BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9762
(112 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242247315|ref|NP_001156198.1| mediator of RNA polymerase II transcription subunit 11
[Acyrthosiphon pisum]
gi|239789770|dbj|BAH71487.1| ACYPI005820 [Acyrthosiphon pisum]
Length = 126
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/108 (75%), Positives = 93/108 (86%), Gaps = 2/108 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ L+ IEKDIITCLQSAGQALLELSKEKSSLKQ E+QSH FLK+L +VE+KLTEQI
Sbjct: 5 MERIQALELIEKDIITCLQSAGQALLELSKEKSSLKQVENQSHQFLKSLGNVESKLTEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADYF 106
NYLTQVSTGQP+E SGYASQKVLQMAWHR AR ++ ++ +S+ Y
Sbjct: 65 NYLTQVSTGQPYENSGYASQKVLQMAWHRLEHARSRVKELERSKNKYL 112
>gi|383864783|ref|XP_003707857.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Megachile rotundata]
Length = 112
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +ELSKEKSSLKQAE+Q+ FLKTL HVE+KL+EQI
Sbjct: 5 MERIQILETIEKDIIVCLQSAGQAFVELSKEKSSLKQAEAQTQQFLKTLGHVESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|66552919|ref|XP_625097.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Apis mellifera]
gi|380028617|ref|XP_003697991.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Apis florea]
Length = 112
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +ELSKEKSSLKQAE+Q+ FLKTL HVE+KL+EQI
Sbjct: 5 MERIQILETIEKDIIVCLQSAGQAFVELSKEKSSLKQAEAQTQQFLKTLGHVESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|350420514|ref|XP_003492533.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Bombus impatiens]
Length = 112
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +ELSKEKSS+KQAE+Q+ FLKTL HVE+KL+EQI
Sbjct: 5 MERIQILETIEKDIIVCLQSAGQAFVELSKEKSSMKQAEAQTQQFLKTLGHVESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|307190360|gb|EFN74419.1| Mediator of RNA polymerase II transcription subunit 11 [Camponotus
floridanus]
Length = 112
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +ELSKEKSSLKQAESQ+H FLKTL +E+KL+EQI
Sbjct: 5 MERIQILETIEKDIIICLQSAGQACMELSKEKSSLKQAESQTHQFLKTLGQLESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|242007810|ref|XP_002424714.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508207|gb|EEB11976.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 133
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 91/100 (91%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ERIQVLD IEKDIITCLQSAGQAL+ELSK+KSSLK +E Q+H FLKTL+ VE+KLTEQI
Sbjct: 5 VERIQVLDAIEKDIITCLQSAGQALIELSKDKSSLKLSEGQTHQFLKTLNLVESKLTEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|332023155|gb|EGI63411.1| Mediator of RNA polymerase II transcription subunit 11 [Acromyrmex
echinatior]
Length = 112
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDI+ CLQSAGQA +ELSKEKSSLKQAESQ+H FLKTL +E+KL+EQI
Sbjct: 5 MERIQILETIEKDIVVCLQSAGQACMELSKEKSSLKQAESQTHQFLKTLGQLESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|322789046|gb|EFZ14504.1| hypothetical protein SINV_12601 [Solenopsis invicta]
Length = 112
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 89/100 (89%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +EL KEKSSLKQAESQ+H FLKTL +E+KL+EQI
Sbjct: 5 MERIQILETIEKDIIVCLQSAGQACMELGKEKSSLKQAESQTHQFLKTLGQLESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|91083293|ref|XP_974541.1| PREDICTED: similar to Mediator complex subunit 11 CG6884-PA
[Tribolium castaneum]
gi|270007731|gb|EFA04179.1| hypothetical protein TcasGA2_TC014428 [Tribolium castaneum]
Length = 132
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 87/100 (87%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQVLD IEKDIITCL SAGQ +ELSKEKSSLKQAE+ + FLKTL VE+KLTEQI
Sbjct: 5 MERIQVLDSIEKDIITCLHSAGQVFVELSKEKSSLKQAENHTQTFLKTLGAVESKLTEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 104
>gi|332372664|gb|AEE61474.1| unknown [Dendroctonus ponderosae]
Length = 152
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 90/108 (83%), Gaps = 2/108 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+LD IEKDIITCL SAGQ LELSKEKSSLKQAE+ + FLKTL VE KLT+QI
Sbjct: 5 MERIQLLDSIEKDIITCLNSAGQVFLELSKEKSSLKQAENHTQTFLKTLGAVENKLTDQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADYF 106
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++ + + +F
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNELDKIKLKHF 112
>gi|357623604|gb|EHJ74690.1| hypothetical protein KGM_16308 [Danaus plexippus]
Length = 130
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/89 (83%), Positives = 81/89 (91%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ERIQVLD+IEKDIITCLQ A QALLEL KEKSS KQAES + FL+TLS VE+KL++QI
Sbjct: 5 IERIQVLDEIEKDIITCLQCAAQALLELGKEKSSQKQAESNTSQFLRTLSQVESKLSDQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYLTQVSTGQPHEGSGYASQKVLQMAWHR
Sbjct: 65 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 93
>gi|156537073|ref|XP_001602106.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Nasonia vitripennis]
Length = 159
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDIITCLQSAGQA +ELSK+K + KQAE Q+H F+KTL VE+KL++QI
Sbjct: 5 MERIQILEAIEKDIITCLQSAGQAFMELSKDKPNSKQAEGQTHQFIKTLGLVESKLSDQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYLTQVSTGQPHEGSGY SQKVLQMAWHR
Sbjct: 65 NYLTQVSTGQPHEGSGYESQKVLQMAWHR 93
>gi|195378526|ref|XP_002048034.1| GJ11572 [Drosophila virilis]
gi|194155192|gb|EDW70376.1| GJ11572 [Drosophila virilis]
Length = 189
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEKDII C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKDIILCMQSAGQALQELGKEKSSQKSAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195022961|ref|XP_001985671.1| GH14372 [Drosophila grimshawi]
gi|193899153|gb|EDV98019.1| GH14372 [Drosophila grimshawi]
Length = 183
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEKDII C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKDIILCMQSAGQALQELGKEKSSQKSAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195129733|ref|XP_002009309.1| GI11315 [Drosophila mojavensis]
gi|193920918|gb|EDW19785.1| GI11315 [Drosophila mojavensis]
Length = 181
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEKDII C+QSAGQAL EL KEK+S K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKDIILCMQSAGQALQELGKEKTSQKSAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195352222|ref|XP_002042613.1| GM14990 [Drosophila sechellia]
gi|194124497|gb|EDW46540.1| GM14990 [Drosophila sechellia]
Length = 190
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ D+
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRDL 103
>gi|195160894|ref|XP_002021307.1| GL24880 [Drosophila persimilis]
gi|198465090|ref|XP_001353491.2| GA19929 [Drosophila pseudoobscura pseudoobscura]
gi|194118420|gb|EDW40463.1| GL24880 [Drosophila persimilis]
gi|198150010|gb|EAL31002.2| GA19929 [Drosophila pseudoobscura pseudoobscura]
Length = 181
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195591342|ref|XP_002085401.1| GD14767 [Drosophila simulans]
gi|194197410|gb|EDX10986.1| GD14767 [Drosophila simulans]
Length = 176
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|21358009|ref|NP_649057.1| mediator complex subunit 11 [Drosophila melanogaster]
gi|74871226|sp|Q9VVS4.1|MED11_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11; AltName:
Full=dMED21
gi|7293870|gb|AAF49235.1| mediator complex subunit 11 [Drosophila melanogaster]
gi|20976806|gb|AAM27478.1| GH01072p [Drosophila melanogaster]
gi|220949924|gb|ACL87505.1| MED11-PA [synthetic construct]
gi|220959006|gb|ACL92046.1| MED11-PA [synthetic construct]
Length = 176
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195494516|ref|XP_002094871.1| GE19972 [Drosophila yakuba]
gi|194180972|gb|EDW94583.1| GE19972 [Drosophila yakuba]
Length = 176
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|195440410|ref|XP_002068035.1| GK12088 [Drosophila willistoni]
gi|194164120|gb|EDW79021.1| GK12088 [Drosophila willistoni]
Length = 207
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|194871265|ref|XP_001972812.1| GG13675 [Drosophila erecta]
gi|190654595|gb|EDV51838.1| GG13675 [Drosophila erecta]
Length = 174
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|194751793|ref|XP_001958208.1| GF23639 [Drosophila ananassae]
gi|190625490|gb|EDV41014.1| GF23639 [Drosophila ananassae]
Length = 179
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++I LD+IEK+II C+QSAGQAL EL KEKSS K AE+QS FLK+LS VE+KL+EQI
Sbjct: 4 LDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQSEADY 105
NYLTQVSTGQPHEGSGYAS KVLQMAWHR AR ++ ++ +++A +
Sbjct: 64 NYLTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110
>gi|307198243|gb|EFN79243.1| Mediator of RNA polymerase II transcription subunit 11
[Harpegnathos saltator]
Length = 116
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 86/100 (86%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ERIQ+LD IEK++I CLQSAG A+ EL KEKSS+KQ E + +FLK+L+ VE+KL+EQI
Sbjct: 9 IERIQLLDTIEKEVINCLQSAGAAISELGKEKSSMKQVEQNTTHFLKSLAVVESKLSEQI 68
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGSGYASQKVLQMAWHR AR +++++
Sbjct: 69 NYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHARSRVNEL 108
>gi|340709740|ref|XP_003393460.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Bombus terrestris]
Length = 93
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 75/81 (92%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
MERIQ+L+ IEKDII CLQSAGQA +ELSKEKSS+KQAE+Q+ F+KTL HVE+KL+EQI
Sbjct: 5 MERIQILETIEKDIIVCLQSAGQAFVELSKEKSSVKQAEAQTQQFIKTLGHVESKLSEQI 64
Query: 61 NYLTQVSTGQPHEGSGYASQK 81
NYLTQVSTGQPHEGSGYASQK
Sbjct: 65 NYLTQVSTGQPHEGSGYASQK 85
>gi|170031817|ref|XP_001843780.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871179|gb|EDS34562.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 127
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 80/89 (89%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++IQVLD IEK++I CLQSAGQALLELSKEK+S K E+ ++ FLK+L+ VE+KL+EQI
Sbjct: 4 IDKIQVLDSIEKELILCLQSAGQALLELSKEKTSQKATETHTNQFLKSLNIVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYLTQVSTGQPHEGSGYA+ KVLQMAWHR
Sbjct: 64 NYLTQVSTGQPHEGSGYAAAKVLQMAWHR 92
>gi|157108495|ref|XP_001650252.1| hypothetical protein AaeL_AAEL000720 [Aedes aegypti]
gi|121957682|sp|Q17NH9.1|MED11_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|108884012|gb|EAT48237.1| AAEL000720-PA [Aedes aegypti]
Length = 132
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 80/89 (89%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++IQVLD IEK+++ CLQSAGQALLELSKEK+S K E+ ++ FLK+L+ VE+KL+EQI
Sbjct: 4 IDKIQVLDSIEKELLLCLQSAGQALLELSKEKTSQKATETHTNQFLKSLNIVESKLSEQI 63
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYLTQVSTGQPHEGSGYA+ KVLQMAWHR
Sbjct: 64 NYLTQVSTGQPHEGSGYAAAKVLQMAWHR 92
>gi|321461062|gb|EFX72097.1| hypothetical protein DAPPUDRAFT_59321 [Daphnia pulex]
Length = 123
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 72/89 (80%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ER+Q LD +EK+I +C+QSAGQAL ELSK+K+S+KQ ES + FLKTL+HVE +L++ I
Sbjct: 3 IERLQALDNVEKEIASCIQSAGQALTELSKDKASMKQVESHTSLFLKTLNHVEGELSKHI 62
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYLTQVSTG PHEG+ Y S K+ + A HR
Sbjct: 63 NYLTQVSTGSPHEGTSYGSVKMYKTARHR 91
>gi|405970235|gb|EKC35163.1| Mediator of RNA polymerase II transcription subunit 11 [Crassostrea
gigas]
Length = 135
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
++R++ L+ +E D+I+ +QSAG AL ELSK+K +K ES + F+KTL VE KLT I
Sbjct: 11 VDRLKQLETVESDVISAIQSAGSALQELSKDKPVMKNVESHTTTFIKTLVEVEKKLTGHI 70
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQVSTGQPHEGS YA QK L +A+HR R ++SD+
Sbjct: 71 NYLTQVSTGQPHEGSSYAPQKDLLLAYHRVDHIRSRLSDL 110
>gi|242000898|ref|XP_002435092.1| mediator complex subunit, putative [Ixodes scapularis]
gi|215498422|gb|EEC07916.1| mediator complex subunit, putative [Ixodes scapularis]
Length = 156
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
+++ L+ IEKD+ T LQSAGQ LELSK+K + KQ +S + F+KTL +VE LT+ I Y
Sbjct: 10 KLKELEDIEKDVATALQSAGQVCLELSKDKPNAKQVDSNATAFVKTLQNVENSLTKHILY 69
Query: 63 LTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
LTQVST QPHEGS YA+QKV MA HR AR +++++
Sbjct: 70 LTQVSTVQPHEGSSYAAQKVFHMALHRLEHARSRMNEL 107
>gi|391331019|ref|XP_003739948.1| PREDICTED: uncharacterized protein LOC100901194 [Metaseiulus
occidentalis]
Length = 271
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 9/112 (8%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
+++ LD IEKD+ L +AGQAL EL K+K +LK E+ + NFLKTL VE+ L++ I Y
Sbjct: 10 KLKELDDIEKDVAQALHAAGQALTELGKDKPTLKPVEANTTNFLKTLQSVESNLSKHIVY 69
Query: 63 LTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV-------IQSEADY 105
L+QVST QPHEGS YA+QKV MA HR AR +++++ +Q +A Y
Sbjct: 70 LSQVSTVQPHEGSNYAAQKVFHMALHRLEHARSRMNELERVRQSHLQQDAQY 121
>gi|354469665|ref|XP_003497246.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Cricetulus griseus]
gi|344237824|gb|EGV93927.1| Mediator of RNA polymerase II transcription subunit 11 [Cricetulus
griseus]
Length = 117
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQASAFTTSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR +ISDV+++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKISDVVRT 110
>gi|74140293|dbj|BAE43156.1| unnamed protein product [Mus musculus]
Length = 117
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTTSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR +ISDV+++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKISDVVRT 110
>gi|260796565|ref|XP_002593275.1| hypothetical protein BRAFLDRAFT_123635 [Branchiostoma floridae]
gi|229278499|gb|EEN49286.1| hypothetical protein BRAFLDRAFT_123635 [Branchiostoma floridae]
Length = 120
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ER+Q L+ IEK+I LQ+AG A+ EL K+K + +Q + + FLK+L VE+ L+++I
Sbjct: 7 VERLQALESIEKEIAAVLQNAGLAVQELCKDKPNERQLDRHTGQFLKSLQDVESGLSQEI 66
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
NYLTQV+TGQPHEGS Y++QK QMA HR A+++++D+
Sbjct: 67 NYLTQVATGQPHEGSSYSAQKETQMALHRVEHAKKRLADL 106
>gi|149053187|gb|EDM05004.1| similar to RIKEN cDNA 1110030J09 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 117
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR +ISDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKISDVART 110
>gi|27754138|ref|NP_079673.2| mediator of RNA polymerase II transcription subunit 11 [Mus
musculus]
gi|81905640|sp|Q9D8C6.1|MED11_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|12842164|dbj|BAB25497.1| unnamed protein product [Mus musculus]
gi|19263527|gb|AAH25057.1| Mediator of RNA polymerase II transcription, subunit 11 homolog (S.
cerevisiae) [Mus musculus]
gi|123234449|emb|CAM28187.1| mediator of RNA polymerase II transcription, subunit 11 homolog (S.
cerevisiae) [Mus musculus]
gi|148680617|gb|EDL12564.1| mediator of RNA polymerase II transcription, subunit 11 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 117
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTTSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR +ISDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKISDVART 110
>gi|427781647|gb|JAA56275.1| Putative mediator of rna polymerase ii transcription subunit 11
[Rhipicephalus pulchellus]
Length = 133
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 14 IITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVSTGQPHE 73
+ + LQSAGQA LELS+EK S+KQ ES + +FL TL +VE LT+ I YLTQVST QPHE
Sbjct: 18 VASALQSAGQACLELSREKPSMKQVESNTSSFLTTLQNVEAALTKHILYLTQVSTVQPHE 77
Query: 74 GSGYASQKVLQMAWHR--SARQQISDV 98
GS YA+QKV MA HR AR +++++
Sbjct: 78 GSSYAAQKVFHMALHRLEHARSRMNEL 104
>gi|410979667|ref|XP_003996203.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Felis catus]
Length = 117
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEKS+ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKSNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|443697044|gb|ELT97613.1| hypothetical protein CAPTEDRAFT_175848 [Capitella teleta]
Length = 140
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 60/89 (67%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+++IQ L+ IE DI +QS+ AL ELSK+K S+KQ E S NFLK L VE L EQ+
Sbjct: 5 VDKIQQLETIEIDIAAAIQSSAHALTELSKDKPSIKQVELHSSNFLKKLESVENNLVEQL 64
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YL QVSTG PHEGS Y+ K MA+HR
Sbjct: 65 KYLAQVSTGHPHEGSSYSGLKDAHMAYHR 93
>gi|6841242|gb|AAF28974.1|AF161414_1 HSPC296 [Homo sapiens]
Length = 136
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 28 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 87
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 88 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 129
>gi|48717372|ref|NP_001001683.1| mediator of RNA polymerase II transcription subunit 11 [Homo
sapiens]
gi|114665808|ref|XP_001161315.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Pan troglodytes]
gi|194217573|ref|XP_001503009.2| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Equus caballus]
gi|296202268|ref|XP_002748321.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Callithrix jacchus]
gi|345800557|ref|XP_849319.2| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Canis lupus familiaris]
gi|397477790|ref|XP_003810252.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Pan paniscus]
gi|403279826|ref|XP_003931445.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Saimiri boliviensis boliviensis]
gi|426383621|ref|XP_004058377.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Gorilla gorilla gorilla]
gi|158564056|sp|Q9P086.2|MED11_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|47123524|gb|AAH70377.1| Mediator complex subunit 11 [Homo sapiens]
gi|119610823|gb|EAW90417.1| similar to HSPC296, isoform CRA_a [Homo sapiens]
gi|410206882|gb|JAA00660.1| mediator complex subunit 11 [Pan troglodytes]
gi|410263568|gb|JAA19750.1| mediator complex subunit 11 [Pan troglodytes]
gi|410288814|gb|JAA23007.1| mediator complex subunit 11 [Pan troglodytes]
gi|410330601|gb|JAA34247.1| mediator complex subunit 11 [Pan troglodytes]
Length = 117
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|417407933|gb|JAA50558.1| Putative mediator of rna polymerase ii transcription subunit 11,
partial [Desmodus rotundus]
Length = 131
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 23 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 82
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 83 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 124
>gi|351710648|gb|EHB13567.1| Mediator of RNA polymerase II transcription subunit 11
[Heterocephalus glaber]
gi|444722970|gb|ELW63642.1| Mediator of RNA polymerase II transcription subunit 11 [Tupaia
chinensis]
Length = 117
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|348561051|ref|XP_003466326.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Cavia porcellus]
Length = 117
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQSEADYFG 107
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++ G
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVARTCEQMLG 116
>gi|432090764|gb|ELK24094.1| Mediator of RNA polymerase II transcription subunit 11 [Myotis
davidii]
Length = 117
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTTSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|302563387|ref|NP_001180943.1| mediator of RNA polymerase II transcription subunit 11 [Macaca
mulatta]
gi|402898348|ref|XP_003912185.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Papio anubis]
gi|355568114|gb|EHH24395.1| Mediator complex subunit 11 [Macaca mulatta]
gi|355753639|gb|EHH57604.1| Mediator complex subunit 11 [Macaca fascicularis]
gi|380787349|gb|AFE65550.1| mediator of RNA polymerase II transcription subunit 11 [Macaca
mulatta]
gi|383414659|gb|AFH30543.1| mediator of RNA polymerase II transcription subunit 11 [Macaca
mulatta]
gi|384943752|gb|AFI35481.1| mediator of RNA polymerase II transcription subunit 11 [Macaca
mulatta]
Length = 117
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVLHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|355701666|gb|AES01757.1| mediator complex subunit 11 [Mustela putorius furo]
Length = 116
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSGQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 110
>gi|291233913|ref|XP_002736888.1| PREDICTED: mediator complex subunit 11-like [Saccoglossus
kowalevskii]
Length = 117
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER+ LD IEK++ T L +AGQA+ ELSKEK + E + FLK+L VE LT+QIN
Sbjct: 11 ERLLQLDSIEKEVSTILLNAGQAIQELSKEKPNEANLELYTQKFLKSLETVEGGLTKQIN 70
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDV 98
YL+QVSTG PHEGS Y++QK +MA HR AR +++++
Sbjct: 71 YLSQVSTGHPHEGSSYSAQKEARMALHRLEHARMKLNEL 109
>gi|426237428|ref|XP_004012662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Ovis aries]
gi|296476736|tpg|DAA18851.1| TPA: mediator of RNA polymerase II transcription subunit 11 [Bos
taurus]
gi|440897060|gb|ELR48832.1| Mediator of RNA polymerase II transcription subunit 11 [Bos
grunniens mutus]
Length = 117
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++S+V ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSEVART 110
>gi|84000139|ref|NP_001033173.1| mediator of RNA polymerase II transcription subunit 11 [Bos taurus]
gi|122138684|sp|Q32L03.1|MED11_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|81674077|gb|AAI09829.1| Mediator complex subunit 11 [Bos taurus]
Length = 117
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR--SARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++S+V ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRLDYARLKLSEVART 110
>gi|148680616|gb|EDL12563.1| mediator of RNA polymerase II transcription, subunit 11 homolog
(S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 108
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 65/88 (73%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTTSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YLTQV+TGQPHEGS Y+S+K QMA R
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKR 96
>gi|126309266|ref|XP_001370756.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Monodelphis domestica]
Length = 117
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I T LQSAG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGTILQSAGNVILELSKEKANERLLDRQAAAFTSSVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHE S Y+S+K QMA R AR ++S++ ++
Sbjct: 69 YLTQVATGQPHESSSYSSRKDCQMALKRVDYARLKLSELART 110
>gi|348605718|ref|NP_001231752.1| mediator of RNA polymerase II transcription subunit 11 [Sus scrofa]
Length = 117
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++++V ++
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLNEVART 110
>gi|156403674|ref|XP_001640033.1| predicted protein [Nematostella vectensis]
gi|156227165|gb|EDO47970.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L++IEKDI+ +QSAG+ + ELS E S ++ F+K+L VE LTEQIN
Sbjct: 6 DRLKQLEEIEKDIVKVMQSAGETIAELSNENPSEDMVNMKATEFVKSLEGVEKGLTEQIN 65
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRSA 91
YLTQV+TGQPHEGS Y K ++A R+A
Sbjct: 66 YLTQVATGQPHEGSTYGVDKDFELATSRTA 95
>gi|157786630|ref|NP_001099269.1| mediator of RNA polymerase II transcription subunit 11 [Rattus
norvegicus]
gi|149053188|gb|EDM05005.1| similar to RIKEN cDNA 1110030J09 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 135
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 65/88 (73%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+ IE++I LQ+AG A+LELSKEK++ + + Q+ F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YLTQV+TGQPHEGS Y+S+K QMA R
Sbjct: 69 YLTQVATGQPHEGSSYSSRKDCQMALKR 96
>gi|395537534|ref|XP_003770753.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like, partial [Sarcophilus harrisii]
Length = 105
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 7 LDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQV 66
L+ IE++I T LQSAG +LELSKEK++ + + Q+ F ++ HVE +L+ QI YLTQV
Sbjct: 2 LEDIEREIGTILQSAGNVILELSKEKANERLLDRQAAAFTSSVQHVEAELSAQIRYLTQV 61
Query: 67 STGQPHEGSGYASQKVLQMAWHRS--ARQQISDV 98
+TGQPHEGS Y+S+K QMA R AR ++S++
Sbjct: 62 ATGQPHEGSSYSSRKDCQMALKRVDYARLKLSEL 95
>gi|297699711|ref|XP_002826917.1| PREDICTED: mediator of RNA polymerase II transcription subunit 11
[Pongo abelii]
Length = 118
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHN-FLKTLSHVETKLTEQI 60
ER++ L+ IE++I LQ+AG +LELSKEK++ + + + F ++ HVE +L+ QI
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRPAGGGFTASVQHVEAELSAQI 68
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 69 RYLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 111
>gi|126632093|gb|AAI33895.1| Med11 protein [Danio rerio]
Length = 131
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 66/89 (74%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+ +EK+I LQSAG +LELSKEK++ + Q + F +++ VE++L+ QI
Sbjct: 21 DRLRALEDVEKEIALVLQSAGTIVLELSKEKANASLLDRQLNQFQTSINRVESELSSQIR 80
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 81 YLTQVATGQPHEGSTYSARKDCQMALNRA 109
>gi|229892312|ref|NP_001153507.1| mediator of RNA polymerase II transcription subunit 11 [Danio
rerio]
gi|326671234|ref|XP_003199394.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Danio rerio]
gi|158513700|sp|A3KNK7.2|MED11_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
Length = 114
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 66/89 (74%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+ +EK+I LQSAG +LELSKEK++ + Q + F +++ VE++L+ QI
Sbjct: 4 DRLRALEDVEKEIALVLQSAGTIVLELSKEKANASLLDRQLNQFQTSINRVESELSSQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|147901784|ref|NP_001087540.1| mediator of RNA polymerase II transcription subunit 11 [Xenopus
laevis]
gi|82181750|sp|Q68EW7.1|MED11_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|51261683|gb|AAH80083.1| MGC84174 protein [Xenopus laevis]
Length = 118
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 64/88 (72%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L++IE++I L +AG A+LELSKEK + + + Q+ F ++ VE++L+ QI
Sbjct: 9 ERLRALEEIEREIAAILLNAGNAILELSKEKPNERMLDKQAAQFTASVQRVESELSGQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YLTQV+TGQPHEGS Y+++K MA +R
Sbjct: 69 YLTQVATGQPHEGSSYSARKDGTMALNR 96
>gi|213514784|ref|NP_001134394.1| mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
gi|209732944|gb|ACI67341.1| Mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
gi|223646162|gb|ACN09839.1| Mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
gi|223672009|gb|ACN12186.1| Mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
gi|303659465|gb|ADM15960.1| Mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
Length = 114
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 63/89 (70%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+++E I T LQ AG +LELSK+K + + Q F ++S VET+L+ QI
Sbjct: 4 DRLRALEEVENQIATILQCAGNIVLELSKDKHNASFLDRQLSQFTGSVSRVETELSSQIK 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|431893965|gb|ELK03771.1| Mediator of RNA polymerase II transcription subunit 11 [Pteropus
alecto]
Length = 160
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 14/114 (12%)
Query: 2 ERIQVLDQIEKDIITCLQSAG------------QALLELSKEKSSLKQAESQSHNFLKTL 49
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q+ F ++
Sbjct: 40 ERLRALEDIEREIGAILQNAGWGYDDREEGSESTVILELSKEKTNERLLDRQAAAFTASV 99
Query: 50 SHVETKLTEQINYLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
HVE +L+ QI YLTQV+TGQPHEGS Y+S+K QMA R AR ++SDV ++
Sbjct: 100 QHVEAELSAQIRYLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKLSDVART 153
>gi|443690916|gb|ELT92917.1| hypothetical protein CAPTEDRAFT_144410 [Capitella teleta]
Length = 134
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ERI+ L+ +E+D+ + LQ A QAL E++KEK + KQ E+ S F+K L VE L EQ+
Sbjct: 6 ERIKQLEDVERDVTSSLQCAAQALAEMTKEKPNAKQIEASSTQFIKKLEGVEKTLVEQLQ 65
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YL STGQ HEGS YA K LQM R
Sbjct: 66 YLASYSTGQSHEGSSYARSKDLQMTNQR 93
>gi|432921345|ref|XP_004080112.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Oryzias latipes]
Length = 121
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEK--SSLKQAESQSHNFLKTLSHVETKLTEQ 59
ER++VL+++EK+I LQ AG +LELSK+K ++ K+ E Q F + + VE++L+ Q
Sbjct: 4 ERLRVLEEVEKEIAMVLQCAGIIVLELSKDKQIANWKEVERQLLQFQSSTNRVESELSAQ 63
Query: 60 INYLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
I YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 IRYLTQVATGQPHEGSTYSARKDCQMALNRA 94
>gi|221221076|gb|ACM09199.1| Mediator of RNA polymerase II transcription subunit 11 [Salmo
salar]
Length = 114
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 63/89 (70%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+++E I T LQ AG +LELSK+K + + Q F +++ VET+L+ QI
Sbjct: 4 DRLRALEEVENQIATILQCAGNVVLELSKDKHNASFLDRQLSQFTGSVNRVETELSSQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|390368450|ref|XP_791981.3| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like, partial [Strongylocentrotus purpuratus]
Length = 136
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
ME+I L Q+ L + +LELSK++ KQ +S + F KTL VE +L EQI
Sbjct: 35 MEQINYLSQVR-----VLGELRKVILELSKDRPVEKQIDSNTKTFAKTLEAVEKRLMEQI 89
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQMAWHR 89
NYL+QVSTGQPHEGS Y++QK QMA HR
Sbjct: 90 NYLSQVSTGQPHEGSSYSAQKEAQMAIHR 118
>gi|317615897|ref|NP_001187819.1| mediator of RNA polymerase II transcription subunit 11 [Ictalurus
punctatus]
gi|308324057|gb|ADO29164.1| mediator of RNA polymerase II transcription subunit 11 [Ictalurus
punctatus]
Length = 114
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 63/89 (70%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+ +EK+I LQ AG +LELSKEK + + Q + F +++ +E +L+ QI
Sbjct: 4 DRLRALEDVEKEIAVVLQCAGTIVLELSKEKHNASLLDRQLNQFQTSINRIENELSSQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|410906693|ref|XP_003966826.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Takifugu rubripes]
Length = 116
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 64/89 (71%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L+++EK+I LQ AG +LELSK+K + + Q F +++ VE++L+ QI
Sbjct: 4 ERLRALEEVEKEIAMVLQCAGNIVLELSKDKHNASLLDRQLVQFQSSVNRVESELSGQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+S+K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSSRKDCQMALNRA 92
>gi|301778115|ref|XP_002924517.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 11-like [Ailuropoda melanoleuca]
Length = 120
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 5/105 (4%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQS---HNFLKTLSHVETKLTE 58
ER++ L+ IE++I LQ+AG +LELSKEK++ + + Q ++ HVE +L+
Sbjct: 9 ERLRALEDIEREIGAILQNAGTVILELSKEKTNERLLDRQGGXXXXXTASVQHVEAELSA 68
Query: 59 QINYLTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
QI YLTQV+TGQPHEGS Y+S+K QMA R R ++SDV ++
Sbjct: 69 QIRYLTQVATGQPHEGSSYSSRKDCQMALKRVDYTRLKLSDVART 113
>gi|45361611|ref|NP_989379.1| mediator of RNA polymerase II transcription subunit 11 [Xenopus
(Silurana) tropicalis]
gi|82186197|sp|Q6P255.1|MED11_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|40352942|gb|AAH64722.1| mediator of RNA polymerase II transcription subunit 11 [Xenopus
(Silurana) tropicalis]
Length = 118
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 63/88 (71%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER++ L++IE++I L +AG +LELSKEK + + + Q+ F ++ VE++L+ QI
Sbjct: 9 ERLRALEEIEREIAAILLNAGNVILELSKEKPNERVLDKQATQFTASVQRVESELSGQIR 68
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHR 89
YLTQV+TGQPHEGS Y+++K MA +R
Sbjct: 69 YLTQVATGQPHEGSSYSARKDGTMALNR 96
>gi|348541947|ref|XP_003458448.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Oreochromis niloticus]
Length = 117
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 62/89 (69%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+ +EK+I LQ AG +LELSK+K + + Q F ++S VE +L+ QI
Sbjct: 4 DRLRALEDVEKEIAMVLQCAGNIVLELSKDKHNASFLDRQLIQFQNSVSRVENELSAQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|225715834|gb|ACO13763.1| Mediator of RNA polymerase II transcription subunit 11 [Esox
lucius]
Length = 114
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R++ L+++E I T L AG +LELSK+K + + Q F +++ VET+L+ QI
Sbjct: 4 DRLRALEEVENQIATILLCAGNIVLELSKDKHNASFLDRQLSQFTGSVNRVETELSSQIR 63
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRS 90
YLTQV+TGQPHEGS Y+++K QMA +R+
Sbjct: 64 YLTQVATGQPHEGSTYSARKDCQMALNRA 92
>gi|432099594|gb|ELK28735.1| Mediator of RNA polymerase II transcription subunit 11 [Myotis
davidii]
Length = 118
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
R++ L+ E++I LQ+ G +LELSKEK + + + F ++ HVE +L+ QI Y
Sbjct: 11 RLRALEDSEREICAILQNVGTLILELSKEKPNERLLHRHAAAFRASVQHVEAELSAQICY 70
Query: 63 LTQVSTGQPHEGSGYASQKVLQMAWHRS--ARQQISDVIQS 101
LTQV+T QPHEGS Y+S K QMA R AR ++SDV ++
Sbjct: 71 LTQVATRQPHEGSSYSSNKDCQMALQRVDYARLKLSDVART 111
>gi|444732512|gb|ELW72803.1| 60S ribosomal protein L9 [Tupaia chinensis]
Length = 179
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 5 QVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLT 64
+ L+ E++I LQ+AG +LELSKEK++ + + Q+ F ++ HVE +L+ QI YLT
Sbjct: 96 RALEDTEREIGAILQNAGAVILELSKEKTNERLLDWQAAAFTASVQHVEAELSVQIRYLT 155
Query: 65 QVSTGQPHEGSGYASQKVLQMA 86
V+TGQPHEGS Y+S+K QMA
Sbjct: 156 PVATGQPHEGSSYSSRKDCQMA 177
>gi|358336329|dbj|GAA54870.1| mediator of RNA polymerase II transcription subunit 11
[Clonorchis sinensis]
Length = 115
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 53/76 (69%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
R+ LD++E+ I+ +Q AG AL ELSK++ ++KQ E+ +HNF L VET++ I+Y
Sbjct: 17 RLSRLDEVERKIMLIMQHAGNALDELSKDRPTVKQVENHTHNFRVVLKEVETEMNAHISY 76
Query: 63 LTQVSTGQPHEGSGYA 78
L Q+S G P+EG+ YA
Sbjct: 77 LNQISAGLPYEGTTYA 92
>gi|339242079|ref|XP_003376965.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
gi|339242123|ref|XP_003376987.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
gi|339242131|ref|XP_003376991.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
gi|316974262|gb|EFV57764.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
gi|316974268|gb|EFV57768.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
gi|316974294|gb|EFV57790.1| mediator of RNA polymerase II transcription subunit 11 [Trichinella
spiralis]
Length = 128
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
ER+ LD+ E++I+ +Q AGQ L E+SK+K++ +QAE+Q+ FL+ L+ E + EQ+N
Sbjct: 19 ERLSRLDEAERNIVQMMQCAGQCLAEVSKDKTASRQAENQAIEFLRKLALAEKMIDEQLN 78
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRSA--RQQI 95
YL V G HEGS Y+ + MA + A R QI
Sbjct: 79 YLGDVGVGAAHEGSSYSQLRFKLMAEEKVAWLRDQI 114
>gi|226466664|emb|CAX69467.1| Mediator complex subunit 11 [Schistosoma japonicum]
Length = 115
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
R+ LD++E+ + +Q AG AL ELSK+K +KQ ES +HNF + VET++ INY
Sbjct: 17 RLSKLDEVERKVSLIMQHAGSALEELSKDKPMVKQVESCTHNFRTVIKEVETEMNSHINY 76
Query: 63 LTQVSTGQPHEGSGY 77
L+Q+S G P+EG Y
Sbjct: 77 LSQISAGLPYEGCTY 91
>gi|256071716|ref|XP_002572185.1| hypothetical protein [Schistosoma mansoni]
gi|350646070|emb|CCD59247.1| hypothetical protein Smp_006980 [Schistosoma mansoni]
Length = 115
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
R+ LD++E+ I +Q AG AL ELSK+K ++KQ ES +HNF + VET++ INY
Sbjct: 17 RLNKLDEVERKISLIIQHAGSALEELSKDKPTVKQVESCTHNFRTVIKEVETEMNSHINY 76
Query: 63 LTQVSTGQPHEGSGY 77
L+ +S G P+EG Y
Sbjct: 77 LSHISAGLPYEGCTY 91
>gi|198428760|ref|XP_002127165.1| PREDICTED: similar to mediator of RNA polymerase II transcription,
subunit 11 homolog [Ciona intestinalis]
Length = 122
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
RI+ L+ IEK I T +QSAG ELSKEK + + E S F ++L VET++ QI+Y
Sbjct: 14 RIKKLEDIEKKITTAIQSAGLTFQELSKEKPTDRLIEKHSSTFTQSLDEVETEMASQISY 73
Query: 63 LTQVSTGQPHEGSGYASQKVLQMA----WHRSARQQISDVIQS 101
L+QV+T Q HEGS YA++ Q + H S Q+ D++Q+
Sbjct: 74 LSQVATNQQHEGSSYAARNKAQQSKEVISHLST--QVGDMLQT 114
>gi|221114612|ref|XP_002164790.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Hydra magnipapillata]
Length = 112
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+R+Q L++IE+D++ ++SAGQ+LLELSKE+ S S++ FLK L VE L+EQI+
Sbjct: 8 DRLQQLEEIERDLVAVIESAGQSLLELSKEQPSEDYIISRTTEFLKGLEAVEKNLSEQIS 67
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMAWHRSA 91
YL+ +T HE Y +K Q+ +A
Sbjct: 68 YLSNATTSHQHEAGIYGEEKKFQLVCEATA 97
>gi|313226321|emb|CBY21465.1| unnamed protein product [Oikopleura dioica]
Length = 133
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
+++ LDQIEK +++ +++ GQ + EL EK S K A + F+K + VE LT QI+Y
Sbjct: 15 KLKALDQIEKQLVSAIKNCGQVIGELGNEKISEKNAVKMTDKFIKEIDEVEGALTNQIHY 74
Query: 63 LTQVSTGQPHEGSGYASQKVL-QMAW-HRSARQQISDVIQ-SEADYFGV 108
L+QV+ HEGS Y QK + QMA H SA +I +++ + D F V
Sbjct: 75 LSQVTCSTTHEGSVYGQQKEMEQMATAHGSANLRIKKLMEITHPDKFPV 123
>gi|256068373|ref|XP_002570782.1| hypothetical protein [Schistosoma mansoni]
Length = 115
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
R+ LD++E+ I ++ AG AL ELSK++ ++KQ ES +HNF + V+ ++T INY
Sbjct: 17 RLNNLDEVERKISLVIEHAGSALEELSKDRPTVKQVESCTHNFRTVIMEVDMEVTSHINY 76
Query: 63 LTQVSTGQPHEGSGY 77
L+ +S G P+EG Y
Sbjct: 77 LSHISAGLPYEGCTY 91
>gi|313241297|emb|CBY33574.1| unnamed protein product [Oikopleura dioica]
Length = 133
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
+++ LDQIEK +++ +++ GQ + EL EK S K A + F+K + VE LT QI+Y
Sbjct: 15 KLKALDQIEKQLVSAIKNCGQVIGELGNEKISEKNAVKMTDKFIKEIDEVEGALTNQIHY 74
Query: 63 LTQVSTGQPHEGSGYASQKVL-QMAW-HRSARQQISDVIQ-SEADYFGV 108
L+QV+ HEGS Y QK + QMA H SA +I +++ + D + V
Sbjct: 75 LSQVTCSTTHEGSVYGQQKEMEQMATAHGSANLRIKKLMEITHPDKYPV 123
>gi|340368483|ref|XP_003382781.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Amphimedon queenslandica]
Length = 104
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQI 60
+ERI+ L +IE++I L A A+ ELSK + + E ++ +FLK+L +E L+EQI
Sbjct: 6 VERIEKLQKIEQEIGMLLSHAADAIGELSKPNPAQEMVEYKTKDFLKSLETIEQDLSEQI 65
Query: 61 NYLTQVSTGQPHEGSGYASQKVLQM 85
YL++VST HEGS Y ++K ++
Sbjct: 66 VYLSRVSTTHTHEGSNYGAEKDFEL 90
>gi|324507800|gb|ADY43299.1| Mediator of RNA polymerase II transcription subunit 11 [Ascaris
suum]
Length = 133
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 1 MERIQVLDQIEKDIITCLQSAGQALLELSKEKS-SLKQAESQSHNFLKTLSHVETKLTEQ 59
+ R+ + +I++ I ++ A + ELSKEK S + E S F +TL+ +E++L+ Q
Sbjct: 18 LRRLSAISEIDQRIADLMKHAQTCIAELSKEKQISKSKMEEASSAFKRTLNAIESELSAQ 77
Query: 60 INYLTQVSTGQPHEGSGYASQKVLQMA 86
+ YL+ V G PH+GS +ASQ+ + +A
Sbjct: 78 MQYLSHVCVGTPHQGSTFASQQNVTLA 104
>gi|312067192|ref|XP_003136627.1| hypothetical protein LOAG_01039 [Loa loa]
gi|307768215|gb|EFO27449.1| hypothetical protein LOAG_01039 [Loa loa]
Length = 128
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKS-SLKQAESQSHNFLKTLSHVETKLTEQIN 61
R++ + +E+ I ++ A + ELSKEK S + E S F K L+ +E+ L Q+
Sbjct: 15 RLKAIGDVEQKIAELIKHAQTCVNELSKEKQISKSKMEEASSAFKKCLNSIESDLNAQMQ 74
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMA 86
YL+ V G PH+GS +ASQ+ + +A
Sbjct: 75 YLSHVCVGTPHQGSTFASQQNIALA 99
>gi|345316790|ref|XP_001514751.2| PREDICTED: beta-arrestin-1-like, partial [Ornithorhynchus anatinus]
Length = 261
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 21 AGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVSTGQPHEGSGYASQ 80
+G +LELSKEK++ + + Q+ F ++ VE +L+ QI YLTQVS P G+G+ ++
Sbjct: 190 SGNVILELSKEKANERFLDRQAAAFTSSVQRVEAELSGQIRYLTQVSARDPGAGAGWCTR 249
Query: 81 KVLQMAWHRSARQQIS 96
+AW +AR++ S
Sbjct: 250 H--PVAW--TAREEWS 261
>gi|402592755|gb|EJW86682.1| hypothetical protein WUBG_02408 [Wuchereria bancrofti]
Length = 128
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKS-SLKQAESQSHNFLKTLSHVETKLTEQIN 61
R++ + +E+ I ++ A + ELSKEK S + E S F K L+ VE+ L+ Q+
Sbjct: 15 RLKAIGDVEQKIAELIRHAQTCINELSKEKQISKSKMEEASSAFKKCLNSVESDLSAQMQ 74
Query: 62 YLTQVSTGQPHEGSGYASQKVLQMA 86
YL+ V G H+GS +ASQ+ + +A
Sbjct: 75 YLSHVCVGTAHQGSTFASQQNIALA 99
>gi|170591676|ref|XP_001900596.1| Mediator protein 11 [Brugia malayi]
gi|158592208|gb|EDP30810.1| Mediator protein 11, putative [Brugia malayi]
Length = 130
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKS---SLKQAESQSHNFLKTLSHVETKLTEQ 59
R++ + +E+ I ++ A + ELSKEK S + E S F K L+ +E+ L+ Q
Sbjct: 15 RLKAIGDVEQKIAELIRHAQTCINELSKEKQASISKSKMEEASSAFKKCLNSIESDLSAQ 74
Query: 60 INYLTQVSTGQPHEGSGYASQKVLQMA 86
+ YL+ V G H+GS +ASQ+ + +A
Sbjct: 75 MQYLSHVCVGTAHQGSTFASQQNIALA 101
>gi|7506731|pir||T16757 hypothetical protein R144.3 - Caenorhabditis elegans
Length = 492
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLK-QAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK I ++ A + + +L KEK K + E ++NF K ++ VE +L+ Q+
Sbjct: 12 DRIQAIVTTEKSIDEMMKCAREIIQDLGKEKQIGKNKMEDNANNFKKLITQVENELSAQM 71
Query: 61 NYLTQVSTGQPHEGSGYA 78
YL+ V G H+GS +
Sbjct: 72 QYLSHVCVGSSHQGSTFG 89
>gi|17554678|ref|NP_498066.1| Protein MDT-11 [Caenorhabditis elegans]
gi|75021352|sp|Q9BI74.1|MED11_CAEEL RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|373219100|emb|CCD65876.1| Protein MDT-11 [Caenorhabditis elegans]
Length = 188
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLK-QAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK I ++ A + + +L KEK K + E ++NF K ++ VE +L+ Q+
Sbjct: 12 DRIQAIVTTEKSIDEMMKCAREIIQDLGKEKQIGKNKMEDNANNFKKLITQVENELSAQM 71
Query: 61 NYLTQVSTGQPHEGSGYA 78
YL+ V G H+GS +
Sbjct: 72 QYLSHVCVGSSHQGSTFG 89
>gi|158564336|sp|Q612X6.2|MED11_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
Length = 193
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKS-SLKQAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK+I ++ A + + +L KEK S + + +++F K ++ VE +L+ Q+
Sbjct: 12 DRIQAIVATEKNIDDMMKCAREIMQDLGKEKQISKNKMDDNANSFKKLITQVENELSAQM 71
Query: 61 NYLTQVSTGQPHEGSGYA 78
YL+ V G H+GS +
Sbjct: 72 QYLSHVCVGSSHQGSTFG 89
>gi|195999320|ref|XP_002109528.1| hypothetical protein TRIADDRAFT_53652 [Trichoplax adhaerens]
gi|190587652|gb|EDV27694.1| hypothetical protein TRIADDRAFT_53652 [Trichoplax adhaerens]
Length = 128
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 3 RIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINY 62
RI LD+ K ++ ++ A Q L ELS + S + +S + F L +E +LT+ IN+
Sbjct: 9 RIDELDKTRKKVLNVVEIADQILKELSNDHPSTQSVKSSTTTFASLLESIERELTQHINH 68
Query: 63 LTQVSTGQPHEGSGYASQKVLQMAWHR 89
L V+ Q E Y +K ++A R
Sbjct: 69 LLSVTKEQQQEQVTYTQEKDCELALMR 95
>gi|268573746|ref|XP_002641850.1| C. briggsae CBR-MDT-11 protein [Caenorhabditis briggsae]
Length = 259
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKS-SLKQAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK+I ++ A + + +L KEK S + + +++F K ++ VE +L+ Q+
Sbjct: 78 DRIQAIVATEKNIDDMMKCAREIMQDLGKEKQISKNKMDDNANSFKKLITQVENELSAQM 137
Query: 61 NYLTQVSTGQPHEGSGYA 78
YL+ V G H+GS +
Sbjct: 138 QYLSHVCVGSSHQGSTFG 155
>gi|308502151|ref|XP_003113260.1| CRE-MDT-11 protein [Caenorhabditis remanei]
gi|308265561|gb|EFP09514.1| CRE-MDT-11 protein [Caenorhabditis remanei]
Length = 212
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLK-QAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK I ++ A + + +L KEK K + E ++ F K ++ VE +L+ Q+
Sbjct: 12 DRIQTIVNTEKSIDEMMKCAREIIQDLGKEKQIGKNKMEENANTFKKLITQVENELSSQM 71
Query: 61 NYLTQVSTGQPHEGSGYA 78
YL+ V G H+GS +
Sbjct: 72 QYLSHVCVGSSHQGSTFG 89
>gi|341896249|gb|EGT52184.1| CBN-MDT-11 protein [Caenorhabditis brenneri]
Length = 198
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLK-QAESQSHNFLKTLSHVETKLTEQI 60
+RIQ + EK I ++ A + + +L KEK K + E ++ F K ++ VE +L+ Q+
Sbjct: 12 DRIQAIVSTEKSIDDMMKCAREIIQDLQKEKQIGKNKMEDNANTFKKLITQVENELSAQM 71
Query: 61 NYLTQVSTGQPHEGSGYAS 79
YL+ V G H+GS + +
Sbjct: 72 QYLSHVCVGSAHQGSSFGA 90
>gi|156051960|ref|XP_001591941.1| hypothetical protein SS1G_07387 [Sclerotinia sclerotiorum 1980]
gi|154705165|gb|EDO04904.1| hypothetical protein SS1G_07387 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 189
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQAL--LELSKEKSSLKQA-------ESQSHNFLKTLSHV 52
ERIQ L++I+K I+ +Q+AGQ L L SKE + + E+ S+ +LKTL V
Sbjct: 18 ERIQQLNEIDKSILQLVQTAGQTLKILTASKEPGEAQSSQEKREAFENASNAYLKTLQSV 77
Query: 53 ETKLTEQI 60
+ +L QI
Sbjct: 78 DVRLRRQI 85
>gi|154309680|ref|XP_001554173.1| hypothetical protein BC1G_07310 [Botryotinia fuckeliana B05.10]
gi|347827151|emb|CCD42848.1| hypothetical protein [Botryotinia fuckeliana]
Length = 192
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLEL--------SKEKSSLKQA-ESQSHNFLKTLSHV 52
ERIQ L++I+K I+ +Q+AGQ L L S+ +QA E S+++LKTL V
Sbjct: 20 ERIQQLNEIDKSILQLVQTAGQTLKILTAAQEPGESQSPQEKRQAFEDASNSYLKTLQSV 79
Query: 53 ETKLTEQI 60
+ +L QI
Sbjct: 80 DVRLRRQI 87
>gi|410611945|ref|ZP_11323033.1| sigma-70, region 4 family [Glaciecola psychrophila 170]
gi|410168561|dbj|GAC36922.1| sigma-70, region 4 family [Glaciecola psychrophila 170]
Length = 297
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 18 LQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQ-INYLTQVSTGQPHEGSG 76
L S GQ L +SK L A Q+HNFL T+ H + L+EQ + ++ + G GS
Sbjct: 132 LDSIGQTLFSVSK-TGQLMWATPQTHNFLSTIPHADDWLSEQLLPFVADIMRGPVKNGST 190
Query: 77 Y 77
+
Sbjct: 191 F 191
>gi|445407958|ref|ZP_21432464.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-57]
gi|444780858|gb|ELX04784.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-57]
Length = 281
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + YL ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQYLEGLNT 130
>gi|375136581|ref|YP_004997231.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter calcoaceticus
PHEA-2]
gi|325124026|gb|ADY83549.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter calcoaceticus
PHEA-2]
Length = 281
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK TE + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTTEYVQHLEGLNT 130
>gi|345564686|gb|EGX47646.1| hypothetical protein AOL_s00083g154 [Arthrobotrys oligospora ATCC
24927]
Length = 166
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQIN 61
+RI+ L+QI+K+I + L +A A+ LS K S +QS + ++ + + L QI
Sbjct: 24 DRIKQLNQIDKEITSLLTTASAAITTLSSPKPSQSTFRTQSAQYHTSVHSIISALKRQIY 83
Query: 62 YLTQ------------VSTGQPHEGSGYAS 79
L Q + P GSG AS
Sbjct: 84 ALEQADIPLPAVLTSPAGSAPPAAGSGSAS 113
>gi|320033353|gb|EFW15301.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 175
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 2 ERIQVLDQIEKDIITCLQSAG---QALLELSKEKSSLKQAESQSHN-------------- 44
+RI+ L++I++D L++AG QAL + K + S S
Sbjct: 14 DRIEQLNEIDRDATKLLRAAGLAVQALTNIPLSNGGTKDSHSPSSKSALEAHQEAFKAAS 73
Query: 45 --FLKTLSHVETKLTEQINYLTQVS------TGQPHEGSGYASQKVLQMAW 87
+ LS ++ +L Q+ L + S T +P EGS A+ L+ +W
Sbjct: 74 SQYFALLSSIDVRLRRQVYALEEASIIRPETTTKPAEGSATAAFNPLETSW 124
>gi|320164702|gb|EFW41601.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 115
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 7 LDQIEKDIITCLQSAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQV 66
L+ IEKDI+ +++A A+ L+ E + E T+ V+T L + + Q+
Sbjct: 13 LEAIEKDILASMRAASSAIAHLAAETADADGFERSVAEVFSTIKAVQTSLPPHFHEIAQI 72
Query: 67 STGQPHEGSGYASQKVLQMAWHRSA 91
P E S Y ++ ++A R A
Sbjct: 73 QR-LPFENSSYGAKLDCELATQRHA 96
>gi|221053077|ref|XP_002257913.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193807745|emb|CAQ38450.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 3380
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 27 ELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYL 63
++ KEK S Q E+Q+H FL + + +KL+++IN++
Sbjct: 3008 DIHKEKESTSQTENQAHFFLDAMLQIISKLSDRINFI 3044
>gi|119189441|ref|XP_001245327.1| hypothetical protein CIMG_04768 [Coccidioides immitis RS]
gi|392868232|gb|EAS33983.2| hypothetical protein CIMG_04768 [Coccidioides immitis RS]
Length = 175
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 2 ERIQVLDQIEKDIITCLQSAG---QALLELSKEKSSLKQAESQSHN-------------- 44
+RI+ L++I++D L++AG QAL + K + S S
Sbjct: 14 DRIEQLNEIDRDATKLLRAAGFAVQALTNIPLSNGGTKDSHSPSSKSALEAHQEAFKAAS 73
Query: 45 --FLKTLSHVETKLTEQINYLTQVSTGQPH------EGSGYASQKVLQMAW 87
+ LS ++ +L Q+ L + S +P EGSG A+ L+ +W
Sbjct: 74 SQYFALLSSIDVRLRRQVYALEEASIIRPETTTKTAEGSGTAAFNPLETSW 124
>gi|194016768|ref|ZP_03055381.1| response regulator aspartate phosphatase B (Stage 0sporulation
protein P) [Bacillus pumilus ATCC 7061]
gi|194011374|gb|EDW20943.1| response regulator aspartate phosphatase B (Stage 0sporulation
protein P) [Bacillus pumilus ATCC 7061]
Length = 420
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 44 NFLKTLSHVETKLTEQINYLTQVSTGQ-PHEGSGYASQKVLQMAWHRSARQQ---ISDVI 99
N L+T+ H +TKLT+ + Y TG E Y S +A++RSA ++ ISD I
Sbjct: 81 NLLETIEHSQTKLTDMLEYYVHFFTGMFEFEQQNYLS----AIAYYRSAEKKLNLISDDI 136
Query: 100 QSEADYF 106
+ YF
Sbjct: 137 ERAEFYF 143
>gi|157692863|ref|YP_001487325.1| aspartate phosphatase response regulator [Bacillus pumilus
SAFR-032]
gi|157681621|gb|ABV62765.1| aspartate phosphatase response regulator [Bacillus pumilus
SAFR-032]
Length = 420
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 44 NFLKTLSHVETKLTEQINYLTQVSTGQ-PHEGSGYASQKVLQMAWHRSARQQ---ISDVI 99
N L+T+ H +TKLT+ + Y TG E Y S +A++RSA ++ ISD I
Sbjct: 81 NLLETIEHSQTKLTDMLEYYVHFFTGMFEFEQQNYLS----AIAYYRSAEKKLNLISDDI 136
Query: 100 QSEADYF 106
+ YF
Sbjct: 137 ERAEFYF 143
>gi|302811384|ref|XP_002987381.1| hypothetical protein SELMODRAFT_126111 [Selaginella
moellendorffii]
gi|300144787|gb|EFJ11468.1| hypothetical protein SELMODRAFT_126111 [Selaginella
moellendorffii]
Length = 119
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 7 LDQIEKDIITCLQSAGQALLELSKEKSS-LKQAESQSHNFLKTLSHVETKLTEQINYLTQ 65
L +E+ I+ ++ AG + EL+ ++ A +Q H F+K++ ++T L E+I + +
Sbjct: 15 LAHVERKIVQAVEFAGSVMEELANAGGPRMEFATTQCHEFMKSMKDIQTVLHEEIKSMCE 74
Query: 66 VSTGQPHEGSGY 77
+P+E Y
Sbjct: 75 Y---RPYENCDY 83
>gi|238483473|ref|XP_002372975.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|317139886|ref|XP_003189212.1| hypothetical protein AOR_1_1414174 [Aspergillus oryzae RIB40]
gi|220701025|gb|EED57363.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 169
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 2 ERIQVLDQIEKDIITCLQSAGQALLELSKEKSS--------------LKQAESQSHNFLK 47
+RI+ L++++KD+ + SAG A+ L+ +SS K+A SQ +
Sbjct: 18 DRIRQLNEVDKDVARLIHSAGLAIQALTNARSSDSAGDNSLDSHKARFKEATSQ---YFA 74
Query: 48 TLSHVETKLTEQINYLTQVSTGQPHEGS 75
LS ++ +L Q+ L + S P S
Sbjct: 75 LLSSIDVRLRRQVYALEEASILAPDSSS 102
>gi|427425808|ref|ZP_18915882.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-136]
gi|425697334|gb|EKU67016.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-136]
Length = 281
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVKHLEGLNT 130
>gi|424741209|ref|ZP_18169570.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-141]
gi|422945142|gb|EKU40113.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-141]
Length = 281
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|417553976|ref|ZP_12205045.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-81]
gi|421453752|ref|ZP_15903104.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-123]
gi|421633144|ref|ZP_16073786.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-13]
gi|421674914|ref|ZP_16114841.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC065]
gi|421690054|ref|ZP_16129726.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-116]
gi|421804850|ref|ZP_16240748.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-A-694]
gi|400213620|gb|EJO44574.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-123]
gi|400390393|gb|EJP57440.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-81]
gi|404565017|gb|EKA70191.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-116]
gi|408707374|gb|EKL52660.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-13]
gi|410383538|gb|EKP36069.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC065]
gi|410410416|gb|EKP62323.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-A-694]
Length = 281
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLTGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|421201998|ref|ZP_15659152.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
AC12]
gi|421534272|ref|ZP_15980548.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
AC30]
gi|398328606|gb|EJN44730.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
AC12]
gi|409987896|gb|EKO44073.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
AC30]
Length = 281
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|293611258|ref|ZP_06693556.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826509|gb|EFF84876.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 281
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|417562849|ref|ZP_12213728.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC137]
gi|421199908|ref|ZP_15657069.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC109]
gi|395525431|gb|EJG13520.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC137]
gi|395564905|gb|EJG26556.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC109]
Length = 281
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLTGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|260552991|ref|ZP_05825906.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter sp. RUH2624]
gi|403673920|ref|ZP_10936198.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter sp. NCTC
10304]
gi|260405233|gb|EEW98730.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter sp. RUH2624]
Length = 281
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLTGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|169797747|ref|YP_001715540.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii AYE]
gi|213155454|ref|YP_002317500.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
AB0057]
gi|215485097|ref|YP_002327338.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii AB307-0294]
gi|301347143|ref|ZP_07227884.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB056]
gi|301510111|ref|ZP_07235348.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB058]
gi|301595856|ref|ZP_07240864.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB059]
gi|421642697|ref|ZP_16083211.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-235]
gi|421645786|ref|ZP_16086242.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-251]
gi|421660772|ref|ZP_16100957.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-83]
gi|421697718|ref|ZP_16137264.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-58]
gi|169150674|emb|CAM88583.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii AYE]
gi|213054614|gb|ACJ39516.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
AB0057]
gi|213986059|gb|ACJ56358.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii AB307-0294]
gi|404573315|gb|EKA78353.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-58]
gi|408512479|gb|EKK14121.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-235]
gi|408518116|gb|EKK19650.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-251]
gi|408703695|gb|EKL49081.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-83]
Length = 281
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|332852854|ref|ZP_08434436.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6013150]
gi|332866701|ref|ZP_08437163.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6013113]
gi|332873557|ref|ZP_08441506.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6014059]
gi|417548162|ref|ZP_12199243.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-18]
gi|417577279|ref|ZP_12228124.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-17]
gi|421622495|ref|ZP_16063396.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC074]
gi|421631286|ref|ZP_16071972.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC180]
gi|421655749|ref|ZP_16096065.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-72]
gi|332728968|gb|EGJ60319.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6013150]
gi|332734470|gb|EGJ65585.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6013113]
gi|332738254|gb|EGJ69132.1| nicotinate-nucleotide diphosphorylase [Acinetobacter baumannii
6014059]
gi|395570500|gb|EJG31162.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-17]
gi|400388461|gb|EJP51533.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-18]
gi|408507270|gb|EKK08967.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-72]
gi|408694746|gb|EKL40309.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC180]
gi|408694847|gb|EKL40407.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC074]
Length = 281
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|421808977|ref|ZP_16244818.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC035]
gi|410415207|gb|EKP66998.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC035]
Length = 281
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLTGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|169632073|ref|YP_001705809.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii SDF]
gi|184156386|ref|YP_001844725.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ACICU]
gi|239503773|ref|ZP_04663083.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB900]
gi|260557698|ref|ZP_05829912.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|384130037|ref|YP_005512649.1| nadC [Acinetobacter baumannii 1656-2]
gi|384141315|ref|YP_005524025.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
MDR-ZJ06]
gi|385235624|ref|YP_005796963.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
TCDC-AB0715]
gi|416146500|ref|ZP_11601204.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB210]
gi|417571409|ref|ZP_12222266.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC189]
gi|417876059|ref|ZP_12520854.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH2]
gi|417877182|ref|ZP_12521910.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH3]
gi|421626085|ref|ZP_16066915.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC098]
gi|421650672|ref|ZP_16091046.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC0162]
gi|421666578|ref|ZP_16106668.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC087]
gi|421679497|ref|ZP_16119367.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC111]
gi|421689071|ref|ZP_16128757.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-143]
gi|421787079|ref|ZP_16223456.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-82]
gi|424054189|ref|ZP_17791719.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab11111]
gi|425749569|ref|ZP_18867541.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-348]
gi|425753545|ref|ZP_18871428.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-113]
gi|445471402|ref|ZP_21452099.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC338]
gi|445491646|ref|ZP_21459877.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii AA-014]
gi|169150865|emb|CAO99469.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii]
gi|183207980|gb|ACC55378.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
ACICU]
gi|193075959|gb|ABO10539.2| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ATCC 17978]
gi|260408871|gb|EEX02175.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii ATCC 19606 = CIP 70.34]
gi|322506257|gb|ADX01711.1| nadC [Acinetobacter baumannii 1656-2]
gi|323516132|gb|ADX90513.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
TCDC-AB0715]
gi|333366214|gb|EGK48228.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
AB210]
gi|342224205|gb|EGT89254.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH2]
gi|342236292|gb|EGU00828.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH3]
gi|347591808|gb|AEP04529.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
MDR-ZJ06]
gi|395551857|gb|EJG17866.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC189]
gi|404558963|gb|EKA64236.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii IS-143]
gi|404666744|gb|EKB34675.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab11111]
gi|408509919|gb|EKK11586.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC0162]
gi|408696159|gb|EKL41711.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC098]
gi|410387612|gb|EKP40057.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC087]
gi|410391033|gb|EKP43411.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC111]
gi|410409824|gb|EKP61747.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-82]
gi|425488327|gb|EKU54664.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-348]
gi|425497868|gb|EKU63958.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-113]
gi|444764184|gb|ELW88507.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii AA-014]
gi|444771384|gb|ELW95514.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC338]
gi|452950036|gb|EME55501.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
MSP4-16]
Length = 281
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|417575317|ref|ZP_12226170.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Canada BC-5]
gi|421663325|ref|ZP_16103473.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC110]
gi|421694194|ref|ZP_16133822.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-692]
gi|421799098|ref|ZP_16235103.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Canada BC1]
gi|400206050|gb|EJO37030.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Canada BC-5]
gi|404568718|gb|EKA73814.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-692]
gi|408713430|gb|EKL58597.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC110]
gi|410410808|gb|EKP62699.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Canada BC1]
Length = 281
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|417566499|ref|ZP_12217371.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC143]
gi|424061611|ref|ZP_17799100.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab33333]
gi|445450072|ref|ZP_21444407.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-A-92]
gi|395552171|gb|EJG18179.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC143]
gi|404666488|gb|EKB34435.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab33333]
gi|444756055|gb|ELW80614.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-A-92]
Length = 281
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|421701670|ref|ZP_16141160.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
ZWS1122]
gi|421705482|ref|ZP_16144909.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
ZWS1219]
gi|407195675|gb|EKE66803.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
ZWS1219]
gi|407195979|gb|EKE67098.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Acinetobacter baumannii
ZWS1122]
Length = 281
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|387125730|ref|YP_006291612.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
MDR-TJ]
gi|385880222|gb|AFI97317.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
MDR-TJ]
Length = 281
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|421798353|ref|ZP_16234377.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-21]
gi|410394446|gb|EKP46775.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-21]
Length = 281
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|417544549|ref|ZP_12195635.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC032]
gi|417870031|ref|ZP_12515004.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH1]
gi|417882405|ref|ZP_12526703.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH4]
gi|421671954|ref|ZP_16111921.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC099]
gi|421793825|ref|ZP_16229941.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-2]
gi|424065058|ref|ZP_17802542.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab44444]
gi|445476486|ref|ZP_21453860.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-78]
gi|342228779|gb|EGT93657.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH1]
gi|342237905|gb|EGU02356.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ABNIH4]
gi|400382437|gb|EJP41115.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC032]
gi|404672508|gb|EKB40323.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Ab44444]
gi|410380888|gb|EKP33464.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC099]
gi|410396066|gb|EKP48350.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-2]
gi|444777699|gb|ELX01723.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii Naval-78]
Length = 281
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|126640157|ref|YP_001083141.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
ATCC 17978]
Length = 250
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 51 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 99
>gi|445462300|ref|ZP_21449086.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC047]
gi|444770555|gb|ELW94708.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC047]
Length = 281
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLTGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|424057448|ref|ZP_17794965.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter nosocomialis Ab22222]
gi|425740800|ref|ZP_18858966.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-487]
gi|445433028|ref|ZP_21439571.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC021]
gi|407440981|gb|EKF47498.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter nosocomialis Ab22222]
gi|425494408|gb|EKU60612.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii WC-487]
gi|444757945|gb|ELW82453.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Acinetobacter baumannii OIFC021]
Length = 281
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
>gi|407930960|ref|YP_006846603.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
TYTH-1]
gi|407899541|gb|AFU36372.1| nicotinate-nucleotide pyrophosphorylase [Acinetobacter baumannii
TYTH-1]
Length = 281
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 20 SAGQALLELSKEKSSLKQAESQSHNFLKTLSHVETKLTEQINYLTQVST 68
+A +A L+L+ SL E + NF++TLS V TK E + +L ++T
Sbjct: 82 AANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAEYVQHLEGLNT 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.125 0.334
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,407,801,193
Number of Sequences: 23463169
Number of extensions: 42346391
Number of successful extensions: 141456
Number of sequences better than 100.0: 162
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 141309
Number of HSP's gapped (non-prelim): 164
length of query: 112
length of database: 8,064,228,071
effective HSP length: 80
effective length of query: 32
effective length of database: 6,187,174,551
effective search space: 197989585632
effective search space used: 197989585632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)