++|.++...+.+-+..++. ....++..|..|+||||+|+..|+.+.++.|+.+|+++..+|+.|++|||.|+..|+
T Consensus 21 p~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 21 PKPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred CcccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence 356899998888877666443 356788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc
Q psy9757 544 HDIIRLLRHC 553 (659)
Q Consensus 544 ~eivklLl~~ 553 (659)
.+++..++.+
T Consensus 101 ~q~i~~vlr~ 110 (560)
T KOG0522|consen 101 EQIITEVLRH 110 (560)
T ss_pred HHHHHHHHHH
Confidence 9888766654
No 115
>KOG0522|consensus
Probab=98.16 E-value=4.2e-06 Score=89.95 Aligned_cols=86 Identities=24% Similarity=0.290 Sum_probs=56.3
Q ss_pred HHHHHHHcCCHHHHHH-HH-HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHH
Q psy9757 534 PLHEAVIADQHDIIRL-LR-HCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIE 611 (659)
Q Consensus 534 pL~~Aa~~g~~eivkl-Ll-~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ 611 (659)
|||+++.....+-... |. +....++..|..|.||||+|+..|+.+.++.|+.+|+++..+|..||+|||-|+..|+..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 4777776655544433 22 224455666667777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHC
Q psy9757 612 SVRYLLSQ 619 (659)
Q Consensus 612 ivk~LL~~ 619 (659)
++..++.+
T Consensus 103 ~i~~vlr~ 110 (560)
T KOG0522|consen 103 IITEVLRH 110 (560)
T ss_pred HHHHHHHH
Confidence 66666543
No 116
>KOG3609|consensus
Probab=98.12 E-value=9.8e-06 Score=91.87 Aligned_cols=117 Identities=21% Similarity=0.122 Sum_probs=88.1
Q ss_pred HHHHHHcCCHHHHHHHHhcC----CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 469 FQSAVREGDIDKIKEMQNYG----ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~g----a~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
+..|+..|+...|+..++.. .++|..|.-|+++|+.|..+.+.+++++|++++... ..+|-+|+..|..
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v 101 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSV 101 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHH
Confidence 44699999999999988742 578899999999999999999999999999987654 3589999999999
Q ss_pred HHHHHHHHcCCCCCC----------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q psy9757 545 DIIRLLRHCGAHLTN----------EPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQ 592 (659)
Q Consensus 545 eivklLl~~ga~~~~----------~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~ 592 (659)
++|++++.+-..... .-..+-|||.+||..++.|+++.|+++|+.+..
T Consensus 102 ~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 102 PLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 999999987543311 112344666666666666666666666655543
No 117
>KOG0521|consensus
Probab=98.10 E-value=1.8e-06 Score=100.28 Aligned_cols=113 Identities=21% Similarity=0.184 Sum_probs=89.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC
Q psy9757 530 YDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609 (659)
Q Consensus 530 ~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~ 609 (659)
.+.+++..+...-+..++.++. .-..|.++||.|+..+..-.+++|+++|+++|..|..|+||||.+...|+
T Consensus 630 ~~~~~~~~~~~~~~~~~~n~~~--------~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~ 701 (785)
T KOG0521|consen 630 DGECLPRIATALAHGCCENWPV--------VLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGH 701 (785)
T ss_pred Cccchhhhhhhhcchhhhccch--------hhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcc
Confidence 4445555555444444443331 22357899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 610 IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 610 ~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
...+..|+++|++.++.+..|.+|+++|....+.+++-++.
T Consensus 702 ~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 702 TSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cchhhhhccccccccccCccCcchhhHHhhhccccHHHHHh
Confidence 99999999999999999999999999998777777765554
No 118
>KOG0511|consensus
Probab=98.00 E-value=1.3e-05 Score=82.56 Aligned_cols=82 Identities=27% Similarity=0.328 Sum_probs=63.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivk 548 (659)
|+.||+.|+.+.|++|++.|.++|..|.....||.+|+..||.++|++||++|+--..-.-+|.. .|+++.+. .+-+
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R-C~YgaLnd--~IR~ 116 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR-CHYGALND--RIRR 116 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch-hhhhhhhH--HHHH
Confidence 78999999999999999999999999999999999999999999999999999754332333433 35555443 3344
Q ss_pred HHHHc
Q psy9757 549 LLRHC 553 (659)
Q Consensus 549 lLl~~ 553 (659)
+|+.+
T Consensus 117 mllsy 121 (516)
T KOG0511|consen 117 MLLSY 121 (516)
T ss_pred HHHHH
Confidence 55543
No 119
>KOG2384|consensus
Probab=97.98 E-value=1.3e-05 Score=75.66 Aligned_cols=63 Identities=24% Similarity=0.354 Sum_probs=30.8
Q ss_pred CcccCCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCCCcccCCCcHHHHHHHcCcHHHHHHHHh
Q psy9757 589 NLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH-VDLTIENKNGQSAIEVANQMQLNDIIELLKS 651 (659)
Q Consensus 589 d~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~ 651 (659)
++|.+|..|||+|++|+..|+.+.+.+|+.+| +.+...|..|.+++.+|.+.|+.++++.|.+
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe 67 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFE 67 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHH
Confidence 44444444455555555555555555555444 4444444444445555544444444444443
No 120
>KOG0511|consensus
Probab=97.90 E-value=4e-05 Score=79.15 Aligned_cols=75 Identities=31% Similarity=0.454 Sum_probs=63.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q psy9757 499 RNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR 574 (659)
Q Consensus 499 ~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~ 574 (659)
.--|..||+.|.++.|++|++.|.++|.+|.+..+||.+|+.+||.+++|+|+++||-......+|..+ |+++-+
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 446899999999999999999999999999999999999999999999999999999766444455444 444444
No 121
>KOG3609|consensus
Probab=97.88 E-value=4.7e-05 Score=86.48 Aligned_cols=123 Identities=24% Similarity=0.257 Sum_probs=102.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCC----CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENG----VSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAA 572 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~g----adin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa 572 (659)
.+.--...|+..|+...|+..++.. .++|.+|.-|+++|+.|+.+.+.|++++|+++.... +.+|..|+
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI 96 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAI 96 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHH
Confidence 3445677899999999999988752 568889999999999999999999999999986544 67899999
Q ss_pred HcCCHHHHHHHHHcCCCcc----------cCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCc
Q psy9757 573 ARGMIKRLQSYLLAGINLN----------QVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIE 626 (659)
Q Consensus 573 ~~g~~~~v~~Ll~~gad~n----------~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~ 626 (659)
..|..++++.++.+..... ..-..+-|||.+||-.++.||+++|+++|+++...
T Consensus 97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 9999999999998643321 12235679999999999999999999999998554
No 122
>KOG2384|consensus
Probab=97.82 E-value=3.9e-05 Score=72.40 Aligned_cols=69 Identities=19% Similarity=0.181 Sum_probs=63.7
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy9757 488 GADISMTDFDRRNILHTACSVGKLDIVKYCLENG-VSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAH 556 (659)
Q Consensus 488 ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~g-adin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~ 556 (659)
+.++|.+|.-|+|||++|+..|+.+.+.||+++| +.+...|..|.+++.+|-+.|+.+.++.|.++..+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4688999999999999999999999999999999 89999999999999999999999999999987544
No 123
>KOG0520|consensus
Probab=97.81 E-value=3.6e-05 Score=89.14 Aligned_cols=124 Identities=19% Similarity=0.134 Sum_probs=96.1
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCCHHHHHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCL-ENGVSVHIRDNYDISPLHEAV 539 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL-~~gadin~~d~~g~TpL~~Aa 539 (659)
...+.+++|+++..++.-+++.+++- |......|.+|.-.+|+ |..++.+..-+|+ -.|..++.+|..|+||||||+
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence 34456889999999999999999885 76677778888888888 4455666665555 458889999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy9757 540 IADQHDIIRLLRHCGAHLTN------EPMFLGDVLTNAAARGMIKRLQSYLLA 586 (659)
Q Consensus 540 ~~g~~eivklLl~~ga~~~~------~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ 586 (659)
..|+..++..|++.|++.+. ..-.|.|+-..|..+|+..+..+|-+.
T Consensus 650 ~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 650 FRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 99999999999988876542 233577777777777777777777654
No 124
>KOG0521|consensus
Probab=97.76 E-value=3.3e-05 Score=89.93 Aligned_cols=88 Identities=24% Similarity=0.172 Sum_probs=74.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q psy9757 496 FDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARG 575 (659)
Q Consensus 496 ~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g 575 (659)
..|.|+||.|+..+..-++++||++|+++|..|..|.||||.+...|+...+.+|+++|++.++.+..+.++|++|....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence 46788999999999999999999999999999999999999999999999999998999998888888888988887665
Q ss_pred CHHHHHHH
Q psy9757 576 MIKRLQSY 583 (659)
Q Consensus 576 ~~~~v~~L 583 (659)
+.+.+-++
T Consensus 734 ~~d~~~l~ 741 (785)
T KOG0521|consen 734 NADIVLLL 741 (785)
T ss_pred cccHHHHH
Confidence 54444444
No 125
>KOG0520|consensus
Probab=97.68 E-value=4e-05 Score=88.79 Aligned_cols=127 Identities=20% Similarity=0.053 Sum_probs=88.4
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcHHH
Q psy9757 492 SMTDFDRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDIIRLLRH-CGAHLTNEPMFLGDVLT 569 (659)
Q Consensus 492 n~~d~~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~eivklLl~-~ga~~~~~~~~g~t~L~ 569 (659)
......|.|.||+++..++.-.++.+++. |......|.+|...+|+ |..++.+++.+|+. .|..++.+|..|+||||
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence 34455678888888888888888888875 55556666777777777 45566666665554 46777777777888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCcc------cCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 570 NAAARGMIKRLQSYLLAGINLN------QVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 570 ~Aa~~g~~~~v~~Ll~~gad~n------~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
+|+.+|+..++..|++.|++.+ .....|.|+-.+|..+|+..+.-+|-+.
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 8888887777777777665433 2334566776777777777666666655
No 126
>KOG2505|consensus
Probab=96.29 E-value=0.006 Score=65.67 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCCccc------CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHH
Q psy9757 577 IKRLQSYLLAGINLNQ------VDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQ 639 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~------~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~ 639 (659)
...+++|.+++++.|. .+..-.|+||+|+.+|..++|.+||+.|+|+..+|..|+||..++..
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence 3456666666555432 23345677888888888888888888888888888888888877763
No 127
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.06 E-value=0.011 Score=37.11 Aligned_cols=27 Identities=37% Similarity=0.634 Sum_probs=16.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSV 524 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadi 524 (659)
|.||||+|+..++.+++++|++.+.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666655544
No 128
>KOG2505|consensus
Probab=96.01 E-value=0.0099 Score=64.03 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=53.9
Q ss_pred CCHHHHHHHHhcCCCccc------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHH
Q psy9757 476 GDIDKIKEMQNYGADISM------TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAV 539 (659)
Q Consensus 476 g~~~iv~~Ll~~ga~vn~------~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa 539 (659)
.-...+.+|.+++.+.|. .++.-.|+||+|+.+|..++|.+||+.|+|+..+|..|.||..++.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 346788889888776543 2445679999999999999999999999999999999999999876
No 129
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.92 E-value=0.014 Score=36.59 Aligned_cols=27 Identities=48% Similarity=0.725 Sum_probs=16.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 597 GLTPLHAAVLNNNIESVRYLLSQHVDL 623 (659)
Q Consensus 597 g~TpLh~Aa~~g~~~ivk~LL~~Gad~ 623 (659)
|.||+|+|+..++.+++++|+++|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666665544
No 130
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.91 E-value=0.054 Score=51.58 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=36.5
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHh
Q psy9757 600 PLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKS 651 (659)
Q Consensus 600 pLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~ 651 (659)
-|.+|+..|-...+.-.+++|.+++. ++|..|++++|..|+.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 36788888888888888888887753 68888888888888888764
No 131
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.00 E-value=0.18 Score=48.11 Aligned_cols=140 Identities=23% Similarity=0.258 Sum_probs=97.7
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
...++..|++.+-+.+++..-+...+- -...++..-.||+..+.|+|+++-++ ....+ -.+-+..|....+.
T Consensus 46 ~~CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qn---L~i~~--~~~iFdIA~~~kDl 117 (192)
T PF03158_consen 46 MWCLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQN---LHIYN--PEDIFDIAFAKKDL 117 (192)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhc---cCCCC--chhhhhhhhhccch
Confidence 345777899999999999887754321 13457889999999999999999443 22211 23456778777777
Q ss_pred HHHH----HHHHcCCCCCCCCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 545 DIIR----LLRHCGAHLTNEPM--FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 545 eivk----lLl~~ga~~~~~~~--~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
++.. +++++...-...|. --..-|..|+.+|....+...+++|-+++. +.|..|+.+++..++.+++.
T Consensus 118 sLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 118 SLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred hHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 6632 34444222100100 011346789999999999999999987763 78999999999999998874
No 132
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.55 E-value=0.21 Score=49.09 Aligned_cols=118 Identities=21% Similarity=0.257 Sum_probs=79.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivk 548 (659)
|--|+..-+++-+.-++... .+-.++|-+|..++..+++-+|+.+ .+...+| .|.....+.-++
T Consensus 157 ledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~-f~ft~~d--------v~~~~~~~ydie 220 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSK-FNFTKQD--------VASMEKELYDIE 220 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhh-cceecch--------hhhcCcchhhHH
Confidence 56678878887777766532 1245788899988888999999875 2222222 222222344455
Q ss_pred HHHH-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC-Cccc---CCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 549 LLRH-CGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGI-NLNQ---VDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 549 lLl~-~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ga-d~n~---~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
+++. +|++ ..++++++.+|. ++|. +-+.|.|-|.-|.++++.+++.+||++|+-
T Consensus 221 Y~LS~h~a~--------------------~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 221 YLLSEHSAS--------------------YKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HHHhhcCCc--------------------HHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 5553 4553 467888888884 6664 345788888888888888888888888874
No 133
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=89.80 E-value=1.6 Score=43.08 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=58.4
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCC----CCCcHHHHHHH--cCCHHHHHHHHHCC-CCCCcc---CCCCCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDF----DRRNILHTACS--VGKLDIVKYCLENG-VSVHIR---DNYDISPL 535 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~----~g~TpLh~Aa~--~g~~~iv~~LL~~g-adin~~---d~~g~TpL 535 (659)
...|.+|..++..+++.+|+.+- +...+|. .+.--+.|+.. ..+..+++++|++| +++|.+ -+.|.|-|
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML 258 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTML 258 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHH
Confidence 35677888899999999999852 1112211 12223444433 23567788888776 566543 35677888
Q ss_pred HHHHHcCCHHHHHHHHHcCCC
Q psy9757 536 HEAVIADQHDIIRLLRHCGAH 556 (659)
Q Consensus 536 ~~Aa~~g~~eivklLl~~ga~ 556 (659)
.-|.++++.+++.+|+++||-
T Consensus 259 DNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 259 DNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred HhHHhcCcHHHHHHHHHcCcc
Confidence 888888888888888888773
No 134
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=83.47 E-value=2.3 Score=34.82 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHC
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLEN 520 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~ 520 (659)
..+..|+..|+.|+++.+++.+ .++ ...+..|+...+.+++++|+++
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4567788888888888877654 222 3467788888888888888775
No 135
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=80.51 E-value=2.5 Score=34.61 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=36.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 565 GDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 565 ~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
...+..|+..|+.|+++.+++.+ .++ ...+..|+...+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35678888888999888888754 222 3568888888888888888875
No 136
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=71.47 E-value=1e+02 Score=36.39 Aligned_cols=64 Identities=16% Similarity=0.286 Sum_probs=42.1
Q ss_pred EeCCCCCHHHHHHhHhC-----CCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhh
Q psy9757 310 RIYPHISNHTVRSFMQS-----PMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILS 384 (659)
Q Consensus 310 ~~~pg~~~~~l~~~~~~-----~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~ 384 (659)
-+.||--.+.+.+++.. ++.||||-| |.-|+ +...+.+..|.++|+||+.+.. ++|.+.+.+.
T Consensus 249 VIt~gdR~Di~l~al~~~~~~~~~a~lIlTg---g~~~~--~~v~~l~~~a~~~~ipVl~t~~-------dT~~ta~~i~ 316 (684)
T PRK05632 249 VVTPGDRSDVILAALLAAMNGPPIAGLLLTG---GYEPD--PRIAKLCEGAFETGLPVLSVDT-------NTYQTALRLQ 316 (684)
T ss_pred EEeCCChHHHHHHHHHhcccCCCceEEEEcC---CCCCC--HHHHHHHhhcccCCCCEEEecC-------CHHHHHHHHH
Confidence 34678888888788775 799999963 33333 3556555566678999886653 4566555444
Q ss_pred c
Q psy9757 385 G 385 (659)
Q Consensus 385 ~ 385 (659)
+
T Consensus 317 ~ 317 (684)
T PRK05632 317 S 317 (684)
T ss_pred H
Confidence 3
No 137
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=56.43 E-value=52 Score=36.02 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHh--cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC
Q psy9757 160 HWIKIANDIKEYY--ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF 215 (659)
Q Consensus 160 ~~~~l~~~i~~~~--~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~ 215 (659)
...+.++.|.+.+ +.+|++|+|-.-.|=.-++....--++...+|||.-+...|.+
T Consensus 320 ~a~~~g~eIa~~Lk~dgVDAvILtstCgtCtrcga~m~keiE~~GIPvV~i~~~~pI~ 377 (431)
T TIGR01917 320 NSKQFAKEFSKELLAAGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHICTVTPIA 377 (431)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeechhHH
Confidence 3344555555444 4599999996666667778888878888899999999888865
No 138
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=56.43 E-value=21 Score=30.99 Aligned_cols=49 Identities=20% Similarity=0.306 Sum_probs=31.9
Q ss_pred eCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 311 IYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 311 ~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
+.||-..+.+..++..++.|+||-+ |.-|. +.+ ++.|.+.|+||+.+..
T Consensus 45 It~gdR~di~~~a~~~~i~~iIltg---~~~~~--~~v---~~la~~~~i~vi~t~~ 93 (105)
T PF07085_consen 45 ITPGDREDIQLAAIEAGIACIILTG---GLEPS--EEV---LELAKELGIPVISTPY 93 (105)
T ss_dssp EEETT-HHHHHHHCCTTECEEEEET---T------HHH---HHHHHHHT-EEEE-SS
T ss_pred EEeCCcHHHHHHHHHhCCCEEEEeC---CCCCC--HHH---HHHHHHCCCEEEEECC
Confidence 3579999999999999999999984 33333 234 4455677899887763
No 139
>COG1879 RbsB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=48.89 E-value=35 Score=35.78 Aligned_cols=47 Identities=11% Similarity=0.239 Sum_probs=38.6
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGG 372 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~ 372 (659)
.++.++..+++||++... ....+.+.+++|.+.|||||..-+...+.
T Consensus 83 ~i~~~ia~~~daIiv~~~-------d~~~~~~~v~~a~~aGIpVv~~d~~~~~~ 129 (322)
T COG1879 83 QIEDLIAQGVDAIIINPV-------DPDALTPAVKKAKAAGIPVVTVDSDIPGP 129 (322)
T ss_pred HHHHHHHcCCCEEEEcCC-------ChhhhHHHHHHHHHCCCcEEEEecCCCCC
Confidence 667778899999999654 34478889999999999999988876663
No 140
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=48.61 E-value=67 Score=35.16 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=40.7
Q ss_pred HHHHHHHHHHh--cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC
Q psy9757 162 IKIANDIKEYY--ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF 215 (659)
Q Consensus 162 ~~l~~~i~~~~--~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~ 215 (659)
.+.+..|.+.+ +.+|++|+|-.-.|=.-++....--++...+|||.-+...|.+
T Consensus 322 ~~~g~eIa~~Lk~dgVDAVILTstCgtC~r~~a~m~keiE~~GiPvv~~~~~~pis 377 (431)
T TIGR01918 322 KQFAKEFVVELKQGGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHMCTVIPIA 377 (431)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeecccHh
Confidence 35555555544 4599999986666666777777777888899999999988875
No 141
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=48.57 E-value=51 Score=36.53 Aligned_cols=94 Identities=17% Similarity=0.091 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHHhc---CcCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHH
Q psy9757 156 MCQVHWIKIANDIKEYYE---SYDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~---~~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~ 229 (659)
...+-+.++.+.|++.++ ..+||+|+|+.. | =-..+++++.+-+..+|++++|=+-.|.... +|...--+.++
T Consensus 107 ~G~~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y~~~~~~~~~V~P~~~~-~~~~v~~YN~~ 185 (425)
T cd02187 107 EGAELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMATFSVFPSPKV-SDTVVEPYNAT 185 (425)
T ss_pred hcHHHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhcCCcceEEEEEecCCCc-CcceeeehHHH
Confidence 355666677777776553 489999999643 3 1234666666556789999999999997643 34433223333
Q ss_pred H-HHcCC-CCCeEEEEeCCeeee
Q psy9757 230 I-LAGNY-DIPEVTVYFNHKLIR 250 (659)
Q Consensus 230 ~-~a~~~-~~~gv~v~~~~~i~~ 250 (659)
. +..-- ..-.|+++-|+.++.
T Consensus 186 lsl~~l~~~~d~~i~~dN~al~~ 208 (425)
T cd02187 186 LSVHQLVENSDETFCIDNEALYD 208 (425)
T ss_pred HHHHHHHhcCCeEEEeecHHHHH
Confidence 2 22211 223556666655443
No 142
>KOG3614|consensus
Probab=45.80 E-value=1e+02 Score=38.51 Aligned_cols=54 Identities=26% Similarity=0.338 Sum_probs=38.6
Q ss_pred HHHHHHcCCHHHHHH-HHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 469 FQSAVREGDIDKIKE-MQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSV 524 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~-Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadi 524 (659)
|.+|..-+..++.+- +...|...+..+ =..++.-|......+.|++|+++|.+.
T Consensus 397 L~LalaWnRvDIA~seIF~~~~~W~s~~--Le~aM~dALv~DR~dFV~LLlEnGv~m 451 (1381)
T KOG3614|consen 397 LKLALAWNRVDIARSEIFLNGAKWKSPD--LESAMDDALVLDRPDFVRLLLENGVSM 451 (1381)
T ss_pred HHHHHHhhhhhHHHHHHhccCccCCchH--HHHHHHHHHHhCcHHHHHHHHHcCcch
Confidence 566777788888874 555566554432 235667778888999999999999874
No 143
>PLN00220 tubulin beta chain; Provisional
Probab=45.31 E-value=52 Score=36.72 Aligned_cols=94 Identities=16% Similarity=0.113 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHHhcC---cCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHH
Q psy9757 156 MCQVHWIKIANDIKEYYES---YDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~---~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~ 229 (659)
..++-+.++.+.|++.++. .+||+|+|+.. | --..++.++.+-+..++++++|=+..|....+..-.......+
T Consensus 108 ~g~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~~~~~~~~v~P~~~~~~~~v~~yN~~l 187 (447)
T PLN00220 108 EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187 (447)
T ss_pred ccHHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHhccccceeeeEEECCCcCCCCccchhHHHH
Confidence 3566667777777766544 67999999764 4 2233555565555678899999999997543333333322223
Q ss_pred HHHcCCC-CCeEEEEeCCeee
Q psy9757 230 ILAGNYD-IPEVTVYFNHKLI 249 (659)
Q Consensus 230 ~~a~~~~-~~gv~v~~~~~i~ 249 (659)
.++.--. .-.|+++-|+.++
T Consensus 188 sl~~l~~~~d~~i~~dN~aL~ 208 (447)
T PLN00220 188 SVHQLVENADECMVLDNEALY 208 (447)
T ss_pred hHHHHHhcCCceEEeehHHHH
Confidence 3332212 2356666666555
No 144
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=44.63 E-value=49 Score=35.32 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=34.2
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
..++.++..+++|||+.. .....+.+.++++.++|+|||...+.
T Consensus 71 ~~i~~li~~~vdgIiv~~-------~d~~al~~~l~~a~~~gIpVV~~d~~ 114 (336)
T PRK15408 71 QLINNFVNQGYNAIIVSA-------VSPDGLCPALKRAMQRGVKVLTWDSD 114 (336)
T ss_pred HHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 357778889999999953 22335678899999999999988764
No 145
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=42.87 E-value=41 Score=33.62 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=38.6
Q ss_pred EEEEEeCCCCCHH----HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 306 VGILRIYPHISNH----TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 306 V~il~~~pg~~~~----~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++ .....+.+ .++.++..+++|||+...... ...+.++++.++|+|||..-+.
T Consensus 31 ~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~-------~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 31 VEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPD-------SLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp EEEE-EESTTTHHHHHHHHHHHHHTTESEEEEESSSTT-------TTHHHHHHHHHTTSEEEEESST
T ss_pred EEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHH-------HHHHHHHHHhhcCceEEEEecc
Confidence 4443 34455544 566677889999999877432 3456678899999999987665
No 146
>cd00578 L-fuc_L-ara-isomerases L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=42.57 E-value=59 Score=36.27 Aligned_cols=65 Identities=22% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH
Q psy9757 156 MCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA 228 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a 228 (659)
-++++..+.++..++ +++||+|+.++|-+-+....-+ +...++||++-+-+-|...+ +..|..++
T Consensus 47 ~~~~~~~~~~~~~~~--~~~d~ii~~~~tf~~~~~~~~~---~~~~~~Pvll~a~~~~~~~~---~~~~~~~s 111 (452)
T cd00578 47 GTPDEARKAAEEFNE--ANCDGLIVWMHTFGPAKMWIAG---LSELRKPVLLLATQFNREIP---DFMNLNQS 111 (452)
T ss_pred CCHHHHHHHHHHHhh--cCCcEEEEcccccccHHHHHHH---HHhcCCCEEEEeCCCCCCCC---chhhhhcc
Confidence 688888888887777 3799999999999998754333 34568999999998876654 23355544
No 147
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=40.88 E-value=3.4e+02 Score=30.55 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=35.8
Q ss_pred cEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhC--CCeEEE
Q psy9757 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDR--NVIIVN 364 (659)
Q Consensus 305 ~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~--gi~vV~ 364 (659)
.|+-+.-.-....+.+.+++++|++.|+|-+-. |+- . ...+.+++..+. +++|+.
T Consensus 215 ~Vgaav~~~~~~~~ra~~Lv~aGVd~i~~D~a~-g~~-~---~~~~~i~~i~~~~~~~~vi~ 271 (475)
T TIGR01303 215 RIGAAVGINGDVGGKAKALLDAGVDVLVIDTAH-GHQ-V---KMISAIKAVRALDLGVPIVA 271 (475)
T ss_pred eehheeeeCccHHHHHHHHHHhCCCEEEEeCCC-CCc-H---HHHHHHHHHHHHCCCCeEEE
Confidence 344443333455678899999999999999887 544 2 455555544444 677775
No 148
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=39.28 E-value=1.5e+02 Score=33.06 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=0.0
Q ss_pred ccCCCCeEEEEecCCccccc-----cCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEE
Q psy9757 70 EDRLESKVLVLYTGGTIGME-----DNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKV 144 (659)
Q Consensus 70 ~~~~~~~i~ii~TGGTI~~~-----~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 144 (659)
+...-+||.||+.||=.++. ......+.+.+....+.|+. .+| ..
T Consensus 291 ~~~~g~rvaivs~sGG~g~l~aD~~~~~Gl~lp~ls~~t~~~L~~--------------------~lp----------~~ 340 (447)
T TIGR02717 291 PLPKGNRVAIITNAGGPGVIATDACEENGLELAELSEATKNKLRN--------------------ILP----------PE 340 (447)
T ss_pred CCCCCCeEEEEECCchHHHHHHHHHHHcCCCcCCCCHHHHHHHHH--------------------hCc----------cc
Q ss_pred EEecCCCCCCC-CCHHHHHHHHHHHHHHhcCcCeEEEEcC---cccHHHHHHHHHHHHhcC-CCcEEEe
Q psy9757 145 VEYTPLLDSSN-MCQVHWIKIANDIKEYYESYDGFVILHG---TDTLSYTASALSFMLENL-GKPVIVT 208 (659)
Q Consensus 145 ~~~~~~~dS~~-~~~~~~~~l~~~i~~~~~~~~g~vv~hG---Tdt~~~ta~~l~~~~~~~-~~pvv~t 208 (659)
....|.+|=.. .+++.+.+..+.+.+. .++|+++|.+. +.....++-.+.-..... .|||+..
T Consensus 341 ~~~~NPlDl~~~~~~~~~~~al~~l~~d-p~vd~Vlv~~~~~~~~~~~~~a~~l~~~~~~~~~KPvv~~ 408 (447)
T TIGR02717 341 ASIKNPVDVLGDATPERYAKALKTVAED-ENVDGVVVVLTPTAMTDPEEVAKGIIEGAKKSNEKPVVAG 408 (447)
T ss_pred cccCCCEecCCCCCHHHHHHHHHHHHcC-CCCCEEEEEccCCccCCHHHHHHHHHHHHHhcCCCcEEEE
No 149
>cd06299 PBP1_LacI_like_13 Ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This group includes the ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This regulatory protein is a member of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial trans
Probab=38.77 E-value=2e+02 Score=28.59 Aligned_cols=50 Identities=16% Similarity=0.264 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCC
Q psy9757 157 CQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQIS 213 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p 213 (659)
.++.+..+.+.+.+ .++|||||...+.... .+.. +...++|||+.+...+
T Consensus 40 ~~~~~~~~~~~l~~--~~vdgiIi~~~~~~~~----~~~~-l~~~~ipvV~~~~~~~ 89 (265)
T cd06299 40 NPETENRYLDNLLS--QRVDGIIVVPHEQSAE----QLED-LLKRGIPVVFVDREIT 89 (265)
T ss_pred CHHHHHHHHHHHHh--cCCCEEEEcCCCCChH----HHHH-HHhCCCCEEEEecccC
Confidence 45666665555443 3699999987544432 2444 3356899999998644
No 150
>PRK02929 L-arabinose isomerase; Provisional
Probab=38.36 E-value=74 Score=36.00 Aligned_cols=68 Identities=12% Similarity=0.009 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCC---hHHHHHHHH
Q psy9757 157 CQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRS---DGVHNFIGA 228 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~---Dg~~Nl~~a 228 (659)
|+++.....+.... -+++||||+.+.|-..+.+..-+ +..++|||++=+-|.-...+-. .+..|+.+|
T Consensus 56 ~~~~i~~~~~~~~~-~~~~dgvi~~m~TFs~a~~~i~~---~~~l~~PvL~~~~Q~~~e~p~~~id~d~m~lnqs 126 (499)
T PRK02929 56 TPDEITAVCREANY-DDNCAGVITWMHTFSPAKMWIRG---LSALQKPLLHLHTQFNAEIPWDTIDMDFMNLNQS 126 (499)
T ss_pred CHHHHHHHHHHccc-cCCCcEEEEccCCCchHHHHHHH---HHHcCCCEEEEecCCCccCCCCCCCcchhhhhhc
Confidence 34444444333221 13599999999999999776543 5678999999988765553321 377888866
No 151
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=38.30 E-value=80 Score=35.05 Aligned_cols=93 Identities=24% Similarity=0.071 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHHHHhc---CcCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChH---HHHHH
Q psy9757 156 MCQVHWIKIANDIKEYYE---SYDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSDG---VHNFI 226 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~---~~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg---~~Nl~ 226 (659)
..++...++.+.|++..+ ..+||+|+|+.. | =--.+++++.+-...+|+++++=+-.|.....+|- +-|-.
T Consensus 108 ~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L~d~y~~~~~~~~~V~P~~~~~s~~~v~~YN~~ 187 (431)
T cd02188 108 QGEEVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPKKLIQTYSVFPNQDESSDVVVQPYNSI 187 (431)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHHHhHcCcceeeeEEecCCCccCCCccceecHHH
Confidence 356777777777777653 479999999654 3 22445555655557789999999999976544443 34433
Q ss_pred HHHHHHcCCCCCeEEEEeCCeee
Q psy9757 227 GALILAGNYDIPEVTVYFNHKLI 249 (659)
Q Consensus 227 ~a~~~a~~~~~~gv~v~~~~~i~ 249 (659)
-++..... ..-.++++-|+.++
T Consensus 188 lsl~~l~e-~~d~~~~~dN~al~ 209 (431)
T cd02188 188 LTLKRLIL-NADCVVVLDNTALN 209 (431)
T ss_pred HHHHHHHH-hCCeeeecchHHHH
Confidence 33333322 22344555554443
No 152
>PTZ00010 tubulin beta chain; Provisional
Probab=38.19 E-value=79 Score=35.27 Aligned_cols=94 Identities=15% Similarity=0.103 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHHh---cCcCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHH
Q psy9757 157 CQVHWIKIANDIKEYY---ESYDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALI 230 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~---~~~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~ 230 (659)
.++-+.++.+.|++.. +..+||+|+|+.. | =-..+++++.+-+..+|+++++=+..|....+..-......++.
T Consensus 109 g~~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~dey~~~~~~~~~v~P~~~~~~~~v~~YN~~ls 188 (445)
T PTZ00010 109 GAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVFPSPKVSDTVVEPYNATLS 188 (445)
T ss_pred hHHHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHhhCCccceeeeEecCCcccCccchhhhHHHHh
Confidence 4445555555555544 4589999999432 2 12345666665567789999999999975543333333333333
Q ss_pred HHcCC-CCCeEEEEeCCeeee
Q psy9757 231 LAGNY-DIPEVTVYFNHKLIR 250 (659)
Q Consensus 231 ~a~~~-~~~gv~v~~~~~i~~ 250 (659)
++... ...+|+++-|+.++.
T Consensus 189 l~~l~~~~d~~i~~dN~al~~ 209 (445)
T PTZ00010 189 VHQLVENADESMCIDNEALYD 209 (445)
T ss_pred HHHHHhcCCceeeeccHHHHH
Confidence 33322 234566666665543
No 153
>TIGR02637 RhaS rhamnose ABC transporter, rhamnose-binding protein. This sugar-binding component of ABC transporter complexes is found in rhamnose catabolism operon contexts. Mutation of this gene in Rhizobium leguminosarum abolishes rhamnose transport and prevents growth on rhamnose as a carbon source.
Probab=37.16 E-value=66 Score=33.19 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=32.9
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++.++..+++|||+.+. -+. .+.+.++++.++|+|||...+.
T Consensus 47 ~~i~~l~~~~vdgiIi~~~----~~~---~~~~~l~~~~~~giPvV~~~~~ 90 (302)
T TIGR02637 47 EVVNSLIAQKVDAIAISAN----DPD---ALVPALKKAMKRGIKVVTWDSG 90 (302)
T ss_pred HHHHHHHHcCCCEEEEeCC----ChH---HHHHHHHHHHHCCCEEEEeCCC
Confidence 4667777789999999653 122 5567788888999999988764
No 154
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=37.04 E-value=76 Score=28.63 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=32.4
Q ss_pred CCCcEEEEEeCC--CCCHHHHHHhHhCCCcEEEEEecCCCCCC
Q psy9757 302 LNLNVGILRIYP--HISNHTVRSFMQSPMEGVILLTYGSGNFP 342 (659)
Q Consensus 302 ~~~~V~il~~~p--g~~~~~l~~~~~~~~~giVl~~~G~G~~p 342 (659)
..++|.++++.- -+++..|..+++.|++||++.|=+.|+=.
T Consensus 25 ~p~~vriIrvpC~Grv~~~~il~Af~~GADGV~V~gC~~g~Ch 67 (124)
T PF02662_consen 25 YPPNVRIIRVPCSGRVDPEFILRAFEKGADGVLVAGCHPGDCH 67 (124)
T ss_pred CCCCeEEEEccCCCccCHHHHHHHHHcCCCEEEEeCCCCCCCC
Confidence 456788887744 47899998889999999999888777643
No 155
>cd06311 PBP1_ABC_sugar_binding_like_3 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=35.42 E-value=1e+02 Score=31.05 Aligned_cols=56 Identities=9% Similarity=0.248 Sum_probs=35.5
Q ss_pred EEEEEeCCCCCHH----HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 306 VGILRIYPHISNH----TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 306 V~il~~~pg~~~~----~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++.....-+.. .++.+...+++|||+.... +. .+.+.++++.++|+|||...+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~~~vDgiii~~~~----~~---~~~~~i~~~~~~gIpvV~~d~~ 94 (274)
T cd06311 35 VEFILVTASNDTEQQNAQQDLLINRKIDALVILPFE----SA---PLTQPVAKAKKAGIFVVVVDRG 94 (274)
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCC----ch---hhHHHHHHHHHCCCeEEEEcCC
Confidence 4444443433333 4555666789999996431 22 3455677888999999987653
No 156
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=35.10 E-value=64 Score=30.52 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=36.6
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
.++.+++.+++=+|+.-||.--.-- ..+.+.+.+|+..||||+.+-.
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G--~Glr~~i~~A~~~giPVLt~V~ 131 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEG--RGLRDEIAAALAAGIPVLTAVP 131 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcC--CCHHHHHHHHHHCCCCEEEEEC
Confidence 5667788899999999998544332 2578889999999999997653
No 157
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=34.96 E-value=80 Score=30.67 Aligned_cols=92 Identities=17% Similarity=0.067 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHHhcCcCeEEEEcCcc--cHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHc
Q psy9757 156 MCQVHWIKIANDIKEYYESYDGFVILHGTD--TLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAG 233 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~~~g~vv~hGTd--t~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~ 233 (659)
...+-+.+..+.|++.++++|+|+|+||.. |=.-.+..+.-.+...++++ ++=+-.|....+.--+.|-..++.-..
T Consensus 64 ~g~~~~~~~~~~ir~~le~~d~~~i~~slgGGTGsG~~~~i~~~~~~~~~~~-~~~~v~P~~~e~~~~~~Na~~~l~~l~ 142 (192)
T smart00864 64 VGREAAEESLDEIREELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILT-VAVVTKPFVFEGVVRPYNAELGLEELR 142 (192)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeccCCCCccccHHHHHHHHHHHcCCcE-EEEEEEeEeecchhHHHHHHHHHHHHH
Confidence 345556666777787788899999999643 22222333333344556665 555777843333333444444444333
Q ss_pred CCCCCeEEEEeCCeee
Q psy9757 234 NYDIPEVTVYFNHKLI 249 (659)
Q Consensus 234 ~~~~~gv~v~~~~~i~ 249 (659)
. ....++++-|+.++
T Consensus 143 ~-~~d~~i~~dN~~l~ 157 (192)
T smart00864 143 E-HVDSLIVIDNDALL 157 (192)
T ss_pred H-hCCEEEEEEhHHHH
Confidence 2 34567777777765
No 158
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=34.23 E-value=1.7e+02 Score=29.28 Aligned_cols=59 Identities=8% Similarity=0.243 Sum_probs=36.9
Q ss_pred cEEEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 305 NVGILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 305 ~V~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.+.++......++ ..++.+...+++|||+.+. . +. ...+.++.+.++|+|||...+...
T Consensus 31 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~dgiIi~~~---~-~~---~~~~~i~~~~~~~ipvv~~~~~~~ 93 (271)
T cd06321 31 GVKVTVVSADYDLNKQVSQIDNFIAAKVDLILLNAV---D-SK---GIAPAVKRAQAAGIVVVAVDVAAE 93 (271)
T ss_pred CeEEEEccCCCCHHHHHHHHHHHHHhCCCEEEEeCC---C-hh---HhHHHHHHHHHCCCeEEEecCCCC
Confidence 4555444444444 3555666778999999531 1 11 234556777788999999987543
No 159
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=32.81 E-value=2.8e+02 Score=27.67 Aligned_cols=71 Identities=14% Similarity=0.140 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHhcCcCeEEEEcCc-ccHHHHHHHHHHHHhcCCCcEEEeccCCCC----CCCCChHHHHHHHHHH
Q psy9757 157 CQVHWIKIANDIKEYYESYDGFVILHGT-DTLSYTASALSFMLENLGKPVIVTGSQISI----FQIRSDGVHNFIGALI 230 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~~~g~vv~hGT-dt~~~ta~~l~~~~~~~~~pvv~tga~~p~----~~~~~Dg~~Nl~~a~~ 230 (659)
+++...++.+.+.+ .++||++|+... +.....+.++..+ ...++|||+-+...+. ....+|=...-..|..
T Consensus 40 ~~~~~~~~i~~l~~--~~vdgiIi~~~~~~~~~~~~~~i~~~-~~~~ipvV~i~~~~~~~~~~~~V~~d~~~~~~~~~~ 115 (273)
T cd06292 40 GGVSEADYVEDLLA--RGVRGVVFISSLHADTHADHSHYERL-AERGLPVVLVNGRAPPPLKVPHVSTDDALAMRLAVR 115 (273)
T ss_pred ChHHHHHHHHHHHH--cCCCEEEEeCCCCCcccchhHHHHHH-HhCCCCEEEEcCCCCCCCCCCEEEECcHHHHHHHHH
Confidence 44555555444443 359999998533 3333334445543 3568999999976543 2344443333344433
No 160
>cd01539 PBP1_GGBP Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=32.50 E-value=1.5e+02 Score=30.54 Aligned_cols=57 Identities=7% Similarity=0.084 Sum_probs=37.7
Q ss_pred cEEEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 305 NVGILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 305 ~V~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
.+.++...+..++ +.++.++..+++|||+.... +. .+.+.++++.+.|+|||..-+.
T Consensus 31 g~~~~~~~~~~~~~~q~~~i~~l~~~~vdgiii~~~~----~~---~~~~~~~~~~~~giPvV~~~~~ 91 (303)
T cd01539 31 KVEFTFYDAKNNQSTQNEQIDTALAKGVDLLAVNLVD----PT---AAQTVINKAKQKNIPVIFFNRE 91 (303)
T ss_pred CeeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecCc----hh---hHHHHHHHHHHCCCCEEEeCCC
Confidence 3555444445454 35677778899999997532 11 2445677788889999987654
No 161
>cd06278 PBP1_LacI_like_2 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=31.42 E-value=2.3e+02 Score=28.04 Aligned_cols=57 Identities=19% Similarity=0.061 Sum_probs=33.9
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC---CCCChHHHHHHHHHHHHcC
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF---QIRSDGVHNFIGALILAGN 234 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~---~~~~Dg~~Nl~~a~~~a~~ 234 (659)
..+||+|+.....+- ..+..+. ..++|||+-+...|.. ....|-...-..+......
T Consensus 53 ~~vdgiii~~~~~~~----~~~~~~~-~~~ipvV~~~~~~~~~~~~~v~~d~~~~g~~~~~~l~~ 112 (266)
T cd06278 53 YRVDGVIVTSGTLSS----ELAEECR-RNGIPVVLINRYVDGPGVDAVCSDNYEAGRLAAELLLA 112 (266)
T ss_pred cCCCEEEEecCCCCH----HHHHHHh-hcCCCEEEECCccCCCCCCEEEEChHHHHHHHHHHHHH
Confidence 359999998654332 2355433 4589999999876532 3445555544544444443
No 162
>PRK09701 D-allose transporter subunit; Provisional
Probab=30.62 E-value=89 Score=32.57 Aligned_cols=45 Identities=11% Similarity=0.209 Sum_probs=32.0
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
+.++.++..+++||||.+.. +. ...+.+.++.++|+|||...++.
T Consensus 73 ~~i~~l~~~~vDgiIi~~~~----~~---~~~~~l~~~~~~giPvV~~~~~~ 117 (311)
T PRK09701 73 QLFEDLSNKNYKGIAFAPLS----SV---NLVMPVARAWKKGIYLVNLDEKI 117 (311)
T ss_pred HHHHHHHHcCCCEEEEeCCC----hH---HHHHHHHHHHHCCCcEEEeCCCC
Confidence 35677778899999998531 22 23344667778999999998764
No 163
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=30.60 E-value=2.7e+02 Score=32.01 Aligned_cols=177 Identities=11% Similarity=0.078 Sum_probs=85.3
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCeeeecC
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVYFNHKLIRGN 252 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~~~~~gv~v~~~~~i~~~~ 252 (659)
..--||+++|.--=..-....|.-...+ +.|+|+...|.|....+.|+.+.+ +-+.+... ++.++-++..+.
T Consensus 62 TGkpgV~~~tsGPGatN~~tgla~A~~d-~~Pll~itGqv~~~~~g~~afQe~-D~~~l~~p------~tk~~~~v~~~~ 133 (550)
T COG0028 62 TGKPGVCLVTSGPGATNLLTGLADAYMD-SVPLLAITGQVPTSLIGTDAFQEV-DQVGLFRP------ITKYNFEVRSPE 133 (550)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHHhc-CCCEEEEeCCccccccCcchhhhc-chhhHhhh------hheeEEEeCCHH
Confidence 3445888777533333323333332323 678876666999999999999886 44444332 445555555554
Q ss_pred ceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcEEEEEeCCCCCH-HHHHHhH---hCCC
Q psy9757 253 RTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISN-HTVRSFM---QSPM 328 (659)
Q Consensus 253 ~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pg~~~-~~l~~~~---~~~~ 328 (659)
++-.+=...+....|+..|| +-.++..+. .... .... ...++..-...|...+ +.|+.+. ...-
T Consensus 134 ~ip~~i~~Af~~A~sgrpGp---v~i~iP~Dv--~~~~---~~~~----~~~~~~~~~~~p~~~~~~~i~~aa~~L~~Ak 201 (550)
T COG0028 134 DIPEVVARAFRIALSGRPGP---VVVDLPKDV--LAAE---AEEP----GPEPAILPPYRPAPPPPEAIRKAAELLAEAK 201 (550)
T ss_pred HHHHHHHHHHHHHhcCCCce---EEEEcChhH--hhcc---cccc----cccccccccCCCCCCcHHHHHHHHHHHHhCC
Confidence 44433333333333433333 222211110 0000 0000 0011222222343333 5555543 3334
Q ss_pred cEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC
Q psy9757 329 EGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS 374 (659)
Q Consensus 329 ~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~ 374 (659)
+=+|+.|.|.-..-. .+.+.+.. -+-|+||+.+.+ ..|.+.
T Consensus 202 rPvIl~G~G~~~a~a-~~~l~~la---e~~~~Pv~~t~~-gkg~~p 242 (550)
T COG0028 202 RPVILAGGGVRRAGA-SEELRELA---EKLGAPVVTTLM-GKGAVP 242 (550)
T ss_pred CCEEEECCCcccccc-HHHHHHHH---HHHCCCEEEccC-cCccCC
Confidence 678888887554432 22343332 345899887665 466664
No 164
>KOG0503|consensus
Probab=30.28 E-value=28 Score=37.01 Aligned_cols=90 Identities=19% Similarity=0.084 Sum_probs=54.5
Q ss_pred CCCeEEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccc---cccc-cccceeEEEEEEec
Q psy9757 73 LESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLV---LPRV-KDTRRVLYKVVEYT 148 (659)
Q Consensus 73 ~~~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~---~p~~-~~~~~~~~~~~~~~ 148 (659)
..+|+.++++||||+|+.-+...+.+.+..+. . ... .+...+.....++. +|.. ..-......+..+.
T Consensus 22 ~~kr~~v~~sg~~~~n~~lp~~~~~~~~g~ia----~--~~~--~s~~~~~~~~~s~~i~~~~~avP~v~~~~~~v~~q~ 93 (368)
T KOG0503|consen 22 LEKRVAVKYSGGTIGNSSLPSIVIFGTGGTIA----G--KGT--DSPTTADYAYGSLTVIVLGGAVPAVSGSANRVYYQV 93 (368)
T ss_pred hhhhhhhhcccccccccccCceeecCCCCeee----c--ccc--cCCccccccccccchhhccccCcccccccceeEEEE
Confidence 88999999999999998766655555433221 0 111 12222222222111 2221 12445555554444
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH
Q psy9757 149 PLLDSSNMCQVHWIKIANDIKE 170 (659)
Q Consensus 149 ~~~dS~~~~~~~~~~l~~~i~~ 170 (659)
...+|+.+++.+...+++.|.+
T Consensus 94 ~~~~s~~ln~~~l~~~~~~I~~ 115 (368)
T KOG0503|consen 94 LNVGSLLLNITMLYNDAKRIAE 115 (368)
T ss_pred EecccccccHHHHHHHHHHHHH
Confidence 4599999999999999998876
No 165
>cd06267 PBP1_LacI_sugar_binding_like Ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.
Probab=29.80 E-value=2.1e+02 Score=28.05 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCC
Q psy9757 158 QVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISI 214 (659)
Q Consensus 158 ~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~ 214 (659)
++...++.+.+.. .++||+|+.....+... +.. +...++|||+.++..|.
T Consensus 41 ~~~~~~~~~~~~~--~~~d~iii~~~~~~~~~----~~~-~~~~~ipvv~~~~~~~~ 90 (264)
T cd06267 41 PEKEREALELLLS--RRVDGIILAPSRLDDEL----LEE-LAALGIPVVLVDRPLDG 90 (264)
T ss_pred HHHHHHHHHHHHH--cCcCEEEEecCCcchHH----HHH-HHHcCCCEEEecccccC
Confidence 4444444444333 36999999988866544 333 34568999999988664
No 166
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=29.47 E-value=1.4e+02 Score=33.75 Aligned_cols=52 Identities=19% Similarity=0.105 Sum_probs=38.3
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCC----CCCCCCChHHHHHHHH
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQI----SIFQIRSDGVHNFIGA 228 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~----p~~~~~~Dg~~Nl~~a 228 (659)
+++||||+.+.|-+.+.+..-+ +..++|||++=+-|. |...+. .+..|+.+|
T Consensus 65 ~~~dgvi~~m~TFs~a~~~i~~---~~~l~~PvL~~~~q~~~~l~~~sid-md~m~l~qa 120 (484)
T cd03557 65 DNCAGVITWMHTFSPAKMWIAG---LTALQKPLLHLHTQFNREIPWDTID-MDFMNLNQS 120 (484)
T ss_pred CCccEEEEccCCCchHHHHHHH---HHHcCCCEEEEccCCCccCCCCCcc-chHHhhhhh
Confidence 4699999999999999776543 567899999988884 222333 256777776
No 167
>cd01545 PBP1_SalR Ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. The SalR binds to glucose based compound Salicin which is chemically related to aspirin. The ligand-binding of SalR is structurally homologous to the periplasmic sugar-binding domain of ABC-transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand bind
Probab=28.98 E-value=3.3e+02 Score=26.93 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=33.0
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC---CCCChHHHHHHHHHHHHc
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF---QIRSDGVHNFIGALILAG 233 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~---~~~~Dg~~Nl~~a~~~a~ 233 (659)
..+||+|+..+++.- ..++.. +...++|||+.++..|.. ...+|-...-..|.....
T Consensus 55 ~~vdgiii~~~~~~~---~~~~~~-~~~~~ipvv~i~~~~~~~~~~~V~~d~~~~g~~a~~~l~ 114 (270)
T cd01545 55 SRVDGVILTPPLSDN---PELLDL-LDEAGVPYVRIAPGTPDPDSPCVRIDDRAAAREMTRHLI 114 (270)
T ss_pred CCCCEEEEeCCCCCc---cHHHHH-HHhcCCCEEEEecCCCCCCCCeEEeccHHHHHHHHHHHH
Confidence 359999998775321 123344 335689999999876542 233454444444444443
No 168
>cd01541 PBP1_AraR Ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of AraR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which i
Probab=27.84 E-value=2e+02 Score=28.73 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=36.4
Q ss_pred EEEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 306 VGILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 306 V~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
..++....+.+. +.++.++..+++|||+.... +..+. ...+.++.+.+.|+|||...+..
T Consensus 30 ~~~~~~~~~~~~~~~~~~i~~l~~~~vdgii~~~~~-~~~~~---~~~~~~~~~~~~~ipvV~~~~~~ 93 (273)
T cd01541 30 YSLLLASTNNDPERERKCLENMLSQGIDGLIIEPTK-SALPN---PNIDLYLKLEKLGIPYVFINASY 93 (273)
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeccc-ccccc---ccHHHHHHHHHCCCCEEEEecCC
Confidence 334444455555 35667778899999996532 22221 11234556678899999887653
No 169
>cd01541 PBP1_AraR Ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of AraR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which i
Probab=27.34 E-value=1.6e+02 Score=29.46 Aligned_cols=40 Identities=20% Similarity=0.340 Sum_probs=24.1
Q ss_pred cCcCeEEEEcCcccHHH-HHHHHHHHHhcCCCcEEEeccCCC
Q psy9757 173 ESYDGFVILHGTDTLSY-TASALSFMLENLGKPVIVTGSQIS 213 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~-ta~~l~~~~~~~~~pvv~tga~~p 213 (659)
.++||+|+.-+++.... ...++... ...++|||+.+...+
T Consensus 54 ~~vdgii~~~~~~~~~~~~~~~~~~~-~~~~ipvV~~~~~~~ 94 (273)
T cd01541 54 QGIDGLIIEPTKSALPNPNIDLYLKL-EKLGIPYVFINASYE 94 (273)
T ss_pred cCCCEEEEeccccccccccHHHHHHH-HHCCCCEEEEecCCC
Confidence 35999999865433211 11233332 345789999987654
No 170
>KOG1185|consensus
Probab=27.29 E-value=2.2e+02 Score=31.90 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=82.8
Q ss_pred HHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH--HHHHcCCCCCeEE
Q psy9757 164 IANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA--LILAGNYDIPEVT 241 (659)
Q Consensus 164 l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a--~~~a~~~~~~gv~ 241 (659)
..+.|++.+.+.|-|||.-|-|||.--++.|-- . -| |-.-++++=|.+-+-.. |..|.......|+
T Consensus 385 ~~~~vre~L~~~d~ilVsEGantmdigr~~l~~---~--~P-------r~rLDaGtfgTMGVG~Gfalaaa~~~P~~~V~ 452 (571)
T KOG1185|consen 385 VLQTVRELLPNDDTILVSEGANTMDIGRTLLPP---R--GP-------RRRLDAGTFGTMGVGLGFALAAALAAPDRKVV 452 (571)
T ss_pred HHHHHHHhcCCCCcEEEecCCcchhhhhhhccC---C--Cc-------ccccCCccccccccchhHHHHHHhhCCCCeEE
Confidence 334455555567899999999999876653221 1 11 11223455555544443 3333333334689
Q ss_pred EEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccc-cCCCCCcEEEEEeCCCCCHHH
Q psy9757 242 VYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDV-QSQLNLNVGILRIYPHISNHT 319 (659)
Q Consensus 242 v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~V~il~~~pg~~~~~ 319 (659)
++++|.-+ -.+.-.+++|.--+-+.+.-|.++ ..+-.. ...+ +.+.. .......+.. +.+-..++.
T Consensus 453 ~veGDsaF------GfSaME~ET~vR~~Lpvv~vV~NN~Giyg~d---~~~~-~~I~e~~~~~~~p~~~--l~~~~rY~~ 520 (571)
T KOG1185|consen 453 CVEGDSAF------GFSAMELETFVRYKLPVVIVVGNNNGIYGLD---DDGW-KQISEQDPTLDLPPTA--LLANTRYDK 520 (571)
T ss_pred EEecCccc------CcchhhHHHHHHhcCCeEEEEecCCcccccC---cccH-HHHhhcCcccCCCccc--ccccccHHH
Confidence 88887654 233445566766666666666532 111110 0000 11110 0011112222 234455665
Q ss_pred HHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCC
Q psy9757 320 VRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRN 359 (659)
Q Consensus 320 l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~g 359 (659)
+..+ -|.+|.++.. ..++..+++++-+.+
T Consensus 521 v~ka--~G~kG~~v~t---------~~el~~~l~~a~q~~ 549 (571)
T KOG1185|consen 521 VAKA--FGGKGYFVST---------VEELLAALQQACQDT 549 (571)
T ss_pred HHHH--cCCCceeeCC---------HHHHHHHHHHHHhcC
Confidence 5443 3788888872 337888888887766
No 171
>PRK08322 acetolactate synthase; Reviewed
Probab=27.04 E-value=1.7e+02 Score=33.49 Aligned_cols=45 Identities=16% Similarity=0.219 Sum_probs=28.9
Q ss_pred CeEEEEc-CcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHH
Q psy9757 176 DGFVILH-GTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGV 222 (659)
Q Consensus 176 ~g~vv~h-GTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~ 222 (659)
-|+|++| |...+-.......-.. ...|||+...+.|......++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~--~~~Pll~i~g~~~~~~~~~~~~ 109 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQL--GGMPMVAITGQKPIKRSKQGSF 109 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhh--cCCCEEEEeccccccccCCCcc
Confidence 4666666 7777766655544433 3679887777888776555543
No 172
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=26.74 E-value=1.6e+02 Score=32.01 Aligned_cols=93 Identities=23% Similarity=0.157 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHHhcC---cCeEEEEcCcc--cH-HHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHH
Q psy9757 157 CQVHWIKIANDIKEYYES---YDGFVILHGTD--TL-SYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALI 230 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~---~~g~vv~hGTd--t~-~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~ 230 (659)
.++.+.++.+.|++.+++ .+||+|+|+.+ |= --.+.+++.+-+..+|..++|=+-.|....+.--......++.
T Consensus 68 g~~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~y~~~~i~~~~v~P~~~~~~~~v~~yN~~ls 147 (382)
T cd06059 68 GPELIDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYPKILINTFSIFPSPQGSSNVVEPYNSILS 147 (382)
T ss_pred CHHHHHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHhcCccceEeEEEeccCccCCccccchHHHHh
Confidence 356667777777766643 67999999444 22 2334455554445678888888888876543222222222222
Q ss_pred HHcCC-CCCeEEEEeCCeee
Q psy9757 231 LAGNY-DIPEVTVYFNHKLI 249 (659)
Q Consensus 231 ~a~~~-~~~gv~v~~~~~i~ 249 (659)
+..-. ....+++.-|+.++
T Consensus 148 l~~L~e~sd~~i~~~N~~l~ 167 (382)
T cd06059 148 LNHLLENSDSVILFDNEALY 167 (382)
T ss_pred HHHHHhcCCeeEEeehHHHH
Confidence 22211 23355666565444
No 173
>COG4213 XylF ABC-type xylose transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=26.64 E-value=92 Score=32.73 Aligned_cols=53 Identities=9% Similarity=0.244 Sum_probs=40.9
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCch
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTY 377 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y 377 (659)
..|+..+..|++.+||.++-+++ +-++++.|.+.|++||.-.|.....-...|
T Consensus 72 ~qien~i~qg~~vlvi~a~d~~~-------l~~~i~~A~~~gikViaYDRlI~n~dvd~Y 124 (341)
T COG4213 72 AQIENMINQGVKVLVIGAIDGGV-------LSNAVEKAKSEGIKVIAYDRLINNADVDFY 124 (341)
T ss_pred HHHHHHHhcCCCEEEEEeccchh-------HHHHHHHHHHcCCeEEEeecccccCCccEE
Confidence 46778888999999999986554 445688999999999999887766333334
No 174
>PF01220 DHquinase_II: Dehydroquinase class II; InterPro: IPR001874 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. Class-II enzymes are homododecameric enzymes of about 17 kDa. They are found in some bacteria such as actinomycetales [, ] and some fungi where they act in a catabolic pathway that allows the use of quinic acid as a carbon source.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 3N8K_J 3N7A_I 3N87_F 3N8N_H 3N86_N 1H0S_A 3N59_J 1H05_A 1H0R_A 2Y71_A ....
Probab=26.55 E-value=1.3e+02 Score=27.76 Aligned_cols=45 Identities=29% Similarity=0.340 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEE
Q psy9757 160 HWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVI 206 (659)
Q Consensus 160 ~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv 206 (659)
+--+|.++|++..+++||+||==|-=|- |+++|--.+...++|+|
T Consensus 52 ~EGelid~I~~a~~~~dgiIINpga~th--tS~Ai~DAl~~~~~P~v 96 (140)
T PF01220_consen 52 HEGELIDWIHEARDDVDGIIINPGAYTH--TSIAIRDALKAISIPVV 96 (140)
T ss_dssp SHHHHHHHHHHHTCTTSEEEEE-GGGGH--T-HHHHHHHHCCTS-EE
T ss_pred CHHHHHHHHHHHHhhCCEEEEccchhcc--ccHHHHHHHHcCCCCEE
Confidence 4567889999998889999998886654 44445445667788887
No 175
>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=26.49 E-value=3.2e+02 Score=28.62 Aligned_cols=88 Identities=18% Similarity=0.120 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhcCcCeEEEEcC----cccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcC
Q psy9757 159 VHWIKIANDIKEYYESYDGFVILHG----TDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGN 234 (659)
Q Consensus 159 ~~~~~l~~~i~~~~~~~~g~vv~hG----Tdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~ 234 (659)
+-+.+..+.|++.++++|.++|+|| |.|=. |..+.-+....+++++-.. -.|....+.--+.|-..++.-...
T Consensus 69 ~~a~~~~~~I~~~l~~~d~v~i~aglGGGTGSG~--ap~ia~~a~e~g~~~~~vv-t~Pf~~Eg~~~~~nA~~~l~~L~~ 145 (304)
T cd02201 69 KAAEESREEIKEALEGADMVFITAGMGGGTGTGA--APVIAKIAKEMGALTVAVV-TKPFSFEGKKRMRQAEEGLEELRK 145 (304)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccCCCcchhH--HHHHHHHHHHcCCCEEEEE-eCCccccchhHHHHHHHHHHHHHH
Confidence 3444455667777788999999996 66544 3344444555666655444 467766665556665555555443
Q ss_pred CCCCeEEEEeCCeeee
Q psy9757 235 YDIPEVTVYFNHKLIR 250 (659)
Q Consensus 235 ~~~~gv~v~~~~~i~~ 250 (659)
....++++-|++++.
T Consensus 146 -~~d~~ividN~~L~~ 160 (304)
T cd02201 146 -HVDTLIVIPNDKLLE 160 (304)
T ss_pred -hCCEEEEEecHHHHH
Confidence 234677777777764
No 176
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=25.91 E-value=1.6e+02 Score=28.91 Aligned_cols=42 Identities=14% Similarity=0.198 Sum_probs=29.9
Q ss_pred CCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 326 SPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 326 ~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
+.+++|||...+.|.-+.....+.+.++...+.+.|||....
T Consensus 33 ~~i~~ivl~~~s~Gg~~~~~~~i~~~i~~~~~~~kpvia~v~ 74 (208)
T cd07023 33 DSVKAVVLRINSPGGSVVASEEIYREIRRLRKAKKPVVASMG 74 (208)
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 569999999988777654334566667666666888886554
No 177
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=25.88 E-value=1.5e+02 Score=29.33 Aligned_cols=91 Identities=23% Similarity=0.162 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHh---cCcCeEEEEcCcc--cHHHHHHHHHHHHhcC-CCcEEEeccCCCCCCCCChHHHHHHHHHHH
Q psy9757 158 QVHWIKIANDIKEYY---ESYDGFVILHGTD--TLSYTASALSFMLENL-GKPVIVTGSQISIFQIRSDGVHNFIGALIL 231 (659)
Q Consensus 158 ~~~~~~l~~~i~~~~---~~~~g~vv~hGTd--t~~~ta~~l~~~~~~~-~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~ 231 (659)
.+.+.++.+.|++.+ +++++|+|+||.. |=.=.+..|.-.+... ++-.|++=+..|....+.--+.|-..++..
T Consensus 104 ~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP~~~e~~~~~~Na~~~l~~ 183 (216)
T PF00091_consen 104 EEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILPFSSEGVVEPYNALLSLSE 183 (216)
T ss_dssp HHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-CGGGSHHHHHHHHHHHHH
T ss_pred cccccccccccchhhccccccccceecccccceeccccccccchhhhccccccceeeccccccccccccccceehhHHHH
Confidence 346666777777776 6699999999653 3333333333334433 344666666778843333344555555444
Q ss_pred HcCCCCCeEEEEeCCeee
Q psy9757 232 AGNYDIPEVTVYFNHKLI 249 (659)
Q Consensus 232 a~~~~~~gv~v~~~~~i~ 249 (659)
... ..-.|+++-|+.++
T Consensus 184 l~~-~~d~~i~~dN~~l~ 200 (216)
T PF00091_consen 184 LQE-YADSVILFDNDALY 200 (216)
T ss_dssp HHH-TSSEEEEEEHHHHH
T ss_pred HHH-hCCEEEEEcHHHHH
Confidence 332 22346666666554
No 178
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=25.59 E-value=1.5e+02 Score=29.65 Aligned_cols=50 Identities=10% Similarity=0.101 Sum_probs=33.3
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++.+...+++|+|+.+... +-+. ...+.++.+.++|+|||...+...+
T Consensus 46 ~~i~~l~~~~vdgiIi~~~~~-~~~~---~~~~~i~~~~~~~ipvV~i~~~~~~ 95 (273)
T cd06292 46 DYVEDLLARGVRGVVFISSLH-ADTH---ADHSHYERLAERGLPVVLVNGRAPP 95 (273)
T ss_pred HHHHHHHHcCCCEEEEeCCCC-Cccc---chhHHHHHHHhCCCCEEEEcCCCCC
Confidence 456777778999999975321 1111 3445566777889999998775433
No 179
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=25.52 E-value=4.4e+02 Score=27.11 Aligned_cols=74 Identities=14% Similarity=0.010 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC----CCCChHHHHHHHHH
Q psy9757 154 SNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF----QIRSDGVHNFIGAL 229 (659)
Q Consensus 154 ~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~----~~~~Dg~~Nl~~a~ 229 (659)
++..++...++.+.+.. .++|||||. +.|+-. ....+..+. ..++|||+.++..+.. ...+|-..--..+.
T Consensus 36 ~~~~~~~q~~~i~~l~~--~~vDgIIi~-~~~~~~-~~~~l~~~~-~~~iPvV~~d~~~~~~~~~~~V~~d~~~~g~~~~ 110 (302)
T TIGR02634 36 ANGNEAKQISQIENLIA--RGVDVLVII-PQNGQV-LSNAVQEAK-DEGIKVVAYDRLINDADIDFYLSFDNEKVGEMQA 110 (302)
T ss_pred CCCCHHHHHHHHHHHHH--cCCCEEEEe-CCChhH-HHHHHHHHH-HCCCeEEEecCcCCCCCccEEEecCHHHHHHHHH
Confidence 34456655554444333 359999997 555422 123444433 4578999998765322 23445444433344
Q ss_pred HHH
Q psy9757 230 ILA 232 (659)
Q Consensus 230 ~~a 232 (659)
...
T Consensus 111 ~~L 113 (302)
T TIGR02634 111 RAV 113 (302)
T ss_pred HHH
Confidence 333
No 180
>KOG1432|consensus
Probab=25.24 E-value=1.5e+02 Score=31.56 Aligned_cols=52 Identities=29% Similarity=0.317 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCCc--EEEeccCCCCCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q psy9757 190 TASALSFMLENLGKP--VIVTGSQISIFQIRSDGVHNFIGALILAGNYDIPEVTVY 243 (659)
Q Consensus 190 ta~~l~~~~~~~~~p--vv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~~~~~gv~v~ 243 (659)
|-.|++-+| ++++| |||||-+.-. ....|+..-|..||.=|.+..+|-+.+.
T Consensus 88 Tt~F~~rvL-~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~l 141 (379)
T KOG1432|consen 88 TTNFVSRVL-ASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVL 141 (379)
T ss_pred HHHHHHHHH-hccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEe
Confidence 455788777 57889 9999999887 6677888888888887777667755443
No 181
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=24.93 E-value=1.7e+02 Score=26.15 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=35.2
Q ss_pred EEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 306 VGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 306 V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++...+.++.+.|+.+ ++.|-|...+.|.-+++ +..|.++||+|..++-+
T Consensus 41 ~ii~~~~~~~~~~~l~~~--~~Lk~I~~~~~G~d~id---------~~~a~~~gI~V~n~~g~ 92 (133)
T PF00389_consen 41 AIIVGSGTPLTAEVLEAA--PNLKLISTAGAGVDNID---------LEAAKERGIPVTNVPGY 92 (133)
T ss_dssp EEEESTTSTBSHHHHHHH--TT-SEEEESSSSCTTB----------HHHHHHTTSEEEE-TTT
T ss_pred EEEEcCCCCcCHHHHhcc--ceeEEEEEcccccCccc---------HHHHhhCeEEEEEeCCc
Confidence 333333334788988886 67899988888877775 44677999988877753
No 182
>PRK05858 hypothetical protein; Provisional
Probab=24.87 E-value=2.3e+02 Score=32.32 Aligned_cols=47 Identities=13% Similarity=0.261 Sum_probs=31.0
Q ss_pred CeEEEEc-CcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHH
Q psy9757 176 DGFVILH-GTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHN 224 (659)
Q Consensus 176 ~g~vv~h-GTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~N 224 (659)
-|++++| |.-.+--...+..-.. ...|||+.+.+.|....+.++.+.
T Consensus 68 ~gv~~~t~GpG~~n~~~~i~~A~~--~~~Pvl~i~g~~~~~~~~~~~~q~ 115 (542)
T PRK05858 68 PGVAVLTAGPGVTNGMSAMAAAQF--NQSPLVVLGGRAPALRWGMGSLQE 115 (542)
T ss_pred CeEEEEcCCchHHHHHHHHHHHHh--cCCCEEEEeCCCCcccCCCCCCcc
Confidence 4676666 7777666554444323 367999888888888766665543
No 183
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=24.76 E-value=1.9e+02 Score=24.14 Aligned_cols=48 Identities=13% Similarity=0.252 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHh-c--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEec
Q psy9757 160 HWIKIANDIKEYY-E--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTG 209 (659)
Q Consensus 160 ~~~~l~~~i~~~~-~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tg 209 (659)
|+.+.+..|.+.+ . ..+.++|.+|.+ +++.-.+-.+. ...+-||+||.
T Consensus 7 dRyeTs~~va~~~~~~~~~~~v~ia~g~~-~~Dalsa~~~a-~~~~~PIll~~ 57 (92)
T PF04122_consen 7 DRYETSAKVAKKFYPDNKSDKVYIASGDN-FADALSASPLA-AKNNAPILLVN 57 (92)
T ss_pred CHHHHHHHHHHHhcccCCCCEEEEEeCcc-hhhhhhhHHHH-HhcCCeEEEEC
Confidence 4455555565553 2 589999999977 44432233332 23578999998
No 184
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=24.54 E-value=1.4e+02 Score=30.17 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=30.7
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
.++.+...+++|||+.+.. +. ...+.++++.++|+|||..-+.
T Consensus 47 ~i~~~~~~~~Dgiii~~~~----~~---~~~~~i~~~~~~~iPvV~~~~~ 89 (282)
T cd06318 47 DVEDLLTRGVNVLIINPVD----PE---GLVPAVAAAKAAGVPVVVVDSS 89 (282)
T ss_pred HHHHHHHcCCCEEEEecCC----cc---chHHHHHHHHHCCCCEEEecCC
Confidence 5677777899999997532 22 2334567778899999988764
No 185
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=24.49 E-value=9.3e+02 Score=26.17 Aligned_cols=48 Identities=17% Similarity=0.423 Sum_probs=30.1
Q ss_pred CCHHHHHHhHh---CCCcEEEEE-ecCC-CCCCCCchHHHHHHHHHH-hCCCeEE
Q psy9757 315 ISNHTVRSFMQ---SPMEGVILL-TYGS-GNFPSNRSDLIDELRLAS-DRNVIIV 363 (659)
Q Consensus 315 ~~~~~l~~~~~---~~~~giVl~-~~G~-G~~p~~~~~~~~~l~~a~-~~gi~vV 363 (659)
-+.+.++.+++ ...++||+| .+|. |.+++ .+++++.|++.. +.|+.+|
T Consensus 180 ~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~-~~~~l~~l~~l~~~~~~llI 233 (423)
T TIGR00713 180 NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPP-KPEFLAGLRALTEEYGSLLI 233 (423)
T ss_pred CCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCC-CHHHHHHHHHHHHHhCCEEE
Confidence 36777887776 457899999 4455 44444 335566666554 5566554
No 186
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=24.44 E-value=1.3e+02 Score=30.16 Aligned_cols=44 Identities=11% Similarity=0.303 Sum_probs=30.0
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++.++..+++|||+..... . .+.+.++.+.++|+|||...+.
T Consensus 48 ~~i~~l~~~~vdgiIi~~~~~----~---~~~~~~~~~~~~~iPvV~~~~~ 91 (275)
T cd06320 48 SIAENMINKGYKGLLFSPISD----V---NLVPAVERAKKKGIPVVNVNDK 91 (275)
T ss_pred HHHHHHHHhCCCEEEECCCCh----H---HhHHHHHHHHHCCCeEEEECCC
Confidence 356667778999999854321 1 2334466777889999988764
No 187
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=24.31 E-value=1.3e+02 Score=27.24 Aligned_cols=50 Identities=32% Similarity=0.386 Sum_probs=33.3
Q ss_pred cCcCeEEEEcC-cccHHHHHHHHHHHHhc-CCC-cEEEeccCCCCCCCCChHHHHHHH
Q psy9757 173 ESYDGFVILHG-TDTLSYTASALSFMLEN-LGK-PVIVTGSQISIFQIRSDGVHNFIG 227 (659)
Q Consensus 173 ~~~~g~vv~hG-Tdt~~~ta~~l~~~~~~-~~~-pvv~tga~~p~~~~~~Dg~~Nl~~ 227 (659)
+..|+||++=| ..||+|....+.+.--. .+| ||||-+-.- ..|+...+..
T Consensus 52 ~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g-----~w~~l~~~l~ 104 (133)
T PF03641_consen 52 ESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDG-----FWDPLLEFLD 104 (133)
T ss_dssp HHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGG-----CCHHHHHHHH
T ss_pred HhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcc-----hHHHHHHHHH
Confidence 44789998874 78999998888754322 345 999977321 4556555544
No 188
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=24.23 E-value=1.4e+02 Score=27.83 Aligned_cols=44 Identities=32% Similarity=0.242 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEE
Q psy9757 161 WIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVI 206 (659)
Q Consensus 161 ~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv 206 (659)
--+|.++|++..+++||+||==|-=| .|+++|--.+...++|+|
T Consensus 54 EGelId~i~~a~~~~dgiIINpga~T--HtSiAl~DAl~~~~~P~V 97 (146)
T PRK13015 54 EGELIDWIHEARGDVAGIVINPGAYT--HTSVAIRDALAALELPVI 97 (146)
T ss_pred HHHHHHHHHHhhhcCCEEEEcchHHh--hhHHHHHHHHHcCCCCEE
Confidence 45788888888777999998766433 244455445666677776
No 189
>PLN00222 tubulin gamma chain; Provisional
Probab=24.13 E-value=1.6e+02 Score=32.91 Aligned_cols=93 Identities=23% Similarity=0.089 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHHh---cCcCeEEEEcCcc--cH-HHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChH---HHHHHH
Q psy9757 157 CQVHWIKIANDIKEYY---ESYDGFVILHGTD--TL-SYTASALSFMLENLGKPVIVTGSQISIFQIRSDG---VHNFIG 227 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~---~~~~g~vv~hGTd--t~-~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg---~~Nl~~ 227 (659)
.++...++.+.|++.. +..+||+|+|+.. |= --.++++..+-+..++++++|=+-.|.....+|- +-|-.-
T Consensus 111 g~~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L~d~y~~~~~~~~~v~P~~~~~~~~vv~~YN~~l 190 (454)
T PLN00222 111 GEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLL 190 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHHHhhcCCcceeeEEecCCCcccCCceeeecHHHH
Confidence 4667777777777654 4589999999544 31 2445555554456788899999999975333432 445443
Q ss_pred HHHHHcCCCCCeEEEEeCCeeee
Q psy9757 228 ALILAGNYDIPEVTVYFNHKLIR 250 (659)
Q Consensus 228 a~~~a~~~~~~gv~v~~~~~i~~ 250 (659)
++..... ...+|+++-|+.++.
T Consensus 191 sl~~l~~-~~D~~~~~dN~al~~ 212 (454)
T PLN00222 191 TLKRLTL-NADCVVVLDNTALNR 212 (454)
T ss_pred hHHHHHh-cCCeeeEecHHHHHH
Confidence 4333322 234566666665554
No 190
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=23.99 E-value=3.1e+02 Score=31.90 Aligned_cols=48 Identities=15% Similarity=0.181 Sum_probs=31.5
Q ss_pred cCeEEEEc-CcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHH
Q psy9757 175 YDGFVILH-GTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHN 224 (659)
Q Consensus 175 ~~g~vv~h-GTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~N 224 (659)
--|++++| |-..+.-...+.+-.. -..|||+...+.|....+.++.+.
T Consensus 85 k~gv~~~t~GPG~~n~l~gl~~A~~--d~~Pvl~i~G~~~~~~~~~~~~Qe 133 (616)
T PRK07418 85 KVGVCFGTSGPGATNLVTGIATAQM--DSVPMVVITGQVPRPAIGTDAFQE 133 (616)
T ss_pred CCeEEEECCCccHHHHHHHHHHHHh--cCCCEEEEecCCCccccCCCCccc
Confidence 34666655 7777766665555433 367888877788887777666554
No 191
>PF01671 ASFV_360: African swine fever virus multigene family 360 protein; InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=23.72 E-value=2.7e+02 Score=27.47 Aligned_cols=122 Identities=13% Similarity=0.120 Sum_probs=67.3
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHc-CCHHHHH
Q psy9757 504 TACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLR-HCGAHLTNEPMFLGDVLTNAAAR-GMIKRLQ 581 (659)
Q Consensus 504 ~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl-~~ga~~~~~~~~g~t~L~~Aa~~-g~~~~v~ 581 (659)
.|++.+-.+.++++-++-...+. .-|..|...++.-=+--+. +...++ +-..-+.+||.+ ++...+-
T Consensus 91 ~Av~ynL~~AI~Yfyq~y~hl~~------WRL~CaL~fNnvfdlHe~y~~eki~m-----dineMM~lAC~~d~N~ltIY 159 (215)
T PF01671_consen 91 IAVQYNLKEAIQYFYQKYPHLND------WRLICALYFNNVFDLHEIYNKEKIRM-----DINEMMRLACMYDNNFLTIY 159 (215)
T ss_pred HHHHhhhHHHHHHHHHhccchhh------HHHHHHHHhCCHHHHHHHHHHhhcCC-----CHHHHHHHHHcCCCCchHHH
Confidence 35555566666666665433321 1344444444432222222 222222 223346666655 3566666
Q ss_pred HHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHH
Q psy9757 582 SYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELL 649 (659)
Q Consensus 582 ~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~L 649 (659)
+..-.|||+| .++...+++.+..-+=+-++.||+.-.. ..++|.+.++..++..|
T Consensus 160 YCf~LGAdIN-------~AM~~si~~~n~~N~fFCIDLGAnafee------~~~lA~q~~~~~i~~iL 214 (215)
T PF01671_consen 160 YCFALGADIN-------QAMLTSIQNYNIGNMFFCIDLGANAFEE------AKALAEQKNYYNISNIL 214 (215)
T ss_pred HHHHhcccHH-------HHHHHHHHhcccccEEeeeccCCChHHH------HHHHHHHhcHHHHHHHh
Confidence 7777788776 3566677777766666666777776443 45677777776666554
No 192
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=23.46 E-value=1.4e+02 Score=27.84 Aligned_cols=45 Identities=33% Similarity=0.370 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEE
Q psy9757 160 HWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVI 206 (659)
Q Consensus 160 ~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv 206 (659)
+--+|.++|++..+++||+||==|-=| .|+++|--.+...++|+|
T Consensus 53 ~EGelId~I~~a~~~~dgiiINpga~T--HtSiAl~DAl~~~~~P~V 97 (146)
T PRK05395 53 HEGELIDRIHEARDGADGIIINPGAYT--HTSVALRDALAAVSIPVI 97 (146)
T ss_pred cHHHHHHHHHhcccCCcEEEECchHHH--HHHHHHHHHHHcCCCCEE
Confidence 346788889988778999999776433 244444445666677777
No 193
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=23.35 E-value=1.2e+02 Score=30.21 Aligned_cols=42 Identities=12% Similarity=0.142 Sum_probs=31.1
Q ss_pred CCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 326 SPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 326 ~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
+.++||||..-+.|.......++..+|++..+.|.|||....
T Consensus 45 ~~ik~vvL~~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~ 86 (222)
T cd07018 45 DRIKGIVLDLDGLSGGLAKLEELRQALERFRASGKPVIAYAD 86 (222)
T ss_pred CCeEEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeC
Confidence 459999999887777554445677777777667899886544
No 194
>cd06277 PBP1_LacI_like_1 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=22.65 E-value=2.8e+02 Score=27.58 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=24.4
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF 215 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~ 215 (659)
.++|||||. ++++-+ .+.. +...++|||+.+...|..
T Consensus 57 ~~vdgiii~-~~~~~~----~~~~-l~~~~ipvV~~~~~~~~~ 93 (268)
T cd06277 57 GKVDGIILL-GGISTE----YIKE-IKELGIPFVLVDHYIPNE 93 (268)
T ss_pred CCCCEEEEe-CCCChH----HHHH-HhhcCCCEEEEccCCCCC
Confidence 369999995 455432 2444 345689999998765543
No 195
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=22.61 E-value=1.5e+02 Score=27.43 Aligned_cols=45 Identities=31% Similarity=0.357 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEE
Q psy9757 160 HWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVI 206 (659)
Q Consensus 160 ~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv 206 (659)
+--+|.++|++..+++||+||==|-=| .|+.+|--.+...++|+|
T Consensus 51 ~EGelId~i~~a~~~~dgiIINpga~T--HtSiAl~DAl~~~~~P~v 95 (141)
T TIGR01088 51 SEGQLIDKIHEAEGQYDGIIINPGALT--HTSVALRDALAAVSLPVV 95 (141)
T ss_pred cHHHHHHHHHhccccCCEEEEcChHHh--hhHHHHHHHHHcCCCCEE
Confidence 345788888888777999999776433 234444444666677777
No 196
>cd06312 PBP1_ABC_sugar_binding_like_4 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=22.60 E-value=1.9e+02 Score=28.98 Aligned_cols=44 Identities=9% Similarity=0.239 Sum_probs=30.9
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++.++..+++|+|+.... +. .+.+.++.+.++|+|||...+..
T Consensus 49 ~i~~l~~~~vdgiii~~~~----~~---~~~~~l~~~~~~~ipvV~~~~~~ 92 (271)
T cd06312 49 LIEAAIAAKPDGIVVTIPD----PD---ALDPAIKRAVAAGIPVISFNAGD 92 (271)
T ss_pred HHHHHHHhCCCEEEEeCCC----hH---HhHHHHHHHHHCCCeEEEeCCCC
Confidence 5566667899999997631 11 23455777788899999887643
No 197
>cd01575 PBP1_GntR Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding,
Probab=22.56 E-value=3e+02 Score=27.15 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccC
Q psy9757 156 MCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQ 211 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~ 211 (659)
..++...++.+.+.+ .++||+|+.-...+. .++.. +...++|||+.+..
T Consensus 39 ~~~~~~~~~~~~l~~--~~vdgiii~~~~~~~----~~~~~-~~~~~ipvv~~~~~ 87 (268)
T cd01575 39 YSPEREEELLRTLLS--RRPAGLILTGLEHTE----RTRQL-LRAAGIPVVEIMDL 87 (268)
T ss_pred CCchhHHHHHHHHHH--cCCCEEEEeCCCCCH----HHHHH-HHhcCCCEEEEecC
Confidence 344554554444432 369999998644442 23443 33458899998754
No 198
>PRK10355 xylF D-xylose transporter subunit XylF; Provisional
Probab=22.47 E-value=2.1e+02 Score=30.26 Aligned_cols=44 Identities=7% Similarity=0.280 Sum_probs=30.7
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++.++..+++|||+.+.. + ....+.++.+.++|+|||+.-+..
T Consensus 73 ~i~~l~~~~vDGiIi~~~~----~---~~~~~~l~~~~~~~iPvV~id~~~ 116 (330)
T PRK10355 73 QIENMINRGVDVLVIIPYN----G---QVLSNVIKEAKQEGIKVLAYDRMI 116 (330)
T ss_pred HHHHHHHcCCCEEEEeCCC----h---hhHHHHHHHHHHCCCeEEEECCCC
Confidence 4556666789999997431 1 123456778888899999987653
No 199
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=22.46 E-value=5.4e+02 Score=23.44 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=33.4
Q ss_pred CeEEEEc-CcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCC
Q psy9757 176 DGFVILH-GTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRS 219 (659)
Q Consensus 176 ~g~vv~h-GTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~ 219 (659)
-+++++| |+..+.-+..+...... ..|+|+-.+++|......
T Consensus 60 ~~v~~~~~gpG~~n~~~~l~~A~~~--~~Pll~i~~~~~~~~~~~ 102 (155)
T cd07035 60 PGVVLVTSGPGLTNAVTGLANAYLD--SIPLLVITGQRPTAGEGR 102 (155)
T ss_pred CEEEEEcCCCcHHHHHHHHHHHHhh--CCCEEEEeCCCccccccC
Confidence 5788888 99999888877776443 789999999999876653
No 200
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=22.34 E-value=1.8e+02 Score=30.41 Aligned_cols=55 Identities=9% Similarity=0.247 Sum_probs=40.9
Q ss_pred CcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEE
Q psy9757 304 LNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIV 363 (659)
Q Consensus 304 ~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV 363 (659)
++++|+.+-+..-++.++.+.+.|++++||-+-|-+ . ++-.+.++.|.+.|+.++
T Consensus 66 ~DlAvi~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~---~--~~~~~l~~~a~~~girvl 120 (291)
T PRK05678 66 ANASVIYVPPPFAADAILEAIDAGIDLIVCITEGIP---V--LDMLEVKAYLERKKTRLI 120 (291)
T ss_pred CCEEEEEcCHHHHHHHHHHHHHCCCCEEEEECCCCC---H--HHHHHHHHHHHHcCCEEE
Confidence 578888887888889999999999999999776632 1 222344556677788776
No 201
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=22.33 E-value=5.4e+02 Score=28.72 Aligned_cols=50 Identities=16% Similarity=0.355 Sum_probs=32.3
Q ss_pred CcEEEEEec-CCCCCCCCchHHHHHHHHHH-hCCCeEEE-eccCCCCCcCCch
Q psy9757 328 MEGVILLTY-GSGNFPSNRSDLIDELRLAS-DRNVIIVN-CSQCSRGGTSDTY 377 (659)
Q Consensus 328 ~~giVl~~~-G~G~~p~~~~~~~~~l~~a~-~~gi~vV~-~sq~~~G~v~~~y 377 (659)
+.++|+|.. |.|.+-...+.++..+++.. ++|++.++ =-|+..|++-..+
T Consensus 223 vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~f 275 (447)
T COG0160 223 VAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMF 275 (447)
T ss_pred eeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccch
Confidence 789999987 76766443557888877654 56765553 3455556654443
No 202
>PLN00221 tubulin alpha chain; Provisional
Probab=22.33 E-value=2.1e+02 Score=32.03 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHh---cCcCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHH
Q psy9757 158 QVHWIKIANDIKEYY---ESYDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALIL 231 (659)
Q Consensus 158 ~~~~~~l~~~i~~~~---~~~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~ 231 (659)
++-+.++-+.|++.+ +..+||+|+|... | =--.+++|+.+-+..+|-+++|=+..|....+..-......++.+
T Consensus 112 ~~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~y~~~~~~~~~v~P~~~~~~~vv~~YN~~Lsl 191 (450)
T PLN00221 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLST 191 (450)
T ss_pred HHHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHhcccccceeeEeeCCCcCCCCchhhhHHHHhH
Confidence 344455555555544 4589999999654 4 345566777666677888899999999764433333333333333
Q ss_pred HcCCC-CCeEEEEeCCeeee
Q psy9757 232 AGNYD-IPEVTVYFNHKLIR 250 (659)
Q Consensus 232 a~~~~-~~gv~v~~~~~i~~ 250 (659)
+.-.. ..+++++-|+.++.
T Consensus 192 ~~l~e~~d~~~~~dN~al~~ 211 (450)
T PLN00221 192 HSLLEHTDVAVLLDNEAIYD 211 (450)
T ss_pred HHHHhhCceeeecchHHHHH
Confidence 33222 23455555555554
No 203
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=22.15 E-value=1.7e+02 Score=28.68 Aligned_cols=40 Identities=10% Similarity=0.207 Sum_probs=28.4
Q ss_pred CCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEec
Q psy9757 326 SPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCS 366 (659)
Q Consensus 326 ~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~s 366 (659)
+.++||||.....|..+....++..+|+... .|.||+..-
T Consensus 29 ~~i~~vvl~~~s~Gg~~~~~~~l~~~i~~~~-~~kpvia~v 68 (207)
T TIGR00706 29 KSIKALLLRINSPGGTVVASEEIYEKLKKLK-AKKPVVASM 68 (207)
T ss_pred CCccEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCCEEEEE
Confidence 4699999998877766654456777776654 468888655
No 204
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=22.13 E-value=1.8e+02 Score=32.24 Aligned_cols=93 Identities=13% Similarity=0.041 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHh---cCcCeEEEEcCcc--c-HHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCCh--HHHHHHHH
Q psy9757 157 CQVHWIKIANDIKEYY---ESYDGFVILHGTD--T-LSYTASALSFMLENLGKPVIVTGSQISIFQIRSD--GVHNFIGA 228 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~---~~~~g~vv~hGTd--t-~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~D--g~~Nl~~a 228 (659)
.++-+.++.+.|++.+ +..+||+|+|+.. | =--.+++++.+-+..+|-.++|=+-.|....+.. -+-|-.-+
T Consensus 110 G~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d~y~~~~~~~~~v~P~~~~~~~~v~~YN~~ls 189 (434)
T cd02186 110 GKEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYGKKSKLEFTVYPSPQVSTAVVEPYNSVLT 189 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHHhcCccceeeEEEeCCCCCCCCeeeehHHHHh
Confidence 3444555555555544 4589999999765 4 2233444555444667667888888887543322 23343333
Q ss_pred HHHHcCCCCCeEEEEeCCeeee
Q psy9757 229 LILAGNYDIPEVTVYFNHKLIR 250 (659)
Q Consensus 229 ~~~a~~~~~~gv~v~~~~~i~~ 250 (659)
+..... ...+++++-|+.++.
T Consensus 190 l~~l~e-~~d~~~~~dN~al~~ 210 (434)
T cd02186 190 THSLLE-HSDCSFMVDNEAIYD 210 (434)
T ss_pred HHHHHh-hCCeeeeeccHHHHH
Confidence 332221 234566666666554
No 205
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=22.12 E-value=1.4e+02 Score=29.36 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=29.5
Q ss_pred CCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 326 SPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 326 ~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
+.+++|||..+..|.-+....++..+++...+.+.|||..-.
T Consensus 37 ~~v~~ivL~~~s~Gg~~~~~~~~~~~l~~~~~~~kpVia~v~ 78 (211)
T cd07019 37 PKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSAG 78 (211)
T ss_pred CCceEEEEEEcCCCcCHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 468999999888776654334555666665666888887654
No 206
>cd06317 PBP1_ABC_sugar_binding_like_8 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Pperiplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=22.09 E-value=7.2e+02 Score=24.53 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCC
Q psy9757 156 MCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQIS 213 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p 213 (659)
-.++.+.++.+.+.. ..+||+||... ++ +.....+.. +...++|||+.+...+
T Consensus 40 ~~~~~~~~~~~~l~~--~~vdgiii~~~-~~-~~~~~~l~~-~~~~~iPvV~~~~~~~ 92 (275)
T cd06317 40 GDVARQAAQVEDLIA--QKVDGIILWPT-DG-QAYIPGLRK-AKQAGIPVVITNSNIS 92 (275)
T ss_pred cCHHHHHHHHHHHHH--cCCCEEEEecC-Cc-cccHHHHHH-HHHCCCcEEEeCCCCC
Confidence 355566555554433 35999998654 32 111223344 3356899999987543
No 207
>PLN02493 probable peroxisomal (S)-2-hydroxy-acid oxidase
Probab=21.52 E-value=2.8e+02 Score=30.11 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=33.9
Q ss_pred CCHHHHHHhHhCCCcEEEEEecCCCCCCCCc--hHHHHHHHHHHhCCCeEEEec
Q psy9757 315 ISNHTVRSFMQSPMEGVILLTYGSGNFPSNR--SDLIDELRLASDRNVIIVNCS 366 (659)
Q Consensus 315 ~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~--~~~~~~l~~a~~~gi~vV~~s 366 (659)
++++....+.+.|++||++.+.|..+.-... -..+..+.+++...++|++..
T Consensus 233 ~~~~dA~~a~~~Gvd~I~VsnhGGrqld~~~~t~~~L~ei~~av~~~~~vi~dG 286 (367)
T PLN02493 233 LTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDG 286 (367)
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCCCCchhHHHHHHHHHHHhCCCCeEEEeC
Confidence 4678788889999999999999977653211 123333444444457776443
No 208
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family. Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi
Probab=21.41 E-value=2.1e+02 Score=29.50 Aligned_cols=48 Identities=13% Similarity=0.201 Sum_probs=32.9
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCC-CchHHHHHHHHHHhC-CCeEEEecc
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPS-NRSDLIDELRLASDR-NVIIVNCSQ 367 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~-~~~~~~~~l~~a~~~-gi~vV~~sq 367 (659)
.|+.+++.|++ ||-..+|.+.-|. ....+.++++++.++ |+.||.++=
T Consensus 82 ai~~a~~~g~~-Vin~S~g~~~~~~~~~~~~~~ai~~a~~~~GvlvVaAAG 131 (275)
T cd05562 82 AIRALAAAGAD-IIVDDIGYLNEPFFQDGPIAQAVDEVVASPGVLYFSSAG 131 (275)
T ss_pred HHHHHHHcCCC-EEEecccccCCCcccCCHHHHHHHHHHHcCCcEEEEeCC
Confidence 44555677888 5556677655552 223577788888887 999998873
No 209
>cd06283 PBP1_RegR_EndR_KdgR_like Ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR. Ligand-binding domain of DNA transcription repressor RegR and other putative regulators such as KdgR and EndR, all of which are members of the LacI-GalR family of bacterial transcription regulators. RegR regulates bacterial competence and the expression of virulence factors, including hyaluronidase. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA b
Probab=21.37 E-value=6.6e+02 Score=24.60 Aligned_cols=37 Identities=22% Similarity=0.333 Sum_probs=24.2
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCC
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISI 214 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~ 214 (659)
.++||+|+......-+ .+.. +...++|||+.+...+.
T Consensus 54 ~~~dgiii~~~~~~~~----~l~~-~~~~~ipvV~~~~~~~~ 90 (267)
T cd06283 54 YQVDGLIVNPTGNNKE----LYQR-LAKNGKPVVLVDRKIPE 90 (267)
T ss_pred cCcCEEEEeCCCCChH----HHHH-HhcCCCCEEEEcCCCCC
Confidence 3599999976543322 2444 33568999999876543
No 210
>cd06309 PBP1_YtfQ_like Periplasmic binding domain of ABC-type YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.
Probab=21.35 E-value=1.7e+02 Score=29.38 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=30.4
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++.++..+++|||+.+.. +. ...+.++.+.++|+|||...+..
T Consensus 47 ~i~~l~~~~vdgiIi~~~~----~~---~~~~~i~~~~~~~iPvV~~~~~~ 90 (273)
T cd06309 47 AIRSFIAQGVDVIILAPVV----ET---GWDPVLKEAKAAGIPVILVDRGV 90 (273)
T ss_pred HHHHHHHcCCCEEEEcCCc----cc---cchHHHHHHHHCCCCEEEEecCc
Confidence 5666677889999996532 11 22344667778899999988753
No 211
>cd06324 PBP1_ABC_sugar_binding_like_13 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=21.30 E-value=3e+02 Score=28.37 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=29.8
Q ss_pred HHHHHhHhC--CCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 318 HTVRSFMQS--PMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 318 ~~l~~~~~~--~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
..++.++.. +++|||+.... +. ..+.++.+.++|+|||...+..
T Consensus 47 ~~i~~~~~~~~~vdgiIi~~~~----~~----~~~~~~~~~~~giPvV~~~~~~ 92 (305)
T cd06324 47 QQARTILQRPDKPDALIFTNEK----SV----APELLRLAEGAGVKLFLVNSGL 92 (305)
T ss_pred HHHHHHHHhccCCCEEEEcCCc----cc----hHHHHHHHHhCCCeEEEEecCC
Confidence 356667778 99999995321 11 2234667778999999887653
No 212
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=21.03 E-value=2e+02 Score=25.84 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=27.4
Q ss_pred CCCcEEEEEeCC--CCCHHHHHHhHhCCCcEEEEEecCCC
Q psy9757 302 LNLNVGILRIYP--HISNHTVRSFMQSPMEGVILLTYGSG 339 (659)
Q Consensus 302 ~~~~V~il~~~p--g~~~~~l~~~~~~~~~giVl~~~G~G 339 (659)
..|+|-|+++.- -.++..+-.++..|++||.+.|--.|
T Consensus 26 yp~~vRiIrv~CsGrvn~~fvl~Al~~GaDGV~v~GC~~g 65 (132)
T COG1908 26 YPPNVRIIRVMCSGRVNPEFVLKALRKGADGVLVAGCKIG 65 (132)
T ss_pred CCCceEEEEeeccCccCHHHHHHHHHcCCCeEEEeccccc
Confidence 446777776654 47788877778889999999875433
No 213
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=20.95 E-value=2.3e+02 Score=29.30 Aligned_cols=44 Identities=9% Similarity=0.238 Sum_probs=31.4
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++.++..+++|||+.+.- +. ...+.++++.+.|+|||..-+..
T Consensus 46 ~i~~l~~~~vDgIIi~~~~----~~---~~~~~l~~~~~~~iPvV~~d~~~ 89 (302)
T TIGR02634 46 QIENLIARGVDVLVIIPQN----GQ---VLSNAVQEAKDEGIKVVAYDRLI 89 (302)
T ss_pred HHHHHHHcCCCEEEEeCCC----hh---HHHHHHHHHHHCCCeEEEecCcC
Confidence 5666677889999997521 11 34556777888999999887653
No 214
>cd01536 PBP1_ABC_sugar_binding_like Periplasmic sugar-binding domain of active transport systems that are members of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type I periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2
Probab=20.93 E-value=3.6e+02 Score=26.46 Aligned_cols=53 Identities=23% Similarity=0.216 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCC
Q psy9757 157 CQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISI 214 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~ 214 (659)
+++...+..+.+.. .++||||+...+. ......+..+. ..++|+|+.++-.|.
T Consensus 40 ~~~~~~~~~~~l~~--~~vdgvi~~~~~~--~~~~~~~~~l~-~~~ip~V~~~~~~~~ 92 (267)
T cd01536 40 DVSKQIQQIEDLIA--QGVDGIIISPVDS--AALTPALKKAN-AAGIPVVTVDSDIDG 92 (267)
T ss_pred CHHHHHHHHHHHHH--cCCCEEEEeCCCc--hhHHHHHHHHH-HCCCcEEEecCCCCc
Confidence 56666666655443 2699999976542 33333444433 457999999886553
No 215
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=20.81 E-value=1.8e+02 Score=26.92 Aligned_cols=45 Identities=33% Similarity=0.330 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEE
Q psy9757 160 HWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVI 206 (659)
Q Consensus 160 ~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv 206 (659)
+--+|.++|++..+++||+||==|-=|- |+.+|--.+...++|+|
T Consensus 51 ~Egelid~I~~a~~~~dgiIINpga~TH--tSvAi~DAl~~~~~P~V 95 (140)
T cd00466 51 HEGELIDWIHEARDGADGIIINPGAYTH--TSIALRDALAAVSIPVI 95 (140)
T ss_pred cHHHHHHHHHHhhccCcEEEEcchHHHH--HHHHHHHHHHcCCCCEE
Confidence 3457888888887779999997764332 34444444666777877
No 216
>PRK10949 protease 4; Provisional
Probab=20.68 E-value=1.4e+02 Score=34.93 Aligned_cols=49 Identities=14% Similarity=0.151 Sum_probs=37.5
Q ss_pred HHHHHhH-hCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEec
Q psy9757 318 HTVRSFM-QSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCS 366 (659)
Q Consensus 318 ~~l~~~~-~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~s 366 (659)
+.|+.+. ++.++||||.--..|.-+...+.+..+|+++.+.|.|||++.
T Consensus 354 ~~l~~a~~D~~vkaVvLrInSpGGs~~ase~i~~~i~~~r~~gKPVvas~ 403 (618)
T PRK10949 354 AQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSM 403 (618)
T ss_pred HHHHHHHhCCCCcEEEEEecCCCCcHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 3455544 357999999988878777656678888888888899999854
No 217
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=20.65 E-value=1.5e+02 Score=30.54 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=29.9
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGG 372 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~ 372 (659)
+.++.+++..++|+|+.+.. .. .+. ++...+.|+|+|...+...+.
T Consensus 47 ~~i~~l~~~~vDGiI~~s~~----~~-~~~----l~~~~~~~iPvV~~~~~~~~~ 92 (279)
T PF00532_consen 47 EYIELLLQRRVDGIILASSE----ND-DEE----LRRLIKSGIPVVLIDRYIDNP 92 (279)
T ss_dssp HHHHHHHHTTSSEEEEESSS----CT-CHH----HHHHHHTTSEEEEESS-SCTT
T ss_pred HHHHHHHhcCCCEEEEeccc----CC-hHH----HHHHHHcCCCEEEEEeccCCc
Confidence 35666677889999999543 11 112 334455699999999985544
No 218
>cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=20.60 E-value=2.2e+02 Score=29.08 Aligned_cols=44 Identities=7% Similarity=0.227 Sum_probs=30.2
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
+.++.+++.+++|||+.+.. +. ...+.++++.+.|+|||..-+.
T Consensus 46 ~~i~~~~~~~vdgiii~~~~----~~---~~~~~l~~l~~~~ipvV~~~~~ 89 (288)
T cd01538 46 SQIENMIAKGVDVLVIAPVD----GE---ALASAVEKAADAGIPVIAYDRL 89 (288)
T ss_pred HHHHHHHHcCCCEEEEecCC----hh---hHHHHHHHHHHCCCCEEEECCC
Confidence 35566677899999997521 11 2345566777889999988764
No 219
>KOG1709|consensus
Probab=20.46 E-value=75 Score=31.65 Aligned_cols=40 Identities=20% Similarity=0.052 Sum_probs=33.8
Q ss_pred HHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy9757 550 LRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGIN 589 (659)
Q Consensus 550 Ll~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad 589 (659)
|+++|+-.|..+....|+=.+|.++|+.+..+.|++.|+.
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 4678888888888888888888888888888888888874
No 220
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=20.29 E-value=2.1e+02 Score=28.52 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=30.8
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
..++.++..+++|||+...- +. ...+.++++.++|+|+|...+..
T Consensus 46 ~~l~~~~~~~vdgii~~~~~----~~---~~~~~i~~~~~~~ipvV~~~~~~ 90 (273)
T cd06305 46 DQIDQAIAQKVDAIIIQHGR----AE---VLKPWVKRALDAGIPVVAFDVDS 90 (273)
T ss_pred HHHHHHHHcCCCEEEEecCC----hh---hhHHHHHHHHHcCCCEEEecCCC
Confidence 35566667799999997531 11 23344667778999999887754
No 221
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=20.25 E-value=9.4e+02 Score=26.67 Aligned_cols=181 Identities=15% Similarity=0.273 Sum_probs=102.7
Q ss_pred HHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCC-cEE-EeccCCCCCCCCChHHHHHHHHHHHHcCCCCCeE
Q psy9757 163 KIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGK-PVI-VTGSQISIFQIRSDGVHNFIGALILAGNYDIPEV 240 (659)
Q Consensus 163 ~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~-pvv-~tga~~p~~~~~~Dg~~Nl~~a~~~a~~~~~~gv 240 (659)
.+.++|++.++ +| ...|+-|-.|+-++ .++....+. +-| |+- .++|+ -..||++|+-.-.+..
T Consensus 73 ~V~~Av~~~l~--~G--~~fg~Pte~Ei~~A-ell~~~~p~~e~vrfvn-------SGTEA---tmsAiRlARa~TgR~k 137 (432)
T COG0001 73 AVVEAVQEQLE--RG--LSFGAPTELEVELA-ELLIERVPSIEKVRFVN-------SGTEA---TMSAIRLARAYTGRDK 137 (432)
T ss_pred HHHHHHHHHHH--hc--CCCCCCCHHHHHHH-HHHHHhcCcccEEEEec-------chhHH---HHHHHHHHHHhhCCCe
Confidence 36666666554 35 67899998888766 333332221 322 332 23444 4689999988777889
Q ss_pred EEEeCCeeeecCceEeccCC-CCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcEEEEEeCCCCCHHH
Q psy9757 241 TVYFNHKLIRGNRTVKMSVK-EFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRIYPHISNHT 319 (659)
Q Consensus 241 ~v~~~~~i~~~~~~~k~~~~-~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~~pg~~~~~ 319 (659)
.|.|.|--|-..+..-+... ....|.+|..+ .. +......+.+ .|==|.+.
T Consensus 138 IikF~G~YHG~~D~~lv~agsg~~t~g~p~s~-----------------------Gv--p~~~a~~ti~---~~yND~~a 189 (432)
T COG0001 138 IIKFEGCYHGHSDSLLVKAGSGAATLGSPSSP-----------------------GV--PADVAKHTLV---LPYNDLEA 189 (432)
T ss_pred EEEEcCCCCCCccHHHhhcCcCcccCCCCCCC-----------------------CC--ChhhhccEEE---ecCCCHHH
Confidence 99999988766554333322 11222111110 01 1112222332 36667788
Q ss_pred HHHhHhC---CCcEEEEEec-CC-CCCCCCchHHHHHHHHHHh-CCCeEE----Ee-ccCCCCCcCCchhhhhhhhccc
Q psy9757 320 VRSFMQS---PMEGVILLTY-GS-GNFPSNRSDLIDELRLASD-RNVIIV----NC-SQCSRGGTSDTYEAGKILSGIG 387 (659)
Q Consensus 320 l~~~~~~---~~~giVl~~~-G~-G~~p~~~~~~~~~l~~a~~-~gi~vV----~~-sq~~~G~v~~~y~~g~~L~~~G 387 (659)
++.+++. .+.+|++|-. |. |-+|+ .+.+++.|++..+ .|...+ ++ .|...|+....|+-.-+|.-.|
T Consensus 190 l~~~~~~~g~~IAaVIvEPv~gn~g~i~p-~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG 267 (432)
T COG0001 190 LEEAFEEYGDDIAAVIVEPVAGNMGVVPP-EPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG 267 (432)
T ss_pred HHHHHHHcCCcEEEEEeccccCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh
Confidence 8888864 4889999988 33 34455 6689998887765 576554 12 4555555555555433444444
Done!