BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9768
(406 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sapiens GN=PCID2 PE=1 SV=2
Length = 399
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 275/399 (68%), Gaps = 6/399 (1%)
Query: 4 VERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVSAH 63
+ +YLQ+V + RD + SFK+P + Q + ++ LE P E+ +AH
Sbjct: 6 INQYLQQVYEAIDSRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAH 65
Query: 64 LKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK 123
L+C ++ ++F EAY Q+ IVQ F++ FQ KE+NW LPV+ V+L+LR+ +N D +
Sbjct: 66 LRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRVFANNADQQ 125
Query: 124 ALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVY 183
++ G S K D LE E+LM+CFR+C SD R DSKKWGML VNQLFK+Y
Sbjct: 126 L----VKKGKS--KVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIY 179
Query: 184 FRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQR 243
F+I+KLHL KPLIRAI+SS KD S +Q++TYKYYVGRKAMFDSD+K A EYL+FAF+
Sbjct: 180 FKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEH 239
Query: 244 CHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLSDAMT 303
CH+SS+KNKR+ILIYL+PVKMLLG MPT ELL KY L+Q +VT AV G + L +A+
Sbjct: 240 CHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALA 299
Query: 304 KHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHIDLED 363
KH+ FFI+CGI+LILEKLK+ITYRN + + K + L FL AL +++ + +D+++
Sbjct: 300 KHEAFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDE 359
Query: 364 THCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAI 402
C+L NLI+ G +KGYIS HQK+V+SK +PFP LS +
Sbjct: 360 VQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTV 398
>sp|Q5FWP8|PCID2_XENLA PCI domain-containing protein 2 OS=Xenopus laevis GN=pcid2 PE=2
SV=1
Length = 399
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 281/399 (70%), Gaps = 6/399 (1%)
Query: 4 VERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVSAH 63
+ +YLQ+V+ + +D + SFK+P + Q + ++ LE P E+ +AH
Sbjct: 6 INQYLQQVQEAIDSKDGFNCADLVSFKHPHVANARLQLLSPEEKCQQVLEPPYDEMFAAH 65
Query: 64 LKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK 123
L+C+ + ++F EAY Q+ +VQ F+K FQ KE+NW LP++ +++L+LR+ +N D +
Sbjct: 66 LRCINAASNHDFVEAYKYQTLVVQSFLKSFQAHKEENWALPIMYSITLDLRIFANNADQQ 125
Query: 124 ALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVY 183
+ G G D LE E+LM+CFR+C SD R + DSKKWGML VNQLFK+Y
Sbjct: 126 LVKKG--KGKVG----DMLEKAAEILMSCFRVCASDTRAAFEDSKKWGMLFLVNQLFKIY 179
Query: 184 FRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQR 243
F+ISKLHL KPLIRAI+SS +K++ +++Q++T+KYYVGRK+MFDSD+K A EYL+FAF+
Sbjct: 180 FKISKLHLCKPLIRAIDSSNFKEEYTMAQRVTFKYYVGRKSMFDSDFKKAEEYLSFAFEH 239
Query: 244 CHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLSDAMT 303
CH+SS+KNKR+ILIYL+PVKMLLG MPT LL KYDL+Q +VT AV G + L++A+T
Sbjct: 240 CHRSSQKNKRMILIYLLPVKMLLGHMPTIHLLKKYDLMQFAEVTKAVSEGNLLLLTEALT 299
Query: 304 KHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHIDLED 363
KH+TFFI+CGI+LILEKLK+I+YRN + + K + L FL AL ++E +D+++
Sbjct: 300 KHETFFIRCGIFLILEKLKIISYRNLFKKVYLLLKTHQLSLDAFLVALKFMEVGDVDIDE 359
Query: 364 THCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAI 402
C++ NLI+ G +KGYIS HQK+V+SK +PFP LS +
Sbjct: 360 VQCIIANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTV 398
>sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus musculus GN=Pcid2 PE=2 SV=1
Length = 399
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/399 (51%), Positives = 276/399 (69%), Gaps = 6/399 (1%)
Query: 4 VERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVSAH 63
+ +YLQ+V + RD + SFK+P + Q + ++ LE P E+ +AH
Sbjct: 6 INQYLQQVYEAIDTRDGASCAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAH 65
Query: 64 LKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK 123
L+C ++ ++F EAY Q+ IVQ F++ FQ KE+NW LPV+ V+L+LR+ +N D +
Sbjct: 66 LRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQ 125
Query: 124 ALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVY 183
++ G S K D LE E+LM+CFR+C SD R DSKKWGML VNQLFK+Y
Sbjct: 126 L----VKKGKS--KVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIY 179
Query: 184 FRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQR 243
F+I+KLHL KPLIRAI+SS KD S +Q+ITYKYYVGRKAMFDSD+K A EYL+FAF+
Sbjct: 180 FKINKLHLCKPLIRAIDSSNLKDDYSTAQRITYKYYVGRKAMFDSDFKQAEEYLSFAFEH 239
Query: 244 CHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLSDAMT 303
CH+SS+KNKR+ILIYL+PVKMLLG MPT ELL KY L+Q +VT AV G + L++A+
Sbjct: 240 CHRSSQKNKRMILIYLLPVKMLLGHMPTIELLRKYHLMQFSEVTKAVSEGNLLLLNEALA 299
Query: 304 KHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHIDLED 363
KH+TFFI+CGI+LILEKLK+ITYRN + + K + L FL AL ++ + +D+++
Sbjct: 300 KHETFFIRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMHVEDVDIDE 359
Query: 364 THCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAI 402
C+L NLI+ G +KGYIS HQK+V+SK +PFP LS +
Sbjct: 360 VQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTV 398
>sp|Q5U3P0|PCID2_DANRE PCI domain-containing protein 2 OS=Danio rerio GN=pcid2 PE=2 SV=1
Length = 399
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/400 (49%), Positives = 278/400 (69%), Gaps = 6/400 (1%)
Query: 4 VERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVSAH 63
+ +YLQ+V + RD + + SFK+P + Q + + ++ LE P E+V+AH
Sbjct: 6 LNQYLQQVLEAIDSRDGSFCAEMMSFKHPHVANPRLQLSSPEEKCQQLLEPPYDEMVAAH 65
Query: 64 LKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK 123
L+C ++ ++F EAY Q+ +VQ F+K FQ KE+NW LP++ V+L+LR+ +N +
Sbjct: 66 LRCTFAVSNHDFVEAYKCQTVVVQSFLKAFQAHKEENWALPIMFAVTLDLRIFANNAEQ- 124
Query: 124 ALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVY 183
+Q G K D LE E LM+CFR+C SDNR +DSKKWGML +NQLFK+Y
Sbjct: 125 ----HLQQKGKG-KVGDMLEKAAEQLMSCFRVCASDNRAGIDDSKKWGMLFLINQLFKIY 179
Query: 184 FRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQR 243
F+I+KLHL KPLIRAI+SS KD+ +++Q++TYKYYVGRKAMFDSD+K A E L+F+F
Sbjct: 180 FKINKLHLCKPLIRAIDSSNLKDEYTMAQRVTYKYYVGRKAMFDSDFKPAEECLSFSFTH 239
Query: 244 CHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLSDAMT 303
CH+S ++NKRLILIYL+PVKMLLG MPT +LL KYDL+Q DVT AV G + L+ A+
Sbjct: 240 CHRSCQRNKRLILIYLLPVKMLLGHMPTHQLLKKYDLMQFADVTRAVSEGNLLLLNAALV 299
Query: 304 KHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHIDLED 363
KH+TFFI+CGI+LILEKLK+ITYRN + + + + L FL +L + + +D+++
Sbjct: 300 KHETFFIRCGIFLILEKLKIITYRNLFKKVYHLLRTHQLPLAAFLVSLQMTKVEDVDIDE 359
Query: 364 THCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIA 403
C+L NLI+ G +KGYIS HQK+V+SK +PFP LS+I+
Sbjct: 360 VQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSSIS 399
>sp|Q2TBN6|PCID2_BOVIN PCI domain-containing protein 2 OS=Bos taurus GN=PCID2 PE=2 SV=1
Length = 408
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/411 (49%), Positives = 276/411 (67%), Gaps = 21/411 (5%)
Query: 4 VERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVSAH 63
+ +YLQ+V + RD L+ SFK+P + Q + ++ LE P E+ +AH
Sbjct: 6 INQYLQQVCEAIDTRDGASLAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAH 65
Query: 64 LKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK 123
L+C ++ ++F EAY Q+ IVQ F++ FQ KE+NW LPV+ V+L+LR+ +N D +
Sbjct: 66 LRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQ 125
Query: 124 ALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVY 183
++ G S K D LE E+LM CFR+C SD R DSKK GML VNQLFK+Y
Sbjct: 126 L----VKKGKS--KVGDMLEKAAELLMGCFRVCASDTRAGIEDSKKRGMLFLVNQLFKIY 179
Query: 184 FRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQR 243
F+I+KLHL KPLIRAI+SS KD S +Q++TY+YYVGRKAMFDSD+K A EYL+FAF+
Sbjct: 180 FKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEH 239
Query: 244 CHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLSDAMT 303
CH+SS+KNKR++LIYL+PVKMLLG MPT ELL KY L+Q +VT AV G + L++A+
Sbjct: 240 CHRSSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTRAVSEGNLLLLNEALA 299
Query: 304 KHQTFFIKCGIYLILEKLKMITYRNFYNIHKDIN------------KNSVVELQQFLQAL 351
H+TFFI+CGI+LILEKLK+ITYRN + K +N K + L FL AL
Sbjct: 300 AHETFFIRCGIFLILEKLKIITYRNLF---KKVNSLSSASSRYLLLKTHQLSLDAFLVAL 356
Query: 352 HYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAI 402
+++ + +D+ + C+L NLI+ G +KGYIS HQK+V+SK +PFP LS +
Sbjct: 357 KFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTV 407
>sp|Q9VTL1|PCID2_DROME PCI domain-containing protein 2 homolog OS=Drosophila melanogaster
GN=PCID2 PE=1 SV=2
Length = 395
Score = 346 bits (888), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/401 (42%), Positives = 253/401 (63%), Gaps = 11/401 (2%)
Query: 2 SAVERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFELVS 61
V YL V + D L+ S ++ ++ + + ++ R+L+ P+ E+VS
Sbjct: 3 GTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLKPPLDEVVS 62
Query: 62 AHLKCVQSI--QANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNK 119
AHLK + + + + EAY QS +++ QQ K++NW LP++ V L+LR
Sbjct: 63 AHLKVLYHLAQEPPGYMEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRY---- 118
Query: 120 VDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQL 179
LA + + G P LE + +M CFR+C +D R SE D+K+ GM+ VNQL
Sbjct: 119 -----LAQACEKHCQGFTPGHVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQL 173
Query: 180 FKVYFRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTF 239
FK+YFRI+KLHL KPLIRAI++ +KD L +QITYKY+VGR+AMFDS+Y+ A +YL++
Sbjct: 174 FKIYFRINKLHLCKPLIRAIDNCIFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSY 233
Query: 240 AFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKGGQINQLS 299
AF C NKRLILIYLVPVKMLLG++P++ LL +YDLL D+ +A+K G +N+
Sbjct: 234 AFSNCPDRFASNKRLILIYLVPVKMLLGYLPSKSLLQRYDLLLFLDLAMAMKAGNVNRFD 293
Query: 300 DAMTKHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHI 359
+ + + I+ GIYL++EKLK + YRN + I K+ +++ FL ALH+V +
Sbjct: 294 EIVRDQELVLIRSGIYLLVEKLKFLVYRNLFKKVFVIRKSHQLDMGDFLSALHFVGLTDV 353
Query: 360 DLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLS 400
L++THC++ NLI+DG++KGYIS AH K+V+SK +PFP +S
Sbjct: 354 SLDETHCIVANLIYDGKIKGYISHAHNKLVVSKQNPFPSVS 394
>sp|Q95QU0|PCID2_CAEEL PCI domain-containing protein 2 homolog OS=Caenorhabditis elegans
GN=C27F2.10 PE=3 SV=1
Length = 413
Score = 268 bits (684), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 218/360 (60%), Gaps = 10/360 (2%)
Query: 50 RYLEHPIF-ELVSAHLKCVQSIQ-ANNFNEAYLSQSTIVQGFIK-MFQQCKEDNWLLPVV 106
R E +F E+V HL + +I A + A +Q I+Q F K + Q+ K++NW LP+
Sbjct: 58 RVSEDEVFDEIVCLHLHVLYNIHVAQDLITAQSTQIQIIQLFNKEILQKRKDENWFLPIF 117
Query: 107 QTVSLNLRLVSNKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSEND 166
+ +LR +S + A S +G+S A E+ + + C+R C SD E
Sbjct: 118 YRLCTDLRWLSKGAE--ACVSGDDEGDSNANS--FFESAAKAITECYRTCVSDVHAEEGT 173
Query: 167 SKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIES--SQYKDKSSLSQQITYKYYVGRKA 224
+KK ML NQLF++YF+I+KL+L+KPLIRAI++ S Y D +S ++ Y Y++GRKA
Sbjct: 174 TKKVAMLNMTNQLFQIYFQINKLNLLKPLIRAIDNCGSLYHD-FLMSDKVAYNYFLGRKA 232
Query: 225 MFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLW 284
MFD+D A + L +AF+ C S NKR ILIYL+PVKM LG MPT +LL +Y L +
Sbjct: 233 MFDADLNLAEKSLLYAFRNCPADSMSNKRKILIYLIPVKMFLGHMPTSQLLHEYRLDEFQ 292
Query: 285 DVTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVEL 344
DV VK G + QL A+ ++ FFIKCGI+L+LEKL+MIT+R + I + + L
Sbjct: 293 DVVAGVKDGNLAQLDGALAANEAFFIKCGIFLMLEKLRMITFRTLFKKVSQIVGTAQIPL 352
Query: 345 QQFLQALHYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIAS 404
F AL +V +D+++ C++ NLI ++KGY+S HQK+V+SK + FP LS ++S
Sbjct: 353 DAFQTALRFVGVTDVDMDELECIIANLIASKKIKGYLSHQHQKLVISKMNAFPTLSGVSS 412
>sp|Q60YJ7|PCID2_CAEBR PCI domain-containing protein 2 homolog OS=Caenorhabditis briggsae
GN=CBG18211 PE=3 SV=1
Length = 413
Score = 261 bits (668), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 216/352 (61%), Gaps = 7/352 (1%)
Query: 56 IFELVSAHLKCVQSIQ-ANNFNEAYLSQSTIVQGFIK-MFQQCKEDNWLLPVVQTVSLNL 113
I E+V HL + S+ A + + +Q I+Q F K + Q+ K++NW LP+ + +L
Sbjct: 65 IDEIVCLHLHVLHSVHVAKDLISSQSTQIRIIQLFNKEILQKRKDENWFLPIFYRLCTDL 124
Query: 114 RLVSNKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGML 173
R +S + + AS +G+S A E+ + + C+R C SD E +KK ML
Sbjct: 125 RWLSKGAE--SCASGDDEGDSNANS--FFESAAKAITECYRTCVSDVHAEEGKTKKVAML 180
Query: 174 PFVNQLFKVYFRISKLHLMKPLIRAIES-SQYKDKSSLSQQITYKYYVGRKAMFDSDYKT 232
NQLF++YF+I+KL+L+KPLIRAI++ +K ++ ++ Y Y++GRKA+FD D
Sbjct: 181 NMTNQLFQIYFQINKLNLLKPLIRAIDNCGPLYNKFLMADKVAYNYFLGRKALFDGDLIL 240
Query: 233 ANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTVAVKG 292
A + L +AF+ C S NKR IL+YL+PVKM LG MPT LL +Y L + +V AVK
Sbjct: 241 AEKGLVYAFRNCPTESVSNKRKILVYLIPVKMFLGHMPTASLLHRYRLDEFQEVVAAVKD 300
Query: 293 GQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSVVELQQFLQALH 352
G + ++ +A+ + FFIKCGIYL+LEKL+ ITYRN + + + L F AL
Sbjct: 301 GHLGRVDNALLTNGEFFIKCGIYLVLEKLRTITYRNLFKKVSQMVGKVQIPLDAFQAALR 360
Query: 353 YVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIAS 404
+V +D+++ C++ NLI + ++KGY++ HQK+V+SKT+ FP LS+++S
Sbjct: 361 FVGVTDVDMDELECIIANLIAEKKVKGYLAHQHQKLVISKTNAFPTLSSVSS 412
>sp|Q54PX7|PCID2_DICDI PCI domain-containing protein 2 homolog OS=Dictyostelium discoideum
GN=pcid2 PE=3 SV=1
Length = 430
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 213/359 (59%), Gaps = 12/359 (3%)
Query: 45 DYVIRRYLEHPIFELVSAHLKCVQSIQANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLP 104
D + ++H E+V+ L+ + S+ + + +A+ + F+K+F+ W
Sbjct: 77 DTLCANKIQHNYNEIVAYRLRSISSLLDSKYYDAFRYLIEAINSFVKVFEL-----WSQN 131
Query: 105 VVQTVSLNLRLVSNKVDNKALASSIQDGNSGAKPRDALETTTEMLMT-CFRICTSDNRTS 163
++ +SL+LRL++ ++ + S+ + ++ D E + L++ CF+ +D +
Sbjct: 132 ILWRLSLDLRLMA-ELATLNVGSNDSNNSNNNVTIDYFEEASRTLLSKCFQAANADRTPN 190
Query: 164 ENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYKDKSS--LSQQITYKYYVG 221
+SKK L VNQLF++YF+I+ L L K LI+ +ES + S L+Q ITY+++ G
Sbjct: 191 LAESKKNAALGVVNQLFQIYFKINNLKLCKNLIKTMESPGFPTLESYPLNQVITYRFFNG 250
Query: 222 RKAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLL 281
R ++F+ YK A E L +AF +C S KNKRLIL++LVP+++ P + LL+K+ L
Sbjct: 251 RLSVFNGQYKKAQEELLYAFNKCPNDSIKNKRLILLFLVPMQLEQCKFPKKSLLEKFKLT 310
Query: 282 QLWDVTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRNFYNIHKDINKNSV 341
Q D+ ++K G I Q ++ ++ HQ FFI GIYLILEKLK+I YRN + I
Sbjct: 311 QFIDIVQSIKSGNIKQFNECLSTHQNFFISKGIYLILEKLKIIVYRNLFKKVHLITTGQR 370
Query: 342 VELQQFLQALHYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQ-KVVLSKTDPFPKL 399
+ + F+ AL ++E ID+++T C+L NLI++G LKGYIS H+ +V+S T+PFPKL
Sbjct: 371 IPIGNFVSALKWMENDAIDIDETECILSNLIYNGYLKGYIS--HKVALVVSPTNPFPKL 427
>sp|P0CR48|CSN12_CRYNJ Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=CSN12 PE=3
SV=1
Length = 403
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 187/353 (52%), Gaps = 18/353 (5%)
Query: 58 ELVSAHLKCVQSI-QANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLV 116
E+ H CV ++ + ++ EA+ Q ++ F + F + +W+LPV+ + +LR +
Sbjct: 61 EIAVRHCACVYALYKTKDYTEAFNQQDKLLSLFYRWF--VDQSSWVLPVLYMMLSDLRDL 118
Query: 117 SNKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFV 176
+ + D A +G P +LE T + F +C +D + +S++ G+
Sbjct: 119 AEQADQTIHA------ETGKMP--SLEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTA 170
Query: 177 NQLFKVYFRISKLHLMKPLIRAIES---SQYKDKSSLSQQITYKYYVGRKAMFDSDYKTA 233
K YF++ K +L K +IRA+ S + D + L Q+T+ +Y+G A + + K A
Sbjct: 171 CLTIKCYFKVGKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKA 230
Query: 234 NEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTV--AVK 291
+E L++A + C +K+N+ LIL YL+P+++L G P+ LL ++ L+L A+K
Sbjct: 231 DEELSWALKHCPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIK 290
Query: 292 GGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRN-FYNIHKDINKNSVVELQQFLQA 350
G + + + Q + ++L++E+ + R+ F +K++ V ++ F A
Sbjct: 291 NGDVEEYDRRLEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMASDKSTRVPIETFRLA 350
Query: 351 LHYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIA 403
L + G ++ ++ C++ N+I+ G LKGYIS + VVL KT+PFPK+S IA
Sbjct: 351 LK-LHGVDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMSTIA 402
>sp|P0CR49|CSN12_CRYNB Protein CSN12 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=CSN12 PE=3 SV=1
Length = 403
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 187/353 (52%), Gaps = 18/353 (5%)
Query: 58 ELVSAHLKCVQSI-QANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLV 116
E+ H CV ++ + ++ EA+ Q ++ F + F + +W+LPV+ + +LR +
Sbjct: 61 EIAVRHCACVYALYKTKDYTEAFNQQDKLLSLFYRWF--VDQSSWVLPVLYMMLSDLRDL 118
Query: 117 SNKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFV 176
+ + D A +G P +LE T + F +C +D + +S++ G+
Sbjct: 119 AEQADQTIHA------ETGKMP--SLEICTRTVSKAFSLCATDRQFKGEESRRRGVYHTA 170
Query: 177 NQLFKVYFRISKLHLMKPLIRAIES---SQYKDKSSLSQQITYKYYVGRKAMFDSDYKTA 233
K YF++ K +L K +IRA+ S + D + L Q+T+ +Y+G A + + K A
Sbjct: 171 CLTIKCYFKVGKPNLCKNIIRAVVSDPKTPSVDTAPLPDQVTWHFYIGMLAFLNGEDKKA 230
Query: 234 NEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYDLLQLWDVTV--AVK 291
+E L++A + C +K+N+ LIL YL+P+++L G P+ LL ++ L+L A+K
Sbjct: 231 DEELSWALKHCPADAKRNQELILTYLIPLRLLHGRFPSASLLSQHPRLELVFTPFINAIK 290
Query: 292 GGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRN-FYNIHKDINKNSVVELQQFLQA 350
G + + + Q + ++L++E+ + R+ F +K++ V ++ F A
Sbjct: 291 NGDVEEYDRRLEWAQVRLVGMSVWLVVERAREGCLRSLFKKAWMASDKSTRVPIETFRLA 350
Query: 351 LHYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIA 403
L + G ++ ++ C++ N+I+ G LKGYIS + VVL KT+PFPK+S IA
Sbjct: 351 LK-LHGVDVESDEVECMVANMIYRGYLKGYISHEKKMVVLGKTNPFPKMSTIA 402
>sp|Q4P8T5|CSN12_USTMA Protein CSN12 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=CSN12 PE=3 SV=1
Length = 454
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 172/356 (48%), Gaps = 20/356 (5%)
Query: 71 QANNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNKALASSIQ 130
++ EA+ + +++V F++ F W LP+++ + LNLR ++ + D+ A +S+
Sbjct: 98 RSERLGEAFDAYNSVVSAFVRYFSTLTPGRWALPLLRILCLNLRWLAVQADSAAHIASVS 157
Query: 131 D---GNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRIS 187
+ +P LE L F C +D ++S+KWG V +FK YFR+
Sbjct: 158 NTWAPTRSTQPNKRLEECARQLNKAFSACIADRNADMHESRKWGTYEVVGMVFKTYFRLK 217
Query: 188 KLHLMKPLIRAIESSQYKDKSSL--SQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCH 245
+ L + ++RAI ++ D + SQQ+T++YYVG A + +Y A L + Q CH
Sbjct: 218 SVGLCRNILRAINAADLPDLCAYPRSQQVTFRYYVGVLAFLNEEYDHAELELQASLQMCH 277
Query: 246 KSSKKNKRLILIYLVPVKMLLGFMPTRELLDKYD-----LLQLWDVTVAVKGGQINQLSD 300
+ + N+ LIL YL+PVK+L G +P LLD L T A++ G +
Sbjct: 278 RCALINQGLILTYLIPVKLLKGSLPHPSLLDPTTPIGRKLAVYQPFTRALRTGDVKAFDQ 337
Query: 301 AMTKH--QTFFIKCGIYLILEKLKMITYRNFYN---IHKDINKNSVVELQQFLQALHYVE 355
A+ ++ +K G Y+ +E+ + T R + +N + + L LH+
Sbjct: 338 ALANPTIESSLVKRGTYIAIERARDATLRTLLKTIWLSLPLNPTNTRPTRLTLTLLHHAT 397
Query: 356 GKHI-----DLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFPKLSAIASAT 406
+ +++ +L LI+ G +KGYI+ +VLS D FP L +A AT
Sbjct: 398 STDLIRLKYSIKELEWILATLIYKGYVKGYIAHERGVLVLSAKDAFPALRTVAIAT 453
>sp|Q4WJX0|CSN12_ASPFU Protein CSN12 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=csn12 PE=3 SV=1
Length = 455
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 171/348 (49%), Gaps = 39/348 (11%)
Query: 83 STIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNK-------ALASSIQDGNSG 135
+T+++G+ Q W +P + V LR+ + K D + A +QD +
Sbjct: 110 NTLIRGYTNFGLQA----WTVPCLYVVGKYLRVFAIKADTEISSKGAMAFGDQLQDDVAA 165
Query: 136 AKPRDA-LETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKP 194
+ A LE ++ F +C SD R +S+KWG+ N LFK YF+++ + L K
Sbjct: 166 DFEKSAKLEEAARIINRMFTLCLSD-RAPIEESRKWGIYNTTNLLFKTYFKLNSVGLSKN 224
Query: 195 LIRAIESSQYKDKSSL-----SQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSK 249
L+RA+ +S D L S +T+KYYVG D +Y+ A E+L +A+ CHK +
Sbjct: 225 LLRALSASS-ADLPELEAFPKSHIVTFKYYVGVIHFLDENYREAEEHLAYAWNMCHKGAF 283
Query: 250 KNKRLILIYLVPVKMLLGF-MPTRELLDKYDLLQ--LWDVTVAVKGGQINQLSDAMTKHQ 306
KN+ LIL YLVP ++ +P+++LL + L+ + ++ G + AM +
Sbjct: 284 KNRELILTYLVPCHLVTTHTLPSQKLLAPFPRLEKLFRPLCDCIRKGDLVGFDTAMFAGE 343
Query: 307 TFFIKCGIYLILEKLKMITYRNFYNI---------HKDIN---KNSVVELQQFLQAL--- 351
F+K IYL LE+ + I RN + KD + + V + +F AL
Sbjct: 344 EEFVKRRIYLPLERGRDIALRNLFRKVFIAGGFEESKDGQPPIRRTRVPVAEFAAALRIG 403
Query: 352 -HYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQKVVLSKTD-PFP 397
H + +D+++ CLL NLI+ G +KGYI+ VVLSK FP
Sbjct: 404 THADDRSRVDIDEVECLLSNLIYKGLMKGYIARERGMVVLSKGGTAFP 451
>sp|O13873|CSN12_SCHPO Protein CSN12 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=csn12 PE=3 SV=1
Length = 423
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 11/330 (3%)
Query: 78 AYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVDNKALASSIQ---DGNS 134
A+ Q+ + Q + F + LPV+ V +LR ++ N L Q
Sbjct: 92 AFKQQTELAQHLYREFSSGRCTGVHLPVLFIVCKDLRFLAINAHNAMLRRKQQLKVISVD 151
Query: 135 GAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKP 194
++ + LE T ++ F IC +D R + S+KWG + LFK+Y R+ +HL
Sbjct: 152 ESEENEQLEATARLINRAFTICIND-RAPLSTSRKWGAYYIMGLLFKLYLRLDCVHLTNN 210
Query: 195 LIRAIESSQYKDKSSL--SQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKNK 252
++RA++ + D S S + + YY+G A + +YK A+ L AF CHK +N
Sbjct: 211 VLRAMKVVELPDISLFPKSHVVIFHYYLGIVAFLNQNYKNASAELEIAFSLCHKGYNRNL 270
Query: 253 RLILIYLVPVKMLLGF-MPTRELLDKY-DLLQLW-DVTVAVKGGQINQLSDAMTKHQTFF 309
LIL Y +P ++L+ +PT+ LL K+ +L ++ +T A+K G + + + K++T
Sbjct: 271 ELILSYWIPTRILVNHQLPTKNLLSKFPNLASVYIPLTRALKSGNLGEFGKCLQKNETLL 330
Query: 310 IKCGIYLILEKLKMITYRNFYNIHKDI-NKNSVVELQQFLQALHYVEGKHIDLEDTHCLL 368
K IYL LE + + RN + I K++ + + F AL V G + +L
Sbjct: 331 AKTKIYLTLEGTRDLCIRNLFRKTWIICGKSTRLPVSVFQIALQ-VAGTDLPKLHVEAIL 389
Query: 369 CNLIHDGQLKGYISLAHQKVVLSKTDPFPK 398
N+I G ++GYIS + VVLS DPFPK
Sbjct: 390 ANMISKGYMRGYISRNFETVVLSAKDPFPK 419
>sp|Q4IMN9|CSN12_GIBZE Protein CSN12 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=CSN12 PE=3 SV=2
Length = 455
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 57/432 (13%)
Query: 9 QRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEH----PIFELVSAHL 64
QR+ VW R +N SV K+ F K+ + +R L+H E+ +++
Sbjct: 34 QRLMAVW--RSTNSHSVKGDIKH-------FIKSSTAH--KRKLDHDETTGWVEVYTSYW 82
Query: 65 KCVQSIQA-----NNFNEAYLSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNK 119
K V I A +++ + Y + + I+ + + W +P + V LRL + K
Sbjct: 83 KAVSEILAGESGKSSWTKVYEAWKELTSVLIRGYNSHGFEAWTIPSLYMVGKYLRLFAIK 142
Query: 120 VDNKALASSIQDGNSGAKPRDALETTTE---MLMTC-------FRICTSDNRTSENDSKK 169
D + A + G + D + T+ L C F +C +D R +S+K
Sbjct: 143 SDEERRAKAFDTGPGASLISDDFDPETDKQLQLRDCEGHLKRIFSLCLND-RAPLEESRK 201
Query: 170 WGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYKDKSSL--------SQQITYKYYVG 221
WG+ +N LFK YF+++ L + +++ + + Y DK + SQ++T+K+Y G
Sbjct: 202 WGIYFVINLLFKTYFKLNSASLSRTILKTL--AVYNDKGDMPPLEMFPKSQRVTFKFYEG 259
Query: 222 RKAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLG-FMPTRELLDKYDL 280
+ +Y A +L A+Q CHK + IL YL+P ++L +PT+ LL+ Y
Sbjct: 260 VLLFLEENYIKAESHLNEAWQLCHKDAYPQSERILTYLIPCRLLTSHVLPTKALLENYPR 319
Query: 281 LQ--LWDVTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRNF--------- 329
LQ + +K G + A+ + + F+K IYL LE+ + I RN
Sbjct: 320 LQDLFLPLATCIKTGNLQAFDQALQRGEAEFVKRRIYLTLERGRDIALRNLLRKVFIAGG 379
Query: 330 YNIHKDINKNSV----VELQQFLQALHYVEGKHIDLEDTHCLLCNLIHDGQLKGYISLAH 385
++ K+ + V + + +F A+ G +D ++ C+L N+I+ +KGYI+
Sbjct: 380 FDEAKEADAAPVRRTRIPVAEFQAAISMGSGHLVDPDEVECMLANMIYKDLMKGYIARER 439
Query: 386 QKVVLSKTDPFP 397
VVLSK FP
Sbjct: 440 GIVVLSKKGAFP 451
>sp|Q6C1L4|CSN12_YARLI Protein CSN12 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=CSN12 PE=3 SV=1
Length = 396
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 166/328 (50%), Gaps = 18/328 (5%)
Query: 87 QGFIKMFQQC--KEDNWLLPVVQTVSLNLRLVSNKVDNKALASSIQDGNSGAKPRDALET 144
Q F+ + KED W+LP++ S +LR + +AL IQD + + LE+
Sbjct: 76 QAFLSELNRVSEKEDVWILPILYAASTHLR----GIGRRAL-KEIQDKEAKNEILTQLES 130
Query: 145 TTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQY 204
++ ++ +C +D S SKKWG FV +L K+YF + K ++ K +I+ +ES
Sbjct: 131 SSRVVNRTLTLCLNDRHPSLQKSKKWGTYFFVGELCKLYFLLRKRNMSKSVIKVVESMS- 189
Query: 205 KDKSSL-----SQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYL 259
+D L S TY YY G ++ D D + A +LT A +C S N+ LIL++L
Sbjct: 190 RDLPPLASYPRSHTCTYSYYRGVLSLMDDDVEQAQNWLTQALNQCFYKSTDNQELILLHL 249
Query: 260 VPVKMLL-GFMPTRELLDKYDLLQL--WDVTVAVKGGQINQLSDAMTKHQTFFIKCGIYL 316
+PV+ L+ +P++ + +K+ L + A+ G + A+T+ ++ F+K +YL
Sbjct: 250 IPVQFLMTNQVPSKAVWEKFPRLHTVYHQMLTALLRGDVLSFDKAVTQRRSLFVKKYLYL 309
Query: 317 ILEKLKMITYRN-FYNIHKDINKNSVVELQQFLQALHYVEGKHIDLEDTHCLLCNLIHDG 375
+EK+++ + FY + +K + + + + QA + G + + + N+I+
Sbjct: 310 AVEKMRVFVFEKLFYRVFLAKDKATRITIDDY-QAAAKLVGVDVSPDFLEATVSNMIYHD 368
Query: 376 QLKGYISLAHQKVVLSKTDPFPKLSAIA 403
+LKGYIS VVL FPKL A
Sbjct: 369 RLKGYISRERHTVVLRAEGAFPKLDHAA 396
>sp|Q7SD63|CSN12_NEUCR Protein CSN12 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-12
PE=3 SV=1
Length = 461
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 51/358 (14%)
Query: 80 LSQSTIVQGFIKMFQQCKEDNWLLPVVQTVSLNLRLVSNKVD---NKALASSIQDG---- 132
L + I QGF + W +P + V+ NLR + K D N +A+ G
Sbjct: 111 LYRGYIGQGF---------EAWSIPCLYVVAKNLRFFALKADEERNNNVAAGDTSGQIFQ 161
Query: 133 ---NSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKL 189
+ ++ LE L F +C +D R +S+KWG+ +N LFK YF+++
Sbjct: 162 DDFDPESEQNQKLEDCARQLNRIFTLCLND-RAPLEESRKWGIYYIINLLFKTYFKLNSA 220
Query: 190 HLMKPLIRAIESSQYKDKSSLS-----QQITYKYYVGRKAMFDSDYKTANEYLTFAFQRC 244
L K +++ + S+ D LS QQ+T+KYY G + +Y A E+LT A+ C
Sbjct: 221 SLSKNILKTL-SAYRGDMPPLSAFPKSQQVTFKYYEGVLCFLEENYFQAEEHLTQAWSLC 279
Query: 245 HKSSKKNKRLILIYLVPVKMLLGF-MPTRELLDKYDLLQ--LWDVTVAVKGGQINQLSDA 301
HK + KNK LIL YLVP +L +P+++LL+ Y LQ ++ +K G+++ A
Sbjct: 280 HKDAMKNKELILTYLVPCHLLTTHTLPSQKLLEPYPRLQKLFLPLSNCIKKGELHAFDLA 339
Query: 302 MTKHQTFFIKCGIYLILEKLKMITYRNFYN---IHKDINKNSV----------VELQQFL 348
+ + + F+K IYL LE+ + I RN I ++ V + + +F
Sbjct: 340 LQQGEDEFVKRRIYLTLERGRDIALRNLLRKVFIAGGFEESKVEGGPRVRRTRIPVAEFA 399
Query: 349 QALHYVEGKHIDLEDTHCLLCNLIH---------DGQLKGYISLAHQKVVLSKTDPFP 397
A+ + ++ ++ CL+ N+I+ +KGYI+ VVLSK+ FP
Sbjct: 400 AAISLGSKQMLETDEIECLMANMIYKLVTNQSGIKNLMKGYIARERGFVVLSKSGAFP 457
>sp|Q9Y820|YON7_SCHPO PCI domain-containing protein C1105.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1105.07c PE=4
SV=1
Length = 442
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 154/317 (48%), Gaps = 16/317 (5%)
Query: 101 WLLPVVQTVSLNLRLVSNKVDNKA--LASSIQDGNSGAKPRDALETTTEMLMTCFRICTS 158
WL +V+ VS +S ++D L S DGN G R + + ++ F S
Sbjct: 110 WLCTIVKRVSKLYVKLSLQLDTSTPTLEDSF-DGN-GFIQRKYVSDASRNVLRTFNSILS 167
Query: 159 DNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPL-IRAIESSQYKDKSSLSQQITYK 217
D + + N SKK + N L +YFR+ ++ L + + I S ++++++ +T++
Sbjct: 168 DRQQNINPSKKDAIFCIANLLCLLYFRLKQIRLCQTIQANVISSGADISRATMAELVTFR 227
Query: 218 YYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLGFMPTRELLDK 277
YY+GR ++ A ++L F+F +C KRL LIYL ++LG PT+ LL+K
Sbjct: 228 YYLGRCHLYQRKIHQAKDHLLFSFLQCPDECYHQKRLSLIYLTTCLLILGKSPTKGLLEK 287
Query: 278 YDLLQLWDVTV-AVKGGQIN--QLSDAMTKHQTFFIKCGIYL-ILEKLKMITYRNFYN-- 331
Y L ++ + A+K G I +LS + +FIK GIYL +L++ ++I +RN +
Sbjct: 288 YKLTAAFEPLIKALKSGDIKSFRLSLEDNSRRKWFIKRGIYLTLLDRCEIILWRNLFRKV 347
Query: 332 ---IHKDINKNSVVELQQFLQALHY-VEGKHIDLEDTHCLLCNLIHDGQLKGYISLAHQK 387
+ K V L A D++D C+ +LI G +KGYI A
Sbjct: 348 FLFTFEQSQKTPHVSGSYLLTAARLSTNDNSYDMDDVECICVSLIDQGYIKGYIIHASST 407
Query: 388 VVLSKTDPFPKLSAIAS 404
+VL K DP S I S
Sbjct: 408 LVLKK-DPSFGFSVIES 423
>sp|Q6BGR7|CSN12_DEBHA Protein CSN12 homolog OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CSN12 PE=3
SV=2
Length = 438
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 200/441 (45%), Gaps = 51/441 (11%)
Query: 2 SAVERYLQRVKMVWEGRDSNGLSVCFSFKNPTFKHEDFQKNVEDYVIRRYLEHPIFE--- 58
+ + Y+Q+V + DS C + NP + + + + HPI E
Sbjct: 3 TPLSDYIQKVCLSVNLEDSQKFRSCITI-NPGINEGTIRAHFPE--PNDFDLHPIPEKFR 59
Query: 59 -LVSAHLKCVQSIQ-ANNFNEAYLSQSTIVQGFIKMFQQCKEDNWL-LPVVQTVSLNLRL 115
+V ++LK ++S+ AN+ N ++ + +V + + NW+ P++ + L
Sbjct: 60 NVVKSYLKLMKSVYIANSINASFFDLNEMVNNLNRAADT--QTNWINQPLINACT---EL 114
Query: 116 VS-------NKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICTSDNRTSENDSK 168
+S N + + + S + N +LE + F++ +D + SK
Sbjct: 115 ISVYQVRSKNFPEEEEMELSNLENNEYGNSSSSLERLAATINGSFKLSLNDKNLDLSQSK 174
Query: 169 KWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYK------DKSSLSQQITYKYYVGR 222
+ + F+ L K+YF++ KL L K + +A++ +++ SS +TY YY
Sbjct: 175 RLDIYFFLGNLIKIYFKLGKLELAKSVEKALKGTRFNLPKLNGAGSSKRYAVTYLYYSAL 234
Query: 223 KAMFDSDYKTANEYLTFAFQ--RCHKSSKKNKRLILIYLVPVKMLLGF----MPTRELLD 276
++ D+D+ T+ E L A + C+K K K L+ + L + P+ E+ +
Sbjct: 235 LSLDDADFTTSEEKLVKAMEILSCYKDPKNVKNQTEKILIILLPLKLYNKRLTPSNEIWE 294
Query: 277 KYDLLQLW---DVTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLKMITY----RNF 329
K+ L+ ++ A+K G + + A+TK+Q +K +YL+ E +K + Y +
Sbjct: 295 KFPKLKFMYKDNLFDAIKNGNLKKFDQALTKYQLILLKNHLYLLFEMMKSLCYLKLVKKT 354
Query: 330 YNIHKDIN---KNSVVELQQFLQALHYVEGKHI--------DLEDTHCLLCNLIHDGQLK 378
+I +N K+ +V L AL + +L+ C+L NLI G++K
Sbjct: 355 VSIIHSLNSETKSHIVPLSAIQLALEFSTNDSYKESDKFAYNLDAVECILANLISSGKIK 414
Query: 379 GYISLAHQKVVLSKTDPFPKL 399
GY+S A++ +VLSK + FP L
Sbjct: 415 GYLSHANRCIVLSKANAFPSL 435
>sp|Q75BU2|CSN12_ASHGO COP9 signalosome complex subunit 12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSN12
PE=3 SV=2
Length = 412
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 37/331 (11%)
Query: 98 EDNWLLPVVQTVSLNLRLVSNKVDNKALASSIQDGNSGAKPRDALETTTEMLMTCFRICT 157
E W++ + T + L ++ +D + ++ D L + +C
Sbjct: 83 ESGWVVYPLYTCARQLVQMAAALDARTERAAEAAQCGDLATEDHLTQCGRAVHMSLNLCL 142
Query: 158 SDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQ---------YKDKS 208
D R +K+ G F LF+ Y R+ L+ +++ +ES + ++
Sbjct: 143 KD-RDPAASNKRHGAYYFALLLFRTYARLGAHSLVTNMVKVLESRAQDLPPVERAFGERR 201
Query: 209 SLSQQITYKYYVGR-KAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYLVPVKMLLG 267
+L+ +TY YY+GR A +DY+ +L A CH+ ++ +LIL YLVPV L
Sbjct: 202 ALT--VTYCYYLGRYHACRRADYEKGFRWLNTALLTCHRDHTRHHQLILTYLVPVAFL-- 257
Query: 268 FMPTRELLDKYDLLQLWD------------VTVAVKGGQINQLSDAMTKHQTFFIKCGIY 315
R K+ ++ W + A++ G + + + Q ++ G+Y
Sbjct: 258 ---ARRWYPKHHVIAAWPPPQDPAAIHYAALVAALRSGDLGLYDRELVRMQLPLLRRGLY 314
Query: 316 LILEKLK-MITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHID------LEDTHCLL 368
L L L+ I R + + +S + ++ AL Y D L+ T CLL
Sbjct: 315 LPLSHLRPYILLRLVKAVWRLSGGSSQLPIRIIAAALAYSTSATPDAGGERLLDHTECLL 374
Query: 369 CNLIHDGQLKGYISLAHQKVVLSKTDPFPKL 399
NLI G +KGY+S ++ +V+S+T+PFP+L
Sbjct: 375 ANLIARGYVKGYLSHGNRVLVVSRTEPFPRL 405
>sp|P47130|CSN12_YEAST Cop9 signalosome complex subunit 12 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CSN12 PE=1 SV=1
Length = 423
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 153/350 (43%), Gaps = 61/350 (17%)
Query: 90 IKMFQQC--KEDNWLLPVVQTVSLNLRLVSNKVDNKALASSIQDGNSGAKPRDALETTTE 147
+K+F + +E NW++ + ++ L ++N+ S +D++E
Sbjct: 90 LKLFNRIVERETNWIIYPLWVMAKQLIRLANE--------------SSELNKDSIEECGR 135
Query: 148 MLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESS-QYKD 206
+ F IC +D N++KK G F N F +Y R+S ++K L++ +ES +D
Sbjct: 136 TIHRSFTICLNDRNPRLNENKKIGCYMFANLEFSIYHRLSNKDMIKNLVKVLESRVNARD 195
Query: 207 KSSL---------SQQITYKYYVGR-KAMFDSDYKTANEYLTFAFQRCH----KSSKK-- 250
L SQ + Y YY+G+ ++D++ +L A +C +S+ K
Sbjct: 196 IPPLNKSLAMEHKSQVVLYNYYLGQYYGCLENDHERGFFHLNEALLQCPMLYVESTGKFV 255
Query: 251 ---NKRLILIYLVPVKMLLGFMPTRELLDKYD-------------LLQLWDVTV-AVKGG 293
I+I LVP+ +L T+ L +D L Q++ V +V G
Sbjct: 256 LQGQMEKIMILLVPLALL-----TKRLYPHWDHPVIAGVITRSKRLSQVYPTLVRSVISG 310
Query: 294 QINQLSDAMTKHQTFFIKCGIYLILEKLKMITYRNFYN--IHKDINKNSVVELQQFLQAL 351
++ H+ FF+ G+++++ L+ + + ++ S++ L+ L
Sbjct: 311 NLSLYEATAASHERFFLSQGLHVVITLLREVVFTRLVQRCWQWGNDRKSIMPLKILLATK 370
Query: 352 HYVEGKHIDLEDT----HCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFP 397
+ + D E+ C L + I G L+ Y+S +++ +V SK +PFP
Sbjct: 371 QHDSSANEDEEEQLDALECRLASAIASGLLRAYLSHSNRCIVFSKKEPFP 420
>sp|Q6CPB1|CSN12_KLULA COP9 signalosome complex subunit 12 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CSN12 PE=3 SV=1
Length = 424
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 31/331 (9%)
Query: 100 NWLLPVVQTVSLNLRLVSNKVDN-KALASSIQDGNSGAKPRDALETTTEMLMTCFRICTS 158
NW+ ++ L ++NK+D + +D G + L ++ IC
Sbjct: 90 NWMTELLYQSGEQLYAIANKLDEIQNKLDGPEDTGDGDEEESYLIQAGRVMHMTLNICFK 149
Query: 159 DNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYKDKSSLSQ------ 212
D ++++K G+ LFK+Y RI L+ + + ES + LS+
Sbjct: 150 DRNERVDENRKIGVFYIGTLLFKLYNRIKAYGLLNNMCKVFESHFNEIGPYLSRINNDLI 209
Query: 213 QITYKYYVGRKAMFD-SDYKTANEYLTFAFQRCH-----KSSKKNKRLILIYLVPVKML- 265
I +K+Y+G ++ ++Y ++L F C S+ K + +LIYL+P+++L
Sbjct: 210 VIRFKFYMGLYYGYEKNNYALGFKWLQETFDICTLYESIPSTYKVRSQVLIYLIPMRILH 269
Query: 266 LGFMPTRELLDKY--DLLQLWDVTV-AVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLK 322
L P L + + +++ + V ++ G + + ++ + +K +Y+ + K+K
Sbjct: 270 LRHYPRLAPLRRTYPSVAKIYTMLVKSLCTGNLKLYEKFIEDNEFYLVKRNLYVTVLKMK 329
Query: 323 MITYRNFYNIHKDINK-NSVVELQQFLQALHYVEGK--HI----------DLEDTHCLLC 369
+ +N N+ V L +A G H+ +L++ C+L
Sbjct: 330 ELVELKLVKKAWILNGGNTKVPLDMLAKAFQISRGTPCHVTENVAPNHDQELDELECILA 389
Query: 370 NLIHDGQLKGYISLAHQKVVLSKTDPFPKLS 400
LI +KGY+S +H+ ++ SKT PFP L+
Sbjct: 390 TLISKNYIKGYLSHSHRVMMTSKT-PFPGLA 419
>sp|Q6FJ48|CSN12_CANGA COP9 signalosome complex subunit 12 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CSN12 PE=3 SV=1
Length = 449
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 143 ETTTEMLMTCFRICTSDNRTSENDSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESS 202
E ++ F IC +D + ++K+ G + F N Y + +MK LI+ +ES+
Sbjct: 151 EECIRVIHRSFMICLNDKNPNMQENKRGGCILFANLEMMFYKMLRNRDMMKNLIKVLEST 210
Query: 203 QYKD----------KSSLSQQITYKYYVGRK-AMFDSDYKTANEYLTFA---FQRCHKSS 248
D K SQ+I + Y++G + + A E+L F + SS
Sbjct: 211 GMTDISRQRDNKVLKRHRSQKIIFNYFIGEYYGCYLFQFNKAQEHLQVCVSEFPVKYTSS 270
Query: 249 KKNKRLILIY-----LVPVKMLLGFMPTRELLDKYDLLQLWDV-TVAVKGGQINQLSDAM 302
K KR+I +Y L L+ RE +K+ D+ K G + +
Sbjct: 271 KWFKRIIHLYTQFRMLATSNKLIHVELPRETNEKFANAYDSDLMNKCYKNGDTIVFDELI 330
Query: 303 TKHQTFFIKCGIYLILEKLKMITYRNFYNIHKDIN-KNSVVELQQFLQA--LHY------ 353
+H ++ G Y + +K + + + +N K S++ L +H+
Sbjct: 331 KEHAAQYLIDGTYSAMLLIKELVFLRLVKVCYKVNDKKSILPLDLIAAGYRIHFRNHDNE 390
Query: 354 -----------VEGKHIDLEDT-HCLLCNLIHDGQLKGYISLAHQKVVLSKTDPFP 397
++ K+ DL D C + NLI +G++KGY+S + + +VLSKT+PFP
Sbjct: 391 ENRVTTTNPRKLQKKNEDLLDELECRIANLIANGRIKGYLSHSQRCMVLSKTEPFP 446
>sp|Q08231|THP1_YEAST Nuclear mRNA export protein THP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THP1 PE=1 SV=1
Length = 455
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 160 NRTSEN-DSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQ---YKDKSSLSQQIT 215
N +S N K+ +L VN+L +YFRI L + + + + ++ L QQI
Sbjct: 162 NASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221
Query: 216 YKYYVGRKAMFDSDYKTANEYLTFAFQR------CHKSSKKNKRLILIYLVPVKMLLGFM 269
Y+Y +GR + +S A AFQ +++ +N IL Y++P ++LG M
Sbjct: 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKM 281
Query: 270 ----PTRELLDKYDLLQLWDVTVA-VKGGQINQLSDAMTKHQTFFIKCG---IYLILEKL 321
P R L + + + W V V+ G I +S + +++ C + ++LEKL
Sbjct: 282 VKWGPLRPFLSQ-ETIDNWSVLYKHVRYGNIQGVSLWLRQNERHL--CARQLLIVLLEKL 338
Query: 322 KMITYRNF 329
M+TYRN
Sbjct: 339 PMVTYRNL 346
>sp|O42897|RPN3_SCHPO Probable 26S proteasome regulatory subunit rpn3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn3 PE=3 SV=2
Length = 497
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 197 RAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKNKRLIL 256
R + + + +S + I Y+YY+GR DY TA+E+L A ++ + + L
Sbjct: 231 RLVSKTSFLTNASNNLAIRYQYYLGRIRAIQLDYTTAHEHLVSAIRKAPNTVYAVQFLEA 290
Query: 257 IYL--VPVKMLLGFMPTRELLDKYD----LLQLWDVTVAVKGGQINQLSDAMTKHQTFFI 310
+Y + V++L+G +P R + + L+ ++ AV+ G + +DA++K++ F
Sbjct: 291 VYKLHIVVQLLMGEIPERRIFRQKSLEKTLVPYLRISQAVRIGDLCAFTDALSKYEAEFR 350
Query: 311 KCGIYLILEKLK 322
G+Y ++ +L+
Sbjct: 351 FDGLYTLICRLR 362
>sp|Q1ZXD3|PSMD3_DICDI 26S proteasome non-ATPase regulatory subunit 3 OS=Dictyostelium
discoideum GN=psmD3 PE=1 SV=1
Length = 504
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 171 GMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAMFDSDY 230
G +N L + Y + +L + + + ++Q+ + +S +Q Y YY GR +Y
Sbjct: 214 GQATIINLLLRNYL---EYNLFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEY 270
Query: 231 KTANEYLTFAFQRCHKSSKKN-KRLILIYLVPVKMLLGFMPTRELLD----KYDLLQLWD 285
+ ++LT A ++ +++ +R + L V++L+G +P R K L +
Sbjct: 271 AESFKFLTQAIRKAPQNTAGGFRRTVYKLLSIVQLLMGEIPERNTFSQKQLKIALKPYFH 330
Query: 286 VTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLK 322
+T AV+ G + + A+ ++ F + ++++L+
Sbjct: 331 LTEAVRVGDLGSFNQALEQNSDIFKSDQTFTLVQRLR 367
>sp|P40016|RPN3_YEAST 26S proteasome regulatory subunit RPN3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN3 PE=1 SV=5
Length = 523
Score = 38.5 bits (88), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 166 DSKKWGMLPFVNQLFKVYFRISKLHLMKPLIRAIESSQYKDKSSLSQQITYKYYVGRKAM 225
D++ ML +N + + + ++ I +E SSL + Y +Y+ +
Sbjct: 226 DNETKAML--INLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEAR--YFFYLSKINA 281
Query: 226 FDSDYKTANEYLTFAFQRCHKSSKKNKRLILIYL-------VPVKMLLGFMPTRELLDKY 278
DY TANEY+ A ++ +SK L +L +++L+G +P +
Sbjct: 282 IQLDYSTANEYIIAAIRKAPHNSKS-----LGFLQQSNKLHCCIQLLMGDIPELSFFHQS 336
Query: 279 D----LLQLWDVTVAVKGGQINQLSDAMTKHQTFFIKCGIYLILEKLK 322
+ LL + +T AVK G + + + +TK++ +K Y + +L+
Sbjct: 337 NMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDDTYQLCVRLR 384
>sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens
GN=PSMD3 PE=1 SV=2
Length = 534
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 199 IESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKN-KRLILI 257
+ S + ++++ ++ Y YY GR +Y A +T A ++ + + K+ +
Sbjct: 271 VSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHK 330
Query: 258 YLVPVKMLLGFMPTRELLD----KYDLLQLWDVTVAVKGGQINQLSDAMTKHQTFFIKCG 313
L+ V++LLG +P R K L+ + +T AV+ G + + + + + F G
Sbjct: 331 LLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADG 390
Query: 314 IYLILEKLKM-ITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHID-LEDTHCLLCNL 371
Y ++ +L+ + I ++ S+ ++ Q LQ +D ED ++
Sbjct: 391 TYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQ---------LDSPEDAEFIVAKA 441
Query: 372 IHDGQLKGYISLAHQK 387
I DG ++ S+ H+K
Sbjct: 442 IRDGVIEA--SINHEK 455
>sp|Q2KJ46|PSMD3_BOVIN 26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus
GN=PSMD3 PE=2 SV=1
Length = 534
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 199 IESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKN-KRLILI 257
+ S + ++++ ++ Y YY GR +Y A +T A ++ + + K+ +
Sbjct: 271 VSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHK 330
Query: 258 YLVPVKMLLGFMPTRELLD----KYDLLQLWDVTVAVKGGQINQLSDAMTKHQTFFIKCG 313
L+ V++LLG +P R K L+ + +T AV+ G + + + + + F G
Sbjct: 331 LLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADG 390
Query: 314 IYLILEKLKM-ITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHID-LEDTHCLLCNL 371
Y ++ +L+ + I ++ S+ ++ Q LQ +D ED ++
Sbjct: 391 TYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQ---------LDSPEDAEFIVAKA 441
Query: 372 IHDGQLKGYISLAHQK 387
I DG ++ S+ H+K
Sbjct: 442 IRDGVIEA--SINHEK 455
>sp|P14685|PSMD3_MOUSE 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus
GN=Psmd3 PE=1 SV=3
Length = 530
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 199 IESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKN-KRLILI 257
+ S + ++++ ++ Y YY GR +Y A +T A ++ + + K+ +
Sbjct: 267 VSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHK 326
Query: 258 YLVPVKMLLGFMPTRELLD----KYDLLQLWDVTVAVKGGQINQLSDAMTKHQTFFIKCG 313
L+ V++LLG +P R K L+ + +T AV+ G + + + + + F G
Sbjct: 327 LLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDG 386
Query: 314 IYLILEKLKM-ITYRNFYNIHKDINKNSVVELQQFLQALHYVEGKHID-LEDTHCLLCNL 371
Y ++ +L+ + I ++ S+ ++ Q LQ +D ED ++
Sbjct: 387 TYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQ---------LDSPEDAEFIVAKA 437
Query: 372 IHDGQLKGYISLAHQK 387
I DG ++ S+ H+K
Sbjct: 438 IRDGVIEA--SINHEK 451
>sp|P25161|PSMD3_DROME Probable 26S proteasome non-ATPase regulatory subunit 3
OS=Drosophila melanogaster GN=Rpn3 PE=2 SV=1
Length = 494
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 199 IESSQYKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSSKKN-KRLILI 257
++ S Y + +S ++ + YY+GR +Y A+++L A ++ + + ++ +
Sbjct: 232 VKKSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHKHLVQALRKSPQHAAIGFRQTVQK 291
Query: 258 YLVPVKMLLGFMPTRELLDKYDLLQ----LWDVTVAVKGGQINQLSDAMTKHQTFF 309
++ V++LLG +P R + + L Q + +T AV+ G + + D ++++ F
Sbjct: 292 LIIVVELLLGNIPERVVFRQAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQYGPKF 347
>sp|A8E283|VPN7_BPPHE Tail fiber protein OS=Enterococcus phage phiEF24C GN=EFP_031 PE=1
SV=1
Length = 1825
Score = 32.3 bits (72), Expect = 6.0, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 23/165 (13%)
Query: 106 VQTVSLNLRLVSNKVDNKALASSIQD--GNSGAKPRDALETTTEMLMTCFRIC---TSDN 160
+ +S + +V+ KV++K + +QD +S DA++ E ++ +SDN
Sbjct: 361 ISELSTEITIVAGKVESKVTKTEVQDMIDSSFVDMSDAIKKAQEDADKANKVIADMSSDN 420
Query: 161 RTSENDS----KKWGML----PFVNQLFKVYFRISKLHLMK---------PLIRAIESSQ 203
R + ++ K+W ++ P + + Y SK + K P++ +ES+
Sbjct: 421 RLTPSEKIDLLKEWDIIKNEYPSYLEQAETYEVDSKDYTAKYNSLELFVTPILADMESTS 480
Query: 204 YKDKSSLSQQITYKYYVGRKAMFDSDYKTANEYLTFAFQRCHKSS 248
D ++L + YY R A+ +S K + +T A ++ ++S
Sbjct: 481 SVDGATLRKTFN-SYYTARIALLNSISKKLKDGITEAMKKASQAS 524
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,939,026
Number of Sequences: 539616
Number of extensions: 5470071
Number of successful extensions: 12210
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 12122
Number of HSP's gapped (non-prelim): 42
length of query: 406
length of database: 191,569,459
effective HSP length: 120
effective length of query: 286
effective length of database: 126,815,539
effective search space: 36269244154
effective search space used: 36269244154
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)