RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9766
         (97 letters)



>d1wqjb1 g.3.9.1 (B:3-82) Insulin-like growth factor-binding
          protein 4 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 80

 Score = 34.4 bits (79), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 3/39 (7%)

Query: 41 AGTVWDPCGCCKVCARAENQPCGGPYGFFGSCAHDLECV 79
                 CGCC  CA     PCG    +   C   L C 
Sbjct: 23 ELVREPGCGCCATCALGLGMPCG---VYTPRCGSGLRCY 58


>d1e6ya1 a.89.1.1 (A:1284-1569) Alpha chain {Archaeon
          Methanosarcina barkeri [TaxId: 2208]}
          Length = 286

 Score = 24.7 bits (54), Expect = 2.5
 Identities = 6/18 (33%), Positives = 8/18 (44%)

Query: 55 ARAENQPCGGPYGFFGSC 72
          AR  N+P G  +G     
Sbjct: 3  ARGPNEPGGLSFGHLSDI 20


>d2bo9b1 d.17.1.5 (B:1-98) Latexin {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 98

 Score = 23.3 bits (50), Expect = 4.2
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 7/43 (16%)

Query: 55 ARAENQPCGGPYGFFGSCAHDLECVVTDVTNENSGGVCTQEIM 97
          A  E+ P  G         + L+  V ++  +     CT E++
Sbjct: 40 ASMEDIPGRG-------HKYRLKFAVEEIIQKQVKVNCTAEVL 75


>d1v7wa2 b.30.5.3 (A:1-270) Chitobiose phosphorylase ChbP {Vibrio
           proteolyticus [TaxId: 671]}
          Length = 270

 Score = 23.7 bits (51), Expect = 5.0
 Identities = 5/21 (23%), Positives = 9/21 (42%)

Query: 30  ETLTDDDCPDRAGTVWDPCGC 50
             +    C + A T ++ CG 
Sbjct: 227 LAVEQGRCSNSAQTCYNHCGS 247


>d1hbna1 a.89.1.1 (A:270-549) Alpha chain {Archaeon
          Methanobacterium thermoautotrophicum [TaxId: 145262]}
          Length = 280

 Score = 23.5 bits (51), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 55 ARAENQPCGGPYGFFGSC 72
          AR EN+P G P+G+    
Sbjct: 3  ARGENEPGGVPFGYLADI 20


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.141    0.513 

Gapped
Lambda     K      H
   0.267   0.0423    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 399,231
Number of extensions: 18324
Number of successful extensions: 84
Number of sequences better than 10.0: 1
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 31
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)