BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy9766
         (97 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3ZXB|A Chain A, Wild Type Single Insulin-Like Growth Factor Binding
          Domain Protein (Sibd-1) From Cupiennius Salei
 pdb|3ZXB|B Chain B, Wild Type Single Insulin-Like Growth Factor Binding
          Domain Protein (Sibd-1) From Cupiennius Salei
 pdb|3ZXB|C Chain C, Wild Type Single Insulin-Like Growth Factor Binding
          Domain Protein (Sibd-1) From Cupiennius Salei
 pdb|3ZXB|D Chain D, Wild Type Single Insulin-Like Growth Factor Binding
          Domain Protein (Sibd-1) From Cupiennius Salei
          Length = 78

 Score = 33.5 bits (75), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 19/38 (50%)

Query: 42 GTVWDPCGCCKVCARAENQPCGGPYGFFGSCAHDLECV 79
          GT  D C CC VC +     CGGP   FG CA    CV
Sbjct: 20 GTTKDACDCCPVCFQGPGGYCGGPEDVFGICADGFACV 57


>pdb|3ZXC|A Chain A, E69 Deletion Mutant Single Insulin-Like Growth Factor
          Binding Domain Protein (Sibd-1) From Cupiennius Salei
 pdb|3ZXC|B Chain B, E69 Deletion Mutant Single Insulin-Like Growth Factor
          Binding Domain Protein (Sibd-1) From Cupiennius Salei
          Length = 77

 Score = 33.5 bits (75), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 19/38 (50%)

Query: 42 GTVWDPCGCCKVCARAENQPCGGPYGFFGSCAHDLECV 79
          GT  D C CC VC +     CGGP   FG CA    CV
Sbjct: 20 GTTKDACDCCPVCFQGPGGYCGGPEDVFGICADGFACV 57


>pdb|3TJQ|A Chain A, N-Domain Of Htra1
          Length = 140

 Score = 29.3 bits (64), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 24 CNPAECETLTDDDCPDRAGTVWDPCGCCKVCARAENQPCGGPYGFFGSCAHDLECVV 80
          C PA C     + C    G   D CGCC+VC   E   CG      G C   L+CVV
Sbjct: 23 CEPARCPP-QPEHC--EGGRARDACGCCEVCGAPEGAACG---LQEGPCGEGLQCVV 73


>pdb|1E6V|A Chain A, Methyl-Coenzyme M Reductase From Methanopyrus Kandleri
 pdb|1E6V|D Chain D, Methyl-Coenzyme M Reductase From Methanopyrus Kandleri
          Length = 553

 Score = 27.3 bits (59), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 55  ARAENQPCGGPYGFFGSCAHDL 76
           AR EN+P G P+G    C   +
Sbjct: 275 ARGENEPGGVPFGVLADCVQTM 296


>pdb|3EDI|A Chain A, Crystal Structure Of Tolloid-Like Protease 1 (Tll-1)
          Protease Domain
          Length = 201

 Score = 25.4 bits (54), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 44 VWDPCGCCKVCARAENQPCGGPYG----FFGSCAHDLECVV 80
           + PCGCC    R  N P     G     FG   H+L  V+
Sbjct: 59 TYRPCGCCSYVGRRGNGPQAISIGKNCDKFGIVVHELGHVI 99


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.326    0.141    0.513 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,256,863
Number of Sequences: 62578
Number of extensions: 120955
Number of successful extensions: 238
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 226
Number of HSP's gapped (non-prelim): 18
length of query: 97
length of database: 14,973,337
effective HSP length: 63
effective length of query: 34
effective length of database: 11,030,923
effective search space: 375051382
effective search space used: 375051382
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)