Query psy9757
Match_columns 659
No_of_seqs 514 out of 4931
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 18:48:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2him_A L-asparaginase 1; hydro 100.0 5.5E-79 1.9E-83 644.6 34.6 335 72-431 21-356 (358)
2 1wls_A L-asparaginase; structu 100.0 7.3E-77 2.5E-81 622.7 32.9 323 75-431 1-326 (328)
3 1zq1_A Glutamyl-tRNA(Gln) amid 100.0 2.2E-76 7.7E-81 635.0 34.8 331 70-432 87-430 (438)
4 2d6f_A Glutamyl-tRNA(Gln) amid 100.0 2.7E-76 9.4E-81 633.8 33.3 330 70-432 86-427 (435)
5 1nns_A L-asparaginase II; amid 100.0 1.4E-75 4.9E-80 613.1 32.8 318 74-423 1-325 (326)
6 2wlt_A L-asparaginase; hydrola 100.0 5.1E-75 1.8E-79 610.4 32.3 318 74-423 5-331 (332)
7 1wsa_A Asparaginase, asparagin 100.0 4.5E-75 1.6E-79 610.3 31.8 318 74-423 3-329 (330)
8 1agx_A Glutaminase-asparaginas 100.0 2.9E-74 1E-78 604.4 33.9 317 74-423 1-330 (331)
9 4pga_A Glutaminase-asparaginas 100.0 1.9E-74 6.6E-79 604.4 30.8 320 72-423 7-336 (337)
10 3nxk_A Cytoplasmic L-asparagin 100.0 3E-74 1E-78 601.4 30.5 320 71-423 5-333 (334)
11 1o7j_A L-asparaginase; atomic 100.0 1.2E-73 4E-78 598.9 33.1 314 73-423 3-326 (327)
12 2f8y_A Notch homolog 1, transl 100.0 2.2E-35 7.4E-40 293.0 23.5 206 452-657 12-218 (223)
13 3aji_A 26S proteasome non-ATPa 100.0 1.8E-35 6.2E-40 295.2 21.2 218 433-655 13-230 (231)
14 1oy3_D Transcription factor in 100.0 3E-35 1E-39 301.8 23.0 197 462-658 6-253 (282)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 4.7E-35 1.6E-39 297.6 23.4 217 436-657 33-250 (253)
16 2xai_A ASB-9, ankyrin repeat a 100.0 4.9E-34 1.7E-38 291.6 24.5 188 467-656 5-192 (261)
17 3b7b_A Euchromatic histone-lys 100.0 8E-34 2.7E-38 284.4 25.5 191 466-656 12-203 (237)
18 2rfa_A Transient receptor pote 100.0 2.8E-34 9.6E-39 287.0 21.0 192 465-656 3-223 (232)
19 1k1a_A B-cell lymphoma 3-encod 100.0 1.6E-33 5.3E-38 282.5 26.3 218 435-654 18-240 (241)
20 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-33 4.1E-38 298.6 26.8 197 462-658 55-308 (351)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 4E-34 1.4E-38 290.7 21.2 197 462-658 7-218 (253)
22 1wdy_A 2-5A-dependent ribonucl 100.0 4.6E-33 1.6E-37 285.1 29.1 218 435-658 48-281 (285)
23 3hra_A Ankyrin repeat family p 100.0 2.9E-33 9.8E-38 273.1 24.7 189 465-653 5-201 (201)
24 1wdy_A 2-5A-dependent ribonucl 100.0 4.5E-33 1.5E-37 285.1 27.0 219 435-658 14-248 (285)
25 3d9h_A CDNA FLJ77766, highly s 100.0 2.7E-33 9.1E-38 290.3 25.5 190 465-656 59-248 (285)
26 1k1a_A B-cell lymphoma 3-encod 100.0 5.2E-34 1.8E-38 285.9 19.4 197 462-658 6-211 (241)
27 3aji_A 26S proteasome non-ATPa 100.0 5E-33 1.7E-37 277.5 25.2 194 465-658 6-200 (231)
28 4b93_B Ankyrin repeat domain-c 100.0 2.2E-34 7.4E-39 296.5 15.0 193 463-655 50-244 (269)
29 2dzn_A Probable 26S proteasome 100.0 5.3E-33 1.8E-37 276.5 24.0 177 463-639 34-217 (228)
30 4gpm_A Engineered protein OR26 100.0 6.7E-33 2.3E-37 265.3 21.6 156 469-624 8-163 (169)
31 1ikn_D Protein (I-kappa-B-alph 100.0 2.5E-34 8.5E-39 288.6 11.6 196 462-657 5-211 (236)
32 4b93_B Ankyrin repeat domain-c 100.0 4.1E-33 1.4E-37 286.9 20.6 193 466-658 12-213 (269)
33 3ljn_A Hypothetical protein; a 100.0 2.9E-33 9.9E-38 299.5 19.4 214 434-655 28-269 (364)
34 2xai_A ASB-9, ankyrin repeat a 100.0 5.6E-33 1.9E-37 283.8 20.3 213 435-657 12-224 (261)
35 3kea_A K1L; tropism, ANK repea 100.0 2.1E-33 7.1E-38 291.3 17.2 195 461-658 27-223 (285)
36 4g8k_A 2-5A-dependent ribonucl 100.0 2.3E-32 8E-37 289.3 25.5 257 395-659 21-330 (337)
37 4gpm_A Engineered protein OR26 100.0 1.6E-32 5.5E-37 262.7 21.6 160 500-659 6-165 (169)
38 3b7b_A Euchromatic histone-lys 100.0 2.4E-32 8.1E-37 273.6 23.7 211 435-651 20-231 (237)
39 2etb_A Transient receptor pote 100.0 1.9E-33 6.7E-38 285.6 15.5 191 465-655 2-246 (256)
40 2dzn_A Probable 26S proteasome 100.0 1.2E-32 4E-37 273.9 20.3 194 465-658 2-203 (228)
41 2fo1_E LIN-12 protein; beta-ba 100.0 7.2E-33 2.4E-37 298.3 20.0 205 452-657 154-373 (373)
42 1s70_B 130 kDa myosin-binding 100.0 1.1E-32 3.9E-37 285.8 20.8 195 464-658 39-260 (299)
43 1n11_A Ankyrin; clathrin, BAND 100.0 5.5E-32 1.9E-36 296.6 26.6 186 466-651 213-398 (437)
44 3eu9_A Huntingtin-interacting 100.0 3.8E-32 1.3E-36 271.3 22.6 219 433-657 16-237 (240)
45 3d9h_A CDNA FLJ77766, highly s 100.0 2E-32 6.8E-37 283.8 20.1 212 435-656 68-280 (285)
46 1oy3_D Transcription factor in 100.0 3.7E-32 1.3E-36 278.8 20.9 204 435-642 18-270 (282)
47 2pnn_A Transient receptor pote 100.0 6.2E-33 2.1E-37 284.9 14.0 196 462-657 10-261 (273)
48 4g8k_A 2-5A-dependent ribonucl 100.0 6.7E-31 2.3E-35 278.1 28.5 221 433-658 32-301 (337)
49 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-31 5.9E-36 292.7 24.7 219 434-658 22-240 (437)
50 2f8y_A Notch homolog 1, transl 100.0 1.2E-31 4E-36 266.0 19.9 184 475-658 1-186 (223)
51 2fo1_E LIN-12 protein; beta-ba 100.0 3.2E-32 1.1E-36 293.3 16.9 202 457-658 117-341 (373)
52 3jxi_A Vanilloid receptor-rela 100.0 3.9E-32 1.3E-36 276.4 13.7 193 464-656 4-251 (260)
53 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-30 3.9E-35 275.8 25.1 196 463-658 22-275 (351)
54 3eu9_A Huntingtin-interacting 100.0 9.3E-31 3.2E-35 261.2 22.4 194 465-658 9-205 (240)
55 1s70_B 130 kDa myosin-binding 100.0 3.3E-31 1.1E-35 274.8 15.0 214 435-654 49-289 (299)
56 4hbd_A KN motif and ankyrin re 100.0 5.2E-31 1.8E-35 272.0 13.8 188 467-654 78-274 (276)
57 3kea_A K1L; tropism, ANK repea 100.0 2.3E-31 7.9E-36 275.8 10.8 207 435-657 40-248 (285)
58 2rfm_A Putative ankyrin repeat 100.0 3.3E-30 1.1E-34 250.3 17.7 163 491-653 28-190 (192)
59 3ljn_A Hypothetical protein; a 100.0 1.1E-30 3.6E-35 279.6 12.0 247 397-653 18-312 (364)
60 3v30_A DNA-binding protein rfx 100.0 7E-30 2.4E-34 243.3 16.2 168 466-633 3-171 (172)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.5E-29 1.2E-33 238.2 20.3 156 498-653 14-169 (169)
62 3v31_A Ankyrin repeat family A 100.0 1.6E-29 5.5E-34 239.6 17.7 159 497-655 2-160 (167)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.7E-29 5.7E-34 237.8 17.4 155 499-654 6-161 (162)
64 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.6E-29 1.2E-33 235.6 18.8 157 465-622 5-162 (162)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-28 3.9E-33 234.7 21.2 158 463-620 12-169 (169)
66 3v30_A DNA-binding protein rfx 100.0 8.1E-29 2.8E-33 235.9 16.8 159 498-656 2-161 (172)
67 1sw6_A Regulatory protein SWI6 100.0 1E-29 3.5E-34 268.8 11.3 193 440-641 107-327 (327)
68 3v31_A Ankyrin repeat family A 100.0 1.2E-28 4E-33 233.6 17.3 159 465-623 3-161 (167)
69 1awc_B Protein (GA binding pro 100.0 2.8E-28 9.5E-33 227.9 18.5 150 499-649 3-152 (153)
70 2rfm_A Putative ankyrin repeat 100.0 1.4E-28 4.7E-33 238.8 17.0 160 461-620 31-190 (192)
71 1sw6_A Regulatory protein SWI6 100.0 4.7E-29 1.6E-33 263.7 14.2 183 468-658 100-311 (327)
72 2rfa_A Transient receptor pote 100.0 4.7E-28 1.6E-32 241.7 20.6 160 497-656 2-184 (232)
73 3hra_A Ankyrin repeat family p 100.0 6.6E-28 2.3E-32 235.0 20.8 181 435-620 14-201 (201)
74 1ikn_D Protein (I-kappa-B-alph 100.0 4.1E-29 1.4E-33 250.5 12.3 179 462-640 42-229 (236)
75 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-28 4.4E-33 232.9 14.9 159 495-654 5-164 (165)
76 3f6q_A Integrin-linked protein 100.0 2.7E-28 9.2E-33 234.2 16.9 165 466-630 6-171 (179)
77 2pnn_A Transient receptor pote 100.0 5.9E-29 2E-33 255.2 12.8 200 435-635 22-272 (273)
78 3f6q_A Integrin-linked protein 100.0 3.6E-28 1.2E-32 233.3 16.6 162 496-657 3-165 (179)
79 1awc_B Protein (GA binding pro 100.0 1.5E-27 5.3E-32 222.8 19.9 150 466-616 3-152 (153)
80 2etb_A Transient receptor pote 100.0 9.4E-29 3.2E-33 251.0 12.1 188 435-623 11-247 (256)
81 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.4E-27 4.6E-32 223.5 18.2 152 499-652 3-155 (156)
82 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-27 4E-32 226.2 15.7 157 464-621 7-164 (165)
83 2vge_A RELA-associated inhibit 99.9 9.2E-31 3.1E-35 262.8 -7.1 184 462-648 18-206 (229)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.9E-27 2.7E-31 218.2 19.2 152 466-619 3-155 (156)
85 3jxi_A Vanilloid receptor-rela 99.9 8.5E-28 2.9E-32 244.3 12.9 189 435-624 14-252 (260)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.4E-28 1.1E-32 245.2 6.6 178 464-642 4-193 (239)
87 4hbd_A KN motif and ankyrin re 99.9 1.8E-26 6.2E-31 237.9 17.1 160 461-620 107-273 (276)
88 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.6E-27 8.8E-32 238.7 8.8 162 496-658 3-167 (239)
89 1d9s_A Cyclin-dependent kinase 99.9 5E-26 1.7E-30 208.5 13.3 133 489-622 3-136 (136)
90 1bi7_B P16INK4A, MTS1, multipl 99.9 3.4E-26 1.2E-30 214.7 11.7 145 492-637 6-151 (156)
91 1d9s_A Cyclin-dependent kinase 99.9 9.1E-26 3.1E-30 206.7 13.0 134 521-655 2-136 (136)
92 3t8k_A Uncharacterized protein 99.9 7.7E-26 2.6E-30 219.6 8.2 150 468-619 9-176 (186)
93 3t8k_A Uncharacterized protein 99.9 6E-26 2E-30 220.4 6.8 155 498-654 6-178 (186)
94 2vge_A RELA-associated inhibit 99.9 1.7E-26 5.9E-31 231.6 2.1 172 481-655 1-178 (229)
95 1bi7_B P16INK4A, MTS1, multipl 99.9 7.1E-25 2.4E-29 205.7 10.8 142 462-604 9-151 (156)
96 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.2E-24 2.8E-28 189.3 16.4 124 498-621 2-125 (126)
97 2jab_A H10-2-G3; HER2, darpin, 99.9 9.8E-24 3.4E-28 193.2 15.3 124 497-620 13-136 (136)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-23 7.3E-28 186.6 16.7 126 530-655 1-126 (126)
99 3deo_A Signal recognition part 99.9 3.6E-25 1.2E-29 213.5 4.2 140 495-652 41-181 (183)
100 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-23 6E-28 191.5 14.6 126 528-653 11-136 (136)
101 3c5r_A BARD-1, BRCA1-associate 99.9 3.5E-24 1.2E-28 196.2 9.3 133 522-655 2-134 (137)
102 2aja_A Ankyrin repeat family p 99.9 5.3E-26 1.8E-30 244.7 -3.4 181 466-654 93-343 (376)
103 3c5r_A BARD-1, BRCA1-associate 99.9 7.7E-24 2.6E-28 193.8 8.6 133 488-621 1-133 (137)
104 2aja_A Ankyrin repeat family p 99.9 3.8E-25 1.3E-29 238.0 -3.5 174 467-655 67-250 (376)
105 3ui2_A Signal recognition part 99.9 8.1E-23 2.8E-27 206.7 13.0 140 465-622 45-185 (244)
106 3deo_A Signal recognition part 99.9 2.7E-22 9.4E-27 193.3 13.6 137 465-619 44-181 (183)
107 3ui2_A Signal recognition part 99.9 1.5E-22 5E-27 204.8 12.0 161 472-653 22-183 (244)
108 3ehr_A Osteoclast-stimulating 99.9 5.6E-23 1.9E-27 204.0 7.8 134 496-629 71-205 (222)
109 2b0o_E UPLC1; arfgap, structur 99.9 4.2E-22 1.4E-26 208.1 12.8 122 467-588 153-283 (301)
110 2b0o_E UPLC1; arfgap, structur 99.9 3.2E-22 1.1E-26 209.0 11.8 141 497-643 150-299 (301)
111 3aaa_C Myotrophin, protein V-1 99.9 6.3E-22 2.2E-26 177.7 10.5 108 497-604 6-113 (123)
112 3aaa_C Myotrophin, protein V-1 99.9 6.8E-22 2.3E-26 177.5 10.4 118 528-645 4-121 (123)
113 3ehr_A Osteoclast-stimulating 99.9 2.8E-22 9.5E-27 199.0 7.9 132 527-658 69-201 (222)
114 3jue_A Arfgap with coiled-coil 99.8 1.5E-20 5E-25 201.6 13.9 160 495-654 196-363 (368)
115 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-20 8E-25 208.4 15.8 134 466-605 133-275 (497)
116 1dcq_A PYK2-associated protein 99.8 2.6E-20 9E-25 192.2 14.9 125 531-655 130-263 (278)
117 3lvq_E ARF-GAP with SH3 domain 99.8 5.7E-20 1.9E-24 205.3 18.4 139 498-636 132-279 (497)
118 3jue_A Arfgap with coiled-coil 99.8 3.3E-20 1.1E-24 198.8 15.0 160 464-623 198-365 (368)
119 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.7E-19 9.2E-24 152.3 12.9 90 498-587 2-91 (93)
120 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.6E-19 8.8E-24 152.4 12.7 92 564-655 2-93 (93)
121 1dcq_A PYK2-associated protein 99.8 4E-19 1.4E-23 183.4 16.0 121 468-588 133-262 (278)
122 2l6b_A NR1C; ankyrin, consensu 99.8 1.9E-19 6.4E-24 159.3 8.7 107 494-600 5-111 (115)
123 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-19 8.7E-24 158.4 7.7 109 526-634 4-112 (115)
124 2zgd_A 3 repeat synthetic anky 99.7 2.4E-16 8.3E-21 138.5 10.6 91 559-649 19-109 (110)
125 2zgd_A 3 repeat synthetic anky 99.7 3.1E-16 1.1E-20 137.8 10.8 88 495-582 21-108 (110)
126 4i6k_A Amidohydrolase family p 44.2 59 0.002 32.2 8.3 56 312-367 103-158 (294)
127 2csu_A 457AA long hypothetical 43.0 49 0.0017 35.4 7.8 51 155-208 350-409 (457)
128 3l49_A ABC sugar (ribose) tran 39.0 43 0.0015 32.5 6.2 59 306-371 36-98 (291)
129 3rot_A ABC sugar transporter, 38.0 34 0.0012 33.5 5.4 47 318-371 52-98 (297)
130 3m9w_A D-xylose-binding peripl 35.4 67 0.0023 31.6 7.1 59 306-371 33-95 (313)
131 3l6u_A ABC-type sugar transpor 35.2 69 0.0024 31.0 7.1 47 318-371 55-101 (293)
132 3tb6_A Arabinose metabolism tr 34.9 61 0.0021 31.4 6.6 49 319-371 63-111 (298)
133 3bq9_A Predicted rossmann fold 33.6 33 0.0011 36.6 4.3 37 174-210 245-286 (460)
134 1tjy_A Sugar transport protein 32.4 53 0.0018 32.6 5.7 44 319-369 52-95 (316)
135 4f2d_A L-arabinose isomerase; 31.9 42 0.0014 36.5 5.0 68 156-228 55-126 (500)
136 3uug_A Multiple sugar-binding 31.9 58 0.002 32.2 5.9 46 319-371 51-96 (330)
137 3g1w_A Sugar ABC transporter; 31.6 52 0.0018 32.2 5.4 46 319-371 53-98 (305)
138 4g26_A Pentatricopeptide repea 29.7 56 0.0019 35.3 5.7 140 469-617 33-198 (501)
139 8abp_A L-arabinose-binding pro 29.5 78 0.0027 30.8 6.4 42 319-367 49-90 (306)
140 3gbv_A Putative LACI-family tr 29.5 63 0.0022 31.4 5.7 60 305-371 42-106 (304)
141 3jy6_A Transcriptional regulat 29.3 2.6E+02 0.0087 26.5 10.1 69 157-233 48-119 (276)
142 2ioj_A Hypothetical protein AF 28.1 79 0.0027 27.5 5.4 50 310-367 56-106 (139)
143 3o74_A Fructose transport syst 26.6 76 0.0026 30.2 5.5 45 319-371 50-94 (272)
144 2ioy_A Periplasmic sugar-bindi 26.3 92 0.0031 30.0 6.2 45 319-370 49-93 (283)
145 2fvy_A D-galactose-binding per 25.5 1.9E+02 0.0064 27.9 8.4 56 307-369 35-94 (309)
146 2ffi_A 2-pyrone-4,6-dicarboxyl 24.9 84 0.0029 30.6 5.6 51 317-367 95-145 (288)
147 2h3h_A Sugar ABC transporter, 24.7 95 0.0033 30.5 6.0 45 319-370 49-93 (313)
148 1tv5_A Dhodehase, dihydroorota 23.4 1.7E+02 0.0058 31.1 7.8 31 152-184 304-334 (443)
149 2dri_A D-ribose-binding protei 23.1 93 0.0032 29.8 5.4 45 319-370 49-93 (271)
150 3jy6_A Transcriptional regulat 22.9 1.1E+02 0.0037 29.3 5.9 44 318-371 54-97 (276)
151 3ksm_A ABC-type sugar transpor 22.5 71 0.0024 30.4 4.4 45 319-370 50-95 (276)
152 3d02_A Putative LACI-type tran 22.0 1.5E+02 0.0052 28.6 6.8 47 318-371 52-99 (303)
153 1wek_A Hypothetical protein TT 21.4 72 0.0025 30.4 4.0 36 174-209 131-169 (217)
154 2x7x_A Sensor protein; transfe 21.3 1.5E+02 0.005 29.3 6.6 45 319-370 54-98 (325)
155 3k4h_A Putative transcriptiona 21.3 2.8E+02 0.0095 26.4 8.6 56 173-233 68-127 (292)
156 3fdb_A Beta C-S lyase, putativ 21.2 2.4E+02 0.0081 28.1 8.4 49 314-363 137-187 (377)
157 2fn9_A Ribose ABC transporter, 21.1 1.3E+02 0.0045 28.9 6.1 45 319-370 50-94 (290)
158 3kke_A LACI family transcripti 21.1 2.3E+02 0.0079 27.4 8.0 53 173-230 70-124 (303)
159 1gud_A ALBP, D-allose-binding 20.7 97 0.0033 30.0 5.0 43 319-368 51-93 (288)
No 1
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=100.00 E-value=5.5e-79 Score=644.59 Aligned_cols=335 Identities=47% Similarity=0.753 Sum_probs=288.3
Q ss_pred CCCCeEEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCC
Q psy9757 72 RLESKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLL 151 (659)
Q Consensus 72 ~~~~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (659)
.++|||+||+|||||+|+.++.| +.|.....+++++.+|++.... ...+++.++.+++
T Consensus 21 m~~~~I~vi~TGGTIa~~~~~~g-~~p~~~~~~~ll~~vp~l~~~~---------------------~~~i~~~~~~~li 78 (358)
T 2him_A 21 MQKKSIYVAYTGGTIGMQRSEQG-YIPVSGHLQRQLALMPEFHRPE---------------------MPDFTIHEYTPLM 78 (358)
T ss_dssp --CCEEEEEEEESGGGBCC------CBCTTHHHHHHTTCGGGGSTT---------------------SCEEEEEEEEEEE
T ss_pred CCCCcEEEEECCcccccccCCCC-cccCCcchHHHHHhCccccccC---------------------cceEEEEECCccC
Confidence 45789999999999999866544 7775444457777777653111 1135677887768
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHH
Q psy9757 152 DSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALIL 231 (659)
Q Consensus 152 dS~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~ 231 (659)
||++|||++|.+|++.|++.+++||||||||||||||||||||+|++.+++|||||||||||++.+++||+.||++||.+
T Consensus 79 dSs~mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 158 (358)
T 2him_A 79 DSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYV 158 (358)
T ss_dssp CGGGCCHHHHHHHHHHHHHHGGGCSEEEEECCSTTHHHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhcCCeEEEecCchHHHHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHHHH
Confidence 99999999999999999999989999999999999999999999999889999999999999999999999999999999
Q ss_pred HcCCCCCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEecccccccCCCCCccccCCCCCcEEEEEe
Q psy9757 232 AGNYDIPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVNMKSIFRSSTIKKFDVQSQLNLNVGILRI 311 (659)
Q Consensus 232 a~~~~~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~il~~ 311 (659)
|+++..+||+|||||+||+|+|++|+|+.+++||.|||+||||+++.++.+.+....+ .+..+|.+.....++|+|+++
T Consensus 159 A~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~daF~S~~~gplg~v~~~v~~~~~~~~~-~~~~~~~~~~~~~~~V~il~~ 237 (358)
T 2him_A 159 AANYPINEVTLFFNNRLYRGNRTAKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAP-HGEGELIVHPITPQPIGVVTI 237 (358)
T ss_dssp HHHSCCSSEEEEETTEEEEGGGCEECBTTSSSCEECTTSCCSEEESSSEEECCCCCCC-CCCSSCEECCCCCCCEEEEEC
T ss_pred HhCCCCCCeEEEECCEEeecCcEEEcccCCcccccCCCCCceEEEeceEEEecccccc-CCCCcccccccCCCcEEEEEe
Confidence 9998889999999999999999999999999999999999999998765544333222 233567766667899999999
Q ss_pred CCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cchhhhhhhhcccccc
Q psy9757 312 YPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVIN 390 (659)
Q Consensus 312 ~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~~~G~i~ 390 (659)
|||+++++++++++.|++|||||+||+||+|. .+++.++|++|.++|++||++|||..|.|. +.|+.|.+|.+.|+|+
T Consensus 238 ~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p~-~~~~~~~l~~a~~~Gi~VV~~Src~~G~v~~~~Y~~g~~l~~~GvI~ 316 (358)
T 2him_A 238 YPGISADVVRNFLRQPVKALILRSYGVGNAPQ-NKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIG 316 (358)
T ss_dssp CTTCCHHHHHHHTSSSCSEEEEEEBTTTBCCC-CHHHHHHHHHHHHTTCEEEEEESSSBCCCCCC-----CHHHHTTCEE
T ss_pred CCCCCHHHHHHHHhCCCCEEEEecCCCCCCCC-cHHHHHHHHHHHHCCCEEEEEcCCCCCCCCccchhhhhHHhhCCEEE
Confidence 99999999999999999999999999999994 458999999999999999999999999998 8999999999999999
Q ss_pred cCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCcc
Q psy9757 391 GYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431 (659)
Q Consensus 391 ~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~ 431 (659)
++||++++|++||+|+|++ ..+.++++++|.++++||++.
T Consensus 317 ~~dlt~ekAr~kL~~~L~~-~~~~~~i~~~f~~~l~gE~~~ 356 (358)
T 2him_A 317 GADMTVEATLTKLHYLLSQ-ELDTETIRKAMSQNLRGELTP 356 (358)
T ss_dssp CTTCCHHHHHHHHHHHHHS-SCCHHHHHHHHTSCSSSSSCC
T ss_pred CCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHHhhccCCcCC
Confidence 9999999999999999999 579999999999999999874
No 2
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=100.00 E-value=7.3e-77 Score=622.72 Aligned_cols=323 Identities=30% Similarity=0.458 Sum_probs=287.9
Q ss_pred CeEEEEecCCccccccCCCCccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCCCCC
Q psy9757 75 SKVLVLYTGGTIGMEDNEQGALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLLDSS 154 (659)
Q Consensus 75 ~~i~ii~TGGTI~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~dS~ 154 (659)
+||+||+|||||+|+.++. ++.|. ....++++ +|++.+. . .+++.++.+ +||+
T Consensus 1 m~I~vi~TGGTIa~~~~~~-g~~~~-~~~~~ll~-vp~l~~~---------------~--------~i~~~~~~~-idS~ 53 (328)
T 1wls_A 1 MRILILGMGGTIASVKGER-GYESA-LSVSKILK-LAGISSE---------------A--------KIEARDLMN-VDST 53 (328)
T ss_dssp CBEEEEEEECGGGEECCTT-SBEEC-CCHHHHHH-TTTTTSC---------------S--------BCCEEEEEE-ECGG
T ss_pred CeEEEEecCcccccccCCC-CCcCC-CCHHHHHh-CccccCC---------------c--------eEEEEEecC-CCCC
Confidence 3599999999999987654 45664 45788888 8877531 1 134567777 9999
Q ss_pred CCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHHHcC
Q psy9757 155 NMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALILAGN 234 (659)
Q Consensus 155 ~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~a~~ 234 (659)
+|||++|.+|++.|++.+++||||||||||||||||||||+|++.+++|||||||||||.+.+++||+.||.+|+.+|++
T Consensus 54 ~mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~ll~~~~kPVVlTGAqrP~~~~~sDg~~NL~~Av~~A~~ 133 (328)
T 1wls_A 54 LIQPSDWERLAKEIEKEVWEYDGIVITHGTDTMAYSASMLSFMLRNPPIPIVLTGSMLPITEKNSDAPFNLRTALEFVKL 133 (328)
T ss_dssp GCCHHHHHHHHHHHHHHTTTCSEEEEECCGGGHHHHHHHHHHHEESCSSEEEEECCSSCTTSSSCSHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHhccCCeEEEEcCCchHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHhC
Confidence 99999999999999999989999999999999999999999989899999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeeeeEEe--cccccccCCCCCccccCCCCCcEEEEEeC
Q psy9757 235 YDIPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLTIDVN--MKSIFRSSTIKKFDVQSQLNLNVGILRIY 312 (659)
Q Consensus 235 ~~~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~V~il~~~ 312 (659)
+.. ||+|||||+||+|+|++|+|+.+++||.|||+||||+++ .+.+. ... .+| ..+|.+.....++|+|+++|
T Consensus 134 ~~~-GV~V~fn~~i~~a~~v~K~~t~~~daF~S~~~gplg~~~-~v~~~~~~~~-~~~--~~~~~~~~~~~~~V~il~~~ 208 (328)
T 1wls_A 134 GIR-GIYIAFNGKVMLGVRASKIRSMGFDAFESINYPNVAEIK-DDKLRILHIP-DFY--GDEFFSDIKYEPKVLVIKLI 208 (328)
T ss_dssp TCC-EEEEEETTEEEEGGGEEECBSSSSCCEEECSSCCSEEEE-TTEEEECCCC-CCC--CSSCEECCCCCCCEEEEECC
T ss_pred CCC-CeEEEECCEEeecccEEEccCCCcccccCCCCCeeEEee-eEEEccccCC-CCC--CCcccccccCCCcEEEEEeC
Confidence 776 999999999999999999999999999999999999998 55443 221 111 24566666678999999999
Q ss_pred CCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cchhhhhhhhccccccc
Q psy9757 313 PHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTYEAGKILSGIGVING 391 (659)
Q Consensus 313 pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y~~g~~L~~~G~i~~ 391 (659)
||+++++++++++.|++|||||+||+||+|...+++.++|++|.++ ++||++|||..|.|. +.|++|..|.+.|++++
T Consensus 209 pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~~~~l~~a~~~-i~VV~~Sqc~~G~v~~~~Y~~g~~l~~~Gvi~~ 287 (328)
T 1wls_A 209 PGLSGDIVREALRLGYKGIILEGYGVGGIPYRGTDLFEVVSSISKR-IPVVLTTQAIYDGVDLQRYKVGRIALEAGVIPA 287 (328)
T ss_dssp TTCCTHHHHHHHHTTCSEEEEEESSSCCCCCSSSSHHHHHHHHTTT-SCEEEEESSSBSCCCTTTBHHHHHHHHTTCEEC
T ss_pred CCCCHHHHHHHHhCCCCEEEEeeeCCCCCCCCcHHHHHHHHHHhcC-CeEEEecCCCCCccCCccchhhhHHhhCCEEEC
Confidence 9999999999999999999999999999993234899999999999 999999999999998 89999999999999999
Q ss_pred CCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCcc
Q psy9757 392 YDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELST 431 (659)
Q Consensus 392 ~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~ 431 (659)
+||++++|++||+|+|+++ .+.++++++|.++++||++.
T Consensus 288 ~dlt~ekAr~kL~~~L~~~-~~~~~i~~~f~~~l~gE~~~ 326 (328)
T 1wls_A 288 GDMTKEATITKLMWILGHT-KNIEEVKQLMGKNITGELTR 326 (328)
T ss_dssp TTCCHHHHHHHHHHHTTTC-CCHHHHHHHHTSCSSSSSCC
T ss_pred CCCCHHHHHHHHHHHHcCC-CCHHHHHHHHHhhccCCccc
Confidence 9999999999999999995 79999999999999999874
No 3
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=100.00 E-value=2.2e-76 Score=634.99 Aligned_cols=331 Identities=31% Similarity=0.471 Sum_probs=294.8
Q ss_pred ccCCCCeEEEEecCCccccccCCC-CccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEec
Q psy9757 70 EDRLESKVLVLYTGGTIGMEDNEQ-GALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYT 148 (659)
Q Consensus 70 ~~~~~~~i~ii~TGGTI~~~~~~~-~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (659)
....||||+||+|||||||+.++. +++.|. ....++++.+|++.+. ..+++.++.
T Consensus 87 ~~~~m~kI~vi~TGGTIa~~~~~~~~g~~p~-~~~~~ll~~vP~l~~~-----------------------a~i~~~~~~ 142 (438)
T 1zq1_A 87 GKPGLPEVTIIGTGGTIASRIDYETGAVYPA-FTAEELAKALPEIFEV-----------------------ANVKPKLLF 142 (438)
T ss_dssp CCTTCCEEEEEECSCCCCEEEETTTTEEEEC-CCHHHHHHHCGGGGGT-----------------------SEEEEEECC
T ss_pred cCCCCCEEEEEECCccccccCCCCCCcccCC-CCHHHHHHhCcccccC-----------------------ceEEEEEec
Confidence 345578999999999999986543 667774 3478888888766421 135677888
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhc-CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHH
Q psy9757 149 PLLDSSNMCQVHWIKIANDIKEYYE-SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIG 227 (659)
Q Consensus 149 ~~~dS~~~~~~~~~~l~~~i~~~~~-~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~ 227 (659)
+ +||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++.+++|||||||||||++.+++||+.||.+
T Consensus 143 ~-idSs~mtp~~w~~La~~I~~~~~~~~DG~VItHGTDTMeeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~ 221 (438)
T 1zq1_A 143 N-IFSEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLIC 221 (438)
T ss_dssp C-CCGGGCCHHHHHHHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred c-CCcccCCHHHHHHHHHHHHHHhccCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHH
Confidence 7 99999999999999999999987 799999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHcCCCCCeEEEEeCCe-------eeecCceEeccCCCCCCCCCCCCcccEEEee--eeEEecccccccCCCC-Ccc
Q psy9757 228 ALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGL--TIDVNMKSIFRSSTIK-KFD 297 (659)
Q Consensus 228 a~~~a~~~~~~gv~v~~~~~-------i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~--~~~~~~~~~~~~~~~~-~~~ 297 (659)
|+.+|+++. +||+|||||+ ||+|+|++|+|+.+++||.||++||||+++. .+.+... ..++.. . +|.
T Consensus 222 Av~~A~~~~-~GV~Vvfn~~~~d~~~~I~~a~~v~K~~t~~~dAF~S~~~gpLg~v~~~~~v~~~~~-~~~~~~-~~~~~ 298 (438)
T 1zq1_A 222 SVRMATSEV-AEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRK-DYRKRS-DEEVE 298 (438)
T ss_dssp HHHHHTSSB-CSEEEEEESSSSSSCEEEEETTSEEECBSSCSTTEEECSSCCSEEECTTSCEEESCS-CCCBCC-CCCCE
T ss_pred HHHHHcCCC-CCeEEEECCccCCCceEEEEcccEEEccCCCcccccCCCCceeEEeccCceEEEccc-ccCCCC-CCccc
Confidence 999999854 4999999999 9999999999999999999999999999976 3443322 222322 3 566
Q ss_pred ccCCCCCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cc
Q psy9757 298 VQSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DT 376 (659)
Q Consensus 298 ~~~~~~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~ 376 (659)
+...+.++|+|+++|||+++++++++++.|++||||++||+||+|+ ++.++|++|.++|++||++|||..|.|. ..
T Consensus 299 ~~~~~~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sqc~~G~V~~~~ 375 (438)
T 1zq1_A 299 VDDKIEEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGTGLGHTPN---DIIPSIERAVEEGVAVCMTSQCIYGRVNLNV 375 (438)
T ss_dssp ECCCCCCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCCG---GGHHHHHHHHHTTCEEEEEESSSBSCCCCSS
T ss_pred ccccCCCcEEEEEECCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEeCCCCCCccCccc
Confidence 6667789999999999999999999999999999999999999997 8999999999999999999999999998 89
Q ss_pred hhhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCccc
Q psy9757 377 YEAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELSTD 432 (659)
Q Consensus 377 y~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~~ 432 (659)
|++|.+|.+.|+++++||++++|++||+|+|++ ..+.++++++|.++++||++..
T Consensus 376 Y~~g~~l~~~GvI~~~dltpekArikLm~~L~~-~~~~~ei~~~f~~~l~GE~t~~ 430 (438)
T 1zq1_A 376 YSTGRKLLKAGVIPCEDMLPETAYVKLMWVLGH-TQNLEEVRKMMLTNYAGEITPY 430 (438)
T ss_dssp SHHHHHHHHTTCEECTTCCHHHHHHHHHHHHTT-CCCHHHHHHHHHSCSSTTSCSS
T ss_pred chhhhHHhhCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHHhhccCccccc
Confidence 999999999999999999999999999999999 4799999999999999998853
No 4
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=100.00 E-value=2.7e-76 Score=633.80 Aligned_cols=330 Identities=31% Similarity=0.423 Sum_probs=292.3
Q ss_pred ccCCCCeEEEEecCCccccccCCC-CccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEec
Q psy9757 70 EDRLESKVLVLYTGGTIGMEDNEQ-GALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYT 148 (659)
Q Consensus 70 ~~~~~~~i~ii~TGGTI~~~~~~~-~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (659)
....||||+||+|||||||+.++. +++.|. ....++++.+|++.+. ..+++.++.
T Consensus 86 ~~~~m~kI~vi~TGGTIa~~~~~~~~g~~p~-~~~~~ll~~vP~l~~~-----------------------a~i~~~~~~ 141 (435)
T 2d6f_A 86 EDPELPDVSIISTGGTVASIIDYRTGAVHPA-FTADDLLRANPELLDI-----------------------ANIRGRAVF 141 (435)
T ss_dssp CCSSSCEEEEEESSCCCCCEECTTTSCEECC-CCTTHHHHHCGGGGGT-----------------------CEEECCCCC
T ss_pred cCCCCCEEEEEECCcccceeECCCCCccccC-CCHHHHHHhCcccccC-----------------------ceEEEEEcc
Confidence 345578999999999999986653 667774 3478888888766521 134566777
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhc-CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHH
Q psy9757 149 PLLDSSNMCQVHWIKIANDIKEYYE-SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIG 227 (659)
Q Consensus 149 ~~~dS~~~~~~~~~~l~~~i~~~~~-~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~ 227 (659)
+ +||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++ +++|||||||||||++.+++||+.||.+
T Consensus 142 ~-idSs~mtp~~w~~La~~I~~~~~~~~DG~VItHGTDTMeeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~ 219 (435)
T 2d6f_A 142 N-ILSENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQC 219 (435)
T ss_dssp C-CCGGGCCHHHHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHH
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHhccCCCeEEEEcCcchHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHH
Confidence 7 99999999999999999999987 7999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHcCCCCCeEEEEeCCe-------eeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCC-Cccc
Q psy9757 228 ALILAGNYDIPEVTVYFNHK-------LIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIK-KFDV 298 (659)
Q Consensus 228 a~~~a~~~~~~gv~v~~~~~-------i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~-~~~~ 298 (659)
|+.+|+++. +||+|||||+ ||+|+|++|+|+.+++||.||++||||+++.+ +.+.. ...++.. . +|.+
T Consensus 220 Av~~A~~~~-~GV~Vvfn~~~~d~~~~I~~a~~v~K~~t~~~dAF~S~~~gpLg~v~~~~v~~~~-~~~~~~~-~~~~~~ 296 (435)
T 2d6f_A 220 SVRAATSEI-AEVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIKILE-ENYRKRG-SDELEL 296 (435)
T ss_dssp HHHHHHSSC-CSEEEEEESSSSSSCEEEEEGGGEEECBSSCTTCEEESSSCCSEEEETTEECCCC-CCCCCST-TSCCEE
T ss_pred HHHHHcCCC-CCeEEEECCccCCCceEEEEcccEEEcccCCcccccCCCCceeEEecCCeEEEec-ccccCCC-CCcccc
Confidence 999999865 4999999999 99999999999999999999999999999763 33222 2222222 3 5666
Q ss_pred cCCCCCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcC-Cch
Q psy9757 299 QSQLNLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTS-DTY 377 (659)
Q Consensus 299 ~~~~~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~-~~y 377 (659)
...+.++|+|+++|||+++++++++++.|++||||++||+||+|+ ++.++|++|.++|++||++|||..|.|. ..|
T Consensus 297 ~~~~~~~V~il~~~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sqc~~G~V~~~~Y 373 (435)
T 2d6f_A 297 SDRVEERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGTGLGHCPD---TLIPVIGEAHDMGVPVAMTSQCLNGRVNMNVY 373 (435)
T ss_dssp CCCCCCCEEEEECCTTCCHHHHHHHHHTTCSEEEEEEBTTTBCCG---GGHHHHHHHHHTTCCEEEEETTCBSCCCTTSS
T ss_pred cccCCCcEEEEEECCCCCHHHHHHHHhCCCCEEEEecCCCCCcCH---HHHHHHHHHHhCCCEEEEeCCCCCCccCcccc
Confidence 666789999999999999999999999999999999999999997 8999999999999999999999999998 899
Q ss_pred hhhhhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhccccCCCccc
Q psy9757 378 EAGKILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMTNIRGELSTD 432 (659)
Q Consensus 378 ~~g~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l~gelt~~ 432 (659)
++|..|.+.|+++++||++++|++||+|+|++ ..+.++++++|.++++||++..
T Consensus 374 ~~g~~l~~~GvI~~~dltpekArikLm~~L~~-~~~~~ei~~~f~~~l~GE~t~~ 427 (435)
T 2d6f_A 374 STGRRLLQAGVIPCDDMLPEVAYVKMCWVLGQ-TDDPEMAREMMRENIAGEINER 427 (435)
T ss_dssp HHHHHHHHTTCEECTTCCHHHHHHHHHHHTTT-CCCHHHHHHHHHSCSSSCCCSS
T ss_pred hhhhHHhhCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHHhhccCccccc
Confidence 99999999999999999999999999999999 4799999999999999998853
No 5
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=100.00 E-value=1.4e-75 Score=613.11 Aligned_cols=318 Identities=24% Similarity=0.358 Sum_probs=276.8
Q ss_pred CCeEEEEecCCccccccCCCC--ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNEQG--ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLL 151 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (659)
+|||+||+|||||+|+.++.+ ++.+......++++.+|++.+. ..+++.++.+ +
T Consensus 1 ~~~I~ii~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~vp~l~~~-----------------------~~i~~~~~~~-i 56 (326)
T 1nns_A 1 LPNITILATGGTIAGGGDSATKSNYTVGKVGVENLVNAVPQLKDI-----------------------ANVKGEQVVN-I 56 (326)
T ss_dssp CCEEEEEEEESGGGCBCSCSSCCCCBSSCSCHHHHHHTCGGGGGT-----------------------CEEEEEEEEE-E
T ss_pred CCEEEEEeCCcccceeeCCCCCcccccCCCChHHHHHhCcccccc-----------------------ceEEEEEecc-C
Confidence 579999999999999866553 5566455688888887765421 1345667776 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHHHH
Q psy9757 152 DSSNMCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGALIL 231 (659)
Q Consensus 152 dS~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~~~ 231 (659)
||++|||++|.+|++.|++.++++|||||||||||||||||||+|++ +++|||||||||||++.+++||+.||++|+.+
T Consensus 57 dS~~mt~~~w~~la~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av~~ 135 (326)
T 1nns_A 57 GSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAVVT 135 (326)
T ss_dssp CGGGCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHhhcCCcEEEEcCchhHHHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHHHH
Confidence 99999999999999999999988899999999999999999999988 89999999999999999999999999999999
Q ss_pred HcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCC--CCcE
Q psy9757 232 AGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQL--NLNV 306 (659)
Q Consensus 232 a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~V 306 (659)
|+++. .+||+|||||+||+|+|++|+|+.+++||.|||+||||++..+ +.+.+....++....+|.++ .+ .++|
T Consensus 136 A~~~~~~~~GV~v~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~V 214 (326)
T 1nns_A 136 AADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVS-KLNELPKV 214 (326)
T ss_dssp HHCGGGTTSCSEEEETTEEEETTTEEECCSSCTTCEEETTTCCSEEEETTEEEECCCCCSCCGGGSCCCCT-TCSCCCCE
T ss_pred HcCcccCCCceEEEECCEEeeccceEEcccCCcCcccCCCCCeeEEEeCCEEEEecccccccCCCcceehh-hccCCCce
Confidence 99864 4699999999999999999999999999999999999999765 44433222221123445554 34 6899
Q ss_pred EEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhhcc
Q psy9757 307 GILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILSGI 386 (659)
Q Consensus 307 ~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~~~ 386 (659)
+|+++|||+++++++++++.|++|||||+||+||+|+ ++.++|++|.++|++||++|||..|.|.. +++..|.+.
T Consensus 215 ~il~~~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn~p~---~~~~~l~~a~~~gi~VV~~Sr~~~G~v~~--~~g~~l~~~ 289 (326)
T 1nns_A 215 GIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYK---SVFDTLATAAKTGTAVVRSSRVPTGATTQ--DAEVDDAKY 289 (326)
T ss_dssp EEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBCCH---HHHHHHHHHHHTTCEEEEEESSSSSCBCS--SSSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEECCCCCCCcCC--ChhhHHhcC
Confidence 9999999999999999999999999999999999996 89999999999999999999999999973 377889999
Q ss_pred cccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 387 GVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 387 G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
|+|+++||++++|++||+|+|+++ .+.++++++|.+
T Consensus 290 Gvi~~~dlt~ekAr~kL~~~L~~~-~~~~~i~~~f~~ 325 (326)
T 1nns_A 290 GFVASGTLNPQKARVLLQLALTQT-KDPQQIQQIFNQ 325 (326)
T ss_dssp TEEECBTCCHHHHHHHHHHHTTTC-CCHHHHHHHHTT
T ss_pred CEEECCCCCHHHHHHHHHHHHhCC-CCHHHHHHHHhh
Confidence 999999999999999999999994 789999998864
No 6
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=100.00 E-value=5.1e-75 Score=610.41 Aligned_cols=318 Identities=22% Similarity=0.315 Sum_probs=273.1
Q ss_pred CCeEEEEecCCccccccCCC--CccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNEQ--GALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLL 151 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~~--~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (659)
+|||+||+|||||+|+.++. +++.+......++++.+|++.+. ..+++.++.+ +
T Consensus 5 m~~I~vi~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~vp~l~~~-----------------------~~i~~~~~~~-i 60 (332)
T 2wlt_A 5 LPTIALLATGGTIAGSGVDASLGSYKSGELGVKELLKAIPSLNKI-----------------------ARIQGEQVSN-I 60 (332)
T ss_dssp CCEEEEEEEESGGGCBC--CTTSCCBTTCSCTTHHHHTCCSGGGT-----------------------CEEEEEEEEE-E
T ss_pred CCEEEEEECCcccccccCCCCCCCccCCCCCHHHHHHhCcccccc-----------------------ceEEEEEecc-C
Confidence 78999999999999986554 35555445678888888766421 1356677777 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhc--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHH
Q psy9757 152 DSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229 (659)
Q Consensus 152 dS~~~~~~~~~~l~~~i~~~~~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~ 229 (659)
||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++ +++|||||||||||.+.+++||+.||++|+
T Consensus 61 dS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 61 GSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVL-HSTKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCSSSHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 9999999999999999999985 5999999999999999999999988 489999999999999999999999999999
Q ss_pred HHHcCCCC--CeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCC--CC
Q psy9757 230 ILAGNYDI--PEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQL--NL 304 (659)
Q Consensus 230 ~~a~~~~~--~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~ 304 (659)
.+|+++.. +||+|||||+||+|+|++|+|+.+++||.|||+||||++..+ +.+.+....++....+|.++... .+
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFSVREVVKTHTTHVSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLP 219 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEETTTC-CCSSSCTTCCCCTTTCCSEEEETTEEEECCCCCSCCGGGCSCCGGGCCSSCC
T ss_pred HHHhCcccCCCeEEEEECCEEeeccceEEccCCCcccccCCCCCeeEEEECCEEEEecCcccccCCCCccchhhcccCCC
Confidence 99998753 699999999999999999999999999999999999999765 44433332222223455554433 68
Q ss_pred cEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhh
Q psy9757 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILS 384 (659)
Q Consensus 305 ~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~ 384 (659)
+|+|+++|||+++++++++++.|++|||||+||+||+|+ ++.++|++|.++|++||++|||..|.|...+ + .|.
T Consensus 220 ~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~~~g--~-~l~ 293 (332)
T 2wlt_A 220 KVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVSA---GFLKAMQEASQMGVVIVRSSRVGSGGVTSGE--I-DDK 293 (332)
T ss_dssp CEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCCH---HHHHHHHHHHHTTCEEEEEESSSSSCCCSSS--S-CHH
T ss_pred cEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEECCCCCCCcCcch--h-hhh
Confidence 999999999999999999999999999999999999996 8999999999999999999999999998543 3 788
Q ss_pred cccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 385 GIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 385 ~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
+.|+|+++||++++|++||+|+|++ ..+.++++++|.+
T Consensus 294 ~~Gvi~~~dlt~ekAr~kL~~~L~~-~~~~~~i~~~f~~ 331 (332)
T 2wlt_A 294 AYGFITSDNLNPQKARVLLQLALTK-TNDKAKIQEMFEE 331 (332)
T ss_dssp HHTCEECTTCCHHHHHHHHHHHHHH-CCCHHHHHHHHHH
T ss_pred cCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHhh
Confidence 9999999999999999999999999 4789999998863
No 7
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=100.00 E-value=4.5e-75 Score=610.32 Aligned_cols=318 Identities=23% Similarity=0.320 Sum_probs=272.1
Q ss_pred CCeEEEEecCCccccccCCCC--ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNEQG--ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPLL 151 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (659)
+|||+||+|||||+|+.++.+ ++.+......++++.+|++.+. ..+++.++.+ +
T Consensus 3 m~~I~vi~TGGTIa~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~~-----------------------~~i~~~~~~~-i 58 (330)
T 1wsa_A 3 KPQVTILATGGTIAGSGESSVKSSYSAGAVTVDKLLAAVPAINDL-----------------------ATIKGEQISS-I 58 (330)
T ss_dssp CCEEEEEESSSCSCC---------CCCSSHHHHHHHHHCGGGGGT-----------------------CEEEEEECCC-C
T ss_pred CCEEEEEECCCccccccCCCCCCCccCCCCCHHHHHHhCcccccc-----------------------ceEEEEEecc-C
Confidence 689999999999999866542 5555445678888887765421 1356677877 9
Q ss_pred CCCCCCHHHHHHHHHHHHHHhc--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHHH
Q psy9757 152 DSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGAL 229 (659)
Q Consensus 152 dS~~~~~~~~~~l~~~i~~~~~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a~ 229 (659)
||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++ +++|||||||||||++.+++||+.||++|+
T Consensus 59 dS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 59 GSQEMTGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTV-KSQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHHhccCCCCEEEEEcCcchHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 9999999999999999999985 5999999999999999999999988 589999999999999999999999999999
Q ss_pred HHHcCCCC--CeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCC--CC
Q psy9757 230 ILAGNYDI--PEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQL--NL 304 (659)
Q Consensus 230 ~~a~~~~~--~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~ 304 (659)
.+|+++.. +||+|||||+||+|+|++|+|+.+++||.|||+||||++..+ +.+.+....++....+|.++ .+ .+
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~ 216 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIHAAREATKLNTTAVNAFASPNTGKIGTVYYGKVEYFTQSVRPHTLASEFDIS-KIEELP 216 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEEETTTCEECCSSCTTCEECTTSCCSEEEETTEEEECCCCCSCCGGGCCCCCT-TCCSCC
T ss_pred HHHhCcccCCCeEEEEECCEEeeccceEECCcCCcCcccCCCCCeeEEEECCEEEEecCcccccCCCCcccHh-hcCCCC
Confidence 99998754 699999999999999999999999999999999999999765 44433322221223445544 34 68
Q ss_pred cEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhhhh
Q psy9757 305 NVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKILS 384 (659)
Q Consensus 305 ~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~L~ 384 (659)
+|+|+++|||+++++++++++.|++|||||+||+||+|+ ++.++|++|.++|++||++|||..|.|... ++..|.
T Consensus 217 ~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~gi~VV~~Sr~~~G~v~~~--~g~~l~ 291 (330)
T 1wsa_A 217 RVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGNGNPFP---LTQNALEKAAKSGVVVARSSRVGSGSTTQE--AEVDDK 291 (330)
T ss_dssp CEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBTTTBCCH---HHHHHHHHHHHTTCEEEEEESSSSSCBCSS--SSSCHH
T ss_pred ceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCCEEEEECCCCCCCcCcc--hhhHHh
Confidence 999999999999999999999999999999999999996 899999999999999999999999999732 778899
Q ss_pred cccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 385 GIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 385 ~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
+.|+|+++||++++|++||+|+|+++ .+.++++++|.+
T Consensus 292 ~~Gvi~~~dlt~ekAr~kL~~~L~~~-~~~~~i~~~f~~ 329 (330)
T 1wsa_A 292 KLGFVATESLNPQKARVLLMLALTKT-SDREAIQKIFST 329 (330)
T ss_dssp HHTEEECBSCCHHHHHHHHHHHHTTC-CCHHHHHHHHTT
T ss_pred cCCEEECCCCCHHHHHHHHHHHHhCC-CCHHHHHHHHhh
Confidence 99999999999999999999999994 789999998863
No 8
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=100.00 E-value=2.9e-74 Score=604.41 Aligned_cols=317 Identities=21% Similarity=0.296 Sum_probs=274.8
Q ss_pred CCeEEEEecCCccccccCCCC---ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecCC
Q psy9757 74 ESKVLVLYTGGTIGMEDNEQG---ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTPL 150 (659)
Q Consensus 74 ~~~i~ii~TGGTI~~~~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 150 (659)
||||+||+|||||+|+.++.+ ++.+......++++.+|++.+ ...+++.++.+
T Consensus 1 m~~I~ii~TGGTIa~~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~-----------------------~~~i~~~~~~~- 56 (331)
T 1agx_A 1 KNNVVIVATGGTIAGAGASSTNSATYSAAKVPVDALIKAVPQVND-----------------------LANITGIQALQ- 56 (331)
T ss_dssp CCEEEEEECBTTTSCCCSCSSCTTCCCCSCCCHHHHHTTSTTHHH-----------------------HSEEEEECCCC-
T ss_pred CCEEEEEECCcccceeeCCCCCcccccCCCCCHHHHHHhCccccc-----------------------cceEEEEEecc-
Confidence 579999999999999866552 454334557888888776542 01356677777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhc--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHHH
Q psy9757 151 LDSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIGA 228 (659)
Q Consensus 151 ~dS~~~~~~~~~~l~~~i~~~~~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~a 228 (659)
+||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++ +++|||||||||||++.+++||+.||++|
T Consensus 57 idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 57 VASESITDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVV-HTDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp BCGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHHHC-CCSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCcchHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 99999999999999999999985 5999999999999999999999988 48999999999999999999999999999
Q ss_pred HHHHcCCCC--CeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCC---
Q psy9757 229 LILAGNYDI--PEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQL--- 302 (659)
Q Consensus 229 ~~~a~~~~~--~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--- 302 (659)
+.+|+++.. +||+|||||+||+|+|++|+|+.+++||.| |+||||++..+ +.+.+....++....+|.++ .+
T Consensus 136 v~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S-~~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~ 213 (331)
T 1agx_A 136 VALASSNEAKNKGVMVLMNDSIFAARDVTKGINIHTHAFVS-QWGALGTLVEGKPYWFRSSVKKHTNNSEFNIE-KIQGD 213 (331)
T ss_dssp HHHHTCTTCTTSCEEEEETTEEEETTTCEECCSSSTTCEEC-SSCCSEEEETTEEEECCCCCSCCGGGCSCCTT-TCCSS
T ss_pred HHHHhCcCCCCCeEEEEECCEEeecCceEEccCCCcccccc-CCceeEEEeCCEEEEecCcccCCCCCCccchh-hcccc
Confidence 999999764 599999999999999999999999999999 99999999764 44443333222223446554 34
Q ss_pred -CCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHH-hCCCeEEEeccCCCCCcCCchhhh
Q psy9757 303 -NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLAS-DRNVIIVNCSQCSRGGTSDTYEAG 380 (659)
Q Consensus 303 -~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~-~~gi~vV~~sq~~~G~v~~~y~~g 380 (659)
.++|+|+++|||+++++++++++.|++|||||+||+||+|+ ++.++|++|. ++|+|||++|||..|.|.. .++
T Consensus 214 ~~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~~gi~VV~~Sr~~~G~v~~--~~g 288 (331)
T 1agx_A 214 ALPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGTGNGSMAN---YLVPEVRKLHDEQGLQIVRSSRVAQGFVLR--NAE 288 (331)
T ss_dssp SCCCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEBTTTBCCT---THHHHHHHHHHTTCCEEEEEESSCSSCBCT--TTS
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHcCCCEEEEECCCCCCCcCc--chh
Confidence 78999999999999999999999999999999999999997 8999999999 9999999999999999973 377
Q ss_pred hhhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 381 KILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 381 ~~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
..|.+.|+|+++||++++|++||+|+|++ ..+.++++++|.+
T Consensus 289 ~~l~~~Gvi~~~dlt~ekAr~kL~~~L~~-~~~~~~i~~~f~~ 330 (331)
T 1agx_A 289 QPDDKYGWIAAHDLNPQKARLLMALALTK-TNDAKEIQNMFWN 330 (331)
T ss_dssp SCHHHHTCEECBTCCHHHHHHHHHHHTTT-CCCHHHHHHHHTT
T ss_pred hHHhhCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHhh
Confidence 88999999999999999999999999999 4789999998864
No 9
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=100.00 E-value=1.9e-74 Score=604.40 Aligned_cols=320 Identities=22% Similarity=0.251 Sum_probs=277.1
Q ss_pred CCCCeEEEEecCCccccccCCCC---ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEec
Q psy9757 72 RLESKVLVLYTGGTIGMEDNEQG---ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYT 148 (659)
Q Consensus 72 ~~~~~i~ii~TGGTI~~~~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (659)
..+|||+||+|||||+|+.++.+ ++.+.....+++++.+|++.+. ..+++.++.
T Consensus 7 ~~~~~I~ii~TGGTIa~~~~~~~~~~gy~~~~~~~~~ll~~vp~l~~~-----------------------~~i~~~~~~ 63 (337)
T 4pga_A 7 QKLANVVILATGGTIAGAGASAANSATYQAAKVGVDKLIAGVPELADL-----------------------ANVRGEQVM 63 (337)
T ss_dssp -CCCEEEEEEEESGGGCEESSTTCSSSEESSCSCHHHHHHTCTTHHHH-----------------------CEEEEEEEE
T ss_pred CCCCeEEEEECCChhcccccCCCCcccccCCCccHHHHHHhCcccccc-----------------------ceEEEEEec
Confidence 45899999999999999865542 4544457789999988865421 134556666
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh--cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHH
Q psy9757 149 PLLDSSNMCQVHWIKIANDIKEYY--ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFI 226 (659)
Q Consensus 149 ~~~dS~~~~~~~~~~l~~~i~~~~--~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~ 226 (659)
+ +||++|||++|.+|++.|++.+ ++||||||||||||||||||||++++ +++|||||||||||.+.+++||+.||.
T Consensus 64 ~-idS~~mt~~~w~~la~~i~~~l~~~~~dGvVItHGTDTm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~ 141 (337)
T 4pga_A 64 Q-IASESITNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLVQ-KTDKPIVVVGSMRPGTAMSADGMLNLY 141 (337)
T ss_dssp E-ECGGGCCHHHHHHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHH
T ss_pred c-CCCCcCCHHHHHHHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHHHHc-CCCCCEEEeCCCCCCCCCCchhHHHHH
Confidence 5 9999999999999999999964 56999999999999999999999988 899999999999999999999999999
Q ss_pred HHHHHHcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccC-CC
Q psy9757 227 GALILAGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQS-QL 302 (659)
Q Consensus 227 ~a~~~a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 302 (659)
+|+.+|+++. .+||+|||||+||+|+|++|+|+.+++||.|| +||||+++.+ +.+.+....++....+|.++. ..
T Consensus 142 ~Av~~A~~~~a~~~GV~V~fn~~i~~a~~v~K~~t~~~daF~S~-~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 4pga_A 142 NAVAVASNKDSRGKGVLVTMNDEIQSGRDVSKSINIKTEAFKSA-WGPLGMVVEGKSYWFRLPAKRHTVNSEFDIKQISS 220 (337)
T ss_dssp HHHHHHTCGGGTTSCSEECCTTEEEETTTCEECBSSSTTCEECT-TCCSEEEETTEEEECCCCCSCCGGGCSCCGGGCSC
T ss_pred HHHHHHcccccCCCEEEEEECCEEEeeCcEEEccCCCcccccCC-CCceeEEEcCEEEEecCcccCCCCCcceecccccC
Confidence 9999999875 57999999999999999999999999999999 9999999875 433332222222223566554 36
Q ss_pred CCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC-CCCCcCCchhhhh
Q psy9757 303 NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC-SRGGTSDTYEAGK 381 (659)
Q Consensus 303 ~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~-~~G~v~~~y~~g~ 381 (659)
.++|+|+++|||+++++|+++++.|++|||||+||+||+|+ ++.++|++|.++|++||++||| ..|.|...|+.+
T Consensus 221 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sr~~~~G~v~~~y~~~- 296 (337)
T 4pga_A 221 LPQVDIAYSYGNVTDTAYKALAQNGAKALIHAGTGNGSVSS---RVVPALQQLRKNGTQIIRSSHVNQGGFVLRNAEQP- 296 (337)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTBCCT---TTHHHHHHHHHTTCEEEEEESCCSBCCCCTTTSSC-
T ss_pred CCCEEEEEECCCCCHHHHHHHHhcCCCEEEEEEeCCCCCCH---HHHHHHHHHHHCCCEEEEeccCCCCCccCcccccc-
Confidence 78999999999999999999999999999999999999998 7999999999999999999999 999999888765
Q ss_pred hhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 382 ILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 382 ~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
+.+.|+|+++||++++|++||||+|++ ..+.++++++|.+
T Consensus 297 -~~~~Gvi~~~dlt~ekArikL~~~L~~-~~~~~ei~~~f~~ 336 (337)
T 4pga_A 297 -DDKNDWVVAHDLNPEKARILAMVAMTK-TQDSKELQRIFWE 336 (337)
T ss_dssp -HHHHTCEECTTCCHHHHHHHHHHHTTT-CCCHHHHHHHHHH
T ss_pred -cccCCEEECCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHhh
Confidence 568899999999999999999999999 4789999999864
No 10
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3e-74 Score=601.43 Aligned_cols=320 Identities=26% Similarity=0.361 Sum_probs=273.8
Q ss_pred cCCCCeEEEEecCCccccccCCCC---ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEe
Q psy9757 71 DRLESKVLVLYTGGTIGMEDNEQG---ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEY 147 (659)
Q Consensus 71 ~~~~~~i~ii~TGGTI~~~~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (659)
...+|||+||+|||||+|+.++.+ ++.......+++++.+|++.+ ...+++.++
T Consensus 5 ~~~~~~I~ii~TGGTIa~~~~~~~~~~gy~~~~~~~~~ll~~vp~l~~-----------------------~~~i~~~~~ 61 (334)
T 3nxk_A 5 KKAKSRIAILGTGGTIAGFIDSTIATTGYAAGAIDIDVLIKAVPQIRD-----------------------LADISWEQI 61 (334)
T ss_dssp ---CCEEEEEEEECGGGCBCSCSSCCSSCBSSCSCHHHHTTTCTTHHH-----------------------HSEEEEEEE
T ss_pred ccCCCEEEEEECCchhcccccCCcCccCccCCCCCHHHHHHhCccccc-----------------------cceEEEEEe
Confidence 346789999999999999865432 342224568888888776542 113456677
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHh-cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHH
Q psy9757 148 TPLLDSSNMCQVHWIKIANDIKEYY-ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFI 226 (659)
Q Consensus 148 ~~~~dS~~~~~~~~~~l~~~i~~~~-~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~ 226 (659)
.+ +||++|||++|.+|++.|++.+ ++||||||||||||||||||||++++ +++|||||||||||.+.+++||+.||.
T Consensus 62 ~~-idS~~m~~~~~~~la~~i~~~~~~~~dGvVItHGTDTm~~TA~~L~~~l-~~~kPVVlTGa~rp~~~~~sDg~~NL~ 139 (334)
T 3nxk_A 62 AN-IDSSNMCDEIWLRLAKKIAKLFAEGIDGVVITHGTDTMEETAYFLNLTI-KSDKPVVLVGAMRPSTAISADGPKNLY 139 (334)
T ss_dssp EE-ECGGGCCHHHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHH
T ss_pred cc-cCcccCCHHHHHHHHHHHHHHhhcCCCeEEEECCCchHHHHHHHHHHHc-CCCCCEEEECCCCCCCCCCchHHHHHH
Confidence 65 9999999999999999999998 67999999999999999999999988 899999999999999999999999999
Q ss_pred HHHHHHcCCCC--CeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccC-CC
Q psy9757 227 GALILAGNYDI--PEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQS-QL 302 (659)
Q Consensus 227 ~a~~~a~~~~~--~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 302 (659)
+|+.+|+++.. +||+|||||+||+|++++|+|+.+++||.|||+||||++..+ +.+.+....++....+|.++. ..
T Consensus 140 ~Av~~A~~~~a~~~GV~v~f~~~i~~a~~v~K~~t~~~daF~S~n~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 219 (334)
T 3nxk_A 140 NAVALVVNKEAKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVIKAHTKNAPFDVSKLTS 219 (334)
T ss_dssp HHHHHHHSGGGTTSCSEEEETTEEEETTTCEECBSSCSSCEECTTTCCSEEEETTEEEECEEECSCCGGGSCCCCTTCSC
T ss_pred HHHHHHhCcccCCCeEEEEECCEEEecCcEEECccCCcccccCCCCCceeEEEcCEEEEecCcccCCCCCcceeccccCC
Confidence 99999998753 699999999999999999999999999999999999999764 433333332222233566544 35
Q ss_pred CCcEEEEEeCCC-CCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhh
Q psy9757 303 NLNVGILRIYPH-ISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGK 381 (659)
Q Consensus 303 ~~~V~il~~~pg-~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~ 381 (659)
.++|+|+++||| +++++++++++.|++|||||+||+||+|+ ++.++|++|.++|++||++|||..|.|.. +.
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Src~~G~V~~----~~ 292 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHK---NQKDVLKELLKKGLKVVVSSRVVAGCVAV----SD 292 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBTTTBCCH---HHHHHHHHHHTTTCEEEEEESSSBSCCCC----CH
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCcH---HHHHHHHHHHHCCCEEEEeCCCCCCccCc----cc
Confidence 789999999999 99999999999999999999999999997 89999999999999999999999999952 34
Q ss_pred hhhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 382 ILSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 382 ~L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
.+.+.|+|+++||++++|++||+|+|+++ .+.++++++|.+
T Consensus 293 ~l~~~Gvi~~~dlt~ekArikL~~~L~~~-~~~~~i~~~f~~ 333 (334)
T 3nxk_A 293 SDEKLGFISAEDLNPQKARVLLMLALTKT-SDPKKIQEYFLK 333 (334)
T ss_dssp HHHHHTEEECTTCCHHHHHHHHHHHTTTC-CCHHHHHHHHHH
T ss_pred ccccCCEEECCCCCHHHHHHHHHHHHhCC-CCHHHHHHHHhh
Confidence 56789999999999999999999999994 789999999874
No 11
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=100.00 E-value=1.2e-73 Score=598.94 Aligned_cols=314 Identities=22% Similarity=0.261 Sum_probs=270.1
Q ss_pred CCCeEEEEecCCccccccCCCC---ccccCCCchhhHHhhCCCCcccccccccccCCcccccccccccceeEEEEEEecC
Q psy9757 73 LESKVLVLYTGGTIGMEDNEQG---ALAPSSKPLTDKIRENPLLYDRHYDVCKTQDGNVLVLPRVKDTRRVLYKVVEYTP 149 (659)
Q Consensus 73 ~~~~i~ii~TGGTI~~~~~~~~---~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (659)
.+|||+||+|||||+|+.++.+ ++.+......++++.+|++.+. ..+++.++.+
T Consensus 3 ~m~~I~ii~TGGTIa~~~~~~~~~~g~~~~~~~~~~ll~~~p~l~~~-----------------------~~i~~~~~~~ 59 (327)
T 1o7j_A 3 KLPNIVILATGGTIAGSAATGTQTTGYKAGALGVDTLINAVPEVKKL-----------------------ANVKGEQFSN 59 (327)
T ss_dssp CCCEEEEEEEESGGGCCCSSTTCCSSCCSSCSCHHHHHHHCGGGGGT-----------------------CEEEEEEEEE
T ss_pred CCCEEEEEECCcccccccCCCCCcccccCCCCCHHHHHHhCcccccc-----------------------ceEEEEEecc
Confidence 3789999999999999866552 4543345588899888766421 1356677777
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhc--CcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCCCCChHHHHHHH
Q psy9757 150 LLDSSNMCQVHWIKIANDIKEYYE--SYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQIRSDGVHNFIG 227 (659)
Q Consensus 150 ~~dS~~~~~~~~~~l~~~i~~~~~--~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~~~~Dg~~Nl~~ 227 (659)
+||++|||++|.+|++.|++.++ +||||||||||||||||||||+|++. ++|||||||||||++.+++||+.||++
T Consensus 60 -idS~~mt~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~ 137 (327)
T 1o7j_A 60 -MASENMTGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLE 137 (327)
T ss_dssp -ECGGGCCHHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred -CCcccCCHHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHH
Confidence 99999999999999999999985 59999999999999999999999885 899999999999999999999999999
Q ss_pred HHHHHcCCC--CCeEEEEeCCeeeecCceEeccCCCCCCCCCCCCcccEEEeee-eEEecccccccCCCCCccccCCC--
Q psy9757 228 ALILAGNYD--IPEVTVYFNHKLIRGNRTVKMSVKEFDAFDSPNFPNLAKVGLT-IDVNMKSIFRSSTIKKFDVQSQL-- 302 (659)
Q Consensus 228 a~~~a~~~~--~~gv~v~~~~~i~~~~~~~k~~~~~~~aF~sp~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 302 (659)
|+.+|+++. .+||+|||||+||+|+|++|+|+.+++||.|||+||||++..+ +.+.+....++....+|.++ .+
T Consensus 138 Av~~A~~~~~~~~GV~V~fn~~i~~a~~v~K~~t~~~~aF~S~~~gplg~v~~~~v~~~~~~~~~~~~~~~~~~~-~~~~ 216 (327)
T 1o7j_A 138 AVRVAGDKQSRGRGVMVVINDRIGSARYITKTNASTLDTFRANEEGYLGVIIGNRIYYQNRIDKLHTTRSVFDVR-GLTS 216 (327)
T ss_dssp HHHHHHCGGGTTSCCEEEETTEEEETTTCEECBSSCTTCEECTTTCCSEEEETTEEEECEEESSCCGGGCCCCCT-TCSC
T ss_pred HHHHHhCcCCCCCceEEEECCEEeecCceEEccCCCcccccCCCCCeeEEEECCEEEEecCcccccCCCCccchh-hcCC
Confidence 999999875 3699999999999999999999999999999999999999765 44443333222223455554 34
Q ss_pred CCcEEEEEeCCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCCCcCCchhhhhh
Q psy9757 303 NLNVGILRIYPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRGGTSDTYEAGKI 382 (659)
Q Consensus 303 ~~~V~il~~~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G~v~~~y~~g~~ 382 (659)
.++|+|+++|||+++++++++++.|++|||||+||+||+|+ ++.++|++|.++|++||++|||..|.|... + .
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~~~---g-~ 289 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGSVSV---RGIAGMRKALEKGVVVMRSTRTGNGIVPPD---E-E 289 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTBCCH---HHHHHHHHHHHTTCEEEEEESSSBSCBCCC---T-T
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCCCCH---HHHHHHHHHHHCCceEEEECCCCCCCcCCC---c-c
Confidence 68999999999999999999999999999999999999996 899999999999999999999999999742 3 4
Q ss_pred hhcccccccCCCCHHHHHHHHHHhhhcccchhhhhhhhhhc
Q psy9757 383 LSGIGVINGYDMTPEAALTKLSYVLSKSELTLQQKKDIMMT 423 (659)
Q Consensus 383 L~~~G~i~~~dmt~e~a~~kL~~~l~k~~~~~~~vk~l~~~ 423 (659)
|. + |+++||++++|++||+|+|++ ..+.++++++|.+
T Consensus 290 l~--~-i~~~dlt~ekAr~kL~~~L~~-~~~~~~i~~~f~~ 326 (327)
T 1o7j_A 290 LP--G-LVSDSLNPAHARILLMLALTR-TSDPKVIQEYFHT 326 (327)
T ss_dssp SS--S-EECBTCCHHHHHHHHHHHTTT-CCCHHHHHHHHHH
T ss_pred cc--c-ccCCCCCHHHHHHHHHHHHhC-CCCHHHHHHHHhh
Confidence 44 4 999999999999999999999 4789999998864
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.2e-35 Score=292.99 Aligned_cols=206 Identities=19% Similarity=0.177 Sum_probs=195.6
Q ss_pred cChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCccCCC
Q psy9757 452 SGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGV-SVHIRDNY 530 (659)
Q Consensus 452 ~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~ga-din~~d~~ 530 (659)
..+.+++...+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++++. +++.++..
T Consensus 12 ~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 91 (223)
T 2f8y_A 12 YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91 (223)
T ss_dssp ETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT
T ss_pred HcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 34455555545667889999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCH
Q psy9757 531 DISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNI 610 (659)
Q Consensus 531 g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~ 610 (659)
|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 611 ESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 611 ~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+++++|+++|++++.+|..|.|||++|++.++.+++++|+++|+...
T Consensus 172 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 172 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999754
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.8e-35 Score=295.19 Aligned_cols=218 Identities=23% Similarity=0.275 Sum_probs=200.5
Q ss_pred ccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHH
Q psy9757 433 AIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLD 512 (659)
Q Consensus 433 a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~ 512 (659)
++..++.+.++.+++. .... ....+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+
T Consensus 13 A~~~g~~~~v~~ll~~----~~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 87 (231)
T 3aji_A 13 LAYSGKLDELKERILA----DKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDE 87 (231)
T ss_dssp HHHHTCHHHHHHHHHH----CGGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHhCCHHHHHHHHHh----chhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHH
Confidence 3366667777666442 1222 2233455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q psy9757 513 IVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQ 592 (659)
Q Consensus 513 iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~ 592 (659)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 88 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 88 IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167 (231)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 593 VDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 593 ~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|.++|++
T Consensus 168 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999999999999999999999999999999999999999999999999999999998865
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3e-35 Score=301.83 Aligned_cols=197 Identities=19% Similarity=0.146 Sum_probs=187.3
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCC---cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGAD---ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEA 538 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~---vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~A 538 (659)
+..+.|+||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 45577899999999999999999999988 889999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCC-----------------------------------------------CCCCCCCCCcHHHHH
Q psy9757 539 VIADQHDIIRLLRHCGAH-----------------------------------------------LTNEPMFLGDVLTNA 571 (659)
Q Consensus 539 a~~g~~eivklLl~~ga~-----------------------------------------------~~~~~~~g~t~L~~A 571 (659)
+..|+.+++++|++++++ ++..+..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 999999999999998865 667788999999999
Q ss_pred HHcCCHHHHHHHHHcCCCcccCCCC-CChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 572 AARGMIKRLQSYLLAGINLNQVDSI-GLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 572 a~~g~~~~v~~Ll~~gad~n~~d~~-g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
+..|+.+++++|+++|++++..+.. |+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 166 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 9999999999999999999998854 999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCC
Q psy9757 651 SSETKSKV 658 (659)
Q Consensus 651 ~~ga~~~v 658 (659)
++|++++.
T Consensus 246 ~~ga~~~~ 253 (282)
T 1oy3_D 246 AHGAPEPE 253 (282)
T ss_dssp HTTCCCCC
T ss_pred HcCCCcCc
Confidence 99999764
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.7e-35 Score=297.64 Aligned_cols=217 Identities=18% Similarity=0.175 Sum_probs=187.1
Q ss_pred cchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHH
Q psy9757 436 NNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVK 515 (659)
Q Consensus 436 ~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~ 515 (659)
.+..++++.++ ..+.+++...+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++
T Consensus 33 ~~~~~~v~~Ll-----~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 107 (253)
T 1yyh_A 33 EDAPAVISDFI-----YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQ 107 (253)
T ss_dssp ------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCChHHHHHHH-----HccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 34555555553 3344555555566788999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC
Q psy9757 516 YCLENGV-SVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD 594 (659)
Q Consensus 516 ~LL~~ga-din~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d 594 (659)
+|++++. +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 187 (253)
T 1yyh_A 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 187 (253)
T ss_dssp HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999987 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
..|+||||+|+.+|+.+++++|+++|++++.+|..|+|||++|+++|+.+|+++|......+.
T Consensus 188 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~ 250 (253)
T 1yyh_A 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC------
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999998766543
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.9e-34 Score=291.63 Aligned_cols=188 Identities=24% Similarity=0.284 Sum_probs=91.1
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDI 546 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ei 546 (659)
|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 84 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDC 84 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred HHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCc
Q psy9757 547 IRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIE 626 (659)
Q Consensus 547 vklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~ 626 (659)
+++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.
T Consensus 85 v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~- 162 (261)
T 2xai_A 85 VNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ- 162 (261)
T ss_dssp HHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-
T ss_pred HHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-
Confidence 4444444444442 22344444444444444444444444444444444444444444444444444444444444442
Q ss_pred ccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 627 NKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 627 d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
+..|.||||+|+..++.+++++|+++|+++
T Consensus 163 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 163 GKGQDSPLHAVARTASEELACLLMDFGADT 192 (261)
T ss_dssp CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Confidence 444444444444444444444444444443
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8e-34 Score=284.37 Aligned_cols=191 Identities=21% Similarity=0.252 Sum_probs=95.3
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 91 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYE 91 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 34444455555555555555555444444444555555555555555555555555544444444555555555555555
Q ss_pred HHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 546 IIRLLRHCG-AHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 546 ivklLl~~g-a~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
++++|++++ .+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 92 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 92 VVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp HHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred HHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 555555444 4444444444555555555555555555555555544444445555555555555555555555555554
Q ss_pred CcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 625 IENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 625 ~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
.+|..|.||||+|++.++.+++++|+++|++.
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC
Confidence 44444555555555555555555555544443
No 18
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.8e-34 Score=286.97 Aligned_cols=192 Identities=20% Similarity=0.245 Sum_probs=182.9
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-----CccCCCCCCHHHHH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSV-----HIRDNYDISPLHEA 538 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadi-----n~~d~~g~TpL~~A 538 (659)
+.|+||+|+..|+.+++++|+++ |++++..|..|+||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 56899999999999999999998 9999999999999999999999999999999999887 67788999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHH
Q psy9757 539 VIADQHDIIRLLRHCGAHLTNEPM-------------FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 539 a~~g~~eivklLl~~ga~~~~~~~-------------~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa 605 (659)
+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~ 162 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILI 162 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999998765 7999999999999999999999999999999999999999999
Q ss_pred HcCCHHHH----HHHHHCCCCC------CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 606 LNNNIESV----RYLLSQHVDL------TIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 606 ~~g~~~iv----k~LL~~Gad~------~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
.+|+.+++ ++|+++|++. +.+|..|.||||+|++.|+.+++++|+++|+..
T Consensus 163 ~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 163 LQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp TCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred HcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999988 9999999998 589999999999999999999999999988654
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.6e-33 Score=282.46 Aligned_cols=218 Identities=20% Similarity=0.218 Sum_probs=164.3
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.+.++.+++.+. ..+.+++.. +..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 18 ~~g~~~~v~~Ll~~~~-~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 95 (241)
T 1k1a_A 18 VQGNLPAVHRLVNLFQ-QGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCL 95 (241)
T ss_dssp HTTCHHHHHHHHHHHH-HTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHHHH-hcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 6777777777776553 233333332 23455677888888888888888888888888788888888888888888888
Q ss_pred HHHHHCCC----CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy9757 515 KYCLENGV----SVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEP-MFLGDVLTNAAARGMIKRLQSYLLAGIN 589 (659)
Q Consensus 515 ~~LL~~ga----din~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll~~gad 589 (659)
++|++++. +++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 96 ~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 96 RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88887776 777777788888888888888888888888888887777 6778888888888888888888888888
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy9757 590 LNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSET 654 (659)
Q Consensus 590 ~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 654 (659)
++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|.++++
T Consensus 176 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 88888888888888888888888888888888888888888888888888888888888777664
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=298.61 Aligned_cols=197 Identities=23% Similarity=0.252 Sum_probs=184.2
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC------------------------------------------------------CCCCcH
Q psy9757 542 DQHDIIRLLRHCGAHLTNEP------------------------------------------------------MFLGDV 567 (659)
Q Consensus 542 g~~eivklLl~~ga~~~~~~------------------------------------------------------~~g~t~ 567 (659)
|+.+++++|+++|++++..+ ..+.||
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~ 214 (351)
T 3utm_A 135 NRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETA 214 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH
T ss_pred CCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH
Confidence 99999999999999987544 456789
Q ss_pred HHHHHHc---CCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHH
Q psy9757 568 LTNAAAR---GMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLND 644 (659)
Q Consensus 568 L~~Aa~~---g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~e 644 (659)
||+|+.. +..+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+..|+.+
T Consensus 215 L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~ 294 (351)
T 3utm_A 215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 294 (351)
T ss_dssp HHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 9999998 5589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC
Q psy9757 645 IIELLKSSETKSKV 658 (659)
Q Consensus 645 iv~~Ll~~ga~~~v 658 (659)
++++|+++|+++++
T Consensus 295 ~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 295 TCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999998764
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4e-34 Score=290.72 Aligned_cols=197 Identities=23% Similarity=0.234 Sum_probs=161.2
Q ss_pred ccCCcHHHHHHHHcC-------------CHHHHHHHHhcCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcc
Q psy9757 462 KILYPALFQSAVREG-------------DIDKIKEMQNYGADISM-TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIR 527 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g-------------~~~iv~~Ll~~ga~vn~-~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~ 527 (659)
+..+.|+||+|+..| +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 86 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQ 86 (253)
T ss_dssp ---------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 445678999999977 89999999999999865 4889999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHH
Q psy9757 528 DNYDISPLHEAVIADQHDIIRLLRHCGA-HLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVL 606 (659)
Q Consensus 528 d~~g~TpL~~Aa~~g~~eivklLl~~ga-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~ 606 (659)
|..|.||||+|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 87 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 166 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA 166 (253)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999987 899999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 607 NNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 607 ~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 167 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 167 VNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999999999999999999998764
No 22
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.6e-33 Score=285.05 Aligned_cols=218 Identities=21% Similarity=0.271 Sum_probs=202.0
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++.. +..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 48 ~~g~~~~v~~Ll~-----~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 121 (285)
T 1wdy_A 48 QMSREDIVELLLR-----HGADPVLR-KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121 (285)
T ss_dssp HTTCHHHHHHHHH-----TTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHH-----cCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH
Confidence 6677777777743 33444432 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCcc----------CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCC----HHH
Q psy9757 515 KYCLENGVSVHIR----------DNYDISPLHEAVIADQHDIIRLLRHC-GAHLTNEPMFLGDVLTNAAARGM----IKR 579 (659)
Q Consensus 515 ~~LL~~gadin~~----------d~~g~TpL~~Aa~~g~~eivklLl~~-ga~~~~~~~~g~t~L~~Aa~~g~----~~~ 579 (659)
++|+++|++++.. +..|.||||+|+..|+.+++++|+++ |++++..+..|.||||+|+..++ .++
T Consensus 122 ~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i 201 (285)
T 1wdy_A 122 KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201 (285)
T ss_dssp HHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHH
T ss_pred HHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHH
Confidence 9999999999887 78899999999999999999999998 99999999999999999999999 999
Q ss_pred HHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH-CCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 580 LQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS-QHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 580 v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+++|++.|++++.+|..|+||||+|+.+|+.+++++|++ +|++++.+|..|.||||+|++.++.+++++|+++|++++.
T Consensus 202 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999999999875
No 23
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-33 Score=273.09 Aligned_cols=189 Identities=22% Similarity=0.340 Sum_probs=182.3
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCC-CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGA-DISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga-~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
..++||.|+..|+.+.++.|++++. +++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 84 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGR 84 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 4568899999999999999999876 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccCCCCCChHHHHHHHcCC-----HHHHHHH
Q psy9757 544 HDIIRLLR-HCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAG-INLNQVDSIGLTPLHAAVLNNN-----IESVRYL 616 (659)
Q Consensus 544 ~eivklLl-~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-ad~n~~d~~g~TpLh~Aa~~g~-----~~ivk~L 616 (659)
.+++++|+ +.+++++..+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++ .+++++|
T Consensus 85 ~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~L 164 (201)
T 3hra_A 85 TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164 (201)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHH
Confidence 99999999 567899999999999999999999999999999999 9999999999999999999998 9999999
Q ss_pred HHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 617 LSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 617 L~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 165 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 165 MENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999999999999999999999987
No 24
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-33 Score=285.10 Aligned_cols=219 Identities=20% Similarity=0.275 Sum_probs=201.7
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++...+..+.++||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 14 ~~g~~~~v~~Ll~-----~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (285)
T 1wdy_A 14 QNEDVDLVQQLLE-----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLL 88 (285)
T ss_dssp HTTCHHHHHHHHH-----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HcCCHHHHHHHHH-----cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 4556666666633 34555555456677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHH
Q psy9757 515 KYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNE----------PMFLGDVLTNAAARGMIKRLQSYL 584 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~----------~~~g~t~L~~Aa~~g~~~~v~~Ll 584 (659)
++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+
T Consensus 89 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 168 (285)
T 1wdy_A 89 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168 (285)
T ss_dssp HHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999877 778999999999999999999999
Q ss_pred Hc-CCCcccCCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHh-CCCCCCC
Q psy9757 585 LA-GINLNQVDSIGLTPLHAAVLNNN----IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKS-SETKSKV 658 (659)
Q Consensus 585 ~~-gad~n~~d~~g~TpLh~Aa~~g~----~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~-~ga~~~v 658 (659)
+. |++++..|..|+||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++.+.
T Consensus 169 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~ 248 (285)
T 1wdy_A 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 248 (285)
T ss_dssp HTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTC
T ss_pred HhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccc
Confidence 97 99999999999999999999999 999999999999999999999999999999999999999999 8887653
No 25
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=290.35 Aligned_cols=190 Identities=24% Similarity=0.274 Sum_probs=96.3
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
+.|+||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~ 138 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 138 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHH
Confidence 33444555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+++++|+++|++++..+ .|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.+|+.+++++|+++|++++
T Consensus 139 ~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 139 DCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 55555555555444322 24555555555555555555555555555555555555555555555555555555555554
Q ss_pred CcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 625 IENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 625 ~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
. |..|.||||+|+..++.+++++|+++|++.
T Consensus 218 ~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~ 248 (285)
T 3d9h_A 218 Q-GKGQDSPLHAVVRTASEELACLLMDFGADT 248 (285)
T ss_dssp C-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred C-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 2 444555555555555555555555555443
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.2e-34 Score=285.93 Aligned_cols=197 Identities=22% Similarity=0.228 Sum_probs=189.3
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHh----cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQN----YGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHE 537 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~----~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~ 537 (659)
+..+.|+||+|+..|+.+++++|++ .|.+++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 4556789999999999999999997 799999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC-CCCChHHHHHHHcCCHHH
Q psy9757 538 AVIADQHDIIRLLRHCGA----HLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD-SIGLTPLHAAVLNNNIES 612 (659)
Q Consensus 538 Aa~~g~~eivklLl~~ga----~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d-~~g~TpLh~Aa~~g~~~i 612 (659)
|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|+.+|+.++
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 999999999999999998 888999999999999999999999999999999999998 889999999999999999
Q ss_pred HHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 613 VRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 613 vk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999999999998764
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5e-33 Score=277.46 Aligned_cols=194 Identities=26% Similarity=0.313 Sum_probs=186.9
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCC-CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGA-DISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga-~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
..++||.|+..|+.+.+++|++.+. .++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 4568999999999999999999764 467889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDL 623 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~ 623 (659)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 624 TIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 624 ~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus 166 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999998764
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=296.48 Aligned_cols=193 Identities=20% Similarity=0.287 Sum_probs=157.6
Q ss_pred cCCcHHHHHHHHcCCHH-HHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 463 ILYPALFQSAVREGDID-KIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~-iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
..+.++|+.|+..++.+ ++++|+++|+++|..|.+|+||||+|+..|+.+++++|++.|++++.++..|.||+|+|+..
T Consensus 50 ~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~ 129 (269)
T 4b93_B 50 PEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQ 129 (269)
T ss_dssp -------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcccccccc
Confidence 34567888898887764 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q psy9757 542 DQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHV 621 (659)
Q Consensus 542 g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Ga 621 (659)
++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+++|.++..|+||||+|+.+|+.+++++|+++|+
T Consensus 130 ~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga 209 (269)
T 4b93_B 130 GHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGA 209 (269)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcHHHHHHHcCc-HHHHHHHHhCCCC
Q psy9757 622 DLTIENKNGQSAIEVANQMQL-NDIIELLKSSETK 655 (659)
Q Consensus 622 d~~~~d~~G~TpL~~A~~~g~-~eiv~~Ll~~ga~ 655 (659)
+++.+|..|+||||+|+++++ .+++++|.+.++.
T Consensus 210 d~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 210 SVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred CCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 999999999999999998876 4566666555543
No 29
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.3e-33 Score=276.46 Aligned_cols=177 Identities=21% Similarity=0.204 Sum_probs=101.3
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhcC--CCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCccCCCCCCHHHH
Q psy9757 463 ILYPALFQSAVREGDIDKIKEMQNYG--ADISM-TDFDRRNILHTACSVGKLDIVKYCLENG--VSVHIRDNYDISPLHE 537 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~iv~~Ll~~g--a~vn~-~d~~g~TpLh~Aa~~g~~~iv~~LL~~g--adin~~d~~g~TpL~~ 537 (659)
..+.|+||+|+..|+.+++++|+++| ++++. .+..|+||||+|+..|+.+++++|+++| ++++.++..|.||||+
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~ 113 (228)
T 2dzn_A 34 QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHL 113 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHH
Confidence 33445555555555555555555555 33333 4455555555555555555555555555 5555555555555555
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 538 AVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAG-INLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 538 Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-ad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 114 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 193 (228)
T 2dzn_A 114 AVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL 193 (228)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555 55555555555555555555555555555
Q ss_pred H-HCCCCCCCcccCCCcHHHHHHH
Q psy9757 617 L-SQHVDLTIENKNGQSAIEVANQ 639 (659)
Q Consensus 617 L-~~Gad~~~~d~~G~TpL~~A~~ 639 (659)
+ ++|++++.+|..|.|||++|.+
T Consensus 194 l~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 194 VEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHhcCCCCCccCCCCCcHHHHHHH
Confidence 5 5555555555555555555543
No 30
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.7e-33 Score=265.27 Aligned_cols=156 Identities=29% Similarity=0.401 Sum_probs=88.3
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHH
Q psy9757 469 FQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIR 548 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivk 548 (659)
|+.||+.|+.++|++|+++|+++|.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHH
Confidence 44566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 549 LLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 549 lLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+|+++|+++|.++..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+++|+.+++++|+++|++++
T Consensus 88 ~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 88 LLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 6655555555555555555555555555555555555555555555555555555555555555555555555543
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.5e-34 Score=288.60 Aligned_cols=196 Identities=18% Similarity=0.132 Sum_probs=183.2
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCC----CcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGA----DISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHE 537 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga----~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~ 537 (659)
+..+.|+||+|+..|+.+++++|++.+. +++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 84 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL 84 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 3456789999999999999999998765 789999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCC-CCChHHHHHHHcCCH
Q psy9757 538 AVIADQHDIIRLLRHCGAH------LTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDS-IGLTPLHAAVLNNNI 610 (659)
Q Consensus 538 Aa~~g~~eivklLl~~ga~------~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~-~g~TpLh~Aa~~g~~ 610 (659)
|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.
T Consensus 85 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~ 164 (236)
T 1ikn_D 85 ACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNP 164 (236)
T ss_dssp HHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 9999999999999999986 456788899999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 611 ESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 611 ~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+++++|+++|++++.+|..|.||||+|+.+++.+++++|+++|+++.
T Consensus 165 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 165 DLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999999999999999999999999999999999999753
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-33 Score=286.92 Aligned_cols=193 Identities=22% Similarity=0.255 Sum_probs=158.3
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCC--------cccCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCCccCCCCCCHHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGAD--------ISMTDFDRRNILHTACSVGKL-DIVKYCLENGVSVHIRDNYDISPLH 536 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~--------vn~~d~~g~TpLh~Aa~~g~~-~iv~~LL~~gadin~~d~~g~TpL~ 536 (659)
.++|+.||..|+.++|++|+++|++ ++..+..+.||||+|+..++. .++++|++.|+++|.+|.+|+||||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 3678999999999999999998875 456678899999999988876 5889999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 537 EAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 537 ~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
+|+..|+.+++++|+++|++++..+..|.||++.|+..++.+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|
T Consensus 92 ~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~L 171 (269)
T 4b93_B 92 VAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALL 171 (269)
T ss_dssp HHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHH
T ss_pred HHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 617 LSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 617 L~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+++|++++.+|..|.||||+|+..|+.++|++|+++|++++.
T Consensus 172 l~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 172 LQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999999999999999999999865
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.9e-33 Score=299.46 Aligned_cols=214 Identities=16% Similarity=0.129 Sum_probs=194.8
Q ss_pred cccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy9757 434 IHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDI 513 (659)
Q Consensus 434 ~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~i 513 (659)
+..++.++++.+++ .+.+++.. +..+.|+||+|+..|+.+++++|+++|++++. .+|.||||+|+..|+.++
T Consensus 28 a~~g~~~~v~~Ll~-----~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~ 99 (364)
T 3ljn_A 28 ARKGQTDEVRRLIE-----TGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDL 99 (364)
T ss_dssp HHHTCHHHHHHHHH-----TTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHH-----cCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHH
Confidence 37777888777743 34455543 34567889999999999999999999996654 478999999999999999
Q ss_pred HHHHHHC----CCCCCc-----------------cCCCCCCHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q psy9757 514 VKYCLEN----GVSVHI-----------------RDNYDISPLHEAVIAD--QHDIIRLLRHCGAHLTNEPMFLGDVLTN 570 (659)
Q Consensus 514 v~~LL~~----gadin~-----------------~d~~g~TpL~~Aa~~g--~~eivklLl~~ga~~~~~~~~g~t~L~~ 570 (659)
+++|+++ |++++. ++..|.||||+|+..| +.+++++|+++|++++..+..|.||||+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 179 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMR 179 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 9999998 888777 8889999999999999 9999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCC-----cccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHH
Q psy9757 571 AAARGMIKRLQSYLLAGIN-----LNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDI 645 (659)
Q Consensus 571 Aa~~g~~~~v~~Ll~~gad-----~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ei 645 (659)
|+..|+.+++++|+++|++ +|..|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 180 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~ 259 (364)
T 3ljn_A 180 AMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLL 259 (364)
T ss_dssp HHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHH
T ss_pred HHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHH
Confidence 9999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCC
Q psy9757 646 IELLKSSETK 655 (659)
Q Consensus 646 v~~Ll~~ga~ 655 (659)
+++|+++|++
T Consensus 260 v~~Ll~~~~~ 269 (364)
T 3ljn_A 260 TKELLQKTDV 269 (364)
T ss_dssp HHHHHHHSCH
T ss_pred HHHHHHcCCc
Confidence 9999999865
No 34
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=283.76 Aligned_cols=213 Identities=21% Similarity=0.238 Sum_probs=191.3
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++.. +..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 12 ~~g~~~~v~~Ll~-----~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 85 (261)
T 2xai_A 12 IHGHQLSLRNLIS-----QGWAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCV 85 (261)
T ss_dssp HHTCHHHHHHHHH-----TTCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HcCCHHHHHHHHH-----CCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 5566666666643 23444443 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC
Q psy9757 515 KYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD 594 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d 594 (659)
++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|+++|. +
T Consensus 86 ~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~ 163 (261)
T 2xai_A 86 NLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G 163 (261)
T ss_dssp HHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-C
T ss_pred HHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-C
Confidence 999999999985 45699999999999999999999999999999999999999999999999999999999999995 8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.++ +++++|++++.++.
T Consensus 164 ~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 164 KGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPS 224 (261)
T ss_dssp BTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCC
T ss_pred CCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCcc
Confidence 89999999999999999999999999999999999999999999655 58999999887653
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.1e-33 Score=291.28 Aligned_cols=195 Identities=15% Similarity=0.091 Sum_probs=184.0
Q ss_pred hccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Q psy9757 461 KKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI 540 (659)
Q Consensus 461 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~ 540 (659)
.+..+.|+||+|+..|+.+++++|+++|++++.. +|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH
Confidence 3455678999999999999999999999999988 48999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFL-GDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g-~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
.|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|++.|++.... ..|+||||+|+.+|+.+++++|+++
T Consensus 105 ~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDY 183 (285)
T ss_dssp TTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHc
Confidence 999999999999999999999999 79999999999999999999999877333 2899999999999999999999999
Q ss_pred CCCCCCcccCCCcH-HHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 620 HVDLTIENKNGQSA-IEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 620 Gad~~~~d~~G~Tp-L~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
|++++.+|..|.|| ||+|+..++.+++++|+++|++++.
T Consensus 184 gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 184 MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999998 9999999999999999999999764
No 36
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.3e-32 Score=289.30 Aligned_cols=257 Identities=18% Similarity=0.183 Sum_probs=198.0
Q ss_pred CHHHHHHHHHHhhhcccchhhhhhhhhhccc----c----CCCcc-cccccchhhHHHHHHHHHhhc-------------
Q psy9757 395 TPEAALTKLSYVLSKSELTLQQKKDIMMTNI----R----GELST-DAIHNNELDLAAAVAKTLHLS------------- 452 (659)
Q Consensus 395 t~e~a~~kL~~~l~k~~~~~~~vk~l~~~~l----~----gelt~-~a~~~~~~~~i~~l~~~l~~~------------- 452 (659)
+.....+.|+.+..++ +.+.++.++.... . |.... .++..++.++++.+++.--..
T Consensus 21 ~~~~~~t~L~~Av~~g--~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~ 98 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNE--DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFIL 98 (337)
T ss_dssp CHHHHHHHHHHHHHTT--CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCCCCChHHHHHHHcC--CHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHH
Confidence 3444567788888774 5677777775321 1 11111 233777777777774421000
Q ss_pred ---------------ChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccC----------CCCCCcHHHHHHH
Q psy9757 453 ---------------GRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMT----------DFDRRNILHTACS 507 (659)
Q Consensus 453 ---------------~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~----------d~~g~TpLh~Aa~ 507 (659)
...+++. .+..+.|+||+|+..|+.+++++|+++|++++.. +..|.||||+|+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~-~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 99 AAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHhcccchhhHHhhhccchhhh-hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 0001111 2344567889999999999999999999888654 3468899999999
Q ss_pred cCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy9757 508 VGKLDIVKYCLE-NGVSVHIRDNYDISPLHEAVIADQ----HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQS 582 (659)
Q Consensus 508 ~g~~~iv~~LL~-~gadin~~d~~g~TpL~~Aa~~g~----~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~ 582 (659)
.|+.+++++||+ .|++++.+|..|.|+|+.++..++ .+++++|+++|++++.++..|+||||+|+..|+.+++++
T Consensus 178 ~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 999999999995 589999999999999998876544 457889999999999999999999999999999999999
Q ss_pred HHHc-CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy9757 583 YLLA-GINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKVH 659 (659)
Q Consensus 583 Ll~~-gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~vh 659 (659)
|++. |+++|.+|.+|+||||+|+++|+.++|++|+++|++++.+ +|||+|+++|+.++|++|+++||++++|
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 9984 7899999999999999999999999999999999988754 5999999999999999999999998875
No 37
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.6e-32 Score=262.66 Aligned_cols=160 Identities=28% Similarity=0.387 Sum_probs=151.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy9757 500 NILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKR 579 (659)
Q Consensus 500 TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~ 579 (659)
++|+.||+.|+.++|++||++|+|+|.+|..|+||||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCC
Q psy9757 580 LQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKVH 659 (659)
Q Consensus 580 v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~vh 659 (659)
+++|+++|+++|.+|.+|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+++|+.+++++|+++|++.+-|
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997654
No 38
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.4e-32 Score=273.63 Aligned_cols=211 Identities=22% Similarity=0.289 Sum_probs=192.9
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++..+ ..+.++||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++
T Consensus 20 ~~g~~~~v~~Ll~-----~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 93 (237)
T 3b7b_A 20 EAGHVDICHMLVQ-----AGANIDTCS-EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVV 93 (237)
T ss_dssp HHTCHHHHHHHHH-----TTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCcHHHHHHHHH-----cCCCcCccC-CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Confidence 5666777776643 344444433 3466799999999999999999999999999999999999999999999999
Q ss_pred HHHHHCC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 515 KYCLENG-VSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 515 ~~LL~~g-adin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
++|++++ .+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 94 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 173 (237)
T 3b7b_A 94 QYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173 (237)
T ss_dssp HHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCC
T ss_pred HHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHh
Q psy9757 594 DSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKS 651 (659)
Q Consensus 594 d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~ 651 (659)
|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+.+++.+.+..|++
T Consensus 174 ~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 174 NIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999866655543
No 39
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.9e-33 Score=285.61 Aligned_cols=191 Identities=20% Similarity=0.122 Sum_probs=179.4
Q ss_pred CcHHHHHHHHcCCHH----HHHHHHhcCCCccc----CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCcc------
Q psy9757 465 YPALFQSAVREGDID----KIKEMQNYGADISM----TDFDRRNILHTACSV---GKLDIVKYCLENGVSVHIR------ 527 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~----iv~~Ll~~ga~vn~----~d~~g~TpLh~Aa~~---g~~~iv~~LL~~gadin~~------ 527 (659)
+.|+||.|+..|+.+ ++++|+++|++++. .|..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 568999999999997 66777789999998 899999999999999 9999999999998877633
Q ss_pred -----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---c
Q psy9757 528 -----DNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMF-------------LGDVLTNAAARGMIKRLQSYLL---A 586 (659)
Q Consensus 528 -----d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~-------------g~t~L~~Aa~~g~~~~v~~Ll~---~ 586 (659)
|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++ .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 478999999999999999999999999999998876 9999999999999999999999 9
Q ss_pred CCCcccCCCCCChHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 587 GINLNQVDSIGLTPLHAAVL--NNNIE-------SVRYLLSQHVDL-------TIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 587 gad~n~~d~~g~TpLh~Aa~--~g~~~-------ivk~LL~~Gad~-------~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
|+++|.+|..|+||||+|+. +++.+ ++++|+++|+++ +.+|..|.||||+|+..|+.+++++|+
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999 88988 999999999999 899999999999999999999999999
Q ss_pred hCCCC
Q psy9757 651 SSETK 655 (659)
Q Consensus 651 ~~ga~ 655 (659)
++|++
T Consensus 242 ~~g~~ 246 (256)
T 2etb_A 242 QREFS 246 (256)
T ss_dssp HHHHH
T ss_pred hCCCC
Confidence 98764
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-32 Score=273.93 Aligned_cols=194 Identities=18% Similarity=0.176 Sum_probs=183.7
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCC--CCCCc-cCCCCCCHHHHHHH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISM-TDFDRRNILHTACSVGKLDIVKYCLENG--VSVHI-RDNYDISPLHEAVI 540 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~-~d~~g~TpLh~Aa~~g~~~iv~~LL~~g--adin~-~d~~g~TpL~~Aa~ 540 (659)
+.|+||+|+..|+.+++++|++++.++.. .+..|+||||+|+..|+.+++++|+++| .+++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 35789999999999999999999987654 8899999999999999999999999999 55655 78899999999999
Q ss_pred cCCHHHHHHHHHcC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 541 ADQHDIIRLLRHCG--AHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 541 ~g~~eivklLl~~g--a~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
.|+.+++++|+++| ++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCcccCCCcHHHHHHHcCcHHHHHHHH-hCCCCCCC
Q psy9757 619 QH-VDLTIENKNGQSAIEVANQMQLNDIIELLK-SSETKSKV 658 (659)
Q Consensus 619 ~G-ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll-~~ga~~~v 658 (659)
+| ++++.+|..|.||||+|+..|+.+++++|+ ++|++++.
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 99 999999999999999999999999999999 89998764
No 41
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-33 Score=298.35 Aligned_cols=205 Identities=19% Similarity=0.213 Sum_probs=189.0
Q ss_pred cChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCccC
Q psy9757 452 SGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENG---VSVHIRD 528 (659)
Q Consensus 452 ~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~g---adin~~d 528 (659)
..+.+++..+ ..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++++ ++++..|
T Consensus 154 ~~ga~vn~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 154 AAGADVNAMD-CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp HTCCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred hcCCCCcCCC-CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC
Confidence 4455555543 45668999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCCHHHHHHHcC---CHHHHHHHHHcCCCCCC--------CCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccCCCC
Q psy9757 529 NYDISPLHEAVIAD---QHDIIRLLRHCGAHLTN--------EPMFLGDVLTNAAARGMIKRLQSYLLAG-INLNQVDSI 596 (659)
Q Consensus 529 ~~g~TpL~~Aa~~g---~~eivklLl~~ga~~~~--------~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-ad~n~~d~~ 596 (659)
..|.||||+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+ +++|.+|..
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~ 312 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED 312 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC
Confidence 99999999999998 89999999999999886 5678999999999999999999999876 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 597 GLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 597 g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++++++.+
T Consensus 313 g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~e 373 (373)
T 2fo1_E 313 GKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373 (373)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcccC
Confidence 9999999999999999999999999999999999999999999999999999999998753
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=285.82 Aligned_cols=195 Identities=26% Similarity=0.354 Sum_probs=172.2
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 464 LYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
.+.++||.||..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCcc--------------------------cCCCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLL-AGINLN--------------------------QVDSI 596 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~gad~n--------------------------~~d~~ 596 (659)
.+++++|+++|++++..+..|.||||+|+..++.+++++++. .+.+++ ..+..
T Consensus 119 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 198 (299)
T 1s70_B 119 LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198 (299)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTT
T ss_pred HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCC
Confidence 999999999999999999999999999998888888887765 344432 35567
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 597 GLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 597 g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
|.||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999988754
No 43
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.5e-32 Score=296.56 Aligned_cols=186 Identities=18% Similarity=0.287 Sum_probs=103.2
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.++||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 292 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP 292 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy9757 546 IIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTI 625 (659)
Q Consensus 546 ivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~ 625 (659)
++++|+++|++++..+..|.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.
T Consensus 293 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 293 VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCCcHHHHHHHcCcHHHHHHHHh
Q psy9757 626 ENKNGQSAIEVANQMQLNDIIELLKS 651 (659)
Q Consensus 626 ~d~~G~TpL~~A~~~g~~eiv~~Ll~ 651 (659)
+|..|.|||++|++.|+.+++++|..
T Consensus 373 ~~~~g~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 373 VSSDGTTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp CCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 55555555555555555555555543
No 44
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=271.33 Aligned_cols=219 Identities=21% Similarity=0.166 Sum_probs=195.6
Q ss_pred ccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCC-CCCcHHHHHHHcCCH
Q psy9757 433 AIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDF-DRRNILHTACSVGKL 511 (659)
Q Consensus 433 a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~-~g~TpLh~Aa~~g~~ 511 (659)
++..++.+.++.+++ .+.+++.. +..+.++||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.
T Consensus 16 A~~~g~~~~~~~Ll~-----~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 16 ATQYGIYERCRELVE-----AGYDVRQP-DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp HHHTTCHHHHHHHHH-----TTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred HHHcCChHHHHHHHH-----cCCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 336667777777743 33444433 34466899999999999999999999999876654 499999999999999
Q ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCc
Q psy9757 512 DIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM-IKRLQSYLLAGINL 590 (659)
Q Consensus 512 ~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~-~~~v~~Ll~~gad~ 590 (659)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ .+++++|++.|+++
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999997776 89999999999999
Q ss_pred ccCCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 591 NQVDS-IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 591 n~~d~-~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
+..+. .|+||||+|+.+|+.+++++|+++|++++.+|..|.|||++|++.|+.+++++|++++++..
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99987 89999999999999999999999999999999999999999999999999999999998764
No 45
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=283.77 Aligned_cols=212 Identities=21% Similarity=0.233 Sum_probs=190.1
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++.. +..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 68 ~~g~~~~v~~Ll~-----~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v 141 (285)
T 3d9h_A 68 IHGHQLSLRNLIS-----QGWAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCV 141 (285)
T ss_dssp HTTCHHHHHHHHH-----TTCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HcCCHHHHHHHHH-----CCCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHH
Confidence 6667777777643 33444433 34567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC
Q psy9757 515 KYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD 594 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d 594 (659)
++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++. +
T Consensus 142 ~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~ 219 (285)
T 3d9h_A 142 NLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-G 219 (285)
T ss_dssp HHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-C
T ss_pred HHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-C
Confidence 99999999998654 599999999999999999999999999999999999999999999999999999999999995 8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhC-CCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSS-ETKS 656 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~-ga~~ 656 (659)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+ ++.+++++|+++ |++.
T Consensus 220 ~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 220 KGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASL 280 (285)
T ss_dssp BTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCC
Confidence 89999999999999999999999999999999999999999999 457999999997 6653
No 46
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.7e-32 Score=278.77 Aligned_cols=204 Identities=22% Similarity=0.195 Sum_probs=170.7
Q ss_pred ccchhhHHHHHHHHHhhcChhh-hhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQE-LNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDI 513 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~-~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~i 513 (659)
..++.++++.+++.-. ... ++ ..+..+.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++
T Consensus 18 ~~g~~~~v~~Ll~~g~---~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~ 93 (282)
T 1oy3_D 18 IHQHEPFLDFLLGFSA---GHEYLD-LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTC 93 (282)
T ss_dssp HTTCHHHHHHHHHHHT---TSGGGG-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHH
T ss_pred HcCCHHHHHHHHhcCC---Cccccc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcch
Confidence 5667777777755321 111 23 334556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCC-----------------------------------------------CCccCCCCCCHHHHHHHcCCHHH
Q psy9757 514 VKYCLENGVS-----------------------------------------------VHIRDNYDISPLHEAVIADQHDI 546 (659)
Q Consensus 514 v~~LL~~gad-----------------------------------------------in~~d~~g~TpL~~Aa~~g~~ei 546 (659)
+++|++++++ ++.++..|.||||+|+..|+.++
T Consensus 94 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 173 (282)
T 1oy3_D 94 ACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEM 173 (282)
T ss_dssp HHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred hHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHH
Confidence 9999998765 67788999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy9757 547 IRLLRHCGAHLTNEPMF-LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTI 625 (659)
Q Consensus 547 vklLl~~ga~~~~~~~~-g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~ 625 (659)
+++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.
T Consensus 174 v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 174 VRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPE 253 (282)
T ss_dssp HHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCC
T ss_pred HHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCc
Confidence 99999999999998854 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcHHHHHHHcCc
Q psy9757 626 ENKNGQSAIEVANQMQL 642 (659)
Q Consensus 626 ~d~~G~TpL~~A~~~g~ 642 (659)
+|..|.|||++|.....
T Consensus 254 ~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 254 DGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CC---------------
T ss_pred CCCcccccccccCCccc
Confidence 99999999999987643
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=6.2e-33 Score=284.86 Aligned_cols=196 Identities=17% Similarity=0.184 Sum_probs=177.1
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHh----cCCCcc----cCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCC------
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQN----YGADIS----MTDFDRRNILHTACSV---GKLDIVKYCLENGVSV------ 524 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~----~ga~vn----~~d~~g~TpLh~Aa~~---g~~~iv~~LL~~gadi------ 524 (659)
+..+.++||.|+..|+.++|+.|++ .+++++ ..+..|+||||+|+.. |+.+++++|+++|+++
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 4557799999999999999998887 566665 4578999999999987 9999999999998652
Q ss_pred -Cc----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCCcHHHHHHHcCCHHHHHHHHH
Q psy9757 525 -HI----RDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPM--------------FLGDVLTNAAARGMIKRLQSYLL 585 (659)
Q Consensus 525 -n~----~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~--------------~g~t~L~~Aa~~g~~~~v~~Ll~ 585 (659)
+. .|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 22 567899999999999999999999999999999887 79999999999999999999999
Q ss_pred ---cCCCcccCCCCCChHHHHHHHcCC---------HHHHHHHHHCCCCCC-------CcccCCCcHHHHHHHcCcHHHH
Q psy9757 586 ---AGINLNQVDSIGLTPLHAAVLNNN---------IESVRYLLSQHVDLT-------IENKNGQSAIEVANQMQLNDII 646 (659)
Q Consensus 586 ---~gad~n~~d~~g~TpLh~Aa~~g~---------~~ivk~LL~~Gad~~-------~~d~~G~TpL~~A~~~g~~eiv 646 (659)
.|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|.||||+|+..|+.+++
T Consensus 170 ~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 170 NSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 999999999999999999999998 899999999999996 5999999999999999999999
Q ss_pred HHHHhCCC-CCC
Q psy9757 647 ELLKSSET-KSK 657 (659)
Q Consensus 647 ~~Ll~~ga-~~~ 657 (659)
++|+++|+ ++.
T Consensus 250 ~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 250 AYILQREIHEPE 261 (273)
T ss_dssp HHHHHHHTC---
T ss_pred HHHHHCCCCCch
Confidence 99999999 454
No 48
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=6.7e-31 Score=278.08 Aligned_cols=221 Identities=23% Similarity=0.306 Sum_probs=199.5
Q ss_pred ccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHh--------------------------
Q psy9757 433 AIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQN-------------------------- 486 (659)
Q Consensus 433 a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~-------------------------- 486 (659)
++..++.++++.+++ .+.+++..++..+.||||+|+..|+.++|++|++
T Consensus 32 Av~~g~~~~V~~LL~-----~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 106 (337)
T 4g8k_A 32 AVQNEDVDLVQQLLE-----GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVK 106 (337)
T ss_dssp HHHTTCHHHHHHHHH-----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHcCCHHHHHHHHH-----CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccch
Confidence 557788888888854 3567776666667889999999999999999986
Q ss_pred -------cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcc----------CCCCCCHHHHHHHcCCHHHHHH
Q psy9757 487 -------YGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIR----------DNYDISPLHEAVIADQHDIIRL 549 (659)
Q Consensus 487 -------~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~----------d~~g~TpL~~Aa~~g~~eivkl 549 (659)
++++++..|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 107 ~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~ 186 (337)
T 4g8k_A 107 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 186 (337)
T ss_dssp HHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHH
T ss_pred hhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHH
Confidence 48999999999999999999999999999999999998764 4468999999999999999999
Q ss_pred HHH-cCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC-CCCC
Q psy9757 550 LRH-CGAHLTNEPMFLGDVLTNAAARGM----IKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ-HVDL 623 (659)
Q Consensus 550 Ll~-~ga~~~~~~~~g~t~L~~Aa~~g~----~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~-Gad~ 623 (659)
|++ .|++++..+..|.|+|+.++..+. .+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++. |+++
T Consensus 187 LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v 266 (337)
T 4g8k_A 187 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 266 (337)
T ss_dssp HHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT
T ss_pred HHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc
Confidence 996 599999999999999998886543 4688999999999999999999999999999999999999985 8999
Q ss_pred CCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 624 TIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 624 ~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+.+|..|+||||+|+++|+.++|++|+++|++++.
T Consensus 267 n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 267 NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999764
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=1.7e-31 Score=292.66 Aligned_cols=219 Identities=21% Similarity=0.220 Sum_probs=201.0
Q ss_pred cccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHH
Q psy9757 434 IHNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDI 513 (659)
Q Consensus 434 ~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~i 513 (659)
+..++.++++.+++ .+.+.+. .+..+.|+||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.++
T Consensus 22 a~~g~~~~v~~Ll~-----~g~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~ 95 (437)
T 1n11_A 22 SFMGHLPIVKNLLQ-----RGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNM 95 (437)
T ss_dssp HHHTCHHHHHHHHH-----TTCCSCC-SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHCCCHHHHHHHHH-----cCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 37788888888854 2344443 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 514 VKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 514 v~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
+++|+++|++++..+..|.||||+|+..|+.+++++|++++++.+..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 96 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 175 (437)
T 1n11_A 96 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA 175 (437)
T ss_dssp HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 594 DSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 594 d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
+..|+||||+|+.+|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 176 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 240 (437)
T 1n11_A 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA 240 (437)
T ss_dssp CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987653
No 50
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=1.2e-31 Score=265.99 Aligned_cols=184 Identities=23% Similarity=0.266 Sum_probs=174.8
Q ss_pred cCCHHHHHHHHhcCCCcccC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q psy9757 475 EGDIDKIKEMQNYGADISMT-DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHC 553 (659)
Q Consensus 475 ~g~~~iv~~Ll~~ga~vn~~-d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ 553 (659)
.|+.+++++|+++|++++.. |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 36788999999999999776 88999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCc
Q psy9757 554 GA-HLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQS 632 (659)
Q Consensus 554 ga-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~T 632 (659)
++ +++..+..+.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET 160 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcC
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 633 AIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 633 pL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
|||+|+..|+.+++++|+++|++++.
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999998764
No 51
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.98 E-value=3.2e-32 Score=293.28 Aligned_cols=202 Identities=17% Similarity=0.224 Sum_probs=189.1
Q ss_pred hhhhhccCCcHHHHHHHHcCCHHHHHHHH--------hcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC
Q psy9757 457 LNKLKKILYPALFQSAVREGDIDKIKEMQ--------NYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD 528 (659)
Q Consensus 457 ~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll--------~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d 528 (659)
++..+...+.|+||+|+..|+.+++++|+ ++|+++|..|..|+||||+|+..|+.+++++|+++|++++.++
T Consensus 117 ~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~ 196 (373)
T 2fo1_E 117 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN 196 (373)
T ss_dssp TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC
Confidence 34444456788999999999998888776 7899999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCccc--------CC
Q psy9757 529 NYDISPLHEAVIADQHDIIRLLRHCG---AHLTNEPMFLGDVLTNAAARG---MIKRLQSYLLAGINLNQ--------VD 594 (659)
Q Consensus 529 ~~g~TpL~~Aa~~g~~eivklLl~~g---a~~~~~~~~g~t~L~~Aa~~g---~~~~v~~Ll~~gad~n~--------~d 594 (659)
..|.||||+|+..|+.+++++|++++ ++++..+..|.||||+|+..+ +.+++++|++.|++++. .|
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 99999999999999999999999998 899999999999999999998 89999999999999886 67
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCC-CCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 595 SIGLTPLHAAVLNNNIESVRYLLSQH-VDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 595 ~~g~TpLh~Aa~~g~~~ivk~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
..|+||||+|+.+|+.+++++|++++ ++++.+|..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC
Confidence 79999999999999999999999876 99999999999999999999999999999999998764
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.9e-32 Score=276.41 Aligned_cols=193 Identities=20% Similarity=0.182 Sum_probs=175.4
Q ss_pred CCcHHHHHHHHcCCHHHHHH----HHhcCCCcccCC----CCCCcHHHHHH---HcCCHHHHHHHHHCCCC---------
Q psy9757 464 LYPALFQSAVREGDIDKIKE----MQNYGADISMTD----FDRRNILHTAC---SVGKLDIVKYCLENGVS--------- 523 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~----Ll~~ga~vn~~d----~~g~TpLh~Aa---~~g~~~iv~~LL~~gad--------- 523 (659)
...++||.|++.|+.+.++. |+++|++++..+ ..|+||||+|+ ..|+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 45688999999999995554 445999998776 67999999999 67999999999998744
Q ss_pred --CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHH--
Q psy9757 524 --VHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEP--------------MFLGDVLTNAAARGMIKRLQSYLL-- 585 (659)
Q Consensus 524 --in~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~--------------~~g~t~L~~Aa~~g~~~~v~~Ll~-- 585 (659)
++..|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44556689999999999999999999999999999988 689999999999999999999999
Q ss_pred -cCCCcccCCCCCChHHHHHHHcCC---------HHHHHHHHHCCCCC-------CCcccCCCcHHHHHHHcCcHHHHHH
Q psy9757 586 -AGINLNQVDSIGLTPLHAAVLNNN---------IESVRYLLSQHVDL-------TIENKNGQSAIEVANQMQLNDIIEL 648 (659)
Q Consensus 586 -~gad~n~~d~~g~TpLh~Aa~~g~---------~~ivk~LL~~Gad~-------~~~d~~G~TpL~~A~~~g~~eiv~~ 648 (659)
.|+++|.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+..|+.+++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999999888 79999999999998 6799999999999999999999999
Q ss_pred HHhCCCCC
Q psy9757 649 LKSSETKS 656 (659)
Q Consensus 649 Ll~~ga~~ 656 (659)
|+++|+.+
T Consensus 244 Ll~~g~~~ 251 (260)
T 3jxi_A 244 IIRREIAD 251 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHhCCCc
Confidence 99988653
No 53
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.1e-30 Score=275.81 Aligned_cols=196 Identities=23% Similarity=0.309 Sum_probs=184.3
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 463 ILYPALFQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
....++||.|+..|+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 3345789999999999999988875 899999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC---------------------------
Q psy9757 542 DQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD--------------------------- 594 (659)
Q Consensus 542 g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d--------------------------- 594 (659)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 102 g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~ 181 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS 181 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccH
Confidence 99999999999999999999999999999999999999999999999987654
Q ss_pred ---------------------------CCCChHHHHHHHc---CCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHH
Q psy9757 595 ---------------------------SIGLTPLHAAVLN---NNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLND 644 (659)
Q Consensus 595 ---------------------------~~g~TpLh~Aa~~---g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~e 644 (659)
..|+||||+|+.. +..+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~ 261 (351)
T 3utm_A 182 LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHND 261 (351)
T ss_dssp HHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHH
Confidence 4577999999999 5689999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC
Q psy9757 645 IIELLKSSETKSKV 658 (659)
Q Consensus 645 iv~~Ll~~ga~~~v 658 (659)
++++|+++|++.+.
T Consensus 262 ~v~~Ll~~ga~~n~ 275 (351)
T 3utm_A 262 VMEVLHKHGAKMNA 275 (351)
T ss_dssp HHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCC
Confidence 99999999998764
No 54
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=261.19 Aligned_cols=194 Identities=22% Similarity=0.277 Sum_probs=184.1
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD-NYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~g~ 543 (659)
+.++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 3457899999999999999999999999999999999999999999999999999999987655 459999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC-HHHHHHHHHCCCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN-IESVRYLLSQHVD 622 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~-~~ivk~LL~~Gad 622 (659)
.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++ .+++++|+++|++
T Consensus 89 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999997776 8999999999999
Q ss_pred CCCccc-CCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 623 LTIENK-NGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 623 ~~~~d~-~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
++..+. .|.||||+|+..|+.+++++|+++|++++.
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999997 899999999999999999999999998764
No 55
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=3.3e-31 Score=274.81 Aligned_cols=214 Identities=26% Similarity=0.309 Sum_probs=186.0
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.+.++.+++ .+.+++.. +..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 49 ~~g~~~~v~~Ll~-----~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v 122 (299)
T 1s70_B 49 SSGDTEEVLRLLE-----RGADINYA-NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122 (299)
T ss_dssp HHTCHHHHHHHHH-----HCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HcCCHHHHHHHHH-----cCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Confidence 5566666666643 23444443 34467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCC--------------------------CCCCCCCcH
Q psy9757 515 KYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHC-GAHLT--------------------------NEPMFLGDV 567 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~-ga~~~--------------------------~~~~~g~t~ 567 (659)
++|+++|++++..+..|.||||+|+..++.+++++|+.. +.+++ ..+..|.||
T Consensus 123 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~ 202 (299)
T 1s70_B 123 EYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTA 202 (299)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCH
T ss_pred HHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCH
Confidence 999999999999999999999999999999999877653 44432 356789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHH
Q psy9757 568 LTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIE 647 (659)
Q Consensus 568 L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~ 647 (659)
||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|++.....+.+
T Consensus 203 L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~ 282 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEE 282 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998766666666
Q ss_pred HHHhCCC
Q psy9757 648 LLKSSET 654 (659)
Q Consensus 648 ~Ll~~ga 654 (659)
++.+...
T Consensus 283 l~~~~~~ 289 (299)
T 1s70_B 283 LQKKQNL 289 (299)
T ss_dssp HHHHTTS
T ss_pred HHHHHhh
Confidence 6555443
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=5.2e-31 Score=272.03 Aligned_cols=188 Identities=20% Similarity=0.255 Sum_probs=179.5
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCC--cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCCHHHHHH----
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGAD--ISMTDFDRRNILHTACSVGKLDIVKYCLENGV-SVHIRDNYDISPLHEAV---- 539 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~--vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~ga-din~~d~~g~TpL~~Aa---- 539 (659)
+++|.|+..|+.+.++.|++.+.+ +|..|..|+||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 346789999999999999998766 89999999999999999999999999999998 99999999999999999
Q ss_pred -HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 540 -IADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 540 -~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
..++.+++++|++.|+..+..+..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy9757 619 -QHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSET 654 (659)
Q Consensus 619 -~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 654 (659)
+|++++.+|..|.||||+|+..|+.+++++|++++.
T Consensus 238 ~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 238 VPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp STTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred cCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 899999999999999999999999999999998753
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=2.3e-31 Score=275.85 Aligned_cols=207 Identities=16% Similarity=0.139 Sum_probs=187.3
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.++++.+++ .+.+++.. .+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 40 ~~g~~~~v~~Ll~-----~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v 111 (285)
T 3kea_A 40 ADNNVRLVCTLLN-----AGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTV 111 (285)
T ss_dssp HTTCHHHHHHHHH-----TTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHh-----CCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 6677777777743 34455443 367899999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCCCccCCCC-CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccC
Q psy9757 515 KYCLENGVSVHIRDNYD-ISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQV 593 (659)
Q Consensus 515 ~~LL~~gadin~~d~~g-~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~ 593 (659)
++|+++|++++.++..| .||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 112 ~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~ 190 (285)
T 3kea_A 112 KLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTN 190 (285)
T ss_dssp HHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTT
T ss_pred HHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcc
Confidence 99999999999999999 79999999999999999999999887433 28899999999999999999999999999999
Q ss_pred CCCCChH-HHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCC
Q psy9757 594 DSIGLTP-LHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSK 657 (659)
Q Consensus 594 d~~g~Tp-Lh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~ 657 (659)
|..|+|| ||+|+.+|+.+++++|+++|++++.+|. .|+..|+.+++++|+++|++.+
T Consensus 191 ~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 191 NSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp CCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCC
Confidence 9999998 9999999999999999999999999984 5678999999999999987643
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3.3e-30 Score=250.26 Aligned_cols=163 Identities=21% Similarity=0.183 Sum_probs=153.8
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q psy9757 491 ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTN 570 (659)
Q Consensus 491 vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~ 570 (659)
+|.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHH
Q psy9757 571 AAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLK 650 (659)
Q Consensus 571 Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll 650 (659)
|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hCC
Q psy9757 651 SSE 653 (659)
Q Consensus 651 ~~g 653 (659)
++|
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 865
No 59
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=1.1e-30 Score=279.57 Aligned_cols=247 Identities=16% Similarity=0.106 Sum_probs=206.6
Q ss_pred HHHHHHHHHhhhcccchhhhhhhhhhccc-------cCCCcc-cccccchhhHHHHHHHHHhhcChhhhhhhhccCCcHH
Q psy9757 397 EAALTKLSYVLSKSELTLQQKKDIMMTNI-------RGELST-DAIHNNELDLAAAVAKTLHLSGRQELNKLKKILYPAL 468 (659)
Q Consensus 397 e~a~~kL~~~l~k~~~~~~~vk~l~~~~l-------~gelt~-~a~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~ 468 (659)
....+.|+++...+ +.+.++.++.... .+.... .++..++.++++.+++.- .+. ....+.++
T Consensus 18 ~~g~t~L~~Aa~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~---~~~~g~t~ 87 (364)
T 3ljn_A 18 DENMEKIHVAARKG--QTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG-----EVH---SLWHGQKP 87 (364)
T ss_dssp HHHHHHHHHHHHHT--CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHC-----CCC---CCBTTBCH
T ss_pred CCCCCHHHHHHHcC--CHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCC-----CCc---cccCCCCH
Confidence 44567777777664 4555666655321 111111 133677788887775532 222 22356789
Q ss_pred HHHHHHcCCHHHHHHHHhc----CCCccc-----------------CCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCC
Q psy9757 469 FQSAVREGDIDKIKEMQNY----GADISM-----------------TDFDRRNILHTACSVG--KLDIVKYCLENGVSVH 525 (659)
Q Consensus 469 L~~Aa~~g~~~iv~~Ll~~----ga~vn~-----------------~d~~g~TpLh~Aa~~g--~~~iv~~LL~~gadin 525 (659)
||+|+..|+.+++++|+++ |++++. .+..|.||||+|+..| +.+++++|+++|++++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~ 167 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT 167 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc
Confidence 9999999999999999998 888877 8889999999999999 9999999999999999
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChH
Q psy9757 526 IRDNYDISPLHEAVIADQHDIIRLLRHCGAH-----LTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTP 600 (659)
Q Consensus 526 ~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~-----~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~Tp 600 (659)
.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|+++|.+|..|+||
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 247 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVP 247 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC------------cccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 601 LHAAVLNNNIESVRYLLSQHVDLTI------------ENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 601 Lh~Aa~~g~~~ivk~LL~~Gad~~~------------~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
||+|+.+|+.+++++|+++|++++. .+..++||+++|+..++.+.+..|+..+
T Consensus 248 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~ 312 (364)
T 3ljn_A 248 LYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312 (364)
T ss_dssp HHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHH
Confidence 9999999999999999999876532 5678899999999999887777776544
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=7e-30 Score=243.29 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=147.0
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCC-cccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGAD-ISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~-vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
.++||.|+..|+.+++++|++++.+ ++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 3568899999999999999998877 788888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcccCCCcH
Q psy9757 625 IENKNGQSA 633 (659)
Q Consensus 625 ~~d~~G~Tp 633 (659)
.++..|.||
T Consensus 163 ~~~~~~~~p 171 (172)
T 3v30_A 163 QSNLVPADP 171 (172)
T ss_dssp CC-------
T ss_pred cccCCCCCC
Confidence 888888776
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.5e-29 Score=238.23 Aligned_cols=156 Identities=27% Similarity=0.352 Sum_probs=101.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMI 577 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~ 577 (659)
+.|+||.|++.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 44566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 578 KRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 578 ~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 6666666666666666666777777777777777777777777777777777777777777777777777776654
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.6e-29 Score=239.56 Aligned_cols=159 Identities=23% Similarity=0.284 Sum_probs=125.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM 576 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~ 576 (659)
.|.||||.|+..|+.+++++|++.+++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 577 IKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 7777877777777887777888888888888888888888888888888888888888888888888888888776543
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.7e-29 Score=237.82 Aligned_cols=155 Identities=24% Similarity=0.345 Sum_probs=83.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy9757 499 RNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIK 578 (659)
Q Consensus 499 ~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~ 578 (659)
.||||.|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 84 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD 84 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 345555555555555555555555555555555555555444 5555555555555555555555555555555555555
Q ss_pred HHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC-CCCcccCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy9757 579 RLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD-LTIENKNGQSAIEVANQMQLNDIIELLKSSET 654 (659)
Q Consensus 579 ~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 654 (659)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.+|+.+++++|+++|+
T Consensus 85 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 85 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 55555555555555555555555555555555555555555555 35555555555555555555555555555555
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3.6e-29 Score=235.57 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=151.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
..++||.|+..|+.+++++|+++|++++..+..|+||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4578999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGIN-LNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad-~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+.+|+.+++++|+++|+|
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999998 599999999999999999999999999999986
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.1e-28 Score=234.71 Aligned_cols=158 Identities=26% Similarity=0.324 Sum_probs=152.5
Q ss_pred cCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 463 ILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 463 ~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
....++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 543 QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 543 ~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999876
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=8.1e-29 Score=235.91 Aligned_cols=159 Identities=25% Similarity=0.288 Sum_probs=153.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVS-VHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM 576 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gad-in~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~ 576 (659)
+.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 47899999999999999999999887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy9757 577 IKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKS 656 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~ 656 (659)
.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++++++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988753
No 67
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1e-29 Score=268.78 Aligned_cols=193 Identities=18% Similarity=0.129 Sum_probs=157.7
Q ss_pred hHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCC---HHHHHH
Q psy9757 440 DLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGK---LDIVKY 516 (659)
Q Consensus 440 ~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~---~~iv~~ 516 (659)
..++.+.+.+ ...+.+++...+..+.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+ .++++.
T Consensus 107 ~~~~~~~~~l-~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ 185 (327)
T 1sw6_A 107 SLLQEVNDAF-PNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEA 185 (327)
T ss_dssp HHHHHHHHHC-TTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHH
T ss_pred hhHHHHHHHH-HhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHH
Confidence 3344454444 455566666455667789999999999999999999999999999999999999999998 788888
Q ss_pred HHHCC-CCCCccCCCCCCHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCCCCCcHHHHH
Q psy9757 517 CLENG-VSVHIRDNYDISPLHEAVI----ADQHDIIRLLRHC--------------------GAHLTNEPMFLGDVLTNA 571 (659)
Q Consensus 517 LL~~g-adin~~d~~g~TpL~~Aa~----~g~~eivklLl~~--------------------ga~~~~~~~~g~t~L~~A 571 (659)
|++.+ ++++.+|..|+||||+|+. .|+.+++++|++. |++++..+..|.||||.|
T Consensus 186 ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a 265 (327)
T 1sw6_A 186 LLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILEN 265 (327)
T ss_dssp HHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHH
T ss_pred HHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHH
Confidence 88886 7899999999999999999 8999999999987 899999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcC
Q psy9757 572 AARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQ 641 (659)
Q Consensus 572 a~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g 641 (659)
+. +++|+++ ++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+++|
T Consensus 266 ~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 266 LD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 86 8899988 68889999999999999999999999999999999999999999999998764
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.2e-28 Score=233.59 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=154.4
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
+.|+||.|+..|+.+++++|++++.+++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDL 623 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~ 623 (659)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++.+.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987654
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.8e-28 Score=227.94 Aligned_cols=150 Identities=25% Similarity=0.292 Sum_probs=98.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy9757 499 RNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIK 578 (659)
Q Consensus 499 ~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~ 578 (659)
.|+||.|++.|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 355666666666666666666665554 3555666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHH
Q psy9757 579 RLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELL 649 (659)
Q Consensus 579 ~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~L 649 (659)
++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 66666666666666666677777777777777777777777777777777777777777777777777665
No 70
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.4e-28 Score=238.82 Aligned_cols=160 Identities=18% Similarity=0.187 Sum_probs=155.0
Q ss_pred hccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Q psy9757 461 KKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI 540 (659)
Q Consensus 461 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~ 540 (659)
.+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
No 71
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=4.7e-29 Score=263.73 Aligned_cols=183 Identities=16% Similarity=0.160 Sum_probs=158.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC---
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADISM-TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ--- 543 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~vn~-~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~--- 543 (659)
.+|.|+..+..+++++|+++|+++|. .|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccccc
Confidence 45778888889999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHcC-CCCCCCCCCCCcHHHHHHH----cCCHHHHHHHHHc--------------------CCCcccCCCCCC
Q psy9757 544 HDIIRLLRHCG-AHLTNEPMFLGDVLTNAAA----RGMIKRLQSYLLA--------------------GINLNQVDSIGL 598 (659)
Q Consensus 544 ~eivklLl~~g-a~~~~~~~~g~t~L~~Aa~----~g~~~~v~~Ll~~--------------------gad~n~~d~~g~ 598 (659)
.++++.|++.+ ++++..+..|+||||+|+. .|+.+++++|++. |++++.++..|+
T Consensus 180 ~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~ 259 (327)
T 1sw6_A 180 SGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK 259 (327)
T ss_dssp TTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------
T ss_pred HHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCC
Confidence 68888888886 7899999999999999999 8999999999987 899999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 599 TPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 599 TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
||||.|+. +++|+++ +++.+|..|+||||+|+.+|+.+++++|+++|++++.
T Consensus 260 t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 260 DSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred ChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999985 9999998 6889999999999999999999999999999999865
No 72
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=4.7e-28 Score=241.71 Aligned_cols=160 Identities=20% Similarity=0.209 Sum_probs=153.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-----CCCCCCCCcHHHH
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHL-----TNEPMFLGDVLTN 570 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~-----~~~~~~g~t~L~~ 570 (659)
.|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999998 9999999999999999999999999999999999987 6677899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccCCC-------------CCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHH
Q psy9757 571 AAARGMIKRLQSYLLAGINLNQVDS-------------IGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVA 637 (659)
Q Consensus 571 Aa~~g~~~~v~~Ll~~gad~n~~d~-------------~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A 637 (659)
|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998765 799999999999999999999999999999999999999999
Q ss_pred HHcCcHHHH----HHHHhCCCCC
Q psy9757 638 NQMQLNDII----ELLKSSETKS 656 (659)
Q Consensus 638 ~~~g~~eiv----~~Ll~~ga~~ 656 (659)
+..++.+++ ++|+++|++.
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHcCChHHHHHHHHHHHhcCCch
Confidence 999999988 9999999975
No 73
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=6.6e-28 Score=234.96 Aligned_cols=181 Identities=17% Similarity=0.179 Sum_probs=161.6
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhhccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHH
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLKKILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIV 514 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv 514 (659)
..++.+.++.++ .....+++..+ ..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++
T Consensus 14 ~~g~~~~v~~ll----~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 88 (201)
T 3hra_A 14 NQRDTKKVKEIL----QDTTYQVDEVD-TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL 88 (201)
T ss_dssp HTTCHHHHHHHH----TCTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HhccHHHHHHHH----HcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 344444444442 22333444433 3466899999999999999999999999999999999999999999999999
Q ss_pred HHHH-HCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHHcC
Q psy9757 515 KYCL-ENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCG-AHLTNEPMFLGDVLTNAAARGM-----IKRLQSYLLAG 587 (659)
Q Consensus 515 ~~LL-~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~g-a~~~~~~~~g~t~L~~Aa~~g~-----~~~v~~Ll~~g 587 (659)
++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++ .+++++|+++|
T Consensus 89 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g 168 (201)
T 3hra_A 89 AYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG 168 (201)
T ss_dssp HHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT
T ss_pred HHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC
Confidence 9999 667899999999999999999999999999999999 9999999999999999999998 99999999999
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 588 INLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 588 ad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
++++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 169 a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 169 ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999999999999999999999999999986
No 74
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=4.1e-29 Score=250.46 Aligned_cols=179 Identities=18% Similarity=0.182 Sum_probs=166.7
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC------CCccCCCCCCHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVS------VHIRDNYDISPL 535 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gad------in~~d~~g~TpL 535 (659)
+..+.|+||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++++++ ++..+..|.|||
T Consensus 42 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 121 (236)
T 1ikn_D 42 NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHH
Confidence 34567899999999999999999999999999999999999999999999999999999876 467888999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHH
Q psy9757 536 HEAVIADQHDIIRLLRHCGAHLTNEPM-FLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVR 614 (659)
Q Consensus 536 ~~Aa~~g~~eivklLl~~ga~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk 614 (659)
|+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++++
T Consensus 122 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~ 201 (236)
T 1ikn_D 122 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQ 201 (236)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHH
Confidence 999999999999999999999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCCC--CcccCCCcHHHHHHHc
Q psy9757 615 YLLSQHVDLT--IENKNGQSAIEVANQM 640 (659)
Q Consensus 615 ~LL~~Gad~~--~~d~~G~TpL~~A~~~ 640 (659)
+|+++|++.. ..+..|.||.+.+...
T Consensus 202 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 202 QLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHcchhhhhcCCccchHHHHhhhccc
Confidence 9999999876 7888999988766543
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.3e-28 Score=232.88 Aligned_cols=159 Identities=23% Similarity=0.275 Sum_probs=125.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q psy9757 495 DFDRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAA 573 (659)
Q Consensus 495 d~~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~ 573 (659)
+.+|.||||.|++.|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45567777777777777777777763 55666677777777777777777777777777777777777777788888888
Q ss_pred cCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 574 RGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 574 ~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
.|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|.. ++.+++++|+++|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 888888888888888888888888888888888888888888888888888888888888888766 7888888888877
Q ss_pred C
Q psy9757 654 T 654 (659)
Q Consensus 654 a 654 (659)
+
T Consensus 164 A 164 (165)
T 3twr_A 164 A 164 (165)
T ss_dssp -
T ss_pred c
Confidence 5
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.7e-28 Score=234.21 Aligned_cols=165 Identities=18% Similarity=0.148 Sum_probs=124.4
Q ss_pred cHHHHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
.++|+.|+..|+.+++++|+++ +.+++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 85 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHR 85 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 3456777777777777777776 456777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++
T Consensus 86 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 86 DIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777776
Q ss_pred CcccCC
Q psy9757 625 IENKNG 630 (659)
Q Consensus 625 ~~d~~G 630 (659)
..+..+
T Consensus 166 ~~~~~~ 171 (179)
T 3f6q_A 166 RIPYKD 171 (179)
T ss_dssp CBCCCC
T ss_pred cCCccc
Confidence 655443
No 77
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=5.9e-29 Score=255.15 Aligned_cols=200 Identities=18% Similarity=0.237 Sum_probs=159.5
Q ss_pred ccchhhHHHHHHHHHhhcChhhh---hhhhccCCcHHHHHHHHc---CCHHHHHHHHhcCCCc-------cc----CCCC
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQEL---NKLKKILYPALFQSAVRE---GDIDKIKEMQNYGADI-------SM----TDFD 497 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~---~~~~~~~~~t~L~~Aa~~---g~~~iv~~Ll~~ga~v-------n~----~d~~ 497 (659)
..++.+.++.+++.... ...++ +...+..+.|+||+|+.. |+.+++++|+++|+++ +. .|..
T Consensus 22 ~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~ 100 (273)
T 2pnn_A 22 AQSNCQELESLLPFLQR-SKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYK 100 (273)
T ss_dssp HTTCSSTTTTHHHHHHH-SCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTT
T ss_pred HcCCHHHHHHHHHHHhh-cccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCC
Confidence 34445555555544321 12222 223355678899999987 9999999999998652 32 5678
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCC--------------CCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDN--------------YDISPLHEAVIADQHDIIRLLRH---CGAHLTNE 560 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~--------------~g~TpL~~Aa~~g~~eivklLl~---~ga~~~~~ 560 (659)
|+||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++ +|++++.+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~ 180 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR 180 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceee
Confidence 99999999999999999999999999999987 79999999999999999999999 99999999
Q ss_pred CCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCcc-------cCCCCCChHHHHHHHcCCHHHHHHHHHCCC-CC
Q psy9757 561 PMFLGDVLTNAAARGM---------IKRLQSYLLAGINLN-------QVDSIGLTPLHAAVLNNNIESVRYLLSQHV-DL 623 (659)
Q Consensus 561 ~~~g~t~L~~Aa~~g~---------~~~v~~Ll~~gad~n-------~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Ga-d~ 623 (659)
+..|+||||+|+..|+ .+++++|+++|+++| .+|..|+||||+|+.+|+.+++++|+++|+ |+
T Consensus 181 d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred CCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 9999999999999998 899999999999987 489999999999999999999999999999 88
Q ss_pred CCcccCCCcHHH
Q psy9757 624 TIENKNGQSAIE 635 (659)
Q Consensus 624 ~~~d~~G~TpL~ 635 (659)
......+.+|-+
T Consensus 261 ~~~~~~~~~~~~ 272 (273)
T 2pnn_A 261 ECRHAAAHHHHH 272 (273)
T ss_dssp ------------
T ss_pred hhhhhhhhhccC
Confidence 887777766643
No 78
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.6e-28 Score=233.30 Aligned_cols=162 Identities=22% Similarity=0.213 Sum_probs=154.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q psy9757 496 FDRRNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR 574 (659)
Q Consensus 496 ~~g~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~ 574 (659)
.++.++||.|+..|+.+++++|++. +.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3578999999999999999999998 678999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy9757 575 GMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSET 654 (659)
Q Consensus 575 g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga 654 (659)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q psy9757 655 KSK 657 (659)
Q Consensus 655 ~~~ 657 (659)
+.+
T Consensus 163 ~~~ 165 (179)
T 3f6q_A 163 NLN 165 (179)
T ss_dssp CCS
T ss_pred Ccc
Confidence 875
No 79
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-27 Score=222.85 Aligned_cols=150 Identities=23% Similarity=0.302 Sum_probs=145.7
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHD 545 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~e 545 (659)
.++|+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 468999999999999999999999887 5788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 546 IIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 546 ivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 80
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=9.4e-29 Score=250.98 Aligned_cols=188 Identities=22% Similarity=0.206 Sum_probs=164.0
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhh---hhccCCcHHHHHHHHc---CCHHHHHHHHhcCCCcccC-----------CCC
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNK---LKKILYPALFQSAVRE---GDIDKIKEMQNYGADISMT-----------DFD 497 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~---~~~~~~~t~L~~Aa~~---g~~~iv~~Ll~~ga~vn~~-----------d~~ 497 (659)
..++.+.++.+++.+. ..+.+++. ..+..+.|+||+|+.. |+.+++++|+++|++++.. |..
T Consensus 11 ~~g~~~~v~~ll~~l~-~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~ 89 (256)
T 2etb_A 11 SRGVPEELTGLLEYLR-WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQ 89 (256)
T ss_dssp HHTCGGGGTTHHHHHH-HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTT
T ss_pred HcCCHHHHHHHHHHHH-HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccccccccc
Confidence 4455555555555443 23334443 2455678899999999 9999999999998876633 367
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCC-------------CCCHHHHHHHcCCHHHHHHHHH---cCCCCCCCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNY-------------DISPLHEAVIADQHDIIRLLRH---CGAHLTNEP 561 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~-------------g~TpL~~Aa~~g~~eivklLl~---~ga~~~~~~ 561 (659)
|+||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++ +|++++.++
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d 169 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD 169 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccC
Confidence 999999999999999999999999999999886 9999999999999999999999 999999999
Q ss_pred CCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCc-------ccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Q psy9757 562 MFLGDVLTNAAA--RGMIK-------RLQSYLLAGINL-------NQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDL 623 (659)
Q Consensus 562 ~~g~t~L~~Aa~--~g~~~-------~v~~Ll~~gad~-------n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~ 623 (659)
..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|.+.
T Consensus 170 ~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 170 SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999 78888 999999999999 899999999999999999999999999998765
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.4e-27 Score=223.45 Aligned_cols=152 Identities=22% Similarity=0.301 Sum_probs=108.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q psy9757 499 RNILHTACSVGKLDIVKYCLEN-GVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMI 577 (659)
Q Consensus 499 ~TpLh~Aa~~g~~~iv~~LL~~-gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~ 577 (659)
.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 4666777777777777766666 33666666666777777 666677777777777776666666677777777777777
Q ss_pred HHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhC
Q psy9757 578 KRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSS 652 (659)
Q Consensus 578 ~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ 652 (659)
+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 777777777777777777777777777777777777777777 77777777777777777777777777777654
No 82
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.2e-27 Score=226.22 Aligned_cols=157 Identities=22% Similarity=0.301 Sum_probs=148.4
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHh-cCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 464 LYPALFQSAVREGDIDKIKEMQN-YGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~Ll~-~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
.+.++|+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcC
Confidence 34578999999999999999998 45778888889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q psy9757 543 QHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHV 621 (659)
Q Consensus 543 ~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Ga 621 (659)
+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|+
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999776 99999999999886
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=9.2e-31 Score=262.83 Aligned_cols=184 Identities=14% Similarity=0.090 Sum_probs=170.5
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIA 541 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~ 541 (659)
+....++||.|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC 97 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC-CCCCcHHHHH--HHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHH
Q psy9757 542 DQHDIIRLLRHCGAHLTNEP-MFLGDVLTNA--AARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLS 618 (659)
Q Consensus 542 g~~eivklLl~~ga~~~~~~-~~g~t~L~~A--a~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~ 618 (659)
|+.+++++|+++|++++..+ ..|.||||+| +..|+.+++++|++.|++++..|..|.|||+.++..+. .++|++
T Consensus 98 g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~ 174 (229)
T 2vge_A 98 NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELSFR 174 (229)
T ss_dssp TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCCBC
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cccCcc
Confidence 99999999999999999986 6999999999 99999999999999999999999999999996655543 367889
Q ss_pred CCCC--CCCcccCCCcHHHHHHHcCcHHHHHH
Q psy9757 619 QHVD--LTIENKNGQSAIEVANQMQLNDIIEL 648 (659)
Q Consensus 619 ~Gad--~~~~d~~G~TpL~~A~~~g~~eiv~~ 648 (659)
.|++ ++.+|..|+||||+|+.+|+.++|+.
T Consensus 175 ~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 175 EGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp TTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred ccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 9998 67889999999999999999998864
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=7.9e-27 Score=218.24 Aligned_cols=152 Identities=20% Similarity=0.228 Sum_probs=147.0
Q ss_pred cHHHHHHHHcCCHHHHHHHHhc-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNY-GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQH 544 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~-ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~ 544 (659)
.++||.|+..|+.+++++|+++ +.+++..+..|+||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 4789999999999999999998 45899999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 545 DIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 545 eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
+++++|+++|++++.++..|.||||+|+..|+.+++++|++. ++++.+|..|+||||+|+.+|+.+++++|+++
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999 99999999999999999999999999999975
No 85
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=8.5e-28 Score=244.33 Aligned_cols=189 Identities=19% Similarity=0.188 Sum_probs=161.5
Q ss_pred ccchhhHHHHHHHHHhhcChhhhhhhh---ccCCcHHHHHHH---HcCCHHHHHHHHhcCCC-----------cccCCCC
Q psy9757 435 HNNELDLAAAVAKTLHLSGRQELNKLK---KILYPALFQSAV---REGDIDKIKEMQNYGAD-----------ISMTDFD 497 (659)
Q Consensus 435 ~~~~~~~i~~l~~~l~~~~~~~~~~~~---~~~~~t~L~~Aa---~~g~~~iv~~Ll~~ga~-----------vn~~d~~ 497 (659)
..++.+.++.+++.+.. .+.+++... +..+.|+||+|+ ..|+.+++++|+++|++ ++..|..
T Consensus 14 ~~g~~~~v~~ll~~l~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~ 92 (260)
T 3jxi_A 14 SRGSPDGLEGLLSFLLT-HKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYR 92 (260)
T ss_dssp HHTCGGGGTTHHHHHHH-HTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEE
T ss_pred HhCCHHHHHHHHHHHHh-cCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccC
Confidence 45556655556554432 222333222 255778999999 67999999999998743 4455668
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccC--------------CCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCC
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRD--------------NYDISPLHEAVIADQHDIIRLLRH---CGAHLTNE 560 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d--------------~~g~TpL~~Aa~~g~~eivklLl~---~ga~~~~~ 560 (659)
|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|++ +|++++.+
T Consensus 93 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~ 172 (260)
T 3jxi_A 93 GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQ 172 (260)
T ss_dssp SBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCccc
Confidence 9999999999999999999999999999998 689999999999999999999999 99999999
Q ss_pred CCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCc-------ccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy9757 561 PMFLGDVLTNAAARGM---------IKRLQSYLLAGINL-------NQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLT 624 (659)
Q Consensus 561 ~~~g~t~L~~Aa~~g~---------~~~v~~Ll~~gad~-------n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~ 624 (659)
+..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+.+|+.+++++|+++|++..
T Consensus 173 d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 173 DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 9999999999999887 79999999999998 6799999999999999999999999999987653
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.4e-28 Score=245.23 Aligned_cols=178 Identities=14% Similarity=0.111 Sum_probs=136.7
Q ss_pred CCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Q psy9757 464 LYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQ 543 (659)
Q Consensus 464 ~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~ 543 (659)
.+.|+||.|+..|+.+.++.|+++|++++.. ..|.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 3568999999999999999999999999865 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCC-hHHHHH--HHcCCHHHHHHHHHCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGL-TPLHAA--VLNNNIESVRYLLSQH 620 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~-TpLh~A--a~~g~~~ivk~LL~~G 620 (659)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++|
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~ 162 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 162 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999998877 999999 8889999999999999
Q ss_pred CCCCCc---------ccCCCcHHHHHHHcCc
Q psy9757 621 VDLTIE---------NKNGQSAIEVANQMQL 642 (659)
Q Consensus 621 ad~~~~---------d~~G~TpL~~A~~~g~ 642 (659)
++++.. +..+.++++++.+.|.
T Consensus 163 a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 163 EKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hcccccccceEEEEeccCCCCCCcccccCCC
Confidence 998876 5568888888877765
No 87
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=237.94 Aligned_cols=160 Identities=14% Similarity=0.118 Sum_probs=153.3
Q ss_pred hccCCcHHHHHHHHcCCHHHHHHHHhcCC-CcccCCCCCCcHHHHHH-----HcCCHHHHHHHHHCCCCCCccCCCCCCH
Q psy9757 461 KKILYPALFQSAVREGDIDKIKEMQNYGA-DISMTDFDRRNILHTAC-----SVGKLDIVKYCLENGVSVHIRDNYDISP 534 (659)
Q Consensus 461 ~~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga-~vn~~d~~g~TpLh~Aa-----~~g~~~iv~~LL~~gadin~~d~~g~Tp 534 (659)
.+..+.|+||+|+..|+.+++++|+++|+ +++..+..|+||||+|+ ..++.+++++|++.|.+++..+..|.||
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp 186 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTA 186 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCH
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCH
Confidence 34567789999999999999999999998 99999999999999999 6688999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCcccCCCCCChHHHHHHHcCCHHHH
Q psy9757 535 LHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNNNIESV 613 (659)
Q Consensus 535 L~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g~~~iv 613 (659)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+.+|+.+++
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHCC
Q psy9757 614 RYLLSQH 620 (659)
Q Consensus 614 k~LL~~G 620 (659)
++|++++
T Consensus 267 ~~Ll~~~ 273 (276)
T 4hbd_A 267 SMLYSRM 273 (276)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9999864
No 88
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.6e-27 Score=238.74 Aligned_cols=162 Identities=16% Similarity=0.170 Sum_probs=123.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q psy9757 496 FDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARG 575 (659)
Q Consensus 496 ~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g 575 (659)
..|.||||.|++.++.++++.|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 46899999999999999999999999999864 77899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCC-cHHHHH--HHcCcHHHHHHHHhC
Q psy9757 576 MIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQ-SAIEVA--NQMQLNDIIELLKSS 652 (659)
Q Consensus 576 ~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~-TpL~~A--~~~g~~eiv~~Ll~~ 652 (659)
+.+++++|+++|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|+++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998887 999999 888999999999998
Q ss_pred CCCCCC
Q psy9757 653 ETKSKV 658 (659)
Q Consensus 653 ga~~~v 658 (659)
|++.+.
T Consensus 162 ~a~~~~ 167 (239)
T 1ycs_B 162 QEKMGI 167 (239)
T ss_dssp HHHTTT
T ss_pred hhcccc
Confidence 887643
No 89
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5e-26 Score=208.50 Aligned_cols=133 Identities=23% Similarity=0.295 Sum_probs=82.5
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcH
Q psy9757 489 ADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMF-LGDV 567 (659)
Q Consensus 489 a~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~-g~t~ 567 (659)
++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.++.. |.||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 4566666666666666666666666666666666666666666666666666 6666666666666666655555 5555
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 568 LTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 568 L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|+|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5555555555555555555555555555555555555555555555555555543
No 90
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=3.4e-26 Score=214.71 Aligned_cols=145 Identities=21% Similarity=0.211 Sum_probs=118.0
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCc-HHHH
Q psy9757 492 SMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGD-VLTN 570 (659)
Q Consensus 492 n~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t-~L~~ 570 (659)
+..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++.++..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 455678899999999999999999999999999999999999999985 89999999999999999999999998 9999
Q ss_pred HHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHH
Q psy9757 571 AAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVA 637 (659)
Q Consensus 571 Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A 637 (659)
|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999988743
No 91
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=9.1e-26 Score=206.75 Aligned_cols=134 Identities=19% Similarity=0.212 Sum_probs=131.1
Q ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCC-CCh
Q psy9757 521 GVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSI-GLT 599 (659)
Q Consensus 521 gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~-g~T 599 (659)
+++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. |+.+++++|+++|++++.+|.. |+|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 600 PLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 600 pLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999986
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=7.7e-26 Score=219.64 Aligned_cols=150 Identities=16% Similarity=0.151 Sum_probs=101.7
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcccCC-CCCCcHHHHHHHcCCH----HHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADISMTD-FDRRNILHTACSVGKL----DIVKYCLENGVSVHIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d-~~g~TpLh~Aa~~g~~----~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g 542 (659)
.|+.|++.|+.+.++.+++.+.+ ..+ ..|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..+
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGG 86 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 46778888888888888877643 333 5688888888888864 4888888888888888888888888888877
Q ss_pred C------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCcccCCCCCChHHHHHHHcCC
Q psy9757 543 Q------HDIIRLLRHCGAHLTNEPMFLG-DVLTNAAARG-----MIKRLQSYLL-AGINLNQVDSIGLTPLHAAVLNNN 609 (659)
Q Consensus 543 ~------~eivklLl~~ga~~~~~~~~g~-t~L~~Aa~~g-----~~~~v~~Ll~-~gad~n~~d~~g~TpLh~Aa~~g~ 609 (659)
+ .+++++|+++|+++|.+|..|. ||||+|+..+ +.+++++|++ .|++++.+|..|+||||+|++.|+
T Consensus 87 ~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 87 GNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTC
T ss_pred CcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCC
Confidence 6 4556666666666666666666 6666666532 2345555555 555555555555555555555555
Q ss_pred HHHHHHHHHC
Q psy9757 610 IESVRYLLSQ 619 (659)
Q Consensus 610 ~~ivk~LL~~ 619 (659)
.+++++|+++
T Consensus 167 ~~~v~~L~~~ 176 (186)
T 3t8k_A 167 PIALKMMEDY 176 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=6e-26 Score=220.40 Aligned_cols=155 Identities=14% Similarity=0.127 Sum_probs=141.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRD-NYDISPLHEAVIADQH----DIIRLLRHCGAHLTNEPMFLGDVLTNAA 572 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~g~~----eivklLl~~ga~~~~~~~~g~t~L~~Aa 572 (659)
++++|+.|++.|+.+.++.+++.+. +.++ ..|+||||+|+.+|+. +++++|+++|+++|.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 5689999999999999999998764 4555 7799999999999975 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHcCCCcccCCCCCC-hHHHHHHHcC-----CHHHHHHHHH-CCCCCCCcccCCCcHHHHHHH
Q psy9757 573 ARGM------IKRLQSYLLAGINLNQVDSIGL-TPLHAAVLNN-----NIESVRYLLS-QHVDLTIENKNGQSAIEVANQ 639 (659)
Q Consensus 573 ~~g~------~~~v~~Ll~~gad~n~~d~~g~-TpLh~Aa~~g-----~~~ivk~LL~-~Gad~~~~d~~G~TpL~~A~~ 639 (659)
..++ .+++++|+++|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 9986 6889999999999999999999 9999999954 4579999999 999999999999999999999
Q ss_pred cCcHHHHHHHHhCCC
Q psy9757 640 MQLNDIIELLKSSET 654 (659)
Q Consensus 640 ~g~~eiv~~Ll~~ga 654 (659)
.++.+++++|.+...
T Consensus 164 ~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 164 CQKPIALKMMEDYIK 178 (186)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 999999999987543
No 94
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.7e-26 Score=231.62 Aligned_cols=172 Identities=15% Similarity=0.118 Sum_probs=148.8
Q ss_pred HHHHHhcCCCcccCC---CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q psy9757 481 IKEMQNYGADISMTD---FDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHL 557 (659)
Q Consensus 481 v~~Ll~~ga~vn~~d---~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~ 557 (659)
++.|+++|++++..+ ..+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467899998876554 45678899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCC-CCCChHHHHH--HHcCCHHHHHHHHHCCCCCCCcccCCCcHH
Q psy9757 558 TNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVD-SIGLTPLHAA--VLNNNIESVRYLLSQHVDLTIENKNGQSAI 634 (659)
Q Consensus 558 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d-~~g~TpLh~A--a~~g~~~ivk~LL~~Gad~~~~d~~G~TpL 634 (659)
+..+..|+||||+|+..|+.+++++|++.|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 9999999999999999999999999999999999986 6999999999 999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhCCCC
Q psy9757 635 EVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 635 ~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
+.++.... .++|++.|++
T Consensus 161 ~~~~~~~~---~~~ll~~ga~ 178 (229)
T 2vge_A 161 WDYSAEFG---DELSFREGES 178 (229)
T ss_dssp SCBCCSST---TBCCBCTTCE
T ss_pred HHHhhccc---cccCcccccc
Confidence 86544432 3566777765
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=7.1e-25 Score=205.66 Aligned_cols=142 Identities=14% Similarity=0.169 Sum_probs=120.2
Q ss_pred ccCCcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC-HHHHHHH
Q psy9757 462 KILYPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDIS-PLHEAVI 540 (659)
Q Consensus 462 ~~~~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~T-pL~~Aa~ 540 (659)
...+.++||+|+..|+.+++++|+++|++++..+..|+||||+|+ .|+.+++++|+++|++++.+|..|.| |||+|+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 344568999999999999999999999999999999999999996 99999999999999999999999999 9999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHH
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAA 604 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~A 604 (659)
.|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||.+.+
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999998744
No 96
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=8.2e-24 Score=189.31 Aligned_cols=124 Identities=33% Similarity=0.452 Sum_probs=72.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMI 577 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~ 577 (659)
|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 56666666666666666666666666666666666666666666666666666666655555555555555555555555
Q ss_pred HHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q psy9757 578 KRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHV 621 (659)
Q Consensus 578 ~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Ga 621 (659)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 55555555555555555555555555555555555555555554
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=9.8e-24 Score=193.16 Aligned_cols=124 Identities=25% Similarity=0.304 Sum_probs=69.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM 576 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~ 576 (659)
.+.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34556666666666666666666666666555556666666666666555555555555555555555555555555555
Q ss_pred HHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC
Q psy9757 577 IKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH 620 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G 620 (659)
.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 55555555555555555555555555555555555555555443
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=2.1e-23 Score=186.59 Aligned_cols=126 Identities=28% Similarity=0.399 Sum_probs=123.6
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCC
Q psy9757 530 YDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNN 609 (659)
Q Consensus 530 ~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~ 609 (659)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 610 IESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 610 ~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999986
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=3.6e-25 Score=213.50 Aligned_cols=140 Identities=19% Similarity=0.137 Sum_probs=122.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHH
Q psy9757 495 DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEP-MFLGDVLTNAAA 573 (659)
Q Consensus 495 d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~-~~g~t~L~~Aa~ 573 (659)
+..|+||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3467899999999999999999998 88999999999999999999999999999999999998887 788999999999
Q ss_pred cCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhC
Q psy9757 574 RGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSS 652 (659)
Q Consensus 574 ~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ 652 (659)
.|+.+++++|+++|++++.+|..|+||||+|++.++. ..+.++|++|++.|+.+++++|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999999999999999875322 3567899999999999999998865
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.8e-23 Score=191.46 Aligned_cols=126 Identities=29% Similarity=0.375 Sum_probs=121.4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHc
Q psy9757 528 DNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLN 607 (659)
Q Consensus 528 d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~ 607 (659)
...+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 608 NNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 608 g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999886
No 101
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=3.5e-24 Score=196.15 Aligned_cols=133 Identities=19% Similarity=0.209 Sum_probs=82.0
Q ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHH
Q psy9757 522 VSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPL 601 (659)
Q Consensus 522 adin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpL 601 (659)
+|+ .+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 80 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHH
Confidence 444 4455555555555555555555555555555555555555555555555556666666666666666666777777
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 602 HAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 602 h~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|.+.+..
T Consensus 81 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 777777777777777777777777777777777777777777777776665544
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=5.3e-26 Score=244.65 Aligned_cols=181 Identities=10% Similarity=0.006 Sum_probs=145.8
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCc---ccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCCHHHHHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADI---SMTDFDRRNILHTACSVGKLDIVKYCLENGVSV---HIRDNYDISPLHEAV 539 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~v---n~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadi---n~~d~~g~TpL~~Aa 539 (659)
.|+||+|+..|+.+++++|+++|+.. +..+..|.||||+|+..|+.++|++|+++|+++ +..+.. .||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 48899999999999999999998722 233446788999999999999999999999762 332333 89999999
Q ss_pred HcCCHHHHHHHHHcCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHH
Q psy9757 540 IADQHDIIRLLRHCGAHLTN--EPMFLGDVLTNAA-ARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYL 616 (659)
Q Consensus 540 ~~g~~eivklLl~~ga~~~~--~~~~g~t~L~~Aa-~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~L 616 (659)
..|+.+++++|+++|++++. .+..|.||||+|+ .+|+.+++++|++.|+ .|.||||+|+.+|+.+++++|
T Consensus 172 ~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp HTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHH
T ss_pred HCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHH
Confidence 99999999999999998876 7778899999999 9999999999998764 278999999999999999999
Q ss_pred HHCCCCCC-------------------------------------------------------------CcccCCCcHHH
Q psy9757 617 LSQHVDLT-------------------------------------------------------------IENKNGQSAIE 635 (659)
Q Consensus 617 L~~Gad~~-------------------------------------------------------------~~d~~G~TpL~ 635 (659)
+++|++++ .....+.||||
T Consensus 245 ~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~ 324 (376)
T 2aja_A 245 ARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLR 324 (376)
T ss_dssp HHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHH
T ss_pred HhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHH
Confidence 87654321 11234578999
Q ss_pred HHHHcCcHHHHHHHHhCCC
Q psy9757 636 VANQMQLNDIIELLKSSET 654 (659)
Q Consensus 636 ~A~~~g~~eiv~~Ll~~ga 654 (659)
+|+..|+.+++++|++.+.
T Consensus 325 ~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 325 LALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HHHHHTCTTHHHHHTTSHH
T ss_pred HHHHcCcHHHHHHHHcChH
Confidence 9999999999999998653
No 103
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=7.7e-24 Score=193.85 Aligned_cols=133 Identities=24% Similarity=0.318 Sum_probs=119.6
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q psy9757 488 GADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDV 567 (659)
Q Consensus 488 ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~ 567 (659)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5667 678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q psy9757 568 LTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHV 621 (659)
Q Consensus 568 L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Ga 621 (659)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+++++|.+.+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999888876544
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=3.8e-25 Score=238.01 Aligned_cols=174 Identities=10% Similarity=-0.033 Sum_probs=148.5
Q ss_pred HHHHHHHH-cCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC---CccCCCCCCHHHHHHHcC
Q psy9757 467 ALFQSAVR-EGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSV---HIRDNYDISPLHEAVIAD 542 (659)
Q Consensus 467 t~L~~Aa~-~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadi---n~~d~~g~TpL~~Aa~~g 542 (659)
+.+++|.. .++.+++++|+++|.+. +||||+|++.|+.++|++|+++|+.. +..+..|.||||+|+..|
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 45566665 57899999999998764 49999999999999999999998832 234456789999999999
Q ss_pred CHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc--CCCCCChHHHHHH-HcCCHHHHHHH
Q psy9757 543 QHDIIRLLRHCGAHL---TNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQ--VDSIGLTPLHAAV-LNNNIESVRYL 616 (659)
Q Consensus 543 ~~eivklLl~~ga~~---~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~--~d~~g~TpLh~Aa-~~g~~~ivk~L 616 (659)
+.+++++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .|..|+||||+|+ .+|+.+++++|
T Consensus 140 ~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~L 218 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218 (376)
T ss_dssp CHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred CHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHH
Confidence 999999999999762 222223 8999999999999999999999999887 8889999999999 99999999999
Q ss_pred HHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 617 LSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 617 L~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
+++|++ |.|||++|+.+|+.+++++|+++|++
T Consensus 219 l~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 219 LDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp TTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred HhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcc
Confidence 998743 88999999999999999999998764
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=8.1e-23 Score=206.68 Aligned_cols=140 Identities=19% Similarity=0.172 Sum_probs=109.7
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD-NYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~g~ 543 (659)
+.|+||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 4577888888888888888888 88888888888888888888888888888888888888777 678888888888888
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVD 622 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad 622 (659)
.+++++|+++|++++.++..|.||||+|+..++ ...+.||||+|+..|+.+++++|++++.+
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 888888888888888888888888888875221 24567778887777777777777776444
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=2.7e-22 Score=193.27 Aligned_cols=137 Identities=19% Similarity=0.172 Sum_probs=128.7
Q ss_pred CcHHHHHHHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHcCC
Q psy9757 465 YPALFQSAVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRD-NYDISPLHEAVIADQ 543 (659)
Q Consensus 465 ~~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d-~~g~TpL~~Aa~~g~ 543 (659)
+.|+||+|+..|+.+++++|++ |++++..|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 4589999999999999999999 99999999999999999999999999999999999999998 889999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy9757 544 HDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQ 619 (659)
Q Consensus 544 ~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~ 619 (659)
.+++++|+++|++++.++..|.||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999999999999999999999999999975432 3568999999999999999999875
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.5e-22 Score=204.76 Aligned_cols=161 Identities=18% Similarity=0.142 Sum_probs=140.2
Q ss_pred HHHcCCHHHHHHHHhcCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Q psy9757 472 AVREGDIDKIKEMQNYGADISMTDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLR 551 (659)
Q Consensus 472 Aa~~g~~~iv~~Ll~~ga~vn~~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl 551 (659)
++..|+.+.++.+...+.+++ ..|.||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 22 ~~~~g~~~~~~~~~~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 97 (244)
T 3ui2_A 22 EWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA 97 (244)
T ss_dssp EESSCCCCEEEEGGGSCHHHH---HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCCCcccccccccccccc---cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 344444444444444343333 468999999999999999999999 9999999999999999999999999999999
Q ss_pred HcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCC
Q psy9757 552 HCGAHLTNEP-MFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNG 630 (659)
Q Consensus 552 ~~ga~~~~~~-~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G 630 (659)
++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++. ..+
T Consensus 98 ~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-----------------~~~ 160 (244)
T 3ui2_A 98 EAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPK 160 (244)
T ss_dssp HTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT-----------------CCC
T ss_pred HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc-----------------cCC
Confidence 9999999988 7899999999999999999999999999999999999999999874332 357
Q ss_pred CcHHHHHHHcCcHHHHHHHHhCC
Q psy9757 631 QSAIEVANQMQLNDIIELLKSSE 653 (659)
Q Consensus 631 ~TpL~~A~~~g~~eiv~~Ll~~g 653 (659)
.|||++|+..|+.+++++|++++
T Consensus 161 ~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 161 GNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHhc
Confidence 89999999999999999999853
No 108
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=5.6e-23 Score=204.05 Aligned_cols=134 Identities=21% Similarity=0.183 Sum_probs=73.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHc
Q psy9757 496 FDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHC-GAHLTNEPMFLGDVLTNAAAR 574 (659)
Q Consensus 496 ~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~-ga~~~~~~~~g~t~L~~Aa~~ 574 (659)
..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ |++++.++..|+||||+|+..
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 3455666666666666666666666666666666666666666666666666666655 566666666666666666666
Q ss_pred CCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccC
Q psy9757 575 GMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKN 629 (659)
Q Consensus 575 g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~ 629 (659)
|+.+++++|+++|++++.+|..|+||||+|+..++.++++.|+++|+..+.++..
T Consensus 151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 6666666666666666666666666666666666666666666666665555443
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=4.2e-22 Score=208.09 Aligned_cols=122 Identities=20% Similarity=0.179 Sum_probs=61.6
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCCccc------CCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCccCCCCCCHHHH
Q psy9757 467 ALFQSAVREGDIDKIKEMQNYGADISM------TDFDRRNILHTACSV---GKLDIVKYCLENGVSVHIRDNYDISPLHE 537 (659)
Q Consensus 467 t~L~~Aa~~g~~~iv~~Ll~~ga~vn~------~d~~g~TpLh~Aa~~---g~~~iv~~LL~~gadin~~d~~g~TpL~~ 537 (659)
++|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. |+.+++++|+++|+++|.+|..|.||||+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 345555555555555555555555544 344555555555554 45555555555555555555555555555
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy9757 538 AVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGI 588 (659)
Q Consensus 538 Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ga 588 (659)
|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 555555555555555555444444444444444444444444444444443
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=3.2e-22 Score=208.98 Aligned_cols=141 Identities=19% Similarity=0.110 Sum_probs=126.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCc------cCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcH
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVHI------RDNYDISPLHEAVIA---DQHDIIRLLRHCGAHLTNEPMFLGDV 567 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin~------~d~~g~TpL~~Aa~~---g~~eivklLl~~ga~~~~~~~~g~t~ 567 (659)
...++|+.|+..|+.+.+++|++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++.++..|+||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 345789999999999999999999999998 689999999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcH
Q psy9757 568 LTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLN 643 (659)
Q Consensus 568 L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ 643 (659)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+++|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999999886 589999999999874
No 111
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=6.3e-22 Score=177.66 Aligned_cols=108 Identities=24% Similarity=0.196 Sum_probs=50.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q psy9757 497 DRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGM 576 (659)
Q Consensus 497 ~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~ 576 (659)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34455555555555555555555555555555555555555555555555555555444444444333333333333333
Q ss_pred HHHHHHHHHcCCCcccCCCCCChHHHHH
Q psy9757 577 IKRLQSYLLAGINLNQVDSIGLTPLHAA 604 (659)
Q Consensus 577 ~~~v~~Ll~~gad~n~~d~~g~TpLh~A 604 (659)
.+++++|+++|++++.+|..|+||||+|
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 3333333333333333333333333333
No 112
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=6.8e-22 Score=177.46 Aligned_cols=118 Identities=23% Similarity=0.273 Sum_probs=109.3
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHc
Q psy9757 528 DNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLN 607 (659)
Q Consensus 528 d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~ 607 (659)
+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHH
Q psy9757 608 NNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDI 645 (659)
Q Consensus 608 g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ei 645 (659)
|+.+++++|+++|++++.+|..|.||||+|...+..++
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 99999999999999999999999999999954444443
No 113
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.86 E-value=2.8e-22 Score=198.99 Aligned_cols=132 Identities=19% Similarity=0.200 Sum_probs=118.3
Q ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccCCCCCChHHHHHH
Q psy9757 527 RDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLA-GINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 527 ~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-gad~n~~d~~g~TpLh~Aa 605 (659)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 466789999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCCCCC
Q psy9757 606 LNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETKSKV 658 (659)
Q Consensus 606 ~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~~~v 658 (659)
..|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|++.++...+
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 99999999999999999999999999999999999999999999999987654
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.5e-20 Score=201.57 Aligned_cols=160 Identities=20% Similarity=0.217 Sum_probs=106.2
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHCCCCCCccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q psy9757 495 DFDRRNILHTACSV-GKLDIVKYCLENGVSVHIRD--NYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNA 571 (659)
Q Consensus 495 d~~g~TpLh~Aa~~-g~~~iv~~LL~~gadin~~d--~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~A 571 (659)
...+.|+||.|+.. |+.+++++|+++|+++|..+ ..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34456788888888 88888888888888888887 7788888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCC---CCCCCcccCCCcHHHHHHHcCc--HHHH
Q psy9757 572 AARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQH---VDLTIENKNGQSAIEVANQMQL--NDII 646 (659)
Q Consensus 572 a~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~G---ad~~~~d~~G~TpL~~A~~~g~--~eiv 646 (659)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++ .+....+..+.|+++++..... .+-.
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ 355 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDP 355 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------------
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCH
Confidence 8888888888888888888888888888888888888888888888765 3344556667888887766543 2333
Q ss_pred HHHHhCCC
Q psy9757 647 ELLKSSET 654 (659)
Q Consensus 647 ~~Ll~~ga 654 (659)
+.|..++.
T Consensus 356 ekl~r~~~ 363 (368)
T 3jue_A 356 EKLSRRSH 363 (368)
T ss_dssp --------
T ss_pred HHHHhcCC
Confidence 44444443
No 115
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.3e-20 Score=208.39 Aligned_cols=134 Identities=20% Similarity=0.193 Sum_probs=108.8
Q ss_pred cHHHHHHHHcCCHHHHHHHHhcCCCcccC------CCCCCcHHHHHHH---cCCHHHHHHHHHCCCCCCccCCCCCCHHH
Q psy9757 466 PALFQSAVREGDIDKIKEMQNYGADISMT------DFDRRNILHTACS---VGKLDIVKYCLENGVSVHIRDNYDISPLH 536 (659)
Q Consensus 466 ~t~L~~Aa~~g~~~iv~~Ll~~ga~vn~~------d~~g~TpLh~Aa~---~g~~~iv~~LL~~gadin~~d~~g~TpL~ 536 (659)
...||.|+..|+.+.++.|+++|+++|.. +..|+||||+||. .|+.+++++||++|+++|.+|..|+||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 35688899999999999999999888877 7788999999966 78899999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHH
Q psy9757 537 EAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 537 ~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa 605 (659)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. ||+|.+.
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 99999999999999999999988888888999999888888899988888888775 4666654
No 116
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.6e-20 Score=192.19 Aligned_cols=125 Identities=22% Similarity=0.251 Sum_probs=100.0
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCcccCCCCCChHH
Q psy9757 531 DISPLHEAVIADQHDIIRLLRHCGAHLT------NEPMFLGDVLTNAAAR---GMIKRLQSYLLAGINLNQVDSIGLTPL 601 (659)
Q Consensus 531 g~TpL~~Aa~~g~~eivklLl~~ga~~~------~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~gad~n~~d~~g~TpL 601 (659)
..++|+.|+..|+.+.++.+++.|++++ ..+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 3467788888888888888888887743 3466788888888887 778888888888888888888888888
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy9757 602 HAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLNDIIELLKSSETK 655 (659)
Q Consensus 602 h~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~eiv~~Ll~~ga~ 655 (659)
|+|+.+|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888888888888888888888888888888888888888888888888887775
No 117
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=5.7e-20 Score=205.27 Aligned_cols=139 Identities=19% Similarity=0.081 Sum_probs=120.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCcc------CCCCCCHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIR------DNYDISPLHEAVI---ADQHDIIRLLRHCGAHLTNEPMFLGDVL 568 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~------d~~g~TpL~~Aa~---~g~~eivklLl~~ga~~~~~~~~g~t~L 568 (659)
..+.||.|+..|+.++++.||+.|+++|.. +..|.||||+|+. .|+.+++++|+++|+++|.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999999987 8899999999976 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHH
Q psy9757 569 TNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEV 636 (659)
Q Consensus 569 ~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~ 636 (659)
|+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.......+++..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~~~ 279 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSWVI 279 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccccC
Confidence 99999999999999999999999999999999999999999999999999999998754444444333
No 118
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=3.3e-20 Score=198.81 Aligned_cols=160 Identities=23% Similarity=0.162 Sum_probs=120.0
Q ss_pred CCcHHHHHHHHc-CCHHHHHHHHhcCCCcccCC--CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Q psy9757 464 LYPALFQSAVRE-GDIDKIKEMQNYGADISMTD--FDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVI 540 (659)
Q Consensus 464 ~~~t~L~~Aa~~-g~~~iv~~Ll~~ga~vn~~d--~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~ 540 (659)
...++||.|+.. |+++++++|+++|+++|..+ ..|.||||+|+..|+.+++++|+++|+++|.+|..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345789999999 99999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC---CcccCCCCCChHHHHHHHcCC--HHHHHH
Q psy9757 541 ADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGI---NLNQVDSIGLTPLHAAVLNNN--IESVRY 615 (659)
Q Consensus 541 ~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ga---d~n~~d~~g~TpLh~Aa~~g~--~~ivk~ 615 (659)
.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+..+. +....+..+.|+|+.+..... .+-.+.
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ek 357 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEK 357 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHH
Confidence 999999999999999999999999999999999999999999998763 334456678888887765542 233444
Q ss_pred HHHCCCCC
Q psy9757 616 LLSQHVDL 623 (659)
Q Consensus 616 LL~~Gad~ 623 (659)
|..++.++
T Consensus 358 l~r~~~~~ 365 (368)
T 3jue_A 358 LSRRSHDL 365 (368)
T ss_dssp --------
T ss_pred HHhcCCCc
Confidence 54444443
No 119
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.7e-19 Score=152.31 Aligned_cols=90 Identities=31% Similarity=0.422 Sum_probs=42.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q psy9757 498 RRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMI 577 (659)
Q Consensus 498 g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~ 577 (659)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 44555555555555555555555555555555555555555555544444444444444444444444444444444444
Q ss_pred HHHHHHHHcC
Q psy9757 578 KRLQSYLLAG 587 (659)
Q Consensus 578 ~~v~~Ll~~g 587 (659)
+++++|+++|
T Consensus 82 ~~~~~Ll~~g 91 (93)
T 1n0q_A 82 EVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 4444444433
No 120
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.6e-19 Score=152.44 Aligned_cols=92 Identities=29% Similarity=0.411 Sum_probs=60.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHHHcCcH
Q psy9757 564 LGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVANQMQLN 643 (659)
Q Consensus 564 g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ 643 (659)
|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 45666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHhCCCC
Q psy9757 644 DIIELLKSSETK 655 (659)
Q Consensus 644 eiv~~Ll~~ga~ 655 (659)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 666666666653
No 121
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=4e-19 Score=183.35 Aligned_cols=121 Identities=18% Similarity=0.118 Sum_probs=61.6
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCc------ccCCCCCCcHHHHHHHc---CCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Q psy9757 468 LFQSAVREGDIDKIKEMQNYGADI------SMTDFDRRNILHTACSV---GKLDIVKYCLENGVSVHIRDNYDISPLHEA 538 (659)
Q Consensus 468 ~L~~Aa~~g~~~iv~~Ll~~ga~v------n~~d~~g~TpLh~Aa~~---g~~~iv~~LL~~gadin~~d~~g~TpL~~A 538 (659)
.|+.|+..|+.+.++.+++.|+++ +..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|.||||+|
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred hhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH
Confidence 345555555555555555555552 22244455555555555 455555555555555555555555555555
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy9757 539 VIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGI 588 (659)
Q Consensus 539 a~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~ga 588 (659)
+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 213 ~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 213 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 55555555555555555544444444444444444444444444444443
No 122
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=1.9e-19 Score=159.30 Aligned_cols=107 Identities=22% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q psy9757 494 TDFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAA 573 (659)
Q Consensus 494 ~d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~ 573 (659)
+|.+|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 45666777777777777777777777777777666677777777777776666666666666666666666666666666
Q ss_pred cCCHHHHHHHHHcCCCcccCCCCCChH
Q psy9757 574 RGMIKRLQSYLLAGINLNQVDSIGLTP 600 (659)
Q Consensus 574 ~g~~~~v~~Ll~~gad~n~~d~~g~Tp 600 (659)
.|+.+++++|+++|+++|.++..|.||
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666655555554
No 123
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=2.5e-19 Score=158.44 Aligned_cols=109 Identities=22% Similarity=0.202 Sum_probs=102.9
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHH
Q psy9757 526 IRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAV 605 (659)
Q Consensus 526 ~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa 605 (659)
.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCcccCCCcHH
Q psy9757 606 LNNNIESVRYLLSQHVDLTIENKNGQSAI 634 (659)
Q Consensus 606 ~~g~~~ivk~LL~~Gad~~~~d~~G~TpL 634 (659)
..|+.+++++|+++|++++.++..|.+|-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999998874
No 124
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=2.4e-16 Score=138.54 Aligned_cols=91 Identities=29% Similarity=0.392 Sum_probs=71.8
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCcccCCCcHHHHHH
Q psy9757 559 NEPMFLGDVLTNAAARGMIKRLQSYLLAGINLNQVDSIGLTPLHAAVLNNNIESVRYLLSQHVDLTIENKNGQSAIEVAN 638 (659)
Q Consensus 559 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~gad~n~~d~~g~TpLh~Aa~~g~~~ivk~LL~~Gad~~~~d~~G~TpL~~A~ 638 (659)
..+..+.|+||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 45566777788888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCcHHHHHHH
Q psy9757 639 QMQLNDIIELL 649 (659)
Q Consensus 639 ~~g~~eiv~~L 649 (659)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 88888888776
No 125
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=3.1e-16 Score=137.81 Aligned_cols=88 Identities=23% Similarity=0.280 Sum_probs=41.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q psy9757 495 DFDRRNILHTACSVGKLDIVKYCLENGVSVHIRDNYDISPLHEAVIADQHDIIRLLRHCGAHLTNEPMFLGDVLTNAAAR 574 (659)
Q Consensus 495 d~~g~TpLh~Aa~~g~~~iv~~LL~~gadin~~d~~g~TpL~~Aa~~g~~eivklLl~~ga~~~~~~~~g~t~L~~Aa~~ 574 (659)
+.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHc
Confidence 34444555555555555555555544444444444444555444444444444444444444444444444444444444
Q ss_pred CCHHHHHH
Q psy9757 575 GMIKRLQS 582 (659)
Q Consensus 575 g~~~~v~~ 582 (659)
|+.+++++
T Consensus 101 ~~~~~~~~ 108 (110)
T 2zgd_A 101 GNEDLAEI 108 (110)
T ss_dssp TCHHHHHH
T ss_pred CCHHHHHH
Confidence 44444443
No 126
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=44.15 E-value=59 Score=32.21 Aligned_cols=56 Identities=16% Similarity=0.055 Sum_probs=40.8
Q ss_pred CCCCCHHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 312 YPHISNHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 312 ~pg~~~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
.|..+.+.|+.+.+.|++||-+..++.+......+.+.+.++.+.+.|.||++-++
T Consensus 103 ~P~~~~~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~ 158 (294)
T 4i6k_A 103 QHTTTFNELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAP 158 (294)
T ss_dssp CTTCCHHHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCcccHHHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeC
Confidence 34334567788777899999987765432222346788889999999999998876
No 127
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=42.98 E-value=49 Score=35.42 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCcCeEEEEcC------cc--c-HHHHHHHHHHHHhcCCCcEEEe
Q psy9757 155 NMCQVHWIKIANDIKEYYESYDGFVILHG------TD--T-LSYTASALSFMLENLGKPVIVT 208 (659)
Q Consensus 155 ~~~~~~~~~l~~~i~~~~~~~~g~vv~hG------Td--t-~~~ta~~l~~~~~~~~~pvv~t 208 (659)
+.+++.+.+..+.+.+. .++|+++|.+. ++ . -+..+-++.-. . .+||||++
T Consensus 350 ~a~~~~~~~al~~~l~d-p~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~-~-~~kPvvv~ 409 (457)
T 2csu_A 350 SARGEDYYRTAKLLLQD-PNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEV-N-NEKPVLAM 409 (457)
T ss_dssp TCCHHHHHHHHHHHHHS-TTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHH-C-CCCCEEEE
T ss_pred CCCHHHHHHHHHHHhcC-CCCCEEEEEccccccccCCchhHHHHHHHHHHHh-c-CCCCEEEE
Confidence 46777776665555442 35999998771 32 2 23334333331 1 67999874
No 128
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=38.97 E-value=43 Score=32.49 Aligned_cols=59 Identities=7% Similarity=0.052 Sum_probs=38.9
Q ss_pred EEEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 306 VGILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 306 V~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++....+.+. ..++.++..+++|||+.... .....+.++++.+.|+|||...+...+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~-------~~~~~~~~~~~~~~~iPvV~~~~~~~~ 98 (291)
T 3l49_A 36 GTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGN-------LDVLNPWLQKINDAGIPLFTVDTATPH 98 (291)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSC-------HHHHHHHHHHHHHTTCCEEEESCCCTT
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhhhHHHHHHHHHCCCcEEEecCCCCC
Confidence 333333444443 35666777899999987541 124556677888899999998876543
No 129
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=38.03 E-value=34 Score=33.52 Aligned_cols=47 Identities=11% Similarity=0.159 Sum_probs=33.0
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++.++..+++|||+.... +. .+.+.++++.+.|+|||...+...+
T Consensus 52 ~~i~~l~~~~vdgiii~~~~----~~---~~~~~~~~~~~~giPvV~~~~~~~~ 98 (297)
T 3rot_A 52 QFIESALATYPSGIATTIPS----DT---AFSKSLQRANKLNIPVIAVDTRPKD 98 (297)
T ss_dssp HHHHHHHHTCCSEEEECCCC----SS---TTHHHHHHHHHHTCCEEEESCCCSC
T ss_pred HHHHHHHHcCCCEEEEeCCC----HH---HHHHHHHHHHHCCCCEEEEcCCCcc
Confidence 35677778899999995442 11 2344566777889999998876554
No 130
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=35.44 E-value=67 Score=31.56 Aligned_cols=59 Identities=5% Similarity=0.188 Sum_probs=38.8
Q ss_pred EEEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 306 VGILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 306 V~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++......+. +.++.++..+++|||+.+.. +. .+.+.++++.+.|+|||...+...+
T Consensus 33 ~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~~ 95 (313)
T 3m9w_A 33 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN----GQ---VLSNVVKEAKQEGIKVLAYDRMIND 95 (313)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSS----TT---SCHHHHHHHHTTTCEEEEESSCCTT
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCC----hh---hhHHHHHHHHHCCCeEEEECCcCCC
Confidence 333334445554 35677778899999998753 22 2334566777889999998876543
No 131
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=35.19 E-value=69 Score=30.96 Aligned_cols=47 Identities=9% Similarity=0.185 Sum_probs=33.5
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++.++..+++|||+.+.. +. ...+.++++.+.|+|||...+...+
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~~ 101 (293)
T 3l6u_A 55 EQILEFVHLKVDAIFITTLD----DV---YIGSAIEEAKKAGIPVFAIDRMIRS 101 (293)
T ss_dssp HHHHHHHHTTCSEEEEECSC----TT---TTHHHHHHHHHTTCCEEEESSCCCC
T ss_pred HHHHHHHHcCCCEEEEecCC----hH---HHHHHHHHHHHcCCCEEEecCCCCC
Confidence 46677778899999997542 22 2335566777889999998876554
No 132
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=34.90 E-value=61 Score=31.39 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=33.3
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
.++.++..+++|||+.+..... +. ...+.++++.+.|+|||...+...+
T Consensus 63 ~~~~l~~~~vdgiIi~~~~~~~-~~---~~~~~~~~~~~~~iPvV~~~~~~~~ 111 (298)
T 3tb6_A 63 GLENLLSQHIDGLIVEPTKSAL-QT---PNIGYYLNLEKNGIPFAMINASYAE 111 (298)
T ss_dssp HHHHHHHTCCSEEEECCSSTTS-CC---TTHHHHHHHHHTTCCEEEESSCCTT
T ss_pred HHHHHHHCCCCEEEEecccccc-cC---CcHHHHHHHHhcCCCEEEEecCcCC
Confidence 5666777899999997654321 21 1234456677889999998876544
No 133
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=33.62 E-value=33 Score=36.57 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=29.7
Q ss_pred CcCeEEEEcC-cccHHHHHHHHHHHHhc----CCCcEEEecc
Q psy9757 174 SYDGFVILHG-TDTLSYTASALSFMLEN----LGKPVIVTGS 210 (659)
Q Consensus 174 ~~~g~vv~hG-Tdt~~~ta~~l~~~~~~----~~~pvv~tga 210 (659)
..||||++=| ..||+|....|.+..-. .+||||+.|.
T Consensus 245 ~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~ 286 (460)
T 3bq9_A 245 CAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGP 286 (460)
T ss_dssp HCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEEC
T ss_pred hCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEec
Confidence 4689999876 89999999988874211 4899999985
No 134
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=32.40 E-value=53 Score=32.61 Aligned_cols=44 Identities=23% Similarity=0.368 Sum_probs=31.9
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++.++..+++|||+.... +. .+.+.++++.+.|+|||...+..
T Consensus 52 ~i~~li~~~vdgiii~~~~----~~---~~~~~~~~a~~~gipvV~~d~~~ 95 (316)
T 1tjy_A 52 LVNNFVNQGYDAIIVSAVS----PD---GLCPALKRAMQRGVKILTWDSDT 95 (316)
T ss_dssp HHHHHHHTTCSEEEECCSS----SS---TTHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHcCCCEEEEeCCC----HH---HHHHHHHHHHHCcCEEEEecCCC
Confidence 5677788899999997543 12 23445677788999999887653
No 135
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=31.94 E-value=42 Score=36.47 Aligned_cols=68 Identities=18% Similarity=0.085 Sum_probs=45.8
Q ss_pred CCHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCC----CCCCChHHHHHHHH
Q psy9757 156 MCQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISI----FQIRSDGVHNFIGA 228 (659)
Q Consensus 156 ~~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~----~~~~~Dg~~Nl~~a 228 (659)
.|+++..++++.+.. -+++||+|+.+.|-.-+.+..-+ +..++|||++=+-|... +.... ...|+.++
T Consensus 55 ~t~~~~~~~~~~~n~-~~~vdgvi~~~~TFs~a~~~i~~---l~~l~~PvL~~~~q~~~~ip~~~id~-d~m~lnqs 126 (500)
T 4f2d_A 55 TTPDEITAICRDANY-DDRCAGLVVWLHTFSPAKMWING---LTMLNKPLLQFHTQFNAALPWDSIDM-DFMNLNQT 126 (500)
T ss_dssp CSHHHHHHHHHHHHH-CTTEEEEEEECCSCCCTHHHHHH---HHHCCSCEEEEECCSCSSCCTTTCCH-HHHHHCCH
T ss_pred CCHHHHHHHHHHhcc-ccCCcEEEEeCCcCccHHHHHHH---HHhcCCCEEEEeCCCCCCCCccccch-HHHhcccc
Confidence 456777777766631 24699999999999988765322 34568999998876433 33223 56787744
No 136
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=31.88 E-value=58 Score=32.25 Aligned_cols=46 Identities=11% Similarity=0.296 Sum_probs=33.8
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
.++.++..+++|||+.... + ....+.++++.+.|+|||...+...+
T Consensus 51 ~i~~~~~~~vdgiIi~~~~----~---~~~~~~~~~~~~~giPvV~~~~~~~~ 96 (330)
T 3uug_A 51 QIENMVTKGVKVLVIASID----G---TTLSDVLKQAGEQGIKVIAYDRLIRN 96 (330)
T ss_dssp HHHHHHHHTCSEEEECCSS----G---GGGHHHHHHHHHTTCEEEEESSCCCS
T ss_pred HHHHHHHcCCCEEEEEcCC----c---hhHHHHHHHHHHCCCCEEEECCCCCC
Confidence 5677777899999996542 1 23455677788999999998876544
No 137
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=31.64 E-value=52 Score=32.20 Aligned_cols=46 Identities=17% Similarity=0.263 Sum_probs=32.6
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
.++.++..+++|||+.+.. +. ...+.++++.+.|+|||...+...+
T Consensus 53 ~i~~l~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~~ 98 (305)
T 3g1w_A 53 VLEQAIAKNPAGIAISAID----PV---ELTDTINKAVDAGIPIVLFDSGAPD 98 (305)
T ss_dssp HHHHHHHHCCSEEEECCSS----TT---TTHHHHHHHHHTTCCEEEESSCCTT
T ss_pred HHHHHHHhCCCEEEEcCCC----HH---HHHHHHHHHHHCCCcEEEECCCCCC
Confidence 5666677899999996543 11 2344566777889999998876544
No 138
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=29.68 E-value=56 Score=35.33 Aligned_cols=140 Identities=17% Similarity=0.200 Sum_probs=66.7
Q ss_pred HHHHHHcCCHHHH----HHHHhcCCCcccCCCCCCcHHHHHHHc-CC-------------HHHHHHHHHCCCCCCccCCC
Q psy9757 469 FQSAVREGDIDKI----KEMQNYGADISMTDFDRRNILHTACSV-GK-------------LDIVKYCLENGVSVHIRDNY 530 (659)
Q Consensus 469 L~~Aa~~g~~~iv----~~Ll~~ga~vn~~d~~g~TpLh~Aa~~-g~-------------~~iv~~LL~~gadin~~d~~ 530 (659)
|...++.|+++-+ +.+.+.|..+|... ++.|..||.. +. .++.+.+.+.|..+|....
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty- 108 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF- 108 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH-
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH-
Confidence 4445566665433 33344566555433 3344444432 11 2455555666766654321
Q ss_pred CCCHHHHHHHcCCHHHHHHH----HHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH----HHcCCCcccCCCCCChHHH
Q psy9757 531 DISPLHEAVIADQHDIIRLL----RHCGAHLTNEPMFLGDVLTNAAARGMIKRLQSY----LLAGINLNQVDSIGLTPLH 602 (659)
Q Consensus 531 g~TpL~~Aa~~g~~eivklL----l~~ga~~~~~~~~g~t~L~~Aa~~g~~~~v~~L----l~~gad~n~~d~~g~TpLh 602 (659)
.+.+...++.|..+-+.-+ .+.|..++... -.+.|...+..|..+-...+ .+.|..++... -.+.+.
T Consensus 109 -n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~~Li~ 183 (501)
T 4g26_A 109 -TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LAALLK 183 (501)
T ss_dssp -HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHH
T ss_pred -HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HHHHHH
Confidence 2344555666766544333 34455444221 12334445566665443333 34566555432 123445
Q ss_pred HHHHcCCHHHHHHHH
Q psy9757 603 AAVLNNNIESVRYLL 617 (659)
Q Consensus 603 ~Aa~~g~~~ivk~LL 617 (659)
..+..|+.+-+..++
T Consensus 184 ~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 184 VSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHTTCHHHHHHHH
T ss_pred HHhhCCCHHHHHHHH
Confidence 556677766554444
No 139
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=29.51 E-value=78 Score=30.79 Aligned_cols=42 Identities=12% Similarity=0.105 Sum_probs=31.3
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
.++.+++.+++|||+.+.. .....+.++.+.+.|+|||...+
T Consensus 49 ~i~~l~~~~vdgiii~~~~-------~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 49 AIDSLAASGAKGFVICTPD-------PKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHTTCCEEEEECSC-------GGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHcCCCEEEEeCCC-------chhhHHHHHHHHHCCCcEEEeCC
Confidence 5667778899999998642 12344557778889999998874
No 140
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=29.48 E-value=63 Score=31.35 Aligned_cols=60 Identities=7% Similarity=0.001 Sum_probs=38.2
Q ss_pred cEEEEEeC-CCCCHH----HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 305 NVGILRIY-PHISNH----TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 305 ~V~il~~~-pg~~~~----~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+|.+...+ ...+.+ .++.++..+++|||+.+.. .....+.++++.+.|+|||...+...+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~-------~~~~~~~~~~~~~~~iPvV~~~~~~~~ 106 (304)
T 3gbv_A 42 NISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTV-------PQYTKGFTDALNELGIPYIYIDSQIKD 106 (304)
T ss_dssp CEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSS-------GGGTHHHHHHHHHHTCCEEEESSCCTT
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCC-------hHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 45555443 344443 4666777899999997542 112344566677779999998875443
No 141
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=29.32 E-value=2.6e+02 Score=26.52 Aligned_cols=69 Identities=10% Similarity=0.129 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHHhcCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCCC---CCChHHHHHHHHHHHHc
Q psy9757 157 CQVHWIKIANDIKEYYESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIFQ---IRSDGVHNFIGALILAG 233 (659)
Q Consensus 157 ~~~~~~~l~~~i~~~~~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~~---~~~Dg~~Nl~~a~~~a~ 233 (659)
.++...++.+.+.+ .++||||+.-... . ..+.. +...++|||+.+...+... ...|-..--..|.....
T Consensus 48 ~~~~~~~~~~~l~~--~~vdgiIi~~~~~--~---~~~~~-l~~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~ 119 (276)
T 3jy6_A 48 DIEREKTLLRAIGS--RGFDGLILQSFSN--P---QTVQE-ILHQQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFR 119 (276)
T ss_dssp CHHHHHHHHHHHHT--TTCSEEEEESSCC--H---HHHHH-HHTTSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh--CCCCEEEEecCCc--H---HHHHH-HHHCCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHH
Confidence 34444444333332 3599999875544 2 23444 3456899999998766432 34444444444444333
No 142
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=28.12 E-value=79 Score=27.47 Aligned_cols=50 Identities=12% Similarity=0.111 Sum_probs=34.8
Q ss_pred EeCCCCCHHHHHHhHh-CCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 310 RIYPHISNHTVRSFMQ-SPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 310 ~~~pg~~~~~l~~~~~-~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
-+.||...+.+..+++ .+..||||.+ |.-|+ ++++ +.|.+.|+||+.+..
T Consensus 56 ~I~~G~r~~~~l~a~~~~~~~~iIlt~---g~~~~--~~i~---~~A~~~~ipvl~t~~ 106 (139)
T 2ioj_A 56 LVTGGDRSDLLLTALEMPNVRCLILTG---NLEPV--QLVL---TKAEERGVPVILTGH 106 (139)
T ss_dssp EEEETTCHHHHHHHTTCTTEEEEEEET---TCCCC--HHHH---HHHHHHTCCEEECSS
T ss_pred EEEcCCHHHHHHHHHhCCCCcEEEEcC---CCCCC--HHHH---HHHHHCCCeEEEECC
Confidence 3458999888888887 7899999974 23343 2443 455678999997663
No 143
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=26.58 E-value=76 Score=30.20 Aligned_cols=45 Identities=9% Similarity=0.107 Sum_probs=30.3
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
.++.+...+++|||+.+...-+ .+. ++.+.+.|+|||...+...+
T Consensus 50 ~~~~l~~~~vdgiIi~~~~~~~-----~~~---~~~~~~~~iPvV~~~~~~~~ 94 (272)
T 3o74_A 50 LQQLFRARRCDALFVASCLPPE-----DDS---YRELQDKGLPVIAIDRRLDP 94 (272)
T ss_dssp HHHHHHHTTCSEEEECCCCCSS-----CCH---HHHHHHTTCCEEEESSCCCT
T ss_pred HHHHHHHcCCCEEEEecCcccc-----HHH---HHHHHHcCCCEEEEccCCCc
Confidence 5666777899999996543111 123 34566789999998876554
No 144
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=26.30 E-value=92 Score=30.03 Aligned_cols=45 Identities=9% Similarity=0.329 Sum_probs=30.5
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.++..+++|||+.+.. +. ...+.++.+.+.|+|||...+...
T Consensus 49 ~i~~l~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~ 93 (283)
T 2ioy_A 49 NVEDLIQQKVDVLLINPVD----SD---AVVTAIKEANSKNIPVITIDRSAN 93 (283)
T ss_dssp HHHHHHHTTCSEEEECCSS----TT---TTHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHHHHcCCCEEEEeCCc----hh---hhHHHHHHHHHCCCeEEEecCCCC
Confidence 5666777899999996432 22 223345667788999998876543
No 145
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=25.55 E-value=1.9e+02 Score=27.89 Aligned_cols=56 Identities=11% Similarity=0.111 Sum_probs=35.4
Q ss_pred EEEEeCCCCCH----HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCC
Q psy9757 307 GILRIYPHISN----HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCS 369 (659)
Q Consensus 307 ~il~~~pg~~~----~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~ 369 (659)
.++......+. +.++.++..+++|||+.+.. + ....+.++.+.+.|+|||...+..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~----~---~~~~~~~~~~~~~~iPvV~~~~~~ 94 (309)
T 2fvy_A 35 QLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVD----P---AAAGTVIEKARGQNVPVVFFNKEP 94 (309)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSS----G---GGHHHHHHHHHTTTCCEEEESSCC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCC----c---chhHHHHHHHHHCCCcEEEecCCC
Confidence 44433444444 35666777899999995431 1 123445667778899999887653
No 146
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=24.94 E-value=84 Score=30.58 Aligned_cols=51 Identities=14% Similarity=0.039 Sum_probs=36.2
Q ss_pred HHHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEecc
Q psy9757 317 NHTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQ 367 (659)
Q Consensus 317 ~~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq 367 (659)
.+.|+.+.+.|++||-+-....+..+...+.+.+.++.|.+.|+||++-++
T Consensus 95 ~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 145 (288)
T 2ffi_A 95 QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQ 145 (288)
T ss_dssp HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSC
T ss_pred HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeec
Confidence 467777777899999665443332333345688888899999999998664
No 147
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=24.75 E-value=95 Score=30.46 Aligned_cols=45 Identities=18% Similarity=0.346 Sum_probs=31.1
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.++..+++|||+.+.. +. ...+.++++.+.|+|||...+...
T Consensus 49 ~i~~l~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~ 93 (313)
T 2h3h_A 49 MLESFIAEGVNGIAIAPSD----PT---AVIPTIKKALEMGIPVVTLDTDSP 93 (313)
T ss_dssp HHHHHHHTTCSEEEECCSS----TT---TTHHHHHHHHHTTCCEEEESSCCT
T ss_pred HHHHHHHcCCCEEEEeCCC----hH---HHHHHHHHHHHCCCeEEEeCCCCC
Confidence 4666677899999996543 22 233456667788999998876543
No 148
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=23.36 E-value=1.7e+02 Score=31.09 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=25.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcCcCeEEEEcCc
Q psy9757 152 DSSNMCQVHWIKIANDIKEYYESYDGFVILHGT 184 (659)
Q Consensus 152 dS~~~~~~~~~~l~~~i~~~~~~~~g~vv~hGT 184 (659)
=|.+++.++..++|+.+++. .+|||+|+-+|
T Consensus 304 ispd~~~ed~~~iA~~~~~a--GaDgI~v~ntt 334 (443)
T 1tv5_A 304 LAPDLNQEQKKEIADVLLET--NIDGMIISNTT 334 (443)
T ss_dssp ECSCCCHHHHHHHHHHHHHT--TCSEEEECCCB
T ss_pred eCCCCCHHHHHHHHHHHHHc--CCCEEEEECCC
Confidence 36778999999999988873 68999887665
No 149
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=23.06 E-value=93 Score=29.76 Aligned_cols=45 Identities=7% Similarity=0.178 Sum_probs=30.0
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.++..+++|||+.+.. +. ...+.++++.+.|+|||...+...
T Consensus 49 ~i~~l~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~i~~~~~ 93 (271)
T 2dri_A 49 NVQDLTVRGTKILLINPTD----SD---AVGNAVKMANQANIPVITLDRQAT 93 (271)
T ss_dssp HHHHHTTTTEEEEEECCSS----TT---TTHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHHHHcCCCEEEEeCCC----hH---HHHHHHHHHHHCCCcEEEecCCCC
Confidence 4566677789999995432 22 223345666788999999877543
No 150
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=22.89 E-value=1.1e+02 Score=29.32 Aligned_cols=44 Identities=11% Similarity=0.240 Sum_probs=31.7
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSRG 371 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~G 371 (659)
+.++.+...+++|||+.+... .+.++.+.+.|+|||...+...+
T Consensus 54 ~~~~~l~~~~vdgiIi~~~~~----------~~~~~~l~~~~iPvV~i~~~~~~ 97 (276)
T 3jy6_A 54 TLLRAIGSRGFDGLILQSFSN----------PQTVQEILHQQMPVVSVDREMDA 97 (276)
T ss_dssp HHHHHHHTTTCSEEEEESSCC----------HHHHHHHHTTSSCEEEESCCCTT
T ss_pred HHHHHHHhCCCCEEEEecCCc----------HHHHHHHHHCCCCEEEEecccCC
Confidence 356667778999999986542 23455666789999998876543
No 151
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=22.45 E-value=71 Score=30.44 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=31.8
Q ss_pred HHHHhHhCC-CcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSP-MEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~-~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.+++.+ ++|||+.+... . ...+.++++.+.|+|+|...+...
T Consensus 50 ~i~~l~~~~~vdgii~~~~~~----~---~~~~~~~~~~~~~ipvV~~~~~~~ 95 (276)
T 3ksm_A 50 ILSYHLSQAPPDALILAPNSA----E---DLTPSVAQYRARNIPVLVVDSDLA 95 (276)
T ss_dssp HHHHHHHHSCCSEEEECCSST----T---TTHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHHHHhCCCCEEEEeCCCH----H---HHHHHHHHHHHCCCcEEEEecCCC
Confidence 567777788 99999976531 1 223445667788999999877544
No 152
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=21.95 E-value=1.5e+02 Score=28.55 Aligned_cols=47 Identities=9% Similarity=0.289 Sum_probs=0.0
Q ss_pred HHHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC-CCC
Q psy9757 318 HTVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC-SRG 371 (659)
Q Consensus 318 ~~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~-~~G 371 (659)
+.++.++..+++|||+ .|.......+.++.+.+.|+|+|...+. ..+
T Consensus 52 ~~~~~l~~~~vdgiii-------~~~~~~~~~~~~~~~~~~~ipvV~~~~~~~~~ 99 (303)
T 3d02_A 52 KIIEDLIARKVDAITI-------VPNDANVLEPVFKKARDAGIVVLTNESPGQPS 99 (303)
T ss_dssp HHHHHHHHTTCSEEEE-------CCSCHHHHHHHHHHHHHTTCEEEEESCTTCTT
T ss_pred HHHHHHHHcCCCEEEE-------ecCChHHHHHHHHHHHHCCCeEEEEecCCCCC
No 153
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=21.44 E-value=72 Score=30.41 Aligned_cols=36 Identities=28% Similarity=0.337 Sum_probs=27.7
Q ss_pred CcCeEEEEcC-cccHHHHHHHHHHHHhc--CCCcEEEec
Q psy9757 174 SYDGFVILHG-TDTLSYTASALSFMLEN--LGKPVIVTG 209 (659)
Q Consensus 174 ~~~g~vv~hG-Tdt~~~ta~~l~~~~~~--~~~pvv~tg 209 (659)
..|+||++-| ..||+|....+.+.-.. .+||||+.+
T Consensus 131 ~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 131 YAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp TEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred hCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 4689998875 89999999888863222 259999997
No 154
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=21.35 E-value=1.5e+02 Score=29.32 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=31.0
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.++..+++|||+.+.. .....+.++.+.+.|+|||...+...
T Consensus 54 ~i~~l~~~~vdgiIi~~~~-------~~~~~~~~~~~~~~~iPvV~~~~~~~ 98 (325)
T 2x7x_A 54 DVHYFMDEGVDLLIISANE-------AAPMTPIVEEAYQKGIPVILVDRKIL 98 (325)
T ss_dssp HHHHHHHTTCSEEEECCSS-------HHHHHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHHHHcCCCEEEEeCCC-------HHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 5666777899999986431 11234556677788999998877543
No 155
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=21.33 E-value=2.8e+02 Score=26.37 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=32.9
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCCC----CCCChHHHHHHHHHHHHc
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISIF----QIRSDGVHNFIGALILAG 233 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~~----~~~~Dg~~Nl~~a~~~a~ 233 (659)
.++||+|+.-...+- ..+.. +...++|||+.+...+.. ....|-..--..|.....
T Consensus 68 ~~vdgiIi~~~~~~~----~~~~~-l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~ 127 (292)
T 3k4h_A 68 RQIGGIILLYSREND----RIIQY-LHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLI 127 (292)
T ss_dssp TCCCEEEESCCBTTC----HHHHH-HHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCh----HHHHH-HHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHH
Confidence 359999986443332 23343 335589999999887643 234555544455544443
No 156
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=21.15 E-value=2.4e+02 Score=28.09 Aligned_cols=49 Identities=18% Similarity=0.090 Sum_probs=34.2
Q ss_pred CCCHHHHHHhHhCCCcEEEEEecC--CCCCCCCchHHHHHHHHHHhCCCeEE
Q psy9757 314 HISNHTVRSFMQSPMEGVILLTYG--SGNFPSNRSDLIDELRLASDRNVIIV 363 (659)
Q Consensus 314 g~~~~~l~~~~~~~~~giVl~~~G--~G~~p~~~~~~~~~l~~a~~~gi~vV 363 (659)
+++.+.++.+++.+.+.+++.... .|.+.+ ..++.+.++.|.++|+.+|
T Consensus 137 ~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~li 187 (377)
T 3fdb_A 137 GINLHDVEKGFQAGARSILLCNPYNPLGMVFA-PEWLNELCDLAHRYDARVL 187 (377)
T ss_dssp SCCHHHHHHHHHTTCCEEEEESSBTTTTBCCC-HHHHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHhccCCCEEEEeCCCCCCCCCCC-HHHHHHHHHHHHHcCCEEE
Confidence 378899999888788888888763 344443 3355555556778888776
No 157
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=21.07 E-value=1.3e+02 Score=28.86 Aligned_cols=45 Identities=7% Similarity=0.164 Sum_probs=30.3
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccCCC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQCSR 370 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~~~ 370 (659)
.++.++..+++|||+.+.. +. ...+.++++.+.|+|+|...+...
T Consensus 50 ~~~~l~~~~vdgiI~~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~~~ 94 (290)
T 2fn9_A 50 HFDAIIAAGYDAIIFNPTD----AD---GSIANVKRAKEAGIPVFCVDRGIN 94 (290)
T ss_dssp HHHHHHHTTCSEEEECCSC----TT---TTHHHHHHHHHTTCCEEEESSCCS
T ss_pred HHHHHHHcCCCEEEEecCC----hH---HHHHHHHHHHHCCCeEEEEecCCC
Confidence 5666777899999996542 11 223345566678999998876543
No 158
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=21.06 E-value=2.3e+02 Score=27.39 Aligned_cols=53 Identities=17% Similarity=0.067 Sum_probs=31.3
Q ss_pred cCcCeEEEEcCcccHHHHHHHHHHHHhcCCCcEEEeccCCCC--CCCCChHHHHHHHHHH
Q psy9757 173 ESYDGFVILHGTDTLSYTASALSFMLENLGKPVIVTGSQISI--FQIRSDGVHNFIGALI 230 (659)
Q Consensus 173 ~~~~g~vv~hGTdt~~~ta~~l~~~~~~~~~pvv~tga~~p~--~~~~~Dg~~Nl~~a~~ 230 (659)
.++||+|+.-...+-++ .+.. +.. ++|||+.+...+. ....+|-..--..|+.
T Consensus 70 ~~vdgiI~~~~~~~~~~---~~~~-l~~-~iPvV~i~~~~~~~~~~V~~D~~~~g~~a~~ 124 (303)
T 3kke_A 70 GRVDGVLLQRREDFDDD---MLAA-VLE-GVPAVTINSRVPGRVGSVILDDQKGGGIATE 124 (303)
T ss_dssp CSSSEEEECCCTTCCHH---HHHH-HHT-TSCEEEESCCCTTCCCEEEECHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCcHH---HHHH-HhC-CCCEEEECCcCCCCCCEEEECcHHHHHHHHH
Confidence 35999999765544331 3444 335 8999999987764 2234444444444443
No 159
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=20.70 E-value=97 Score=30.00 Aligned_cols=43 Identities=12% Similarity=0.223 Sum_probs=29.1
Q ss_pred HHHHhHhCCCcEEEEEecCCCCCCCCchHHHHHHHHHHhCCCeEEEeccC
Q psy9757 319 TVRSFMQSPMEGVILLTYGSGNFPSNRSDLIDELRLASDRNVIIVNCSQC 368 (659)
Q Consensus 319 ~l~~~~~~~~~giVl~~~G~G~~p~~~~~~~~~l~~a~~~gi~vV~~sq~ 368 (659)
.++.++..+++|||+.+.. +. ...+.++++.+.|+|||...+.
T Consensus 51 ~~~~~~~~~vdgiIi~~~~----~~---~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 51 LFEDLSNKNYKGIAFAPLS----SV---NLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp HHHHHHTSSEEEEEECCSS----SS---TTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHcCCCEEEEeCCC----hH---HHHHHHHHHHHCCCeEEEECCC
Confidence 4666677889999996432 11 2233456667789999988764
Done!