Query psy9769
Match_columns 1026
No_of_seqs 692 out of 4785
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 19:06:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 9.4E-42 3.2E-46 370.4 16.2 252 42-293 9-270 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 4E-41 1.4E-45 360.8 8.7 245 41-285 7-255 (256)
3 2xn4_A Kelch-like protein 2; s 100.0 1.3E-37 4.3E-42 344.3 36.0 284 307-868 3-300 (302)
4 1zgk_A Kelch-like ECH-associat 100.0 2.8E-36 9.4E-41 334.4 35.2 275 313-865 18-307 (308)
5 3ii7_A Kelch-like protein 7; p 100.0 4.3E-36 1.5E-40 332.7 34.5 269 319-867 11-294 (306)
6 2vpj_A Kelch-like protein 12; 100.0 1.1E-35 3.9E-40 328.4 34.2 280 307-866 4-299 (301)
7 4asc_A Kelch repeat and BTB do 100.0 1E-33 3.5E-38 314.9 27.6 161 319-486 4-187 (315)
8 2woz_A Kelch repeat and BTB do 100.0 3.2E-33 1.1E-37 311.2 31.1 169 311-486 7-197 (318)
9 2uvk_A YJHT; unknown function, 100.0 1.2E-31 4.2E-36 303.8 29.0 178 303-484 4-239 (357)
10 2xn4_A Kelch-like protein 2; s 100.0 8.9E-31 3E-35 289.3 30.3 188 297-485 40-241 (302)
11 3ii7_A Kelch-like protein 7; p 100.0 9.6E-31 3.3E-35 289.6 28.7 189 297-486 34-238 (306)
12 1zgk_A Kelch-like ECH-associat 100.0 2.7E-30 9.2E-35 286.2 29.9 261 350-888 9-283 (308)
13 4asc_A Kelch repeat and BTB do 100.0 3.5E-30 1.2E-34 286.3 24.2 170 317-486 43-234 (315)
14 2uvk_A YJHT; unknown function, 100.0 1.8E-29 6.3E-34 285.9 30.4 137 348-484 2-188 (357)
15 2woz_A Kelch repeat and BTB do 100.0 2.1E-29 7E-34 280.5 25.9 171 316-486 53-244 (318)
16 2vpj_A Kelch-like protein 12; 100.0 2E-28 7E-33 270.2 32.6 248 363-888 12-274 (301)
17 2zwa_A Leucine carboxyl methyl 100.0 9.5E-30 3.2E-34 311.3 19.1 220 235-463 315-559 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.2E-27 4.1E-32 292.9 21.9 173 304-477 181-382 (656)
19 3htm_A Speckle-type POZ protei 99.9 1.8E-26 6.1E-31 231.4 13.6 154 48-201 17-171 (172)
20 3hqi_A Speckle-type POZ protei 99.9 1.1E-23 3.7E-28 232.5 14.3 154 48-201 157-311 (312)
21 4eoz_A Speckle-type POZ protei 99.9 3E-24 1E-28 208.5 7.8 136 48-183 8-144 (145)
22 1k3i_A Galactose oxidase precu 99.9 1.6E-22 5.6E-27 247.4 20.2 139 335-479 167-329 (656)
23 2z8h_A Transcription regulator 99.9 9.1E-23 3.1E-27 195.3 13.2 127 39-167 10-138 (138)
24 1r29_A B-cell lymphoma 6 prote 99.9 1.3E-22 4.4E-27 191.5 12.3 120 41-161 5-126 (127)
25 2ppi_A Gigaxonin; BTB domain, 99.9 8.9E-23 3E-27 196.3 10.9 124 36-159 18-144 (144)
26 2if5_A Zinc finger and BTB dom 99.9 1.4E-22 4.6E-27 189.4 11.6 117 43-159 3-120 (120)
27 3go5_A Multidomain protein wit 99.9 5.3E-22 1.8E-26 209.7 16.4 136 872-1017 67-213 (285)
28 2zwa_A Leucine carboxyl methyl 99.9 6.3E-22 2.2E-26 242.1 19.4 179 305-484 436-645 (695)
29 3b84_A Zinc finger and BTB dom 99.9 1.8E-22 6.1E-27 187.8 8.8 113 45-161 4-117 (119)
30 2yy9_A Zinc finger and BTB dom 99.9 2.4E-22 8.2E-27 191.3 9.6 117 44-164 4-121 (135)
31 3ohu_A Transcription regulator 99.9 1.7E-22 5.7E-27 190.2 8.4 116 41-158 8-125 (125)
32 1buo_A POZ domain, protein (pr 99.9 9.1E-22 3.1E-26 183.7 11.5 116 42-161 5-120 (121)
33 2vpk_A Myoneurin; transcriptio 99.9 7E-22 2.4E-26 183.2 9.5 112 46-160 3-116 (116)
34 2ihc_A Transcription regulator 99.9 6.3E-22 2.1E-26 185.6 9.2 116 42-159 6-123 (124)
35 3ga1_A Nucleus accumbens-assoc 99.8 1.8E-21 6.2E-26 184.0 9.0 115 43-161 11-127 (129)
36 2q81_A MIZ-1 protein; BTB/POZ 99.8 8.6E-22 2.9E-26 183.2 6.3 113 43-159 5-117 (119)
37 2vkp_A BTB/POZ domain-containi 99.8 2.6E-21 9E-26 177.3 8.2 103 59-162 2-109 (109)
38 3fkc_A Transcriptional regulat 99.8 7.5E-20 2.6E-24 168.8 11.4 109 40-152 6-115 (116)
39 3m5b_A Zinc finger and BTB dom 99.8 5.8E-20 2E-24 169.9 10.4 106 45-160 12-117 (119)
40 3go5_A Multidomain protein wit 99.7 4.5E-17 1.5E-21 172.1 15.3 200 563-934 5-217 (285)
41 2eqx_A Kelch repeat and BTB do 99.6 7.2E-16 2.5E-20 138.6 6.2 96 158-256 4-99 (105)
42 2khj_A 30S ribosomal protein S 99.5 9.1E-15 3.1E-19 132.2 6.5 86 927-1014 10-96 (109)
43 2khi_A 30S ribosomal protein S 99.5 1.2E-13 4E-18 126.0 9.2 84 929-1014 11-96 (115)
44 1luz_A Protein K3, protein K2; 99.4 5.5E-14 1.9E-18 120.6 5.2 73 943-1017 5-80 (88)
45 2eqs_A ATP-dependent RNA helic 99.4 4.5E-13 1.5E-17 119.4 9.4 73 943-1015 6-82 (103)
46 2k4k_A GSP13, general stress p 99.4 5.3E-13 1.8E-17 124.2 9.5 69 946-1014 4-72 (130)
47 1kl9_A Eukaryotic translation 99.4 3.8E-13 1.3E-17 131.8 7.9 68 948-1015 14-83 (182)
48 2k52_A Uncharacterized protein 99.4 6.6E-13 2.2E-17 112.5 8.1 66 946-1015 2-67 (80)
49 2a19_A EIF-2- alpha, eukaryoti 99.4 9.6E-13 3.3E-17 128.4 8.5 67 949-1015 15-83 (175)
50 2cqo_A Nucleolar protein of 40 99.4 1.2E-12 4E-17 119.6 8.0 65 946-1010 19-84 (119)
51 1kl9_A Eukaryotic translation 99.3 2.4E-15 8.2E-20 147.3 -14.8 113 872-989 13-143 (182)
52 2ast_A S-phase kinase-associat 99.3 5.4E-12 1.8E-16 122.6 8.1 104 68-172 3-136 (159)
53 1q8k_A Eukaryotic translation 99.2 4E-11 1.4E-15 127.1 8.5 68 948-1015 12-81 (308)
54 1wi5_A RRP5 protein homolog; S 99.1 3.4E-11 1.2E-15 110.6 6.1 80 941-1020 13-96 (119)
55 3aev_A Translation initiation 99.1 8.4E-11 2.9E-15 123.2 9.2 66 949-1014 11-78 (275)
56 4ajy_C Transcription elongatio 99.0 5E-10 1.7E-14 98.6 7.3 79 68-147 4-97 (97)
57 1wi5_A RRP5 protein homolog; S 99.0 3.1E-10 1.1E-14 104.2 5.8 102 546-649 3-117 (119)
58 3psi_A Transcription elongatio 99.0 4.7E-10 1.6E-14 139.2 8.5 73 942-1014 895-968 (1219)
59 3cw2_C Translation initiation 99.0 2.1E-10 7.3E-15 120.0 4.6 70 946-1015 8-79 (266)
60 1go3_E DNA-directed RNA polyme 98.9 2.5E-09 8.5E-14 107.1 9.6 70 948-1018 80-167 (187)
61 1fs1_B SKP1, cyclin A/CDK2-ass 98.9 1.7E-09 5.8E-14 102.3 7.3 101 68-172 4-131 (141)
62 3cdi_A Polynucleotide phosphor 98.9 1.5E-10 5.3E-15 137.1 0.0 69 946-1015 624-692 (723)
63 3bzc_A TEX; helix-turn-helix, 98.9 4.8E-10 1.6E-14 133.6 3.6 74 941-1014 646-719 (785)
64 4aid_A Polyribonucleotide nucl 98.9 2.5E-10 8.5E-15 134.4 0.0 69 946-1015 634-702 (726)
65 3psf_A Transcription elongatio 98.9 2.9E-10 9.9E-15 138.9 0.2 73 943-1015 899-972 (1030)
66 2nn6_I 3'-5' exoribonuclease C 98.8 4.1E-09 1.4E-13 106.0 8.2 75 947-1021 79-165 (209)
67 3m7n_A Putative uncharacterize 98.8 4.2E-09 1.4E-13 103.7 7.3 70 950-1022 58-137 (179)
68 1y14_B B16, RPB7, DNA-directed 98.8 7.2E-09 2.5E-13 101.7 8.5 63 948-1011 82-154 (171)
69 2p1m_A SKP1-like protein 1A; F 98.8 8.7E-10 3E-14 106.7 1.2 105 68-175 6-141 (160)
70 2b8k_G B16, DNA-directed RNA p 98.8 9.4E-09 3.2E-13 103.5 8.3 63 948-1011 82-154 (215)
71 4ayb_E DNA-directed RNA polyme 98.7 2.5E-08 8.5E-13 99.0 9.4 62 948-1010 80-152 (180)
72 1e3p_A Guanosine pentaphosphat 98.7 6.9E-10 2.4E-14 132.0 -3.2 69 946-1015 664-736 (757)
73 2c35_B Human RPB7, DNA-directe 98.7 3.6E-08 1.2E-12 97.0 8.3 63 948-1011 80-154 (172)
74 2je6_I RRP4, exosome complex R 98.6 5E-08 1.7E-12 101.0 7.7 75 948-1022 73-151 (251)
75 2khj_A 30S ribosomal protein S 98.6 3.7E-08 1.3E-12 88.7 5.7 83 633-718 17-103 (109)
76 3h0g_G DNA-directed RNA polyme 98.6 2.9E-08 1E-12 97.2 4.8 64 948-1012 83-156 (172)
77 2k52_A Uncharacterized protein 98.6 5.6E-08 1.9E-12 82.0 5.8 71 645-718 3-73 (80)
78 1hh2_P NUSA, N utilization sub 98.6 1.3E-07 4.3E-12 101.4 9.4 96 913-1016 85-198 (344)
79 2khi_A 30S ribosomal protein S 98.6 6.6E-08 2.3E-12 87.8 6.1 88 636-731 19-111 (115)
80 2a19_A EIF-2- alpha, eukaryoti 98.5 4.6E-09 1.6E-13 102.4 -1.9 101 646-754 14-120 (175)
81 2bh8_A 1B11; transcription, mo 98.5 1.3E-07 4.4E-12 83.3 6.6 84 874-987 13-99 (101)
82 2z0s_A Probable exosome comple 98.5 1.1E-07 3.8E-12 97.9 6.8 74 948-1021 65-143 (235)
83 1luz_A Protein K3, protein K2; 98.5 1.1E-07 3.8E-12 81.3 5.4 74 641-718 5-84 (88)
84 2ba0_A Archeal exosome RNA bin 98.5 2.3E-07 7.9E-12 94.9 8.7 74 948-1021 56-131 (229)
85 1q8k_A Eukaryotic translation 98.4 2.7E-08 9.2E-13 105.5 -0.8 104 645-756 11-120 (308)
86 2k4k_A GSP13, general stress p 98.4 3.3E-07 1.1E-11 85.0 5.6 75 643-720 3-81 (130)
87 2cqo_A Nucleolar protein of 40 98.2 7.8E-07 2.7E-11 80.9 5.2 80 637-718 12-97 (119)
88 1hv2_A Elongin C, ELC1; protei 98.2 2.1E-06 7.3E-11 75.2 7.7 79 67-147 5-99 (99)
89 2ckz_B C25, DNA-directed RNA p 98.2 1.8E-06 6.2E-11 87.2 7.9 66 948-1013 80-159 (218)
90 2eqs_A ATP-dependent RNA helic 98.2 1.8E-06 6.2E-11 76.5 6.5 75 640-718 5-86 (103)
91 3ayh_B DNA-directed RNA polyme 98.2 2.4E-06 8.3E-11 85.8 8.1 64 948-1012 80-162 (203)
92 2fnj_C Transcription elongatio 98.2 1.8E-06 6.1E-11 75.3 5.9 79 68-147 3-96 (96)
93 3aev_A Translation initiation 98.1 1.5E-07 5.2E-12 98.5 -2.1 101 646-754 10-116 (275)
94 3v7d_A Suppressor of kinetocho 98.1 5.8E-06 2E-10 80.3 8.1 99 67-166 8-137 (169)
95 1k0r_A NUSA; two component arr 98.0 8.8E-06 3E-10 87.2 7.6 69 941-1016 123-202 (366)
96 3drz_A BTB/POZ domain-containi 98.0 1.6E-05 5.6E-10 70.8 8.3 92 68-160 8-106 (107)
97 2id0_A Exoribonuclease 2; RNAs 98.0 8E-06 2.7E-10 97.2 7.9 69 945-1014 554-638 (644)
98 1e3p_A Guanosine pentaphosphat 97.9 3.6E-06 1.2E-10 100.3 2.3 83 643-734 663-753 (757)
99 2bx2_L Ribonuclease E, RNAse E 97.8 2.7E-05 9.1E-10 88.2 8.8 68 948-1015 44-124 (517)
100 2asb_A Transcription elongatio 97.8 2.8E-05 9.5E-10 78.6 7.2 63 948-1016 6-79 (251)
101 3cw2_C Translation initiation 97.8 1.4E-05 4.9E-10 83.5 5.2 93 644-743 8-105 (266)
102 3psi_A Transcription elongatio 97.7 3E-05 1E-09 96.7 6.4 79 640-721 895-978 (1219)
103 1vcb_B Protein (elongin C); tu 97.7 4.8E-05 1.6E-09 68.0 5.9 80 67-147 18-112 (112)
104 2nn6_H Exosome complex exonucl 97.6 3.2E-05 1.1E-09 81.9 4.4 76 948-1023 94-180 (308)
105 1hh2_P NUSA, N utilization sub 97.6 3.6E-05 1.2E-09 82.5 4.5 112 596-717 85-200 (344)
106 2ja9_A Exosome complex exonucl 97.6 0.00014 4.8E-09 70.4 8.1 67 948-1015 6-74 (175)
107 3bzc_A TEX; helix-turn-helix, 97.5 4.1E-05 1.4E-09 91.5 4.5 76 639-717 646-725 (785)
108 2wp8_J Exosome complex exonucl 97.5 9.7E-05 3.3E-09 91.2 7.1 60 950-1009 887-964 (977)
109 3cdi_A Polynucleotide phosphor 97.4 2.3E-05 7.8E-10 93.2 0.0 74 642-719 622-699 (723)
110 2vnu_D Exosome complex exonucl 97.4 0.00015 5E-09 88.0 7.0 60 951-1010 671-748 (760)
111 3psf_A Transcription elongatio 97.4 2.4E-05 8.1E-10 96.0 -0.0 78 640-720 898-980 (1030)
112 1go3_E DNA-directed RNA polyme 97.4 0.00013 4.3E-09 72.7 4.9 70 645-718 79-168 (187)
113 2nn6_I 3'-5' exoribonuclease C 97.3 0.00017 5.6E-09 72.5 5.2 73 644-718 78-163 (209)
114 4ayb_E DNA-directed RNA polyme 97.3 0.00018 6E-09 71.1 4.6 70 645-718 79-167 (180)
115 4aid_A Polyribonucleotide nucl 97.2 6.1E-05 2.1E-09 89.0 0.0 75 641-719 631-709 (726)
116 3drx_A BTB/POZ domain-containi 97.0 0.00093 3.2E-08 65.5 7.1 92 68-160 14-112 (202)
117 3mbr_X Glutamine cyclotransfer 96.9 0.028 9.5E-07 57.7 16.8 146 319-474 30-180 (243)
118 2c35_B Human RPB7, DNA-directe 96.8 0.00082 2.8E-08 65.7 4.2 67 646-717 80-165 (172)
119 3m7n_A Putative uncharacterize 96.8 0.00073 2.5E-08 66.2 3.7 65 645-718 56-134 (179)
120 3h0g_G DNA-directed RNA polyme 96.7 0.00071 2.4E-08 65.9 3.5 67 646-717 83-166 (172)
121 2asb_A Transcription elongatio 96.6 0.0027 9.2E-08 64.2 6.4 69 563-631 6-86 (251)
122 2b8k_G B16, DNA-directed RNA p 96.6 0.0012 4.2E-08 66.2 3.8 68 646-718 82-166 (215)
123 3mbr_X Glutamine cyclotransfer 96.5 0.02 6.7E-07 58.8 12.7 120 347-473 10-133 (243)
124 1y14_B B16, RPB7, DNA-directed 96.5 0.0015 5.2E-08 63.6 4.2 60 646-709 82-155 (171)
125 2bh8_A 1B11; transcription, mo 96.5 0.0056 1.9E-07 53.5 7.3 66 948-1016 12-81 (101)
126 3dsm_A Uncharacterized protein 96.4 0.28 9.6E-06 53.2 22.0 137 333-477 16-165 (328)
127 3kvt_A Potassium channel prote 96.4 0.0046 1.6E-07 55.4 6.1 83 68-151 7-93 (115)
128 2nn6_G Exosome complex exonucl 96.4 0.0072 2.5E-07 63.3 8.3 67 948-1015 126-193 (289)
129 2je6_I RRP4, exosome complex R 96.3 0.0021 7.1E-08 66.4 4.1 70 644-717 71-147 (251)
130 2ba0_A Archeal exosome RNA bin 96.3 0.0031 1.1E-07 64.3 5.3 69 645-717 55-128 (229)
131 3nol_A Glutamine cyclotransfer 96.3 0.067 2.3E-06 55.3 14.8 147 319-475 52-203 (262)
132 1k0r_A NUSA; two component arr 96.2 0.0054 1.9E-07 65.8 6.4 67 563-629 129-207 (366)
133 2z0s_A Probable exosome comple 96.2 0.0031 1.1E-07 64.7 4.2 70 644-717 63-140 (235)
134 3nok_A Glutaminyl cyclase; bet 96.1 0.052 1.8E-06 56.2 13.1 142 319-473 64-210 (268)
135 3nol_A Glutamine cyclotransfer 96.1 0.039 1.4E-06 57.1 12.1 121 346-473 31-155 (262)
136 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.25 8.6E-06 54.6 18.8 155 314-483 48-219 (376)
137 1s1g_A Potassium voltage-gated 95.8 0.02 6.8E-07 51.9 7.3 83 68-154 15-104 (124)
138 3nok_A Glutaminyl cyclase; bet 95.7 0.043 1.5E-06 56.8 10.5 107 359-473 58-164 (268)
139 3q7m_A Lipoprotein YFGL, BAMB; 95.5 0.56 1.9E-05 51.7 19.8 146 317-479 141-304 (376)
140 3dsm_A Uncharacterized protein 95.5 0.33 1.1E-05 52.6 17.4 148 318-474 93-254 (328)
141 2nz0_B Potassium voltage-gated 95.4 0.025 8.6E-07 52.4 6.6 80 67-150 36-121 (140)
142 2iwa_A Glutamine cyclotransfer 95.3 0.66 2.3E-05 48.3 18.1 144 320-473 32-181 (266)
143 1nn7_A Potassium channel KV4.2 95.2 0.017 5.9E-07 50.7 4.7 79 68-150 2-86 (105)
144 1t1d_A Protein (potassium chan 95.2 0.029 9.8E-07 48.7 5.9 83 68-151 3-90 (100)
145 2iwa_A Glutamine cyclotransfer 95.0 0.19 6.7E-06 52.4 12.9 120 347-473 10-135 (266)
146 1l0q_A Surface layer protein; 94.3 0.42 1.4E-05 52.9 14.4 141 320-475 2-149 (391)
147 2id0_A Exoribonuclease 2; RNAs 93.7 0.041 1.4E-06 65.3 4.6 69 646-716 557-643 (644)
148 1l0q_A Surface layer protein; 93.4 0.81 2.8E-05 50.5 14.6 141 319-474 85-234 (391)
149 3jrp_A Fusion protein of prote 93.3 0.83 2.8E-05 49.8 14.4 105 320-433 23-135 (379)
150 3bws_A Protein LP49; two-domai 93.1 2.9 0.0001 46.6 19.0 135 335-475 102-245 (433)
151 2z2n_A Virginiamycin B lyase; 92.7 2.5 8.6E-05 44.1 16.7 140 319-473 151-295 (299)
152 1gxr_A ESG1, transducin-like e 92.7 1.9 6.5E-05 45.9 15.9 141 320-473 109-255 (337)
153 1q7f_A NHL, brain tumor CG1071 92.5 5.7 0.00019 41.3 19.2 140 319-467 131-274 (286)
154 1q7f_A NHL, brain tumor CG1071 92.5 7.5 0.00026 40.3 20.1 145 319-472 88-237 (286)
155 1rwi_B Serine/threonine-protei 91.9 1.4 4.9E-05 45.4 13.3 142 319-473 34-180 (270)
156 2z2n_A Virginiamycin B lyase; 91.9 3.4 0.00012 43.0 16.5 139 319-471 109-253 (299)
157 1k8k_C P40, ARP2/3 complex 41 91.5 0.81 2.8E-05 49.8 11.3 107 319-434 19-129 (372)
158 3vgz_A Uncharacterized protein 91.5 2.9 9.8E-05 44.9 15.7 148 319-473 52-215 (353)
159 3ayh_B DNA-directed RNA polyme 91.4 0.15 5.1E-06 50.8 4.5 59 646-708 80-161 (203)
160 3vgz_A Uncharacterized protein 91.3 7.3 0.00025 41.6 18.8 145 319-476 152-306 (353)
161 3jro_A Fusion protein of prote 91.1 1.8 6.2E-05 52.9 14.9 105 320-433 21-133 (753)
162 2xbg_A YCF48-like protein; pho 90.9 2.8 9.7E-05 45.1 14.6 149 319-481 132-287 (327)
163 3d0f_A Penicillin-binding 1 tr 90.7 0.58 2E-05 41.1 7.2 54 950-1003 34-93 (106)
164 1rwi_B Serine/threonine-protei 90.7 2.9 9.8E-05 43.0 14.1 141 319-472 77-221 (270)
165 3h8z_A FragIle X mental retard 90.5 0.49 1.7E-05 42.6 6.5 54 950-1003 15-70 (128)
166 3bws_A Protein LP49; two-domai 90.4 6.1 0.00021 43.9 17.6 110 319-438 133-249 (433)
167 2qc5_A Streptogramin B lactona 90.3 13 0.00045 38.3 19.3 145 319-478 30-180 (300)
168 3jrp_A Fusion protein of prote 90.2 1.4 4.6E-05 48.0 11.6 136 320-464 69-230 (379)
169 2eqx_A Kelch repeat and BTB do 90.2 0.26 8.8E-06 43.3 4.4 36 127-162 5-40 (105)
170 2qc5_A Streptogramin B lactona 90.2 8.3 0.00029 39.9 17.5 144 319-477 72-221 (300)
171 3odt_A Protein DOA1; ubiquitin 89.8 2.8 9.6E-05 44.0 13.3 144 321-479 156-302 (313)
172 2rf4_A DNA-directed RNA polyme 89.6 0.67 2.3E-05 46.4 7.5 67 948-1014 128-206 (214)
173 3dwl_C Actin-related protein 2 89.6 0.42 1.4E-05 52.5 6.8 137 319-464 22-167 (377)
174 3v7d_B Cell division control p 89.3 3.8 0.00013 46.2 14.8 140 321-473 281-421 (464)
175 1k8k_C P40, ARP2/3 complex 41 89.2 5 0.00017 43.3 15.2 115 365-484 153-287 (372)
176 1yiq_A Quinohemoprotein alcoho 89.2 10 0.00035 45.5 19.0 119 314-438 65-200 (689)
177 1kv9_A Type II quinohemoprotei 89.0 9.8 0.00033 45.5 18.6 119 314-438 61-195 (668)
178 2ja9_A Exosome complex exonucl 88.9 0.33 1.1E-05 46.8 4.3 53 562-614 5-68 (175)
179 2dg1_A DRP35, lactonase; beta 88.8 2.7 9.3E-05 44.9 12.5 146 319-471 55-211 (333)
180 2nn6_H Exosome complex exonucl 88.8 0.29 1E-05 51.7 4.3 70 644-717 92-175 (308)
181 2pbi_B Guanine nucleotide-bind 88.7 4.4 0.00015 44.0 14.2 104 320-434 210-317 (354)
182 1got_B GT-beta; complex (GTP-b 88.6 4.1 0.00014 43.8 13.8 105 319-434 195-303 (340)
183 3fm0_A Protein CIAO1; WDR39,SG 88.5 6.3 0.00022 42.5 15.3 156 319-483 27-191 (345)
184 2ad6_A Methanol dehydrogenase 88.5 3.9 0.00013 48.0 14.3 116 359-480 56-194 (571)
185 4ery_A WD repeat-containing pr 88.5 4.9 0.00017 42.4 14.1 105 319-436 76-184 (312)
186 2ad6_A Methanol dehydrogenase 88.4 9.6 0.00033 44.5 17.7 121 313-438 56-193 (571)
187 1got_B GT-beta; complex (GTP-b 88.4 5.8 0.0002 42.6 14.8 123 334-465 164-292 (340)
188 2vnu_D Exosome complex exonucl 88.2 0.2 6.9E-06 60.6 3.0 66 649-716 671-760 (760)
189 2pm7_B Protein transport prote 88.1 5.6 0.00019 41.8 14.2 105 320-433 21-133 (297)
190 3no2_A Uncharacterized protein 88.1 5.4 0.00019 41.6 13.9 137 334-479 99-260 (276)
191 2hz6_A Endoplasmic reticulum t 88.0 0.3 1E-05 54.0 4.1 141 318-479 8-157 (369)
192 3fvz_A Peptidyl-glycine alpha- 88.0 22 0.00074 37.8 19.1 139 334-476 69-230 (329)
193 3fm0_A Protein CIAO1; WDR39,SG 87.9 2.8 9.5E-05 45.4 11.8 137 319-464 72-215 (345)
194 2bx2_L Ribonuclease E, RNAse E 87.9 0.4 1.4E-05 54.4 4.8 70 645-717 43-127 (517)
195 2ckz_B C25, DNA-directed RNA p 87.8 0.27 9.3E-06 49.3 3.2 61 646-709 80-158 (218)
196 3ow8_A WD repeat-containing pr 87.8 4 0.00014 43.6 13.0 104 319-435 175-282 (321)
197 2r7d_A Ribonuclease II family 87.5 0.62 2.1E-05 52.8 6.2 56 947-1014 401-456 (469)
198 3ow8_A WD repeat-containing pr 87.4 5.1 0.00017 42.8 13.5 106 319-436 133-241 (321)
199 3bg1_A Protein SEC13 homolog; 87.4 2.3 7.9E-05 45.4 10.7 110 320-438 25-143 (316)
200 1ri6_A Putative isomerase YBHE 87.2 9.1 0.00031 40.5 15.5 157 319-484 140-321 (343)
201 1w6s_A Methanol dehydrogenase 87.1 8 0.00027 45.4 15.8 122 313-439 56-200 (599)
202 4ery_A WD repeat-containing pr 87.0 3.6 0.00012 43.4 11.9 103 320-435 35-141 (312)
203 3v7d_B Cell division control p 86.9 8.7 0.0003 43.1 15.8 131 321-464 323-453 (464)
204 2pbi_B Guanine nucleotide-bind 86.9 7.3 0.00025 42.2 14.6 128 334-470 176-312 (354)
205 1vyh_C Platelet-activating fac 86.9 3.3 0.00011 46.1 12.0 103 320-435 120-226 (410)
206 2ovr_B FBW7, F-BOX/WD repeat p 86.4 4.3 0.00015 45.5 12.8 130 335-473 260-391 (445)
207 3ei3_B DNA damage-binding prot 86.4 17 0.00059 39.3 17.5 140 321-472 87-235 (383)
208 2aq5_A Coronin-1A; WD40 repeat 86.4 12 0.0004 41.1 16.2 148 321-474 145-300 (402)
209 1gxr_A ESG1, transducin-like e 86.3 8.4 0.00029 40.6 14.5 140 320-473 153-296 (337)
210 2hes_X YDR267CP; beta-propelle 86.3 12 0.00041 39.9 15.8 154 320-482 119-289 (330)
211 1p22_A F-BOX/WD-repeat protein 86.2 2.2 7.5E-05 47.9 10.1 141 319-472 182-324 (435)
212 4e54_B DNA damage-binding prot 86.1 1.7 6E-05 48.8 9.2 105 320-433 132-241 (435)
213 1p22_A F-BOX/WD-repeat protein 85.7 8.1 0.00028 43.1 14.6 103 319-434 142-244 (435)
214 2wp8_J Exosome complex exonucl 85.7 0.38 1.3E-05 59.5 3.5 67 648-716 887-977 (977)
215 3mmy_A MRNA export factor; mRN 85.6 6.8 0.00023 42.0 13.5 140 320-472 54-198 (368)
216 1jmx_B Amine dehydrogenase; ox 85.4 3.7 0.00013 43.9 11.1 150 318-473 9-175 (349)
217 2ovr_B FBW7, F-BOX/WD repeat p 85.3 9.6 0.00033 42.6 15.0 107 319-436 288-395 (445)
218 3u4y_A Uncharacterized protein 85.3 3.6 0.00012 43.8 10.9 132 319-463 9-148 (331)
219 1jjg_A M156R; beta barrel, S1 85.3 5 0.00017 32.8 8.5 65 943-1010 26-94 (102)
220 2xbg_A YCF48-like protein; pho 84.9 18 0.0006 38.7 16.2 131 343-481 24-159 (327)
221 2vdu_B TRNA (guanine-N(7)-)-me 84.8 12 0.00042 41.8 15.6 133 320-463 210-373 (450)
222 3v9f_A Two-component system se 84.7 3.8 0.00013 50.2 11.9 137 335-480 384-531 (781)
223 4a2l_A BT_4663, two-component 84.6 20 0.00069 43.7 18.5 149 319-481 98-252 (795)
224 3vl1_A 26S proteasome regulato 84.5 17 0.00057 39.9 16.4 104 319-432 258-365 (420)
225 3f3f_A Nucleoporin SEH1; struc 84.1 32 0.0011 35.9 17.9 106 320-434 23-145 (351)
226 1kb0_A Quinohemoprotein alcoho 84.0 7.5 0.00026 46.6 13.8 121 313-439 71-208 (677)
227 2hes_X YDR267CP; beta-propelle 83.9 2.6 8.8E-05 45.3 8.9 140 320-468 165-322 (330)
228 2aq5_A Coronin-1A; WD40 repeat 83.7 8.4 0.00029 42.4 13.3 134 319-461 93-238 (402)
229 3b7f_A Glycosyl hydrolase, BNR 83.7 18 0.00061 39.8 16.0 153 319-484 128-334 (394)
230 1npe_A Nidogen, entactin; glyc 83.4 41 0.0014 34.2 17.8 143 319-475 90-240 (267)
231 4gqb_B Methylosome protein 50; 83.1 7.2 0.00025 42.1 12.2 126 334-466 103-238 (344)
232 3no2_A Uncharacterized protein 83.0 5.9 0.0002 41.3 11.0 144 318-479 46-203 (276)
233 3zwl_B Eukaryotic translation 82.8 10 0.00034 40.6 13.3 107 319-433 43-152 (369)
234 2ojh_A Uncharacterized protein 82.7 12 0.00043 38.1 13.6 114 319-440 95-214 (297)
235 2dg1_A DRP35, lactonase; beta 82.6 6.3 0.00022 42.0 11.4 96 365-462 55-153 (333)
236 3b7f_A Glycosyl hydrolase, BNR 82.4 11 0.00039 41.4 13.7 150 319-481 22-216 (394)
237 2vdu_B TRNA (guanine-N(7)-)-me 82.2 34 0.0012 38.1 17.9 107 319-436 160-275 (450)
238 4g56_B MGC81050 protein; prote 82.1 5.7 0.0002 43.1 10.9 105 319-434 150-260 (357)
239 3i3n_A Kelch-like protein 11; 82.0 0.98 3.4E-05 47.6 4.3 91 129-220 138-250 (279)
240 1ri6_A Putative isomerase YBHE 81.9 6.8 0.00023 41.5 11.4 150 319-477 4-165 (343)
241 3ott_A Two-component system se 81.8 19 0.00066 43.6 16.6 138 319-472 482-625 (758)
242 4aez_A CDC20, WD repeat-contai 81.6 6.6 0.00023 43.3 11.4 135 319-465 228-371 (401)
243 2ynn_A Coatomer subunit beta'; 81.2 8.5 0.00029 40.5 11.6 103 320-433 25-129 (304)
244 3jro_A Fusion protein of prote 81.2 6.4 0.00022 47.9 12.0 143 320-471 67-236 (753)
245 1kb0_A Quinohemoprotein alcoho 81.2 10 0.00034 45.5 13.4 115 359-480 71-208 (677)
246 4a2l_A BT_4663, two-component 81.0 27 0.00091 42.6 17.6 150 319-482 141-300 (795)
247 4gqb_B Methylosome protein 50; 81.0 9.6 0.00033 41.1 12.1 105 319-434 138-248 (344)
248 3vl1_A 26S proteasome regulato 81.0 28 0.00095 38.1 16.4 98 365-468 258-359 (420)
249 1pjx_A Dfpase, DIISOPROPYLFLUO 80.9 22 0.00075 37.0 14.9 140 320-474 83-257 (314)
250 2hqs_A Protein TOLB; TOLB, PAL 80.7 18 0.00062 40.1 14.7 99 334-439 203-307 (415)
251 1erj_A Transcriptional repress 80.5 7.4 0.00025 42.8 11.3 105 319-435 134-241 (393)
252 1r5m_A SIR4-interacting protei 80.5 7.4 0.00025 42.7 11.4 101 322-435 219-322 (425)
253 1yfq_A Cell cycle arrest prote 80.3 17 0.00057 38.4 13.8 141 321-472 24-178 (342)
254 1pgu_A Actin interacting prote 80.2 24 0.00083 40.9 16.3 92 334-433 467-573 (615)
255 3fvz_A Peptidyl-glycine alpha- 80.1 63 0.0022 34.0 20.9 148 319-469 154-318 (329)
256 1r5m_A SIR4-interacting protei 80.0 10 0.00034 41.6 12.2 105 320-434 161-280 (425)
257 4g56_B MGC81050 protein; prote 79.8 4.4 0.00015 44.1 8.9 131 321-464 195-333 (357)
258 3bg1_A Protein SEC13 homolog; 79.1 12 0.0004 39.6 12.0 112 366-484 179-305 (316)
259 3hfq_A Uncharacterized protein 79.1 11 0.00038 40.3 11.9 98 335-437 19-123 (347)
260 1pby_B Quinohemoprotein amine 79.1 16 0.00055 38.3 13.2 137 334-474 11-164 (337)
261 3zwl_B Eukaryotic translation 79.1 9.8 0.00034 40.7 11.5 107 320-434 187-306 (369)
262 3g4e_A Regucalcin; six bladed 79.1 17 0.00057 38.1 13.0 150 334-492 73-248 (297)
263 3odt_A Protein DOA1; ubiquitin 78.9 56 0.0019 33.5 17.3 64 365-435 154-217 (313)
264 1w6s_A Methanol dehydrogenase 78.6 12 0.00042 43.8 12.7 117 359-481 56-201 (599)
265 2p4o_A Hypothetical protein; p 78.6 51 0.0017 34.4 16.8 150 319-479 82-247 (306)
266 4aez_A CDC20, WD repeat-contai 78.5 16 0.00054 40.1 13.2 92 334-432 113-205 (401)
267 1kv9_A Type II quinohemoprotei 78.4 13 0.00045 44.4 13.2 114 359-479 60-195 (668)
268 1flg_A Protein (quinoprotein e 78.3 17 0.00058 42.5 13.8 113 359-478 62-200 (582)
269 2ynn_A Coatomer subunit beta'; 78.3 13 0.00044 39.0 11.9 106 320-436 153-263 (304)
270 1pgu_A Actin interacting prote 78.0 63 0.0022 37.2 19.1 141 322-473 175-328 (615)
271 2hqs_A Protein TOLB; TOLB, PAL 78.0 30 0.001 38.2 15.4 113 320-440 235-352 (415)
272 3hve_A Gigaxonin; ubiquitin, c 78.0 0.5 1.7E-05 49.2 0.4 91 130-220 131-242 (256)
273 4gga_A P55CDC, cell division c 77.9 41 0.0014 36.9 16.6 94 334-434 125-220 (420)
274 1sq9_A Antiviral protein SKI8; 77.9 15 0.00052 39.8 12.8 107 319-435 197-325 (397)
275 1vyh_C Platelet-activating fac 77.3 18 0.00062 39.9 13.3 64 320-389 204-269 (410)
276 3gre_A Serine/threonine-protei 77.2 44 0.0015 36.8 16.6 106 320-434 182-294 (437)
277 3k26_A Polycomb protein EED; W 77.2 32 0.0011 36.4 15.1 104 320-434 85-194 (366)
278 1yiq_A Quinohemoprotein alcoho 77.0 17 0.00059 43.5 13.7 114 359-479 64-200 (689)
279 2p4o_A Hypothetical protein; p 76.7 16 0.00053 38.5 12.0 121 346-472 22-146 (306)
280 2cn3_A Xyloglucanase, beta-1,4 76.3 44 0.0015 40.3 17.1 113 367-479 212-343 (737)
281 1erj_A Transcriptional repress 76.1 14 0.00048 40.5 11.8 93 365-465 134-229 (393)
282 2pm9_A Protein WEB1, protein t 76.1 21 0.00071 39.0 13.3 106 320-435 178-297 (416)
283 3scy_A Hypothetical bacterial 76.0 39 0.0013 36.1 15.3 68 319-386 61-130 (361)
284 3mkq_A Coatomer beta'-subunit; 76.0 13 0.00045 45.2 12.7 106 320-436 153-263 (814)
285 3ei3_B DNA damage-binding prot 75.9 18 0.00062 39.1 12.7 101 320-432 131-236 (383)
286 3dwl_C Actin-related protein 2 75.8 3.9 0.00013 44.4 7.1 113 365-482 22-141 (377)
287 1flg_A Protein (quinoprotein e 75.5 12 0.00042 43.7 11.5 117 314-437 63-200 (582)
288 3iz6_a 40S ribosomal protein R 75.5 19 0.00064 39.2 12.6 136 319-465 217-366 (380)
289 3e5z_A Putative gluconolactona 75.4 17 0.00058 37.8 11.8 111 320-438 40-167 (296)
290 1npe_A Nidogen, entactin; glyc 75.0 75 0.0026 32.1 17.7 144 319-472 47-197 (267)
291 3frx_A Guanine nucleotide-bind 74.9 27 0.00094 36.7 13.4 133 319-466 76-219 (319)
292 3mkq_A Coatomer beta'-subunit; 74.7 12 0.00039 45.8 11.7 104 320-433 25-129 (814)
293 3lrv_A PRE-mRNA-splicing facto 74.4 22 0.00075 37.9 12.6 104 319-434 138-246 (343)
294 3v9f_A Two-component system se 73.9 15 0.00051 44.8 12.2 135 334-479 427-574 (781)
295 1pjx_A Dfpase, DIISOPROPYLFLUO 73.8 22 0.00075 37.0 12.3 147 319-471 28-205 (314)
296 3u4y_A Uncharacterized protein 73.6 16 0.00056 38.4 11.3 102 365-475 9-119 (331)
297 4aow_A Guanine nucleotide-bind 73.6 33 0.0011 35.9 13.8 136 319-465 97-237 (340)
298 3lrv_A PRE-mRNA-splicing facto 73.4 25 0.00085 37.4 12.8 66 365-435 138-204 (343)
299 3c5m_A Oligogalacturonate lyas 73.3 29 0.00099 37.4 13.5 122 334-461 168-300 (396)
300 1yfq_A Cell cycle arrest prote 73.2 26 0.00089 36.9 12.8 103 320-432 68-179 (342)
301 3i2n_A WD repeat-containing pr 73.2 38 0.0013 35.7 14.2 105 321-436 81-203 (357)
302 4e54_B DNA damage-binding prot 73.0 8.2 0.00028 43.1 9.0 103 320-434 177-284 (435)
303 3hxj_A Pyrrolo-quinoline quino 72.1 16 0.00056 38.4 10.8 138 319-479 107-251 (330)
304 4a11_B DNA excision repair pro 71.6 5 0.00017 43.9 6.6 107 319-434 55-177 (408)
305 2k5n_A Putative cold-shock pro 71.6 11 0.00036 30.4 6.6 48 952-1006 2-52 (74)
306 3hfq_A Uncharacterized protein 71.5 25 0.00086 37.3 12.2 138 319-463 50-207 (347)
307 4aow_A Guanine nucleotide-bind 71.5 15 0.00052 38.6 10.4 103 321-435 186-289 (340)
308 3azo_A Aminopeptidase; POP fam 71.4 57 0.002 38.3 16.5 139 334-479 217-375 (662)
309 2r9r_B Paddle chimera voltage 71.2 4.7 0.00016 46.3 6.3 83 68-151 54-141 (514)
310 3i2n_A WD repeat-containing pr 70.8 71 0.0024 33.4 15.8 146 320-473 31-199 (357)
311 1sq9_A Antiviral protein SKI8; 70.7 41 0.0014 36.2 14.0 101 321-432 27-157 (397)
312 1pby_B Quinohemoprotein amine 70.6 29 0.00098 36.3 12.4 65 367-436 2-69 (337)
313 3iz6_a 40S ribosomal protein R 70.5 31 0.0011 37.4 12.8 105 321-436 171-284 (380)
314 4a11_B DNA excision repair pro 70.5 27 0.00091 37.8 12.4 102 321-433 113-219 (408)
315 2pm7_B Protein transport prote 70.4 10 0.00034 39.7 8.4 70 365-439 20-93 (297)
316 3k26_A Polycomb protein EED; W 70.1 48 0.0016 35.0 14.2 95 335-436 45-151 (366)
317 3sfz_A APAF-1, apoptotic pepti 69.6 19 0.00066 46.4 12.5 105 319-436 626-736 (1249)
318 3scy_A Hypothetical bacterial 69.6 78 0.0027 33.6 15.8 98 367-468 224-332 (361)
319 2nn6_G Exosome complex exonucl 69.5 3 0.0001 43.5 3.8 53 561-614 124-187 (289)
320 1jmx_B Amine dehydrogenase; ox 68.5 12 0.0004 39.8 8.7 69 364-437 9-79 (349)
321 4gga_A P55CDC, cell division c 68.5 24 0.00081 39.0 11.5 91 373-470 122-214 (420)
322 1nir_A Nitrite reductase; hemo 68.4 39 0.0013 39.0 13.6 155 320-484 238-418 (543)
323 3f3f_A Nucleoporin SEH1; struc 68.3 49 0.0017 34.4 13.6 137 320-465 71-240 (351)
324 2fp8_A Strictosidine synthase; 68.1 46 0.0016 35.0 13.3 131 334-470 165-310 (322)
325 2hz6_A Endoplasmic reticulum t 68.1 0.79 2.7E-05 50.6 -1.1 108 362-479 6-119 (369)
326 2ghs_A AGR_C_1268P; regucalcin 67.2 53 0.0018 34.7 13.6 139 320-470 61-207 (326)
327 2ojh_A Uncharacterized protein 67.1 36 0.0012 34.5 11.9 105 332-440 20-127 (297)
328 2xyi_A Probable histone-bindin 66.9 17 0.00058 40.4 9.9 105 320-433 141-264 (430)
329 3mmy_A MRNA export factor; mRN 66.3 27 0.00092 37.0 11.1 98 366-470 54-157 (368)
330 2rf4_A DNA-directed RNA polyme 66.3 5.9 0.0002 39.5 5.0 61 646-709 128-204 (214)
331 3e5z_A Putative gluconolactona 65.8 23 0.00077 36.8 10.0 87 366-460 40-131 (296)
332 4hcz_A PHD finger protein 1; p 65.7 12 0.00041 27.9 5.1 35 950-984 17-53 (58)
333 3hrp_A Uncharacterized protein 64.8 1.2E+02 0.0039 33.4 16.1 141 319-472 141-297 (409)
334 2eqj_A Metal-response element- 64.6 14 0.00047 28.6 5.5 34 950-983 27-62 (66)
335 3oyo_A Hemopexin fold protein 64.3 44 0.0015 33.4 11.1 98 364-472 69-197 (225)
336 2fp8_A Strictosidine synthase; 64.2 52 0.0018 34.6 12.7 136 334-473 40-216 (322)
337 1sqj_A OXG-RCBH, oligoxylogluc 63.7 1E+02 0.0036 37.3 16.6 145 336-480 145-340 (789)
338 4ggc_A P55CDC, cell division c 63.4 85 0.0029 32.2 14.2 94 334-434 45-140 (318)
339 3dr2_A Exported gluconolactona 63.4 32 0.0011 36.0 10.7 132 320-462 57-207 (305)
340 2ghs_A AGR_C_1268P; regucalcin 63.1 63 0.0022 34.1 13.1 88 365-461 60-151 (326)
341 2xzm_R RACK1; ribosome, transl 62.8 1.1E+02 0.0038 32.1 15.2 101 320-431 88-202 (343)
342 3g4e_A Regucalcin; six bladed 62.8 15 0.00052 38.4 7.9 86 365-460 24-114 (297)
343 1h95_A CSD, Y-box binding prot 62.2 29 0.001 28.2 7.6 58 950-1007 6-66 (79)
344 3ott_A Two-component system se 61.6 1.5E+02 0.0051 35.6 17.6 145 319-482 73-229 (758)
345 3a0f_A Xyloglucanase; beta-pro 61.5 95 0.0032 37.5 15.6 156 320-480 146-352 (763)
346 2xzm_R RACK1; ribosome, transl 61.5 91 0.0031 32.8 14.2 63 365-434 87-151 (343)
347 1qhu_A Protein (hemopexin); be 61.3 69 0.0024 35.8 13.1 125 319-463 158-322 (460)
348 3a0f_A Xyloglucanase; beta-pro 60.9 1.7E+02 0.0057 35.3 17.6 160 319-484 87-295 (763)
349 2p9w_A MAL S 1 allergenic prot 60.6 1.1E+02 0.0036 32.6 13.7 131 319-462 147-303 (334)
350 4ggc_A P55CDC, cell division c 60.6 47 0.0016 34.3 11.4 88 373-467 42-131 (318)
351 2pm9_A Protein WEB1, protein t 60.6 38 0.0013 36.8 11.1 110 320-438 79-203 (416)
352 2z3z_A Dipeptidyl aminopeptida 59.2 82 0.0028 37.3 14.6 104 333-439 283-398 (706)
353 1nir_A Nitrite reductase; hemo 59.2 78 0.0027 36.4 13.8 105 317-435 146-260 (543)
354 3dm0_A Maltose-binding peripla 58.9 66 0.0022 38.2 13.6 134 319-465 441-583 (694)
355 2cn3_A Xyloglucanase, beta-1,4 58.8 22 0.00076 42.9 9.3 128 343-481 555-695 (737)
356 2xyi_A Probable histone-bindin 58.6 29 0.001 38.4 9.8 102 322-432 196-309 (430)
357 1sqj_A OXG-RCBH, oligoxylogluc 58.5 92 0.0031 37.8 14.8 139 343-483 3-162 (789)
358 2xdw_A Prolyl endopeptidase; a 58.0 1.4E+02 0.0049 35.3 16.5 115 320-438 245-375 (710)
359 2e5p_A Protein PHF1, PHD finge 57.9 28 0.00097 26.7 6.0 37 950-986 23-61 (68)
360 3sfz_A APAF-1, apoptotic pepti 57.7 25 0.00085 45.4 10.2 104 321-435 974-1077(1249)
361 3htm_A Speckle-type POZ protei 57.0 6.5 0.00022 37.5 3.4 34 130-163 132-165 (172)
362 3i2z_B RNA chaperone, negative 56.9 42 0.0014 26.5 7.5 51 952-1007 5-59 (71)
363 3dm0_A Maltose-binding peripla 56.2 57 0.002 38.7 12.4 64 365-435 572-635 (694)
364 2p9w_A MAL S 1 allergenic prot 54.8 1.8E+02 0.0061 30.8 14.2 95 333-433 99-216 (334)
365 2yty_A Cold shock domain-conta 54.4 31 0.0011 28.6 6.6 53 948-1005 14-67 (88)
366 3ju4_A Endo-N-acetylneuraminid 54.1 1.1E+02 0.0039 32.8 12.1 121 342-462 268-405 (670)
367 3hxj_A Pyrrolo-quinoline quino 54.1 74 0.0025 33.1 11.7 137 319-478 147-290 (330)
368 3c5m_A Oligogalacturonate lyas 54.1 45 0.0015 35.8 10.2 102 334-439 216-336 (396)
369 1wfq_A UNR protein; beta-barre 52.7 59 0.002 27.0 8.0 54 950-1008 16-70 (89)
370 2z3z_A Dipeptidyl aminopeptida 52.1 1.4E+02 0.0048 35.2 15.0 63 377-439 236-301 (706)
371 3vu4_A KMHSV2; beta-propeller 51.1 1.7E+02 0.0059 30.9 14.3 64 365-433 206-272 (355)
372 3frx_A Guanine nucleotide-bind 51.1 1.2E+02 0.0043 31.4 12.9 103 319-434 118-229 (319)
373 1k32_A Tricorn protease; prote 50.7 56 0.0019 41.2 11.6 106 334-440 358-469 (1045)
374 3hrp_A Uncharacterized protein 50.4 59 0.002 35.8 10.4 108 365-479 141-255 (409)
375 1pex_A Collagenase-3, MMP-13; 50.4 1.9E+02 0.0065 28.2 13.9 100 319-435 79-195 (207)
376 4h5i_A Guanine nucleotide-exch 49.7 64 0.0022 34.7 10.5 106 319-431 230-342 (365)
377 2m0o_A PHD finger protein 1; t 49.4 21 0.00072 28.2 4.3 35 950-984 40-76 (79)
378 2mad_H Methylamine dehydrogena 49.4 2.7E+02 0.0094 29.8 15.7 109 319-436 32-160 (373)
379 3o4h_A Acylamino-acid-releasin 49.1 88 0.003 36.0 12.2 113 321-440 76-192 (582)
380 2vkp_A BTB/POZ domain-containi 49.0 11 0.00037 32.7 3.2 33 162-194 77-109 (109)
381 1nr0_A Actin interacting prote 49.0 1.8E+02 0.0063 33.6 15.1 105 322-437 162-275 (611)
382 3azo_A Aminopeptidase; POP fam 48.5 1.6E+02 0.0054 34.4 14.6 114 319-439 252-376 (662)
383 1ijq_A LDL receptor, low-densi 47.9 2.6E+02 0.0088 29.1 19.1 142 319-473 88-238 (316)
384 3aqq_A Calcium-regulated heat 47.9 41 0.0014 31.0 6.8 51 950-1007 60-114 (147)
385 3iuj_A Prolyl endopeptidase; h 47.0 2.9E+02 0.01 32.5 16.6 143 333-482 258-414 (693)
386 1pex_A Collagenase-3, MMP-13; 46.7 2.2E+02 0.0074 27.8 16.2 135 319-473 33-192 (207)
387 1ijq_A LDL receptor, low-densi 46.5 2.7E+02 0.0093 28.9 17.0 127 334-473 10-152 (316)
388 1gut_A Mopii, molybdate bindin 46.4 29 0.00099 26.9 5.0 47 951-1004 7-59 (68)
389 3cam_A Cold-shock domain famil 46.3 61 0.0021 25.2 6.8 50 953-1007 2-55 (67)
390 3lp9_A LS-24; SEED albumin, pl 46.3 1.1E+02 0.0039 30.4 10.7 99 364-473 71-201 (227)
391 1fr3_A MOP, molybdate/tungstat 46.0 29 0.00098 26.7 5.0 48 950-1004 6-58 (67)
392 2j04_A TAU60, YPL007P, hypothe 45.6 2.6E+02 0.0088 32.2 14.7 93 335-434 108-213 (588)
393 1nr0_A Actin interacting prote 44.8 2.4E+02 0.0082 32.5 15.2 109 319-438 250-361 (611)
394 3v65_B Low-density lipoprotein 44.3 3.3E+02 0.011 29.3 15.9 127 334-473 96-234 (386)
395 3gre_A Serine/threonine-protei 44.0 1.3E+02 0.0043 32.9 12.0 66 365-436 181-249 (437)
396 2xdw_A Prolyl endopeptidase; a 43.0 3.5E+02 0.012 31.8 16.6 146 333-481 150-331 (710)
397 1yr2_A Prolyl oligopeptidase; 42.8 2.6E+02 0.009 33.2 15.4 113 321-438 281-401 (741)
398 3vu4_A KMHSV2; beta-propeller 42.7 3.2E+02 0.011 28.7 16.2 59 372-435 155-230 (355)
399 3v64_C Agrin; beta propeller, 42.5 1.9E+02 0.0064 30.8 12.7 115 334-461 53-177 (349)
400 2yy9_A Zinc finger and BTB dom 42.0 20 0.00068 32.6 3.9 36 162-197 87-122 (135)
401 3o4h_A Acylamino-acid-releasin 41.8 42 0.0014 38.9 7.8 131 320-462 161-300 (582)
402 1qks_A Cytochrome CD1 nitrite 41.6 2.3E+02 0.0079 32.6 14.0 147 319-474 208-374 (567)
403 3hqi_A Speckle-type POZ protei 40.7 15 0.00052 38.9 3.4 34 130-163 272-305 (312)
404 2bkl_A Prolyl endopeptidase; m 39.4 2.8E+02 0.0095 32.6 14.8 145 333-481 146-315 (695)
405 3pe7_A Oligogalacturonate lyas 39.4 3.6E+02 0.012 28.3 15.3 107 333-439 59-184 (388)
406 1c9o_A CSPB, cold-shock protei 39.0 1.2E+02 0.004 23.5 7.4 51 953-1007 2-54 (66)
407 3dw8_B Serine/threonine-protei 38.6 96 0.0033 33.9 9.9 105 321-437 240-378 (447)
408 3pe7_A Oligogalacturonate lyas 37.8 1.8E+02 0.0061 30.9 11.8 107 334-442 168-283 (388)
409 3i4o_A Translation initiation 37.7 63 0.0021 26.2 5.6 61 950-1015 13-75 (79)
410 3tc9_A Hypothetical hydrolase; 37.4 77 0.0026 35.1 8.7 126 320-462 150-289 (430)
411 2e5q_A PHD finger protein 19; 37.4 43 0.0015 25.3 4.2 35 950-984 21-57 (63)
412 2z8h_A Transcription regulator 37.3 17 0.00057 33.2 2.6 34 162-195 101-134 (138)
413 1qks_A Cytochrome CD1 nitrite 37.3 3.6E+02 0.012 30.9 14.7 156 319-484 255-437 (567)
414 1yr2_A Prolyl oligopeptidase; 36.5 5.3E+02 0.018 30.4 16.8 145 334-481 189-360 (741)
415 3amr_A 3-phytase; beta-propell 36.3 4.2E+02 0.014 28.2 14.2 143 333-482 98-271 (355)
416 3dr2_A Exported gluconolactona 36.1 72 0.0025 33.1 7.9 115 333-462 168-296 (305)
417 2bkl_A Prolyl endopeptidase; m 35.8 5E+02 0.017 30.3 16.3 126 333-462 201-337 (695)
418 1itv_A MMP9; adaptive molecula 35.7 3E+02 0.01 26.4 13.6 136 319-473 16-174 (195)
419 1itv_A MMP9; adaptive molecula 35.5 3.1E+02 0.011 26.4 11.8 99 319-434 64-176 (195)
420 2gop_A Trilobed protease; beta 35.5 99 0.0034 32.4 9.0 98 333-440 84-215 (347)
421 1hxn_A Hemopexin, HPX; heme, b 35.2 2.9E+02 0.0098 27.2 11.5 114 364-490 27-164 (219)
422 1r29_A B-cell lymphoma 6 prote 34.9 35 0.0012 30.3 4.4 32 162-193 95-126 (127)
423 2ecf_A Dipeptidyl peptidase IV 34.8 1.8E+02 0.006 34.5 12.1 107 332-440 310-423 (741)
424 2be1_A Serine/threonine-protei 34.6 23 0.00079 38.0 3.5 110 368-483 12-142 (339)
425 3a0j_A Cold shock protein; OB- 34.6 1.2E+02 0.0041 24.0 6.9 52 953-1008 2-55 (73)
426 1su3_A Interstitial collagenas 34.6 2.4E+02 0.0082 31.3 12.0 141 319-475 272-434 (450)
427 3c75_H MADH, methylamine dehyd 34.5 2.1E+02 0.0073 31.5 11.6 111 318-435 83-212 (426)
428 2xk0_A Polycomb protein PCL; t 34.3 63 0.0022 25.1 4.8 34 950-983 29-62 (69)
429 3b84_A Zinc finger and BTB dom 34.1 33 0.0011 30.1 4.0 32 162-193 86-117 (119)
430 2be1_A Serine/threonine-protei 33.6 65 0.0022 34.5 6.8 100 334-440 20-140 (339)
431 2ecf_A Dipeptidyl peptidase IV 33.2 2.1E+02 0.0071 33.9 12.4 62 377-439 264-328 (741)
432 3p5b_L Low density lipoprotein 33.1 4.9E+02 0.017 28.0 15.0 115 334-461 92-220 (400)
433 3sjl_D Methylamine dehydrogena 32.8 2.2E+02 0.0074 31.0 11.0 110 319-435 44-172 (386)
434 2ast_A S-phase kinase-associat 32.7 41 0.0014 31.5 4.6 93 114-217 24-140 (159)
435 2ytx_A Cold shock domain-conta 32.5 67 0.0023 27.2 5.4 51 950-1005 16-67 (97)
436 1jjg_A M156R; beta barrel, S1 32.4 36 0.0012 27.9 3.3 57 558-614 26-94 (102)
437 2vpk_A Myoneurin; transcriptio 31.7 41 0.0014 29.3 4.2 30 162-191 86-115 (116)
438 1yez_A MM1357; MAR30, autostru 31.3 1.4E+02 0.0046 23.2 6.7 49 948-1010 12-60 (68)
439 2ymu_A WD-40 repeat protein; u 31.2 1.7E+02 0.0058 33.2 10.8 104 320-436 438-543 (577)
440 3v64_C Agrin; beta propeller, 30.6 5E+02 0.017 27.3 20.2 141 319-473 127-275 (349)
441 2ytv_A Cold shock domain-conta 30.5 33 0.0011 27.9 2.9 50 951-1006 7-58 (79)
442 2oit_A Nucleoporin 214KDA; NH2 30.3 5.6E+02 0.019 27.8 16.0 114 321-440 163-292 (434)
443 2kcm_A Cold shock domain famil 29.8 1.1E+02 0.0036 24.4 5.8 47 954-1005 2-52 (74)
444 2gop_A Trilobed protease; beta 29.7 2.6E+02 0.009 28.9 11.3 95 334-440 152-259 (347)
445 2oit_A Nucleoporin 214KDA; NH2 29.7 1.7E+02 0.0058 32.2 10.0 60 366-432 162-223 (434)
446 1g6p_A Cold shock protein TMCS 29.5 97 0.0033 24.0 5.4 49 954-1006 2-52 (66)
447 1n7d_A LDL receptor, low-densi 29.3 2.5E+02 0.0087 33.2 11.9 140 319-473 464-614 (699)
448 2q81_A MIZ-1 protein; BTB/POZ 28.5 53 0.0018 28.8 4.3 30 162-191 88-117 (119)
449 1k32_A Tricorn protease; prote 28.1 2.6E+02 0.009 34.9 12.4 99 334-439 317-416 (1045)
450 2mad_H Methylamine dehydrogena 28.1 3.7E+02 0.013 28.7 12.1 65 407-473 278-350 (373)
451 3f6k_A Sortilin; protein sorti 27.3 1.3E+02 0.0046 35.4 8.6 102 378-481 67-177 (685)
452 2l55_A SILB,silver efflux prot 26.4 1.3E+02 0.0046 24.4 6.0 60 953-1016 6-70 (82)
453 2ymu_A WD-40 repeat protein; u 25.8 6.3E+02 0.022 28.1 14.5 131 320-466 315-449 (577)
454 3oyo_A Hemopexin fold protein 25.7 4.9E+02 0.017 25.6 11.6 99 318-431 69-197 (225)
455 3tc9_A Hypothetical hydrolase; 24.9 4.9E+02 0.017 28.4 12.6 104 319-431 190-300 (430)
456 1buo_A POZ domain, protein (pr 24.9 61 0.0021 28.4 4.1 32 162-193 89-120 (121)
457 2ppi_A Gigaxonin; BTB domain, 24.7 62 0.0021 29.5 4.2 30 162-191 115-144 (144)
458 2qe8_A Uncharacterized protein 24.1 6.2E+02 0.021 26.2 13.1 113 365-479 27-161 (343)
459 2j04_A TAU60, YPL007P, hypothe 23.6 4.9E+02 0.017 29.9 12.1 135 318-466 139-290 (588)
460 3v65_B Low-density lipoprotein 23.6 6.9E+02 0.024 26.6 17.6 140 319-471 127-275 (386)
461 3lp9_A LS-24; SEED albumin, pl 23.0 1E+02 0.0035 30.8 5.7 101 318-433 71-202 (227)
462 2dgy_A MGC11102 protein; EIF-1 22.9 1.6E+02 0.0056 25.5 6.1 59 951-1014 15-75 (111)
463 2l1t_A Uncharacterized protein 22.8 1.4E+02 0.0047 25.7 5.5 21 512-532 4-24 (109)
464 3ts2_A Protein LIN-28 homolog 22.6 1.6E+02 0.0054 27.1 6.4 53 951-1008 8-71 (148)
465 3db3_A E3 ubiquitin-protein li 22.4 1.1E+02 0.0036 28.3 4.9 17 638-654 86-102 (161)
466 3p8b_B Transcription antitermi 22.3 1.5E+02 0.0051 27.3 6.4 54 961-1014 42-122 (152)
467 4h5i_A Guanine nucleotide-exch 22.1 6.9E+02 0.024 26.1 18.5 141 321-468 147-294 (365)
468 3ba0_A Macrophage metalloelast 22.0 7.4E+02 0.025 26.4 13.1 102 319-437 236-355 (365)
469 2bti_A Carbon storage regulato 21.9 53 0.0018 25.3 2.4 26 990-1015 10-35 (63)
470 2jpp_A Translational repressor 21.7 53 0.0018 25.8 2.4 25 990-1014 8-32 (70)
471 2ece_A 462AA long hypothetical 21.5 8.5E+02 0.029 26.9 14.2 156 319-479 95-295 (462)
472 2if5_A Zinc finger and BTB dom 21.4 80 0.0027 27.5 4.1 29 162-190 91-119 (120)
473 3c7x_A Matrix metalloproteinas 21.3 3.1E+02 0.011 26.4 8.7 102 360-475 10-129 (196)
474 3ulj_A LIN28B, DNA-binding pro 21.1 2.2E+02 0.0076 23.6 6.4 52 950-1006 6-68 (90)
475 2lss_A Cold shock-like protein 26.2 21 0.00071 28.3 0.0 52 951-1006 3-57 (70)
476 2oiz_A Aromatic amine dehydrog 20.3 4.3E+02 0.015 27.9 10.7 71 407-481 265-342 (361)
477 1hxn_A Hemopexin, HPX; heme, b 20.3 6.1E+02 0.021 24.8 11.7 127 319-463 28-188 (219)
478 4hw6_A Hypothetical protein, I 20.1 2.6E+02 0.0088 30.8 8.9 127 320-462 153-292 (433)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=9.4e-42 Score=370.43 Aligned_cols=252 Identities=30% Similarity=0.552 Sum_probs=237.4
Q ss_pred CccccCchHHHHHHHHHHHhcCCCccEEEEEC---CEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEec------CC
Q psy9769 42 PYRNVHHTSKAFETMNIMRKQNLLCDVKLIAD---GVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLK------GV 111 (1026)
Q Consensus 42 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~---~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~------~~ 111 (1026)
.+.++.|++.+++.|+.+++++.+|||+|.++ |+.|+|||.||+++|+||++||+ +|.|+.+..|.++ ++
T Consensus 9 ~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 9 DFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP 88 (279)
T ss_dssp EEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS
T ss_pred CcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC
Confidence 46778899999999999999999999999998 99999999999999999999999 8999999999998 89
Q ss_pred CHHHHHHHhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHHhhhhcCchhHHHHHHhhhh
Q psy9769 112 DPNALKLLIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRAFADLHSCLDLLSTAENYIE 191 (1026)
Q Consensus 112 ~~~~f~~~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 191 (1026)
++++|..+++|||||++.++.+++.+++.+|++|+++.|++.|.+||.+.++.+||+.++.+|..|++..|.+.|.+||.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 168 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIR 168 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheecccccccCCHhhHhceeccccccccchhhHHHHHHHHHhcChhHHHHHHHHHHhhcccCCCCHHHHHhhcccc
Q psy9769 192 LHFAEIVECEEFLSLSHEQVLGLISSDKLMVSNEEKVFECVIAWVNYDLESRQKHVAELMEYVRLPLLSEDYLIQRVEEE 271 (1026)
Q Consensus 192 ~~~~~l~~~~~f~~L~~~~l~~ll~~~~l~v~~E~~v~~av~~Wi~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~~~~~ 271 (1026)
+||..++.+++|.+|+.+.+..+|+++.|++.+|.+||+++++|++++++.|.+++.+|+++|||++|++++|.+.+...
T Consensus 169 ~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~ 248 (279)
T 3i3n_A 169 RNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPE 248 (279)
T ss_dssp HTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTS
T ss_pred HHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccCccchhhHHHHhheeee
Q psy9769 272 TVFKNDIRCKDYLIEALKYHIL 293 (1026)
Q Consensus 272 ~l~~~~~~~~~~i~~a~~~~~~ 293 (1026)
+++..+..|.+++.+|+.||..
T Consensus 249 ~l~~~~~~c~~~l~ea~~~~~~ 270 (279)
T 3i3n_A 249 RLVANNEVCVKLVADAVERHAL 270 (279)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHH
T ss_pred chhcCCHHHHHHHHHHHHhccC
Confidence 9999999999999999999975
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=4e-41 Score=360.79 Aligned_cols=245 Identities=31% Similarity=0.579 Sum_probs=210.9
Q ss_pred CCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCc--cCcccEEEecCCCHHHHH
Q psy9769 41 PPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFE--ESKQERIVLKGVDPNALK 117 (1026)
Q Consensus 41 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~--e~~~~~i~l~~~~~~~f~ 117 (1026)
..+.++.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++. |+....|.++++++++|+
T Consensus 7 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~ 86 (256)
T 3hve_A 7 SAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMR 86 (256)
T ss_dssp ---CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHH
T ss_pred CccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHH
Confidence 34677889999999999999999999999999999999999999999999999999 666 678889999999999999
Q ss_pred HHhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhhhe
Q psy9769 118 LLIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRAFADLHSCLDLLSTAENYIELHFAEI 197 (1026)
Q Consensus 118 ~~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~l 197 (1026)
.+++|+|||++.++.+++.+++.+|++|+++.|++.|.+||.+.++.+||+.++.+|+.|++..|.+.|.+||.+||..+
T Consensus 87 ~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v 166 (256)
T 3hve_A 87 EILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDV 166 (256)
T ss_dssp HHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccCCHhhHhceeccccccccchhhHHHHHHHHHhcChhHHHHHHHHHHhhcccCCCCHHHHHhhccccceeccC
Q psy9769 198 VECEEFLSLSHEQVLGLISSDKLMVSNEEKVFECVIAWVNYDLESRQKHVAELMEYVRLPLLSEDYLIQRVEEETVFKND 277 (1026)
Q Consensus 198 ~~~~~f~~L~~~~l~~ll~~~~l~v~~E~~v~~av~~Wi~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~~~~~~l~~~~ 277 (1026)
..+++|.+|+.+.+..+|+++.|++.+|.+||+++++|++++++.|.+++.+|+++|||++|++++|.+.++..++++..
T Consensus 167 ~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~ 246 (256)
T 3hve_A 167 SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREI 246 (256)
T ss_dssp TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHH
T ss_pred hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred -ccchhhHH
Q psy9769 278 -IRCKDYLI 285 (1026)
Q Consensus 278 -~~~~~~i~ 285 (1026)
..|.+++.
T Consensus 247 ~~~c~~ll~ 255 (256)
T 3hve_A 247 VKECSNIPL 255 (256)
T ss_dssp HCC------
T ss_pred HHHHHHHhh
Confidence 67887653
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=344.28 Aligned_cols=284 Identities=49% Similarity=0.821 Sum_probs=241.1
Q ss_pred cCCCCCCCCccCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCC-----CeEEE
Q psy9769 307 TPRTKPRQPLRVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNG-----SLRVY 381 (1026)
Q Consensus 307 ~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~y 381 (1026)
++++.+|..+..++.||++||.+...++++++||+.+++|..+++||.+|.+|++++++++||++||.++ ++++|
T Consensus 3 ~~~~~~r~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 82 (302)
T 2xn4_A 3 SVRTRLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSY 82 (302)
T ss_dssp ------------CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEE
T ss_pred CCcccCCcccCCCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEE
Confidence 4567778777788999999998877788999999999999999999999999999999999999999763 68999
Q ss_pred eCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEe
Q psy9769 382 DPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAEN 461 (1026)
Q Consensus 382 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~G 461 (1026)
|+.+++|+.+++||.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++|
T Consensus 83 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 162 (302)
T 2xn4_A 83 DPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVG 162 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEe
Confidence 99999999999999999999999999999999999877778999999999999999999999999999999999999999
Q ss_pred CC--------CceeeEEcCcccEEEeecCCCcccceEEEeeeccccccchhhccCCccccccccccccCCCcEEEEEEEE
Q psy9769 462 LD--------GRILGCVKEITDWGLIIELPNFLSASVHITEISDVYSDLLEKYSNGTIEEIPELSNLFSIGDLVVAKILE 533 (1026)
Q Consensus 462 G~--------~~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~vG~~v~~~v~~ 533 (1026)
|. ..+..||..+++|+.+++||.++.+...
T Consensus 163 G~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~------------------------------------------ 200 (302)
T 2xn4_A 163 GYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGV------------------------------------------ 200 (302)
T ss_dssp CEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEE------------------------------------------
T ss_pred CCCCCCCccccEEEEEeCCCCcEEECCCCccccccccE------------------------------------------
Confidence 94 2356688888889998888764311110
Q ss_pred eeecccCceeeEEeeccccccccccccccccCcccccccccccccceeeeecccceeeeeeccccccCceEEEEEeeeee
Q psy9769 534 CVTNNLGQKQIKASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDSVILGQIVTCMISKIKV 613 (1026)
Q Consensus 534 ~~~~~~~~~~~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~~~~G~~v~~~v~~~~~ 613 (1026)
T Consensus 201 -------------------------------------------------------------------------------- 200 (302)
T 2xn4_A 201 -------------------------------------------------------------------------------- 200 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeEEEEechHHHHhhhccCCCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchhhhhhcccc
Q psy9769 614 AASMSILEVTLDEELIRSANRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYLTNK 693 (1026)
Q Consensus 614 ~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~~G~ 693 (1026)
T Consensus 201 -------------------------------------------------------------------------------- 200 (302)
T 2xn4_A 201 -------------------------------------------------------------------------------- 200 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccceeeeeccccceEEeechhhhhhcccCCCCcceeeeeceeeeeeeccccccccccCccCCCCccccccccCCCCe
Q psy9769 694 RVDLDCSVLYVCPRHFHVYLSCNEALLERQTGRPEFSVCISIVKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNAELS 773 (1026)
Q Consensus 694 ~~~~~~~Il~vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~ 773 (1026)
...+++
T Consensus 201 --------------------------------------------------------------------------~~~~~~ 206 (302)
T 2xn4_A 201 --------------------------------------------------------------------------GVLNNL 206 (302)
T ss_dssp --------------------------------------------------------------------------EEETTE
T ss_pred --------------------------------------------------------------------------EEECCE
Confidence 001127
Q ss_pred EEEeccccCCCccccceEEEecCCCCeeEEcccccccccCceEEEECCEEEEEccCCCCcccceeEEeeCCCCCeeecC-
Q psy9769 774 TIGVGGYDGISRQCLSSVEMYSPERNTWEPVKDMLYKRSGAGVGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSGVP- 852 (1026)
Q Consensus 774 ~~~~gG~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~~~- 852 (1026)
+|++||.++.. ..++++.||+.+++|+.+++++.+|..+.+..+++++|++||.++.....++++||+++++|+.++
T Consensus 207 iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 284 (302)
T 2xn4_A 207 LYAVGGHDGPL--VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSS 284 (302)
T ss_dssp EEEECCBSSSS--BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSS
T ss_pred EEEECCCCCCc--ccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCc
Confidence 89999987754 478999999999999999999999999999999999999999988778899999999999999996
Q ss_pred CcccccccceEEeecc
Q psy9769 853 DMALCRRNAVLESVAS 868 (1026)
Q Consensus 853 ~~~~~r~~~~~~~~~~ 868 (1026)
.|+.+|..+++..+.+
T Consensus 285 ~~~~~r~~~~~~~~~~ 300 (302)
T 2xn4_A 285 CMSTGRSYAGVTVIDK 300 (302)
T ss_dssp CCSSCCBSCEEEEEEC
T ss_pred ccCcccccceEEEecc
Confidence 8999999888877654
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.8e-36 Score=334.38 Aligned_cols=275 Identities=35% Similarity=0.577 Sum_probs=240.8
Q ss_pred CCCccCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEecc----C-----CCeEEEeC
Q psy9769 313 RQPLRVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGF----N-----GSLRVYDP 383 (1026)
Q Consensus 313 ~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~----~-----~~~~~yd~ 383 (1026)
.+++..++.||++||.+...++++++||+.+++|+.++++|.+|.+|++++++++||++||. + +++++||+
T Consensus 18 ~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 18 SHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp ---CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred ccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECC
Confidence 33445789999999986667889999999999999999999999999999999999999998 3 47899999
Q ss_pred CCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCC
Q psy9769 384 STNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLD 463 (1026)
Q Consensus 384 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 463 (1026)
.+++|+.+++||.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCC
Confidence 99999999999999999999999999999999887767899999999999999999999999999999999999999994
Q ss_pred C------ceeeEEcCcccEEEeecCCCcccceEEEeeeccccccchhhccCCccccccccccccCCCcEEEEEEEEeeec
Q psy9769 464 G------RILGCVKEITDWGLIIELPNFLSASVHITEISDVYSDLLEKYSNGTIEEIPELSNLFSIGDLVVAKILECVTN 537 (1026)
Q Consensus 464 ~------~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~vG~~v~~~v~~~~~~ 537 (1026)
. .+..||..+++|+.+++||.++.+...
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---------------------------------------------- 211 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGV---------------------------------------------- 211 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE----------------------------------------------
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceE----------------------------------------------
Confidence 3 456788888889988887764311110
Q ss_pred ccCceeeEEeeccccccccccccccccCcccccccccccccceeeeecccceeeeeeccccccCceEEEEEeeeeeccce
Q psy9769 538 NLGQKQIKASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDSVILGQIVTCMISKIKVAASM 617 (1026)
Q Consensus 538 ~~~~~~~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~~~~G~~v~~~v~~~~~~~~~ 617 (1026)
T Consensus 212 -------------------------------------------------------------------------------- 211 (308)
T 1zgk_A 212 -------------------------------------------------------------------------------- 211 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEechHHHHhhhccCCCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchhhhhhcccccccc
Q psy9769 618 SILEVTLDEELIRSANRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYLTNKRVDL 697 (1026)
Q Consensus 618 ~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~~G~~~~~ 697 (1026)
T Consensus 212 -------------------------------------------------------------------------------- 211 (308)
T 1zgk_A 212 -------------------------------------------------------------------------------- 211 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeeccccceEEeechhhhhhcccCCCCcceeeeeceeeeeeeccccccccccCccCCCCccccccccCCCCeEEEe
Q psy9769 698 DCSVLYVCPRHFHVYLSCNEALLERQTGRPEFSVCISIVKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNAELSTIGV 777 (1026)
Q Consensus 698 ~~~Il~vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1026)
...++++|++
T Consensus 212 ----------------------------------------------------------------------~~~~~~iyv~ 221 (308)
T 1zgk_A 212 ----------------------------------------------------------------------CVLHNCIYAA 221 (308)
T ss_dssp ----------------------------------------------------------------------EEETTEEEEE
T ss_pred ----------------------------------------------------------------------EEECCEEEEE
Confidence 0011278999
Q ss_pred ccccCCCccccceEEEecCCCCeeEEcccccccccCceEEEECCEEEEEccCCCCcccceeEEeeCCCCCeeecCCcccc
Q psy9769 778 GGYDGISRQCLSSVEMYSPERNTWEPVKDMLYKRSGAGVGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSGVPDMALC 857 (1026)
Q Consensus 778 gG~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~~~~~~~~ 857 (1026)
||.++.. ..++++.||+.+++|+.+++++.+|..+.+..+++++|++||.++.....++++||+++++|+.+++|+.+
T Consensus 222 GG~~~~~--~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 222 GGYDGQD--QLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp CCBCSSS--BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred eCCCCCC--ccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCC
Confidence 9988654 38999999999999999999999999999999999999999998887889999999999999999999999
Q ss_pred cccceEEe
Q psy9769 858 RRNAVLES 865 (1026)
Q Consensus 858 r~~~~~~~ 865 (1026)
|..+++..
T Consensus 300 r~~~~~~~ 307 (308)
T 1zgk_A 300 RSGVGVAV 307 (308)
T ss_dssp CBSCEEEE
T ss_pred cccceeEe
Confidence 98877654
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=332.67 Aligned_cols=269 Identities=23% Similarity=0.350 Sum_probs=237.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC----CCeEEEeCCCCeEEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN----GSLRVYDPSTNEWSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~----~~~~~yd~~~~~W~~~~~~ 394 (1026)
.+.||++||.+. .+++++||+.+++|+.+++||.+|.+|++++++++||++||.+ +++++||+.+++|+.++++
T Consensus 11 ~~~l~~~GG~~~--~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 11 HDYRIALFGGSQ--PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CCEEEEEECCSS--TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred cceEEEEeCCCC--CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 478999999765 7899999999999999999999999999999999999999976 5789999999999999999
Q ss_pred cCCcceeEEEEECCEEEEEeccC-CCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCC----------
Q psy9769 395 EARRSTLGVAVLNSLIYAVGGFD-GSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLD---------- 463 (1026)
Q Consensus 395 p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~---------- 463 (1026)
|.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEEC
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccccc
Confidence 99999999999999999999987 5566899999999999999999999999999999999999999993
Q ss_pred CceeeEEcCcccEEEeecCCCcccceEEEeeeccccccchhhccCCccccccccccccCCCcEEEEEEEEeeecccCcee
Q psy9769 464 GRILGCVKEITDWGLIIELPNFLSASVHITEISDVYSDLLEKYSNGTIEEIPELSNLFSIGDLVVAKILECVTNNLGQKQ 543 (1026)
Q Consensus 464 ~~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~vG~~v~~~v~~~~~~~~~~~~ 543 (1026)
..+..||..+++|+.+++||.++.+...
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~---------------------------------------------------- 196 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGL---------------------------------------------------- 196 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEE----------------------------------------------------
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceE----------------------------------------------------
Confidence 3456788888899999888764311110
Q ss_pred eEEeeccccccccccccccccCcccccccccccccceeeeecccceeeeeeccccccCceEEEEEeeeeeccceeEEEEe
Q psy9769 544 IKASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDSVILGQIVTCMISKIKVAASMSILEVT 623 (1026)
Q Consensus 544 ~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~~~~G~~v~~~v~~~~~~~~~~~i~ls 623 (1026)
T Consensus 197 -------------------------------------------------------------------------------- 196 (306)
T 3ii7_A 197 -------------------------------------------------------------------------------- 196 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHhhhccCCCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchhhhhhcccccccccceeee
Q psy9769 624 LDEELIRSANRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYLTNKRVDLDCSVLY 703 (1026)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~ 703 (1026)
T Consensus 197 -------------------------------------------------------------------------------- 196 (306)
T 3ii7_A 197 -------------------------------------------------------------------------------- 196 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccceEEeechhhhhhcccCCCCcceeeeeceeeeeeeccccccccccCccCCCCccccccccCCCCeEEEeccccCC
Q psy9769 704 VCPRHFHVYLSCNEALLERQTGRPEFSVCISIVKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNAELSTIGVGGYDGI 783 (1026)
Q Consensus 704 vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~ 783 (1026)
...++++|++||.++.
T Consensus 197 ----------------------------------------------------------------~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 197 ----------------------------------------------------------------VFVKDKIFAVGGQNGL 212 (306)
T ss_dssp ----------------------------------------------------------------EEETTEEEEECCEETT
T ss_pred ----------------------------------------------------------------EEECCEEEEEeCCCCC
Confidence 0011278999998776
Q ss_pred CccccceEEEecCCCCeeEEcccccccccCceEEEECCEEEEEccCCCCcccceeEEeeCCCCCeeecCCcccccccceE
Q psy9769 784 SRQCLSSVEMYSPERNTWEPVKDMLYKRSGAGVGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSGVPDMALCRRNAVL 863 (1026)
Q Consensus 784 ~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~~~~~~~~r~~~~~ 863 (1026)
. ..++++.||+.+++|+.+++++.+|..+.+..+++++|++||.++.....+++.||+++++|+.++.++.+|..+.+
T Consensus 213 ~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 290 (306)
T 3ii7_A 213 G--GLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCL 290 (306)
T ss_dssp E--EBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCE
T ss_pred C--CCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEE
Confidence 3 48899999999999999999999999999999999999999998888889999999999999999999999988877
Q ss_pred Eeec
Q psy9769 864 ESVA 867 (1026)
Q Consensus 864 ~~~~ 867 (1026)
..+.
T Consensus 291 ~~~~ 294 (306)
T 3ii7_A 291 ICVV 294 (306)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 7653
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=328.39 Aligned_cols=280 Identities=34% Similarity=0.577 Sum_probs=239.6
Q ss_pred cCCCCCCCCccCCcEEEEEcC-CC-CCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC-----CCeE
Q psy9769 307 TPRTKPRQPLRVPKVMLVVGG-QA-PKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN-----GSLR 379 (1026)
Q Consensus 307 ~~~~~~~~~~~~~~~i~v~GG-~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-----~~~~ 379 (1026)
.++.+||. ..++.||++|| .+ ...++++++||+.+++|+.++++|.+|.+|++++++++||++||.+ ++++
T Consensus 4 ~~~~~pr~--~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 81 (301)
T 2vpj_A 4 GPRTRARL--GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVE 81 (301)
T ss_dssp -----------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEE
T ss_pred Cccccccc--cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEE
Confidence 34555553 36789999999 44 3467899999999999999999999999999999999999999976 3799
Q ss_pred EEeCCCCe---EEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCE
Q psy9769 380 VYDPSTNE---WSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGC 456 (1026)
Q Consensus 380 ~yd~~~~~---W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 456 (1026)
+||+.+++ |+.++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++
T Consensus 82 ~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ 161 (301)
T 2vpj_A 82 CLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGV 161 (301)
T ss_dssp EEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTE
T ss_pred EEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCE
Confidence 99999999 999999999999999999999999999998777789999999999999999999999999999999999
Q ss_pred EEEEeCCC------ceeeEEcCcccEEEeecCCCcccceEEEeeeccccccchhhccCCccccccccccccCCCcEEEEE
Q psy9769 457 LYAENLDG------RILGCVKEITDWGLIIELPNFLSASVHITEISDVYSDLLEKYSNGTIEEIPELSNLFSIGDLVVAK 530 (1026)
Q Consensus 457 lyv~GG~~------~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~vG~~v~~~ 530 (1026)
||++||.. .+..||..+++|+.++++|.++.+...
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~--------------------------------------- 202 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV--------------------------------------- 202 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE---------------------------------------
T ss_pred EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceE---------------------------------------
Confidence 99999943 456788888999999888764311110
Q ss_pred EEEeeecccCceeeEEeeccccccccccccccccCcccccccccccccceeeeecccceeeeeeccccccCceEEEEEee
Q psy9769 531 ILECVTNNLGQKQIKASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDSVILGQIVTCMISK 610 (1026)
Q Consensus 531 v~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~~~~G~~v~~~v~~ 610 (1026)
T Consensus 203 -------------------------------------------------------------------------------- 202 (301)
T 2vpj_A 203 -------------------------------------------------------------------------------- 202 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccceeEEEEechHHHHhhhccCCCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchhhhhhc
Q psy9769 611 IKVAASMSILEVTLDEELIRSANRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYL 690 (1026)
Q Consensus 611 ~~~~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~ 690 (1026)
T Consensus 203 -------------------------------------------------------------------------------- 202 (301)
T 2vpj_A 203 -------------------------------------------------------------------------------- 202 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceeeeeccccceEEeechhhhhhcccCCCCcceeeeeceeeeeeeccccccccccCccCCCCccccccccCC
Q psy9769 691 TNKRVDLDCSVLYVCPRHFHVYLSCNEALLERQTGRPEFSVCISIVKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNA 770 (1026)
Q Consensus 691 ~G~~~~~~~~Il~vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~ 770 (1026)
...
T Consensus 203 -----------------------------------------------------------------------------~~~ 205 (301)
T 2vpj_A 203 -----------------------------------------------------------------------------ALL 205 (301)
T ss_dssp -----------------------------------------------------------------------------EEE
T ss_pred -----------------------------------------------------------------------------EEE
Confidence 001
Q ss_pred CCeEEEeccccCCCccccceEEEecCCCCeeEEcccccccccCceEEEECCEEEEEccCCCCcccceeEEeeCCCCCeee
Q psy9769 771 ELSTIGVGGYDGISRQCLSSVEMYSPERNTWEPVKDMLYKRSGAGVGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSG 850 (1026)
Q Consensus 771 ~~~~~~~gG~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~ 850 (1026)
++++|++||.++... .++++.||+.+++|+.+++++.+|..+.+..+++++|++||.++.....+++.||+++++|+.
T Consensus 206 ~~~i~v~GG~~~~~~--~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAH--LSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp TTEEEEECCBCSSSB--CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCcc--cceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 127899999887653 889999999999999999999999999999999999999999887788999999999999999
Q ss_pred cCCcccccccceEEee
Q psy9769 851 VPDMALCRRNAVLESV 866 (1026)
Q Consensus 851 ~~~~~~~r~~~~~~~~ 866 (1026)
++.|+.+|..+++..+
T Consensus 284 ~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 284 VTSMGTQRCDAGVCVL 299 (301)
T ss_dssp EEEEEEEEESCEEEEE
T ss_pred cCCCCcccccceEEEe
Confidence 9999999998887765
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=314.87 Aligned_cols=161 Identities=19% Similarity=0.330 Sum_probs=142.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCC--CccccceeeEEECCEEEEEeccC-----------CCeEEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEM--PTRRCRAGLVFLHEKVYAVGGFN-----------GSLRVYDPST 385 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~-----------~~~~~yd~~~ 385 (1026)
.+.||++|| +++++|||.+++|+. +++ |.+|.+|++++++++||++||.. +++++||+.+
T Consensus 4 ~~~l~~~GG------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 4 QDLIFMISE------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD 76 (315)
T ss_dssp EEEEEEEET------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTT
T ss_pred ceEEEEEcC------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCC
Confidence 467999999 589999999999987 666 45899999999999999999961 1388999999
Q ss_pred CeEEeCCCCcCCcceeEEEEECCEEEEEeccC---CCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeC
Q psy9769 386 NEWSSAPPMEARRSTLGVAVLNSLIYAVGGFD---GSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENL 462 (1026)
Q Consensus 386 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 462 (1026)
++|+.+++||.+|.+|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999974 355689999999999999999999999999999999999999999
Q ss_pred C-------CceeeEEcCcccEEEeecCCCcc
Q psy9769 463 D-------GRILGCVKEITDWGLIIELPNFL 486 (1026)
Q Consensus 463 ~-------~~~~~~~~~~~~W~~~~~lP~~~ 486 (1026)
. ..+..||..+++|+.+++||.++
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 187 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTAR 187 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCch
Confidence 6 24567888889999998887643
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-33 Score=311.24 Aligned_cols=169 Identities=24% Similarity=0.420 Sum_probs=145.8
Q ss_pred CCCCCccCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCC--ccccceeeEEECCEEEEEeccC----C-------C
Q psy9769 311 KPRQPLRVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMP--TRRCRAGLVFLHEKVYAVGGFN----G-------S 377 (1026)
Q Consensus 311 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~~~iyv~GG~~----~-------~ 377 (1026)
++|......+.||++||. ++++|||.+++|.. +++| .+|.+|+++.+++.||++||.. + +
T Consensus 7 ~~r~~~~~~~~i~~~GG~------~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 79 (318)
T 2woz_A 7 IPRHGMFVKDLILLVNDT------AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSY 79 (318)
T ss_dssp SCCCCCSEEEEEEEECSS------EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBE
T ss_pred cccccceecchhhhcccc------ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCcccc
Confidence 345554556799999994 58999999999998 4444 6899999999999999999952 1 2
Q ss_pred eEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccC--CCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECC
Q psy9769 378 LRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFD--GSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNG 455 (1026)
Q Consensus 378 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 455 (1026)
+++||+.+++|+.+++||.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|+++++++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 159 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNG 159 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETT
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECC
Confidence 7899999999999999999999999999999999999986 34457899999999999999999999999999999999
Q ss_pred EEEEEeCC-------CceeeEEcCcccEEEeecCCCcc
Q psy9769 456 CLYAENLD-------GRILGCVKEITDWGLIIELPNFL 486 (1026)
Q Consensus 456 ~lyv~GG~-------~~~~~~~~~~~~W~~~~~lP~~~ 486 (1026)
+||++||. ..+..||..+++|+.++++|.++
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 197 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR 197 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc
Confidence 99999994 24667888889999998887643
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.2e-31 Score=303.79 Aligned_cols=178 Identities=17% Similarity=0.251 Sum_probs=146.6
Q ss_pred eeeccCCCCCCCCccCCcEEEEEcCCCCCCCcEEEEEECC--CCcEEEcCCCC-ccccceeeEEECCEEEEEecc-C---
Q psy9769 303 TLVRTPRTKPRQPLRVPKVMLVVGGQAPKAIRSVECYDFK--TERWQSVAEMP-TRRCRAGLVFLHEKVYAVGGF-N--- 375 (1026)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~--~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~-~--- 375 (1026)
+.+|.+|..+.+ +..++.||++||.+. +++++||+. +++|+.+++|| .+|.+|++++++++||++||. +
T Consensus 4 ~~lP~~r~~~~~-~~~~~~iyv~GG~~~---~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~ 79 (357)
T 2uvk_A 4 PETPVPFKSGTG-AIDNDTVYIGLGSAG---TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSE 79 (357)
T ss_dssp CCCSSCCCSCEE-EEETTEEEEECGGGT---TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTT
T ss_pred CCCCccccceEE-EEECCEEEEEeCcCC---CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCC
Confidence 345556654433 335899999999753 489999998 49999999999 899999999999999999998 2
Q ss_pred ------CCeEEEeCCCCeEEeCCCCc-CCcceeEEEEECCEEEEEeccCCC-----------------------------
Q psy9769 376 ------GSLRVYDPSTNEWSSAPPME-ARRSTLGVAVLNSLIYAVGGFDGS----------------------------- 419 (1026)
Q Consensus 376 ------~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~----------------------------- 419 (1026)
+++++||+.+++|+.+++|+ .+|.+|++++++++||++||.++.
T Consensus 80 ~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (357)
T 2uvk_A 80 GLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDK 159 (357)
T ss_dssp SCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred ccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccc
Confidence 37999999999999999998 999999999999999999998643
Q ss_pred -----CCCCEEEEEECCCCcEEEccCCCCCcce-eEEEEECCEEEEEeCCC-------ceeeEEc--CcccEEEeecCCC
Q psy9769 420 -----SGLNSAEVYDPSTEKWNMIAPMSTRRSS-VGVGVLNGCLYAENLDG-------RILGCVK--EITDWGLIIELPN 484 (1026)
Q Consensus 420 -----~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~-------~~~~~~~--~~~~W~~~~~lP~ 484 (1026)
..++++++||+.+++|+.++++|.+|.. |++++++++||++||.. .+..|+. .+++|+.+.+||.
T Consensus 160 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~ 239 (357)
T 2uvk_A 160 KAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS 239 (357)
T ss_dssp CGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST
T ss_pred cccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC
Confidence 2468999999999999999999987555 99999999999999942 3344543 5677887777654
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.98 E-value=8.9e-31 Score=289.28 Aligned_cols=188 Identities=36% Similarity=0.648 Sum_probs=163.7
Q ss_pred cccceeeeeccCCCCCCCCccCCcEEEEEcCCCC-CCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC
Q psy9769 297 GEVNKLTLVRTPRTKPRQPLRVPKVMLVVGGQAP-KAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN 375 (1026)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 375 (1026)
..|..+..++.+|..+.. +..++.||++||.+. ...+++++||+.+++|+.+++||.+|.+|++++++++||++||.+
T Consensus 40 ~~W~~~~~~p~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 118 (302)
T 2xn4_A 40 ERWHQVAELPSRRCRAGM-VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFD 118 (302)
T ss_dssp TEEEEECCCSSCCBSCEE-EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEC
T ss_pred CcEeEcccCCcccccceE-EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCC
Confidence 345555556666665554 345899999999763 457899999999999999999999999999999999999999986
Q ss_pred C-----CeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCC--CCCEEEEEECCCCcEEEccCCCCCccee
Q psy9769 376 G-----SLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSS--GLNSAEVYDPSTEKWNMIAPMSTRRSSV 448 (1026)
Q Consensus 376 ~-----~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 448 (1026)
+ ++++||+.+++|+.+++||.+|..|++++++++||++||.++.. .++++++||+.+++|+.++++|.+|..|
T Consensus 119 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 198 (302)
T 2xn4_A 119 GSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA 198 (302)
T ss_dssp SSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc
Confidence 4 68899999999999999999999999999999999999987654 3789999999999999999999999999
Q ss_pred EEEEECCEEEEEeCCC------ceeeEEcCcccEEEeecCCCc
Q psy9769 449 GVGVLNGCLYAENLDG------RILGCVKEITDWGLIIELPNF 485 (1026)
Q Consensus 449 ~~~~~~~~lyv~GG~~------~~~~~~~~~~~W~~~~~lP~~ 485 (1026)
++++++++||++||.. .+..||..+++|+.+.++|.+
T Consensus 199 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 199 GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 9999999999999953 466788888999999887764
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.98 E-value=9.6e-31 Score=289.59 Aligned_cols=189 Identities=26% Similarity=0.447 Sum_probs=166.2
Q ss_pred cccceeeeeccCCCCCCCCccCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC-
Q psy9769 297 GEVNKLTLVRTPRTKPRQPLRVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN- 375 (1026)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~- 375 (1026)
..|..+..++.+|..+... ..++.||++||.+...++++++||+.+++|+.+++||.+|.+|++++++++||++||.+
T Consensus 34 ~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 112 (306)
T 3ii7_A 34 YSWTDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEV 112 (306)
T ss_dssp TEEEECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBT
T ss_pred CCEecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCC
Confidence 4566555566666665544 36889999999876678999999999999999999999999999999999999999986
Q ss_pred -----CCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCC----CCEEEEEECCCCcEEEccCCCCCcc
Q psy9769 376 -----GSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSG----LNSAEVYDPSTEKWNMIAPMSTRRS 446 (1026)
Q Consensus 376 -----~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~p~~r~ 446 (1026)
+++++||+.+++|+.+++||.+|..|++++++++||++||.++... ++++++||+.+++|+.++++|.+|.
T Consensus 113 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 192 (306)
T 3ii7_A 113 GNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK 192 (306)
T ss_dssp TBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh
Confidence 3699999999999999999999999999999999999999876655 8999999999999999999999999
Q ss_pred eeEEEEECCEEEEEeCC------CceeeEEcCcccEEEeecCCCcc
Q psy9769 447 SVGVGVLNGCLYAENLD------GRILGCVKEITDWGLIIELPNFL 486 (1026)
Q Consensus 447 ~~~~~~~~~~lyv~GG~------~~~~~~~~~~~~W~~~~~lP~~~ 486 (1026)
.|++++++++||++||. ..+..||..+++|+.++++|.++
T Consensus 193 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 193 NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 99999999999999994 34567888889999998887643
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.97 E-value=2.7e-30 Score=286.16 Aligned_cols=261 Identities=32% Similarity=0.496 Sum_probs=216.5
Q ss_pred CCCCccccceeeEEECCEEEEEeccC----CCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEecc----CCCCC
Q psy9769 350 AEMPTRRCRAGLVFLHEKVYAVGGFN----GSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGF----DGSSG 421 (1026)
Q Consensus 350 ~~~p~~r~~~~~~~~~~~iyv~GG~~----~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~----~~~~~ 421 (1026)
.+-|.+|..|+++.+++.||++||.+ +++++||+.+++|+.++++|.+|.+|++++++++||++||. ++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp ------------CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred ccCCeeeCCccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 34577899999999999999999974 37899999999999999999999999999999999999998 55556
Q ss_pred CCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCC------CceeeEEcCcccEEEeecCCCcccceEEEeee
Q psy9769 422 LNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLD------GRILGCVKEITDWGLIIELPNFLSASVHITEI 495 (1026)
Q Consensus 422 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~------~~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~ 495 (1026)
++++++||+.+++|+.+++||.+|..|++++++++||++||. ..+..||..+++|+.++++|.++.+...
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---- 164 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGV---- 164 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEE----
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEE----
Confidence 789999999999999999999999999999999999999993 3456788888899998888764311110
Q ss_pred ccccccchhhccCCccccccccccccCCCcEEEEEEEEeeecccCceeeEEeeccccccccccccccccCcccccccccc
Q psy9769 496 SDVYSDLLEKYSNGTIEEIPELSNLFSIGDLVVAKILECVTNNLGQKQIKASLNPHHVNEMYINTTLETGLVLPACVHSK 575 (1026)
Q Consensus 496 ~d~~~~~~~~~~~~~~~~~~~~~~~~~vG~~v~~~v~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv 575 (1026)
T Consensus 165 -------------------------------------------------------------------------------- 164 (308)
T 1zgk_A 165 -------------------------------------------------------------------------------- 164 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeeeecccceeeeeeccccccCceEEEEEeeeeeccceeEEEEechHHHHhhhccCCCcccccccccCCceEEeee
Q psy9769 576 EDHGYLLDVGVKNTRAFIKYDSVILGQIVTCMISKIKVAASMSILEVTLDEELIRSANRLSPSQVSLLNLVPGMKVIANI 655 (1026)
Q Consensus 576 ~d~g~~v~~G~~~~~gf~~~~~~~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V 655 (1026)
T Consensus 165 -------------------------------------------------------------------------------- 164 (308)
T 1zgk_A 165 -------------------------------------------------------------------------------- 164 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccCCcceeeccccceeeccCcccccchhhhhhcccccccccceeeeeccccceEEeechhhhhhcccCCCCcceeeee
Q psy9769 656 CQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEALLERQTGRPEFSVCISI 735 (1026)
Q Consensus 656 ~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~ 735 (1026)
T Consensus 165 -------------------------------------------------------------------------------- 164 (308)
T 1zgk_A 165 -------------------------------------------------------------------------------- 164 (308)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeeeeccccccccccCccCCCCccccccccCCCCeEEEeccccCCCccccceEEEecCCCCeeEEcccccccccCce
Q psy9769 736 VKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNAELSTIGVGGYDGISRQCLSSVEMYSPERNTWEPVKDMLYKRSGAG 815 (1026)
Q Consensus 736 ~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~ 815 (1026)
...++++|++||.++... +++++.||+.+++|+.+++++.+|..+.
T Consensus 165 --------------------------------~~~~~~iyv~GG~~~~~~--~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 210 (308)
T 1zgk_A 165 --------------------------------AVLNRLLYAVGGFDGTNR--LNSAECYYPERNEWRMITAMNTIRSGAG 210 (308)
T ss_dssp --------------------------------EEETTEEEEECCBCSSCB--CCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred --------------------------------EEECCEEEEEeCCCCCCc--CceEEEEeCCCCeEeeCCCCCCccccce
Confidence 001127899999887654 8999999999999999999999999999
Q ss_pred EEEECCEEEEEccCCCCcccceeEEeeCCCCCeeecCCcccccccceEEeecceeeEeeCceeeeeEeEEEEe
Q psy9769 816 VGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSGVPDMALCRRNAVLESVASTAEVNLGDEVSCVVKGISVR 888 (1026)
Q Consensus 816 ~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~g~v~~i~~~ 888 (1026)
+..+++++|++||.++.....+++.||+++++|+.+..++.+|..+.+....+.+++.||........++..|
T Consensus 211 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y 283 (308)
T 1zgk_A 211 VCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECY 283 (308)
T ss_dssp EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEE
T ss_pred EEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEE
Confidence 9999999999999988778899999999999999999999999999999999999999997765555555544
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=286.32 Aligned_cols=170 Identities=25% Similarity=0.380 Sum_probs=151.3
Q ss_pred cCCcEEEEEcCCC-------CCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC--------CCeEEE
Q psy9769 317 RVPKVMLVVGGQA-------PKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN--------GSLRVY 381 (1026)
Q Consensus 317 ~~~~~i~v~GG~~-------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--------~~~~~y 381 (1026)
..++.||++||.. ....+++++||+.+++|+.+++||.+|.+|++++++++||++||.+ +++++|
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEE
Confidence 4688999999951 1224569999999999999999999999999999999999999963 369999
Q ss_pred eCCCCeEEeCCCCcCCcceeEEEEECCEEEEEecc-CCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEE
Q psy9769 382 DPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGF-DGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAE 460 (1026)
Q Consensus 382 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~ 460 (1026)
|+.+++|+.++++|.+|++|++++++++||++||. .+...++++++||+.+++|+.+++||.+|..|++++++++||++
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 202 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVA 202 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred CCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEE
Confidence 99999999999999999999999999999999998 45556899999999999999999999999999999999999999
Q ss_pred eCCC------ceeeEEcCcccEEEeecCCCcc
Q psy9769 461 NLDG------RILGCVKEITDWGLIIELPNFL 486 (1026)
Q Consensus 461 GG~~------~~~~~~~~~~~W~~~~~lP~~~ 486 (1026)
||.+ .+..||..+++|+.++++|.++
T Consensus 203 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 234 (315)
T 4asc_A 203 AGVTDTGLTSSAEVYSITDNKWAPFEAFPQER 234 (315)
T ss_dssp EEECSSSEEEEEEEEETTTTEEEEECCCSSCC
T ss_pred eccCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 9953 3566888889999998887644
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.8e-29 Score=285.86 Aligned_cols=137 Identities=18% Similarity=0.255 Sum_probs=122.1
Q ss_pred EcCCCCccccceeeEEECCEEEEEeccC-CCeEEEeCC--CCeEEeCCCCc-CCcceeEEEEECCEEEEEecc-C----C
Q psy9769 348 SVAEMPTRRCRAGLVFLHEKVYAVGGFN-GSLRVYDPS--TNEWSSAPPME-ARRSTLGVAVLNSLIYAVGGF-D----G 418 (1026)
Q Consensus 348 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~yd~~--~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~-~----~ 418 (1026)
.+++||.+|.+|++++++++||++||.+ +++++||+. +++|+.+++|| .+|.+|++++++++||++||. + .
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~ 81 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGL 81 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCcc
Confidence 4789999999999999999999999986 479999998 49999999999 899999999999999999998 3 1
Q ss_pred CCCCCEEEEEECCCCcEEEccCCC-CCcceeEEEEECCEEEEEeCCC---------------------------------
Q psy9769 419 SSGLNSAEVYDPSTEKWNMIAPMS-TRRSSVGVGVLNGCLYAENLDG--------------------------------- 464 (1026)
Q Consensus 419 ~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~--------------------------------- 464 (1026)
...++++++||+.+++|+.+++|+ .+|..|++++++++||++||.+
T Consensus 82 ~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (357)
T 2uvk_A 82 TQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKA 161 (357)
T ss_dssp EEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCG
T ss_pred ceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccc
Confidence 234789999999999999999998 9999999999999999999953
Q ss_pred -------ceeeEEcCcccEEEeecCCC
Q psy9769 465 -------RILGCVKEITDWGLIIELPN 484 (1026)
Q Consensus 465 -------~~~~~~~~~~~W~~~~~lP~ 484 (1026)
.+..||..+++|+.++++|.
T Consensus 162 ~~~~~~~~v~~yd~~~~~W~~~~~~p~ 188 (357)
T 2uvk_A 162 EDYFFNKFLLSFDPSTQQWSYAGESPW 188 (357)
T ss_dssp GGGCCCCEEEEEETTTTEEEEEEECSS
T ss_pred cccCCcccEEEEeCCCCcEEECCCCCC
Confidence 45668888899999988875
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.97 E-value=2.1e-29 Score=280.48 Aligned_cols=171 Identities=25% Similarity=0.442 Sum_probs=149.7
Q ss_pred ccCCcEEEEEcCCC----C---CCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccC-------CCeEEE
Q psy9769 316 LRVPKVMLVVGGQA----P---KAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN-------GSLRVY 381 (1026)
Q Consensus 316 ~~~~~~i~v~GG~~----~---~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-------~~~~~y 381 (1026)
+..++.||++||.. . ...+.+++||+.+++|+.+++||.+|.+|++++++++||++||.+ +++++|
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEE
Confidence 34689999999952 1 123459999999999999999999999999999999999999975 258999
Q ss_pred eCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCC-CCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEE
Q psy9769 382 DPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDG-SSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAE 460 (1026)
Q Consensus 382 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~ 460 (1026)
|+.+++|+.++++|.+|.+|++++++++||++||.+. ...++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 133 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 212 (318)
T 2woz_A 133 DPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIA 212 (318)
T ss_dssp ETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred eCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEE
Confidence 9999999999999999999999999999999999843 345789999999999999999999999999999999999999
Q ss_pred eCCC------ceeeEEcCcccEEEeecCCCcc
Q psy9769 461 NLDG------RILGCVKEITDWGLIIELPNFL 486 (1026)
Q Consensus 461 GG~~------~~~~~~~~~~~W~~~~~lP~~~ 486 (1026)
||.. .+..||..+++|+.+.++|.++
T Consensus 213 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 213 GGVTEDGLSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp EEEETTEEEEEEEEEETTTCCEEECCCCSSCC
T ss_pred cCcCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 9942 3456777888899988887643
No 16
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=270.19 Aligned_cols=248 Identities=31% Similarity=0.515 Sum_probs=214.3
Q ss_pred EECCEEEEEec-cC-----CCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--
Q psy9769 363 FLHEKVYAVGG-FN-----GSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK-- 434 (1026)
Q Consensus 363 ~~~~~iyv~GG-~~-----~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-- 434 (1026)
.+++.||++|| .+ +++++||+.+++|+.++++|.+|.+|+++.++++||++||.++....+++++||+.+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 46899999999 43 37899999999999999999999999999999999999999877778999999999999
Q ss_pred -EEEccCCCCCcceeEEEEECCEEEEEeCCC------ceeeEEcCcccEEEeecCCCcccceEEEeeeccccccchhhcc
Q psy9769 435 -WNMIAPMSTRRSSVGVGVLNGCLYAENLDG------RILGCVKEITDWGLIIELPNFLSASVHITEISDVYSDLLEKYS 507 (1026)
Q Consensus 435 -W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~------~~~~~~~~~~~W~~~~~lP~~~~g~~~~~~~~d~~~~~~~~~~ 507 (1026)
|+.++++|.+|..|++++++++||++||.. .+..||..+++|+.++++|.++.+...
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~---------------- 155 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL---------------- 155 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE----------------
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE----------------
Confidence 999999999999999999999999999943 456688888899999888764311110
Q ss_pred CCccccccccccccCCCcEEEEEEEEeeecccCceeeEEeeccccccccccccccccCcccccccccccccceeeeeccc
Q psy9769 508 NGTIEEIPELSNLFSIGDLVVAKILECVTNNLGQKQIKASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVK 587 (1026)
Q Consensus 508 ~~~~~~~~~~~~~~~vG~~v~~~v~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~ 587 (1026)
T Consensus 156 -------------------------------------------------------------------------------- 155 (301)
T 2vpj_A 156 -------------------------------------------------------------------------------- 155 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeeeccccccCceEEEEEeeeeeccceeEEEEechHHHHhhhccCCCcccccccccCCceEEeeeecccCCcceeec
Q psy9769 588 NTRAFIKYDSVILGQIVTCMISKIKVAASMSILEVTLDEELIRSANRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKL 667 (1026)
Q Consensus 588 ~~~gf~~~~~~~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~ 667 (1026)
T Consensus 156 -------------------------------------------------------------------------------- 155 (301)
T 2vpj_A 156 -------------------------------------------------------------------------------- 155 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeeccCcccccchhhhhhcccccccccceeeeeccccceEEeechhhhhhcccCCCCcceeeeeceeeeeeecccc
Q psy9769 668 KNTQFKAFISPEAMSTAYNAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEALLERQTGRPEFSVCISIVKKTIFEDSSVS 747 (1026)
Q Consensus 668 ~~~~~~gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~l~~~~~~~~~~~~~~~~~~g~v~~~~~v~ 747 (1026)
T Consensus 156 -------------------------------------------------------------------------------- 155 (301)
T 2vpj_A 156 -------------------------------------------------------------------------------- 155 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCccCCCCccccccccCCCCeEEEeccccCCCccccceEEEecCCCCeeEEcccccccccCceEEEECCEEEEEc
Q psy9769 748 GTEAVNQNCSRPSFKREKSSRNAELSTIGVGGYDGISRQCLSSVEMYSPERNTWEPVKDMLYKRSGAGVGVLDNILYAVG 827 (1026)
Q Consensus 748 ~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~i~v~G 827 (1026)
...++++|++||.++.. ..++++.||+.+++|+.+++++.+|..|.+...++++|++|
T Consensus 156 --------------------~~~~~~iyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 213 (301)
T 2vpj_A 156 --------------------VVASGVIYCLGGYDGLN--ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVG 213 (301)
T ss_dssp --------------------EEETTEEEEECCBCSSC--BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred --------------------EEECCEEEEECCCCCCc--ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEe
Confidence 00112789999988764 48999999999999999999999999999999999999999
Q ss_pred cCCCCcccceeEEeeCCCCCeeecCCcccccccceEEeecceeeEeeCceeeeeEeEEEEe
Q psy9769 828 GHDGPLVRKSVEAYDPETQTWSGVPDMALCRRNAVLESVASTAEVNLGDEVSCVVKGISVR 888 (1026)
Q Consensus 828 g~~~~~~~~~v~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~g~v~~i~~~ 888 (1026)
|.++.....+++.||+++++|+.+..++.+|..+.+..+.+.+++.||........++..|
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y 274 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECY 274 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEE
T ss_pred CCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEE
Confidence 9988777899999999999999999999999999999999999999997765544555544
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=9.5e-30 Score=311.30 Aligned_cols=220 Identities=13% Similarity=0.141 Sum_probs=168.2
Q ss_pred HHhcChhHHHHHHHHHHhhcccCCCCHHHHHhhccccceeccCc---cchhhHHHHhheeeeeeccccceeeee-ccCCC
Q psy9769 235 WVNYDLESRQKHVAELMEYVRLPLLSEDYLIQRVEEETVFKNDI---RCKDYLIEALKYHILVKKGEVNKLTLV-RTPRT 310 (1026)
Q Consensus 235 Wi~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~~~~~~l~~~~~---~~~~~i~~a~~~~~~~~~~~~~~~~~~-~~~~~ 310 (1026)
|+.++...|...+..+++.+||++|.+.++.......+.+.... .|...... . .. ......+... ..|..
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~--~--~~--~~~~~~~~~~~~~p~r 388 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI--N--LT--VDEDYQLLECECPINR 388 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C--C--CE--ECSSEEEEECCCTTCC
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc--c--CC--CCCceeEeccCCCCCC
Confidence 89888888888888888899998777766665555544444333 33222100 0 00 0000111111 11222
Q ss_pred CCCCCccCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcC-C-----CCccccceeeEEE--CCEEEEEeccC------C
Q psy9769 311 KPRQPLRVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVA-E-----MPTRRCRAGLVFL--HEKVYAVGGFN------G 376 (1026)
Q Consensus 311 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~-~-----~p~~r~~~~~~~~--~~~iyv~GG~~------~ 376 (1026)
+..+.+..++.||++||.+...++++++||+.+++|+.++ + ||.+|.+|+++++ +++||++||.+ +
T Consensus 389 r~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~ 468 (695)
T 2zwa_A 389 KFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLS 468 (695)
T ss_dssp BSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCC
T ss_pred ceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccc
Confidence 2222233689999999986666789999999999999988 5 8899999999999 99999999975 3
Q ss_pred CeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC---CCCCcceeEEEE
Q psy9769 377 SLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP---MSTRRSSVGVGV 452 (1026)
Q Consensus 377 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~ 452 (1026)
++++||+.+++|+.+++||.+|++|+++++ +++||++||.++.. ++++||+.+++|+.+++ +|.+|.+|++++
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence 689999999999999999999999999996 99999999987655 89999999999999986 899999999888
Q ss_pred EC---CEEEEEeCC
Q psy9769 453 LN---GCLYAENLD 463 (1026)
Q Consensus 453 ~~---~~lyv~GG~ 463 (1026)
++ ++||++||.
T Consensus 546 ~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 546 FDPVSKQGIILGGG 559 (695)
T ss_dssp EETTTTEEEEECCB
T ss_pred EeCCCCEEEEECCc
Confidence 87 899999983
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=1.2e-27 Score=292.95 Aligned_cols=173 Identities=17% Similarity=0.247 Sum_probs=136.4
Q ss_pred eeccCCCCCCCCccC-CcEEEEEcCCCCC-------CCcEEEEEECCCCcEEEcCCCCcccccee--eE-EECCEEEEEe
Q psy9769 304 LVRTPRTKPRQPLRV-PKVMLVVGGQAPK-------AIRSVECYDFKTERWQSVAEMPTRRCRAG--LV-FLHEKVYAVG 372 (1026)
Q Consensus 304 ~~~~~~~~~~~~~~~-~~~i~v~GG~~~~-------~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~-~~~~~iyv~G 372 (1026)
..+.|+..+...+.. +++||++||.+.. ....+++||+.+++|+.+++||.+|..++ ++ ..+++||++|
T Consensus 181 ~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~G 260 (656)
T 1k3i_A 181 TIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTG 260 (656)
T ss_dssp EEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEEC
T ss_pred eccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeC
Confidence 344566444444433 8899999997532 23579999999999999999998887665 33 3589999999
Q ss_pred ccC-CCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCEEEEEec-cCCCCCCCEEEEEECCCCcEEEc-----cCCCCC
Q psy9769 373 GFN-GSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSLIYAVGG-FDGSSGLNSAEVYDPSTEKWNMI-----APMSTR 444 (1026)
Q Consensus 373 G~~-~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~yd~~~~~W~~~-----~~~p~~ 444 (1026)
|++ .++++||+.+++|+.+++||.+|.+|+++++ +|+||++|| .++...++++++||+.+++|+.+ ++|+.+
T Consensus 261 G~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~ 340 (656)
T 1k3i_A 261 GNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA 340 (656)
T ss_dssp SSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC
T ss_pred CCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc
Confidence 975 4899999999999999999999999999999 999999999 45556789999999999999997 456666
Q ss_pred cceeEEEEECCEEEEEeCCC----------ceeeEEcCcccEE
Q psy9769 445 RSSVGVGVLNGCLYAENLDG----------RILGCVKEITDWG 477 (1026)
Q Consensus 445 r~~~~~~~~~~~lyv~GG~~----------~~~~~~~~~~~W~ 477 (1026)
|.. +++..++++|++||.+ .+.+||+.+++|.
T Consensus 341 ~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 341 DKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp CTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred ccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCccee
Confidence 554 5556799999999843 2345666666654
No 19
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=231.42 Aligned_cols=154 Identities=30% Similarity=0.442 Sum_probs=143.3
Q ss_pred chHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhheecc
Q psy9769 48 HTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYVYSC 126 (1026)
Q Consensus 48 ~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg 126 (1026)
+++.+.+.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.|+....|.++++++++|+.+|+|||+|
T Consensus 17 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 17 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCC
Confidence 4457889999999999999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred eeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhhheeccc
Q psy9769 127 EIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRAFADLHSCLDLLSTAENYIELHFAEIVECE 201 (1026)
Q Consensus 127 ~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~l~~~~ 201 (1026)
++.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|..|++..|.+.|.+||.+||.++++++
T Consensus 97 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 171 (172)
T 3htm_A 97 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 171 (172)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred CCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998764
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.90 E-value=1.1e-23 Score=232.53 Aligned_cols=154 Identities=30% Similarity=0.442 Sum_probs=138.1
Q ss_pred chHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhheecc
Q psy9769 48 HTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYVYSC 126 (1026)
Q Consensus 48 ~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg 126 (1026)
+++.+.+.|.++++++.+|||+|.++|+.|+|||.|||++|+||++||. +|.|+...+|.|+++++++|+.+|+|||++
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCC
Confidence 3456889999999999999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred eeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhhheeccc
Q psy9769 127 EIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRAFADLHSCLDLLSTAENYIELHFAEIVECE 201 (1026)
Q Consensus 127 ~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~l~~~~ 201 (1026)
.++++.+++.+|+.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.|++..|.+.|++||..||.++++++
T Consensus 237 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 237 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred CCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988764
No 21
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=3e-24 Score=208.50 Aligned_cols=136 Identities=31% Similarity=0.428 Sum_probs=106.2
Q ss_pred chHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhheecc
Q psy9769 48 HTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYVYSC 126 (1026)
Q Consensus 48 ~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg 126 (1026)
+++.+.+.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.|+....|.++++++++|+.+|+|||+|
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 3457889999999999999999999999999999999999999999999 889988899999999999999999999999
Q ss_pred eeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHHhhhhcCchhHH
Q psy9769 127 EIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRAFADLHSCLDLL 183 (1026)
Q Consensus 127 ~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~~a~~~~~~~L~ 183 (1026)
.+.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.|++.+|.
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 88 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred ccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 999999999999999999999999999999999999999999999999999998875
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.89 E-value=1.6e-22 Score=247.41 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=115.7
Q ss_pred EEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCC-----------CeEEEeCCCCeEEeCCCCcCCccee
Q psy9769 335 SVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNG-----------SLRVYDPSTNEWSSAPPMEARRSTL 401 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~-----------~~~~yd~~~~~W~~~~~~p~~r~~~ 401 (1026)
++.+|||.+++|..+++||. ..++++++ +++||++||.+. .+++||+.+++|+.+++||.+|..+
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~--~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI--VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS--CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred ccccCCCCCCeeeeeccCCC--CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 36789999999999988876 44555656 999999999643 4788999999999999998888655
Q ss_pred E--EEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCC-------CceeeEE
Q psy9769 402 G--VAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLD-------GRILGCV 470 (1026)
Q Consensus 402 ~--~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~-------~~~~~~~ 470 (1026)
+ +++ .+++||++||.+.. ++++||+.+++|+.+++||.+|..|+++++ +++|||+||. .....||
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 3 333 58999999997653 799999999999999999999999999999 9999999993 2345677
Q ss_pred cCcccEEEe
Q psy9769 471 KEITDWGLI 479 (1026)
Q Consensus 471 ~~~~~W~~~ 479 (1026)
+.+++|+.+
T Consensus 321 ~~t~~W~~~ 329 (656)
T 1k3i_A 321 PSSKTWTSL 329 (656)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcceeC
Confidence 777888877
No 23
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.88 E-value=9.1e-23 Score=195.28 Aligned_cols=127 Identities=25% Similarity=0.566 Sum_probs=118.3
Q ss_pred CCCCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEec-CCCHHHH
Q psy9769 39 EKPPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLK-GVDPNAL 116 (1026)
Q Consensus 39 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~-~~~~~~f 116 (1026)
....+....|++.+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.+. ..|.++ ++++++|
T Consensus 10 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~ 87 (138)
T 2z8h_A 10 AVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGF 87 (138)
T ss_dssp CCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHH
T ss_pred CeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHH
Confidence 3446778899999999999999999999999999999999999999999999999999 67653 578895 8999999
Q ss_pred HHHhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcch
Q psy9769 117 KLLIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNC 167 (1026)
Q Consensus 117 ~~~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~ 167 (1026)
+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|.+||..+++.+|+
T Consensus 88 ~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sna 138 (138)
T 2z8h_A 88 EPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDSTS 138 (138)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCCC
T ss_pred HHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcccccC
Confidence 999999999999999999999999999999999999999999999988774
No 24
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.88 E-value=1.3e-22 Score=191.51 Aligned_cols=120 Identities=27% Similarity=0.545 Sum_probs=114.2
Q ss_pred CCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEe-cCCCHHHHHH
Q psy9769 41 PPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVL-KGVDPNALKL 118 (1026)
Q Consensus 41 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l-~~~~~~~f~~ 118 (1026)
..+..+.|++.+++.|+++++++.+|||+|.++|++|+|||.||+++|+||++||. ++.| ....|.| +++++++|+.
T Consensus 5 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ 83 (127)
T 1r29_A 5 SQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNI 83 (127)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999 8888 7789999 9999999999
Q ss_pred HhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcc
Q psy9769 119 LIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQ 161 (1026)
Q Consensus 119 ~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~ 161 (1026)
+|+|||||++.++.+++.+|+.+|++|+++.|++.|+++|.++
T Consensus 84 ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 84 LLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999753
No 25
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.88 E-value=8.9e-23 Score=196.31 Aligned_cols=124 Identities=28% Similarity=0.572 Sum_probs=111.4
Q ss_pred CCCCCCCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCcc--CcccEEEecCCC
Q psy9769 36 GTREKPPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEE--SKQERIVLKGVD 112 (1026)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e--~~~~~i~l~~~~ 112 (1026)
.-.+...+.++.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.+ +....|.+++++
T Consensus 18 ~~~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~ 97 (144)
T 2ppi_A 18 LYFQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS 97 (144)
T ss_dssp -CCCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC
T ss_pred eeeeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC
Confidence 3445567889999999999999999999999999999999999999999999999999999 7765 677899999999
Q ss_pred HHHHHHHhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhh
Q psy9769 113 PNALKLLIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQ 159 (1026)
Q Consensus 113 ~~~f~~~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~ 159 (1026)
+++|+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.
T Consensus 98 ~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 98 VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999874
No 26
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.88 E-value=1.4e-22 Score=189.38 Aligned_cols=117 Identities=35% Similarity=0.589 Sum_probs=107.7
Q ss_pred ccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhh
Q psy9769 43 YRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLID 121 (1026)
Q Consensus 43 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~ 121 (1026)
...+.|++.+++.|+++++++.+|||+|.++|++|+|||.||+++|+||++||. ++.|+....|.++++++++|+.+|+
T Consensus 3 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~ 82 (120)
T 2if5_A 3 IPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMD 82 (120)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHH
Confidence 345689999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred heecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhh
Q psy9769 122 YVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQ 159 (1026)
Q Consensus 122 ~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~ 159 (1026)
|||||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 83 ~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 83 FAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999873
No 27
>3go5_A Multidomain protein with S1 RNA-binding domains; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Streptococcus pneumoniae}
Probab=99.87 E-value=5.3e-22 Score=209.72 Aligned_cols=136 Identities=12% Similarity=0.013 Sum_probs=108.5
Q ss_pred EeeCceeeeeEeEEE-EeeeEEEeccceeeeecccce-eeCCccccccCcEEe------ecCeEEEehhhh-hcccCCCC
Q psy9769 872 VNLGDEVSCVVKGIS-VRGVIAQVGYYKLKATCENEY-VEGNKADIKVGDEVQ------AKNSIEVAFKSL-YRIAQPLT 942 (1026)
Q Consensus 872 ~~~G~~~~g~v~~i~-~~g~~v~l~~~~~~~~~~~~~-~~~~~~~~kvG~~v~------~~~~i~ls~K~l-~~~~~~~~ 942 (1026)
+..|+.+.|+|++++ +||+||+++.-+.++|+|.+- .......+++||++. .++||.+|+|+. ..++| .
T Consensus 67 ~~~G~~~~g~V~~v~~~~GaFVdiG~~~~d~lvp~sel~~~~~~~~~~Gd~v~v~l~iD~~~Ri~ls~k~~~~~~~~--~ 144 (285)
T 3go5_A 67 ATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRL--A 144 (285)
T ss_dssp SCSSSCEEEEEEEEETTTEEEEECSCTTCCEEEEGGGSCSSGGGSCCTTCEEEEEEEECTTSCEEEEECCHHHHHHH--C
T ss_pred ccCCCEEEEEEEEEccCceEEEEECCCCcEEEEEHHHCCcccccccCCCCEEEEEEEECCCCcEEEEehhhhhcchh--h
Confidence 346999999999999 899999997315899999943 222234679999975 278999999863 22333 3
Q ss_pred cc-ccCCCCcEEEEEEEEEecceEEE-EeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeechh
Q psy9769 943 SV-KHTKPGRLVWGVLKEKMPGGVRV-EFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLTEA 1017 (1026)
Q Consensus 943 ~~-~~~~~G~~v~G~V~~i~~~G~fV-~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~~~ 1017 (1026)
.. ++.++|++|+|+|.++++||+|| .+.++++||||.||+++ .+++||+|+|+|++||+++.+|+.+
T Consensus 145 ~~~~~~~~G~~V~g~V~~i~~~G~fV~~i~~g~~Glih~SEl~~--------~l~~Gd~v~~~V~~id~~d~kI~LS 213 (285)
T 3go5_A 145 RPAYNNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYA--------EPRLGQVLDARVIGFREVDRTLNLS 213 (285)
T ss_dssp CCCCSCCTTCEEEEEEEEEETTEEEEEETTTTEEEEECGGGCSS--------CCCTTCEEEEEEEEEETTTTEEEEE
T ss_pred hhhhhCCCCCEEEEEEEEEeCCcEEEEEeCCCeEEEEEHHHccc--------cCCCCCEEEEEEEEEECCCCeEEEE
Confidence 33 34467999999999999999999 99999999999999963 4899999999999999966666533
No 28
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.87 E-value=6.3e-22 Score=242.06 Aligned_cols=179 Identities=14% Similarity=0.156 Sum_probs=153.1
Q ss_pred eccCCCCCCCCccC-CcEEEEEcCCCCC--CCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCC--Ce
Q psy9769 305 VRTPRTKPRQPLRV-PKVMLVVGGQAPK--AIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNG--SL 378 (1026)
Q Consensus 305 ~~~~~~~~~~~~~~-~~~i~v~GG~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~ 378 (1026)
++.+|..|...+.. ++.||++||.+.. .++++++||+.+++|+.+++||.+|++|+++++ +++|||+||.++ ++
T Consensus 436 ~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v 515 (695)
T 2zwa_A 436 VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAM 515 (695)
T ss_dssp CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSE
T ss_pred CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCE
Confidence 35556666554433 8999999998642 578999999999999999999999999999997 999999999875 79
Q ss_pred EEEeCCCCeEEeCCC---CcCCcceeEEEEEC---CEEEEEeccCCC--CCCCEEEEEECCCCc------EEEccCC-CC
Q psy9769 379 RVYDPSTNEWSSAPP---MEARRSTLGVAVLN---SLIYAVGGFDGS--SGLNSAEVYDPSTEK------WNMIAPM-ST 443 (1026)
Q Consensus 379 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~iyv~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-p~ 443 (1026)
++||+.+++|+.+++ +|.+|++|++++++ ++||++||.+.. ..++++++||+.+++ |+.++++ +.
T Consensus 516 ~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~ 595 (695)
T 2zwa_A 516 LLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF 595 (695)
T ss_dssp EEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG
T ss_pred EEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC
Confidence 999999999999986 89999999988877 899999998543 457999999999999 9999886 58
Q ss_pred CcceeEEEEEC-CEEEEEeCC---------CceeeEEcCcccEEEeecCCC
Q psy9769 444 RRSSVGVGVLN-GCLYAENLD---------GRILGCVKEITDWGLIIELPN 484 (1026)
Q Consensus 444 ~r~~~~~~~~~-~~lyv~GG~---------~~~~~~~~~~~~W~~~~~lP~ 484 (1026)
+|.+|++++++ ++||++||. ..+..||..+++|.. .++|.
T Consensus 596 ~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~-~~~p~ 645 (695)
T 2zwa_A 596 QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTS-IPISR 645 (695)
T ss_dssp CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEE-CCCCH
T ss_pred CcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEE-eeccc
Confidence 99999999999 999999994 245678889999994 45554
No 29
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=187.79 Aligned_cols=113 Identities=27% Similarity=0.450 Sum_probs=105.3
Q ss_pred ccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhhe
Q psy9769 45 NVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYV 123 (1026)
Q Consensus 45 ~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~ 123 (1026)
.+.|++.+++.|+++++++.+|||+|.++|++|+|||.||+++|+||++||. ++ ...|.++++++++|+.+|+||
T Consensus 4 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 4 FVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999998 54 568999999999999999999
Q ss_pred ecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcc
Q psy9769 124 YSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQ 161 (1026)
Q Consensus 124 Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~ 161 (1026)
|||++.++.+++.+|+.+|++|+++.|++.|++||.+.
T Consensus 80 Ytg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 80 YTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999754
No 30
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.87 E-value=2.4e-22 Score=191.27 Aligned_cols=117 Identities=25% Similarity=0.407 Sum_probs=104.0
Q ss_pred cccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhh
Q psy9769 44 RNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDY 122 (1026)
Q Consensus 44 ~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~ 122 (1026)
.+..|...+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++ ...|.|+++++++|+.+|+|
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~f 79 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDF 79 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999998 55 56799999999999999999
Q ss_pred eecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCC
Q psy9769 123 VYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHP 164 (1026)
Q Consensus 123 ~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~ 164 (1026)
||||++.++.+++.+|+.+|++|+++.|++.|++||.+.+..
T Consensus 80 iYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 80 FYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999987653
No 31
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.86 E-value=1.7e-22 Score=190.16 Aligned_cols=116 Identities=29% Similarity=0.594 Sum_probs=109.7
Q ss_pred CCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecC-CCHHHHHH
Q psy9769 41 PPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKG-VDPNALKL 118 (1026)
Q Consensus 41 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~-~~~~~f~~ 118 (1026)
..+.++.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.+ ...|.+++ +++++|+.
T Consensus 8 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~ 85 (125)
T 3ohu_A 8 YVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGP 85 (125)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHH
T ss_pred eeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999 6766 67899998 99999999
Q ss_pred HhhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhh
Q psy9769 119 LIDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFL 158 (1026)
Q Consensus 119 ~l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l 158 (1026)
+|+|||||++.++.+++.+++.+|++|+++.|++.|++||
T Consensus 86 ~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 86 LLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999875
No 32
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=9.1e-22 Score=183.74 Aligned_cols=116 Identities=27% Similarity=0.492 Sum_probs=109.3
Q ss_pred CccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHHhh
Q psy9769 42 PYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLLID 121 (1026)
Q Consensus 42 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~l~ 121 (1026)
.+..+.|++.+++.|+++++++.+|||+|.++|++|+|||.||+++|+||++||.+ ...+|.++++++++|+.+|+
T Consensus 5 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~~~~f~~ll~ 80 (121)
T 1buo_A 5 QLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHR----NSQHYTLDFLSPKTFQQILE 80 (121)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTS----CCSEEEECSSCHHHHHHHHH
T ss_pred eccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcC----CCcEEEeCCCCHHHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999983 25689999999999999999
Q ss_pred heecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcc
Q psy9769 122 YVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQ 161 (1026)
Q Consensus 122 ~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~ 161 (1026)
|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 81 ~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 81 YAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999754
No 33
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=7e-22 Score=183.20 Aligned_cols=112 Identities=26% Similarity=0.493 Sum_probs=104.5
Q ss_pred cCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEec--CCCHHHHHHHhhhe
Q psy9769 46 VHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLK--GVDPNALKLLIDYV 123 (1026)
Q Consensus 46 ~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~--~~~~~~f~~~l~~~ 123 (1026)
+.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||.+- .+..|.|+ ++++++|+.+|+||
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999832 35678888 99999999999999
Q ss_pred ecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhc
Q psy9769 124 YSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQC 160 (1026)
Q Consensus 124 Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~ 160 (1026)
|||++.++.+++.+++.+|++|+++.|++.|++||.+
T Consensus 80 Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 80 YTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999863
No 34
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.86 E-value=6.3e-22 Score=185.60 Aligned_cols=116 Identities=29% Similarity=0.631 Sum_probs=106.0
Q ss_pred CccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEec-CCCHHHHHHH
Q psy9769 42 PYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLK-GVDPNALKLL 119 (1026)
Q Consensus 42 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~-~~~~~~f~~~ 119 (1026)
.+..+.|++.+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. ++.++ ..|.++ ++++++|+.+
T Consensus 6 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~l 83 (124)
T 2ihc_A 6 AYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPL 83 (124)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHH
T ss_pred eecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHH
Confidence 3556789999999999999999999999999999999999999999999999999 67654 578884 8999999999
Q ss_pred hhheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhh
Q psy9769 120 IDYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQ 159 (1026)
Q Consensus 120 l~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~ 159 (1026)
|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.
T Consensus 84 L~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 84 IQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999985
No 35
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.84 E-value=1.8e-21 Score=183.96 Aligned_cols=115 Identities=25% Similarity=0.482 Sum_probs=102.1
Q ss_pred ccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEec-CCCHHHHHHHh
Q psy9769 43 YRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLK-GVDPNALKLLI 120 (1026)
Q Consensus 43 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~-~~~~~~f~~~l 120 (1026)
...+.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||. + ....|.++ ++++++|+.+|
T Consensus 11 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll 86 (129)
T 3ga1_A 11 MEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQIL 86 (129)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHH
T ss_pred eecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999998 4 56789997 99999999999
Q ss_pred hheecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhcc
Q psy9769 121 DYVYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQ 161 (1026)
Q Consensus 121 ~~~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~ 161 (1026)
+|||||++.++.+++.+|+.+|++|+++.|++.|++||.+.
T Consensus 87 ~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 87 SFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999864
No 36
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.84 E-value=8.6e-22 Score=183.18 Aligned_cols=113 Identities=32% Similarity=0.617 Sum_probs=105.3
Q ss_pred ccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHHhhh
Q psy9769 43 YRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLLIDY 122 (1026)
Q Consensus 43 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~l~~ 122 (1026)
...+.|++.+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||.+ ....|.++++++++|+.+|+|
T Consensus 5 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~----~~~~i~l~~~~~~~f~~ll~~ 80 (119)
T 2q81_A 5 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD----QKDVVHLDISNAAGLGQVLEF 80 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH----CCSGGGGGGCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC----CCCEEEeCCCCHHHHHHHHHH
Confidence 4456789999999999999999999999999999999999999999999999983 234577889999999999999
Q ss_pred eecceeeechhhHHHHHHHHHhcCchhHHhHHHHhhh
Q psy9769 123 VYSCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQ 159 (1026)
Q Consensus 123 ~Ytg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~ 159 (1026)
||||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 81 ~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 81 MYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999986
No 37
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=2.6e-21 Score=177.33 Aligned_cols=103 Identities=36% Similarity=0.539 Sum_probs=94.2
Q ss_pred HHhcCCCccEEEEECC----EEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhheecceeeechh
Q psy9769 59 MRKQNLLCDVKLIADG----VEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEE 133 (1026)
Q Consensus 59 l~~~~~~~Dv~i~v~~----~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~ 133 (1026)
|++++.+|||+|.+++ +.|+|||.||+++|+||++||. +|.|+. ..|.++++++++|+.+|+|||+|++.++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 6789999999999998 9999999999999999999999 899888 999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCchhHHhHHHHhhhccc
Q psy9769 134 NVQMLLPAANLLQLTDVRDACCDFLQCQL 162 (1026)
Q Consensus 134 ~v~~ll~~A~~l~l~~L~~~c~~~l~~~l 162 (1026)
++.+++.+|++|+++.|++.|.++|.+++
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998653
No 38
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.81 E-value=7.5e-20 Score=168.81 Aligned_cols=109 Identities=24% Similarity=0.446 Sum_probs=101.4
Q ss_pred CCCccccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHH
Q psy9769 40 KPPYRNVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLL 119 (1026)
Q Consensus 40 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~ 119 (1026)
...+.++.|+..+++.|+++++++.+|||+|.++|+.|+|||.||+++|+||++||.+ ....|.++++++++|+.+
T Consensus 6 ~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~----~~~~i~l~~~~~~~f~~~ 81 (116)
T 3fkc_A 6 LISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSV----AGQVVELSFIRAEIFAEI 81 (116)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTS----CCSEEEECSSCHHHHHHH
T ss_pred eeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcC----CCCEEEeCCCCHHHHHHH
Confidence 3456678899999999999999999999999999999999999999999999999983 156899999999999999
Q ss_pred hhheeccee-eechhhHHHHHHHHHhcCchhHHh
Q psy9769 120 IDYVYSCEI-YVTEENVQMLLPAANLLQLTDVRD 152 (1026)
Q Consensus 120 l~~~Ytg~~-~i~~~~v~~ll~~A~~l~l~~L~~ 152 (1026)
|+|+|||++ .++.+++.+++.+|++|+++.|++
T Consensus 82 l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 82 LNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 999999999 799999999999999999999875
No 39
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=5.8e-20 Score=169.86 Aligned_cols=106 Identities=21% Similarity=0.348 Sum_probs=95.5
Q ss_pred ccCchHHHHHHHHHHHhcCCCccEEEEECCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHHhhhee
Q psy9769 45 NVHHTSKAFETMNIMRKQNLLCDVKLIADGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLLIDYVY 124 (1026)
Q Consensus 45 ~~~~~~~l~~~l~~l~~~~~~~Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~l~~~Y 124 (1026)
.+.++..+++.|+ +.++.+|||+|.++|+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|||
T Consensus 12 ~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 12 SPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLLNFVY 81 (119)
T ss_dssp CTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHHHHHT
T ss_pred CCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHHHHHc
Confidence 3446677888886 6789999999999999999999999999999985 34678999999999999999999
Q ss_pred cceeeechhhHHHHHHHHHhcCchhHHhHHHHhhhc
Q psy9769 125 SCEIYVTEENVQMLLPAANLLQLTDVRDACCDFLQC 160 (1026)
Q Consensus 125 tg~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~ 160 (1026)
||++.++.+|+.+++.+|++|+++.|++.|++++..
T Consensus 82 tg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999875
No 40
>3go5_A Multidomain protein with S1 RNA-binding domains; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.40A {Streptococcus pneumoniae}
Probab=99.72 E-value=4.5e-17 Score=172.14 Aligned_cols=200 Identities=8% Similarity=0.011 Sum_probs=159.1
Q ss_pred ccCcccccccccccccceeeeecccceeeeeecccc--ccCceEEEEEeeeeeccceeEEEEechHHHHhhhccCCCccc
Q psy9769 563 ETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDSV--ILGQIVTCMISKIKVAASMSILEVTLDEELIRSANRLSPSQV 640 (1026)
Q Consensus 563 ~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~~--~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~~~~~~~~~~~~ 640 (1026)
..|++++|+|.++++.|++|++| +.+||+|.+++ ++||++++.|.. +.+ .+ +.+|..
T Consensus 5 ~~G~~v~g~V~~~~~~G~fv~~~--g~egllp~se~~~~vGdevev~v~~-d~~--~r-~iat~~--------------- 63 (285)
T 3go5_A 5 NLASFIVGLIIDENDRFYFVQKD--GQTYALAKEEGQHTVGDTVKGFAYT-DMK--QK-LRLTTL--------------- 63 (285)
T ss_dssp TTTEEEEEEEEEECSSEEEEEET--TEEEEEEGGGCCCCTTSEEEEEEEE-CTT--SC-EEEECS---------------
T ss_pred cCCCEEEEEEEEEECCEEEEEcC--CeEEEEEHHHCccccCCEEEEEEEE-CCC--CC-EEEecc---------------
Confidence 36999999999999999999997 78999999887 899999999973 332 22 223321
Q ss_pred ccccccCCceEEeeeeccc-CCcceeecccc-ceeeccCcccccchhhhhhcccccccccceeeeeccccceEEeechhh
Q psy9769 641 SLLNLVPGMKVIANICQQL-PHGWKAKLKNT-QFKAFISPEAMSTAYNAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEA 718 (1026)
Q Consensus 641 ~~~~l~~G~~v~~~V~~v~-~~G~~v~~~~~-~~~gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~ 718 (1026)
...+..|+.+.|+|.++. ++|++|+++ . +..||+|.++++|.....+++|+++ .+. |++|+ ++|+.+|+|+.
T Consensus 64 -~p~~~~G~~~~g~V~~v~~~~GaFVdiG-~~~~d~lvp~sel~~~~~~~~~~Gd~v--~v~-l~iD~-~~Ri~ls~k~~ 137 (285)
T 3go5_A 64 -EVTATQDQFGWGRVTEVRKDLGVFVDTG-LPDKEIVVSLDILPELKELWPKKGDQL--YIR-LEVDK-KDRIWGLLAYQ 137 (285)
T ss_dssp -CCCSCSSSCEEEEEEEEETTTEEEEECS-CTTCCEEEEGGGSCSSGGGSCCTTCEE--EEE-EEECT-TSCEEEEECCH
T ss_pred -cccccCCCEEEEEEEEEccCceEEEEEC-CCCcEEEEEHHHCCcccccccCCCCEE--EEE-EEECC-CCcEEEEehhh
Confidence 123689999999999999 799999994 4 5899999999999877788999999 655 79999 78999999863
Q ss_pred hhhcccCCCCcceeeeeceeeeeeeccccccccccCccCCCCccccccccCCCCeEEEeccccCCCccccceEEEecCCC
Q psy9769 719 LLERQTGRPEFSVCISIVKKTIFEDSSVSGTEAVNQNCSRPSFKREKSSRNAELSTIGVGGYDGISRQCLSSVEMYSPER 798 (1026)
Q Consensus 719 l~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~d~~~ 798 (1026)
-..
T Consensus 138 ~~~----------------------------------------------------------------------------- 140 (285)
T 3go5_A 138 EDF----------------------------------------------------------------------------- 140 (285)
T ss_dssp HHH-----------------------------------------------------------------------------
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 110
Q ss_pred CeeEEcccccccccCceEEEECCEEEEEccCCCCcccceeEEeeCCCCCeeecCCcccccccceEEeecceeeEeeCcee
Q psy9769 799 NTWEPVKDMLYKRSGAGVGVLDNILYAVGGHDGPLVRKSVEAYDPETQTWSGVPDMALCRRNAVLESVASTAEVNLGDEV 878 (1026)
Q Consensus 799 ~~w~~~~~~~~~r~~~~~~~~~~~i~v~Gg~~~~~~~~~v~~~d~~~~~w~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~ 878 (1026)
+.|... ...+..|+.+
T Consensus 141 ~~~~~~----------------------------------------------------------------~~~~~~G~~V 156 (285)
T 3go5_A 141 QRLARP----------------------------------------------------------------AYNNMQNQNW 156 (285)
T ss_dssp HHHCCC----------------------------------------------------------------CCSCCTTCEE
T ss_pred chhhhh----------------------------------------------------------------hhhCCCCCEE
Confidence 011000 0013459999
Q ss_pred eeeEeEEEEeeeEE-EeccceeeeecccceeeCCccccccCcEEee--------cCeEEEehhhh
Q psy9769 879 SCVVKGISVRGVIA-QVGYYKLKATCENEYVEGNKADIKVGDEVQA--------KNSIEVAFKSL 934 (1026)
Q Consensus 879 ~g~v~~i~~~g~~v-~l~~~~~~~~~~~~~~~~~~~~~kvG~~v~~--------~~~i~ls~K~l 934 (1026)
+|+|.++++||+|| .+++ +++||+|.+-.. ..+++||++++ ++||.||+|++
T Consensus 157 ~g~V~~i~~~G~fV~~i~~-g~~Glih~SEl~---~~l~~Gd~v~~~V~~id~~d~kI~LSlk~~ 217 (285)
T 3go5_A 157 PAIVYRLKLSGTFVYLPEN-NMLGFIHPSERY---AEPRLGQVLDARVIGFREVDRTLNLSLKPR 217 (285)
T ss_dssp EEEEEEEETTEEEEEETTT-TEEEEECGGGCS---SCCCTTCEEEEEEEEEETTTTEEEEECSCC
T ss_pred EEEEEEEeCCcEEEEEeCC-CeEEEEEHHHcc---ccCCCCCEEEEEEEEEECCCCeEEEEeChh
Confidence 99999999999999 9988 999999995432 46899999983 78999999995
No 41
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=7.2e-16 Score=138.58 Aligned_cols=96 Identities=28% Similarity=0.452 Sum_probs=92.3
Q ss_pred hhcccCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhhheecccccccCCHhhHhceeccccccccchhhHHHHHHHHHh
Q psy9769 158 LQCQLHPTNCLGIRAFADLHSCLDLLSTAENYIELHFAEIVECEEFLSLSHEQVLGLISSDKLMVSNEEKVFECVIAWVN 237 (1026)
Q Consensus 158 l~~~l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~l~~~~~f~~L~~~~l~~ll~~~~l~v~~E~~v~~av~~Wi~ 237 (1026)
+.++++++||+.++.+|+.|++.+|.+.|.+||.+||.++.++++|.+||.+.|..+|++| +.+|.+||+|+++|++
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~ 80 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWIN 80 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999999999999999999997 7899999999999999
Q ss_pred cChhHHHHHHHHHHhhccc
Q psy9769 238 YDLESRQKHVAELMEYVRL 256 (1026)
Q Consensus 238 ~~~~~r~~~~~~ll~~vr~ 256 (1026)
++++.|.+++++||++||+
T Consensus 81 ~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 81 FNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp TTHHHHHHHHHHHHHHCCE
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999996
No 42
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=99.52 E-value=9.1e-15 Score=132.22 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=66.7
Q ss_pred EEEehhhhhcccCCCCccc-cCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEE
Q psy9769 927 IEVAFKSLYRIAQPLTSVK-HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQIL 1005 (1026)
Q Consensus 927 i~ls~K~l~~~~~~~~~~~-~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl 1005 (1026)
-+-|+|+|..+ ||..+. +.++|+++.|+|++|++||+||+++++++||+|.+++++.++.++.+.|++||+|+|+|+
T Consensus 10 ~~~~iKq~~~~--p~~~~~~~~~~G~iv~G~V~~v~~~G~fV~l~~~~~Gll~~sel~~~~~~~~~~~~~vGd~V~v~V~ 87 (109)
T 2khj_A 10 HSSGLVPRGSH--MFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 87 (109)
T ss_dssp -------------CHHHHTTTCCSSSEEEEEEEEECSSCEEEECSTTCBCCBCTTCCCSSSSSSGGGSCCTTCEEEEEEE
T ss_pred cccchhhcccC--HHHHHhhcCCCCCEEEEEEEEEECCeEEEEECCCCEEEEEHHHcCcccccChhhccCCCCEEEEEEE
Confidence 34589998544 554443 456799999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeee
Q psy9769 1006 KYEDGELLL 1014 (1026)
Q Consensus 1006 ~vd~~~~~~ 1014 (1026)
+||+++.++
T Consensus 88 ~vd~~~~ki 96 (109)
T 2khj_A 88 GVDRKNRAI 96 (109)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCEE
Confidence 999875443
No 43
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=99.46 E-value=1.2e-13 Score=126.00 Aligned_cols=84 Identities=13% Similarity=0.106 Sum_probs=65.2
Q ss_pred EehhhhhcccCCCCcc-ccCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCc-ccccCcccccccCCEEEEEEEE
Q psy9769 929 VAFKSLYRIAQPLTSV-KHTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQ-ATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 929 ls~K~l~~~~~~~~~~-~~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~-~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
-|+|++..+ ||..+ .+.++|+++.|+|+++++||+||+++++++||||.++|++ .++.++.+.|++||.|+|+|++
T Consensus 11 ~~~k~~~~~--p~~~~~~~~~~G~~~~G~V~~v~~~G~FV~l~~~~~Glvhisel~~~~~~~~~~~~~~vGd~V~vkV~~ 88 (115)
T 2khi_A 11 SSGLVPRGS--HWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 88 (115)
T ss_dssp ------------CCCSSCSSCSSCEEEEEEEEEETTEEEEECSTTCEEEEETTSSSCSSTTCSSTTTCCTTCEEEEEEEE
T ss_pred cchhhcccC--CHHHHhhcCCCCCEEEEEEEEEECCEEEEEECCCCEEEEEHHHCCccccccCcccEECCCCEEEEEEEE
Confidence 378886444 55454 4567799999999999999999999999999999999998 4788899999999999999999
Q ss_pred EeCCeeee
Q psy9769 1007 YEDGELLL 1014 (1026)
Q Consensus 1007 vd~~~~~~ 1014 (1026)
+|+++.++
T Consensus 89 vd~~~~rI 96 (115)
T 2khi_A 89 IDEERRRI 96 (115)
T ss_dssp EETTTTEE
T ss_pred EECCCCEE
Confidence 99854443
No 44
>1luz_A Protein K3, protein K2; stranded anti-parallel beta barrel, viral protein; 1.80A {Vaccinia virus} SCOP: b.40.4.5
Probab=99.44 E-value=5.5e-14 Score=120.58 Aligned_cols=73 Identities=5% Similarity=0.107 Sum_probs=65.0
Q ss_pred ccccCCCCcEEEEEEEEEecceEEEEeCC--CceeeEecc-ccCcccccCcccccccCCEEEEEEEEEeCCeeeechh
Q psy9769 943 SVKHTKPGRLVWGVLKEKMPGGVRVEFDG--DISGVFPTS-AMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLTEA 1017 (1026)
Q Consensus 943 ~~~~~~~G~~v~G~V~~i~~~G~fV~~~~--~i~Gl~~~~-~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~~~ 1017 (1026)
.|...++|+++.|+|+ |++||+||+|.+ +++||+|.| +|++.++.++++.| +||+|+++|+++|+++.+++.+
T Consensus 5 ~y~~~~vG~~~~G~V~-v~~fG~FVel~~~~~~eGLvhis~el~~~~~~~~~~~~-~Gd~V~VkV~~vd~~~~kI~ls 80 (88)
T 1luz_A 5 CYSLPNAGDVIKGRVY-EKDYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKL-VGKTVKVKVIRVDYTKGYIDVN 80 (88)
T ss_dssp CSCCCCTTCEEEEEEE-EETTEEEEEETTCTTSEEEEGGGSSCCHHHHHHHHHHH-TTCEEEEEEEEEETTTTEEEEE
T ss_pred EecCCCCCCEEEEEEE-EEccEEEEEECCCCCeEEEEEeeHHhCcccccCHhHEe-CCCEEEEEEEEEECCCCEEEEE
Confidence 4566678999999999 999999999974 899999999 99999999999999 9999999999999876665543
No 45
>2eqs_A ATP-dependent RNA helicase DHX8; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=4.5e-13 Score=119.37 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=66.6
Q ss_pred ccccCCCCcEEEEEEEEEecceEEEEeCC---CceeeEecccc-CcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 943 SVKHTKPGRLVWGVLKEKMPGGVRVEFDG---DISGVFPTSAM-SQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 943 ~~~~~~~G~~v~G~V~~i~~~G~fV~~~~---~i~Gl~~~~~l-s~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+..+.++|+++.|+|++|++||+||++.+ +++||+|.++| ++.++.++.+.|++||.|+|+|+++|++++.||
T Consensus 6 ~~~~~~vG~i~~G~V~~v~~fG~FV~l~~~~~~~~Glvhisel~~~~~~~~~~~~~~~Gd~V~VkV~~vd~~~i~LS 82 (103)
T 2eqs_A 6 SGEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLS 82 (103)
T ss_dssp CCSSCCTTCEEEEEEEEECSSCEEEEECSSSSCCEEEECGGGTSSSSCCCCHHHHCCTTCEEEEEEEEEETTEEEEE
T ss_pred ccccCCCCCEEEEEEEEEeccEEEEEEcCCCCCeEEEEEHHHCCCCcccCCcccEeCCCCEEEEEEEEEECCeeEEE
Confidence 34566889999999999999999999986 99999999999 667788999999999999999999999887776
No 46
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=99.40 E-value=5.3e-13 Score=124.20 Aligned_cols=69 Identities=12% Similarity=0.179 Sum_probs=63.9
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeee
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
+.++|+++.|+|++|++||+||+++++++||||.++|++.++.++.+.|++||.|+|+|++||+++.++
T Consensus 4 ~~~vG~iv~G~V~~i~~~G~FV~l~~~~~Glihisel~~~~~~~~~~~~~vGd~V~vkV~~vd~~~~kI 72 (130)
T 2k4k_A 4 KFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKI 72 (130)
T ss_dssp CCCTTCEEEEEEEEEETTEEEEEEETTEEEEEEGGGTSSSCCSCGGGTCCTTCEEEEEEEEEETTTTEE
T ss_pred cCCCCCEEEEEEEEEeCCeEEEEECCCcEEEEEHHHCCcccccCccccCCCCCEEEEEEEEEeCCCCEE
Confidence 457799999999999999999999999999999999999999999999999999999999999854444
No 47
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=99.39 E-value=3.8e-13 Score=131.75 Aligned_cols=68 Identities=12% Similarity=0.119 Sum_probs=51.6
Q ss_pred CCCcEEEEEEEEEecceEEEEe--CCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEF--DGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~--~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
++|+++.|+|++|++||+||++ +++++||||.|+|++.++.+|++.|++||+|+|+|++||+++.+++
T Consensus 14 ~~G~iv~G~V~~I~~fGaFV~L~e~~g~eGLvhiSels~~~v~~~~~~~~vGd~V~VkVl~vD~~~~rI~ 83 (182)
T 1kl9_A 14 EVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYID 83 (182)
T ss_dssp CTTCEEEEEEEEECSSEEEEEETTTTTEEEEEEGGGC------------CTTCEEEEEEEEEETTTTEEE
T ss_pred CCCCEEEEEEEEEeccEEEEEEccCCCcEEEEEHHHCCCcccCCHHHhcCCCCEEEEEEEEEECCCCEEE
Confidence 5699999999999999999999 6899999999999999999999999999999999999998765554
No 48
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=99.38 E-value=6.6e-13 Score=112.50 Aligned_cols=66 Identities=14% Similarity=0.268 Sum_probs=59.2
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.++|+++.|+|+++++||+||+++++++||+|.+++++.++ +.|++||.|+|+|+++|+++.+++
T Consensus 2 ~~~~G~iv~G~V~~v~~~G~fV~l~~~~~Gllh~sel~~~~~----~~~~~Gd~V~v~V~~vd~~~~~i~ 67 (80)
T 2k52_A 2 DVEPGKFYKGVVTRIEKYGAFINLNEQVRGLLRPRDMISLRL----ENLNVGDEIIVQAIDVRPEKREID 67 (80)
T ss_dssp CCCTTCEEEEEEEEEETTEEEEEEETTEEEEECGGGCSSCCG----GGCCTTCEEEEEEEEEETTTTEEE
T ss_pred CCCCCCEEEEEEEEEeCCEEEEEECCCCEEEEEHHHCCcccc----eeeCCCCEEEEEEEEEECCCCEEE
Confidence 347799999999999999999999999999999999998765 679999999999999999655544
No 49
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Saccharomyces cerevisiae} PDB: 2a1a_A* 1q46_A
Probab=99.36 E-value=9.6e-13 Score=128.38 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=54.6
Q ss_pred CCcEEEEEEEEEecceEEEEe--CCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 949 PGRLVWGVLKEKMPGGVRVEF--DGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 949 ~G~~v~G~V~~i~~~G~fV~~--~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+|+++.|+|++|++||+||+| +++++||||.|+|++.++.+|++.|++||.|+|+|++||+++.+++
T Consensus 15 ~G~iv~G~V~~i~~fGaFV~L~e~~gveGLvhiSels~~~v~~~~~~~~vGd~V~vkVl~vd~~~~~I~ 83 (175)
T 2a19_A 15 IDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVAVVLRVDKEKGYID 83 (175)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTTTTCEEEEECC--------CCCCCCCTTSEEEEEEEEEETTTTEEE
T ss_pred CCCEEEEEEEEEecceEEEEEcCCCCcEEEEEHHHcCCcccCCHHHcCCCCCEEEEEEEEEECCCCeEE
Confidence 599999999999999999999 4899999999999999999999999999999999999998655543
No 50
>2cqo_A Nucleolar protein of 40 kDa; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=119.58 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=60.0
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG 1010 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~ 1010 (1026)
+.++|+++.|+|++|++||+||+|++ +++||||.++|++.++.++.+.|++||.|+|+|+++|+.
T Consensus 19 ~~~vG~iv~G~V~~I~~fGaFV~l~g~~~~Glvhisel~~~~~~~~~~~~~~Gd~V~VkV~~vd~~ 84 (119)
T 2cqo_A 19 LPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMK 84 (119)
T ss_dssp SCCTTCEEEEEEEEEETTEEEEECTTCSSCEEEEHHHHCSSCCSCHHHHCCTTCEEEEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEEeCceEEEEECCCcEEEEEEHHHCCcccccChhhcCCCCCEEEEEEEEEecc
Confidence 34569999999999999999999966 579999999999999999999999999999999999974
No 51
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=99.28 E-value=2.4e-15 Score=147.30 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=88.4
Q ss_pred EeeCceeeeeEeEEEEeeeEEEe--ccceeeeeccc-----ceeeCCccccccCcEEee--------cCeEEEehhhhhc
Q psy9769 872 VNLGDEVSCVVKGISVRGVIAQV--GYYKLKATCEN-----EYVEGNKADIKVGDEVQA--------KNSIEVAFKSLYR 936 (1026)
Q Consensus 872 ~~~G~~~~g~v~~i~~~g~~v~l--~~~~~~~~~~~-----~~~~~~~~~~kvG~~v~~--------~~~i~ls~K~l~~ 936 (1026)
...|+.+.|+|++|++||+||+| .+ |++|++|. .++.++.+.|++||+|+. +++|.||+|++..
T Consensus 13 p~~G~iv~G~V~~I~~fGaFV~L~e~~-g~eGLvhiSels~~~v~~~~~~~~vGd~V~VkVl~vD~~~~rI~LSlk~~~~ 91 (182)
T 1kl9_A 13 PEVEDVVMVNVRSIAEMGAYVSLLEYN-NIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSP 91 (182)
T ss_dssp CCTTCEEEEEEEEECSSEEEEEETTTT-TEEEEEEGGGC------------CTTCEEEEEEEEEETTTTEEEEESTTCCH
T ss_pred CCCCCEEEEEEEEEeccEEEEEEccCC-CcEEEEEHHHCCCcccCCHHHhcCCCCEEEEEEEEEECCCCEEEEEEeecCc
Confidence 46799999999999999999999 45 89999999 446788899999999883 7899999999754
Q ss_pred ccCCCCccccCCC-CcEEEEEEEEEec-ceEEEEeCCCceeeEeccccCc-ccccC
Q psy9769 937 IAQPLTSVKHTKP-GRLVWGVLKEKMP-GGVRVEFDGDISGVFPTSAMSQ-ATRTL 989 (1026)
Q Consensus 937 ~~~~~~~~~~~~~-G~~v~G~V~~i~~-~G~fV~~~~~i~Gl~~~~~ls~-~~~~~ 989 (1026)
+ ||..+.+.++ |+++.|+|+++++ || |++.+|++||+|.++++| +...+
T Consensus 92 ~--p~~~~~~~~~~g~~v~g~v~~i~~~~g--v~l~~giegl~h~s~~~~~~~~~~ 143 (182)
T 1kl9_A 92 E--EAIKCEDKFTKSKTVYSILRHVAEVLE--YTKDEQLESLFQRTAWVFDDKYKR 143 (182)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHHHHTT--CCSHHHHHHHHHHTHHHHHHHHTC
T ss_pred C--hHHHHHHhccCCCEEEEEEEEchhhcC--CcccCChhheEEeeecchhhhcCC
Confidence 4 4445555555 9999999999998 99 899999999999999987 44556
No 52
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.27 E-value=5.4e-12 Score=122.56 Aligned_cols=104 Identities=22% Similarity=0.309 Sum_probs=87.6
Q ss_pred EEEEE-CCEEEEEEhhhhhccChhhHhhhc--CCc-cCcccEEEecCCCHHHHHHHhhheecce----------------
Q psy9769 68 VKLIA-DGVEVAAHKMVLAACSPYFHAMFI--SFE-ESKQERIVLKGVDPNALKLLIDYVYSCE---------------- 127 (1026)
Q Consensus 68 v~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~--~~~-e~~~~~i~l~~~~~~~f~~~l~~~Ytg~---------------- 127 (1026)
|+|.. +|+.|.+||.+ |+.|+||++||. ++. |+....|.|++++..++..+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 79999999999 889999999998 455 6777889999999999999999999987
Q ss_pred ----------eeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHH
Q psy9769 128 ----------IYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRA 172 (1026)
Q Consensus 128 ----------~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~ 172 (1026)
+.++.+++.+|+.||++|++..|.++|+.++..++.-.++-++..
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~ 136 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 136 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 678899999999999999999999999999998876665554443
No 53
>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1
Probab=99.16 E-value=4e-11 Score=127.14 Aligned_cols=68 Identities=12% Similarity=0.132 Sum_probs=62.8
Q ss_pred CCCcEEEEEEEEEecceEEEEeC--CCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFD--GDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~--~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
++|+++.|+|++|++||+||++. ++++||||.|+|+|.++.++.+.|++||.|+|+|++||+++.+++
T Consensus 12 ~vG~iv~G~V~~I~~fGaFV~L~ey~gveGLvhiSels~~~i~~~~~~~kvGd~V~VkVl~vD~~~~rI~ 81 (308)
T 1q8k_A 12 EVEDVVMVNVRSIQEMGAYVSLLEYNNIEGMIHLSELSRRRIRSINKLIRIGRNECVKVIRVDKEKGYID 81 (308)
T ss_dssp SSCCEEEEEEEEEETTEEEEESCTTTSCCEEECGGGTSCSSCSCCTTTCSSSCEEEEEEEEEETTTTEEE
T ss_pred CCCCEEEEEEEEEeCcEEEEEECCCCCeEEEEEhHHcCcccccCHHHhcCCCCEEEEEEEEEeCCCCEEE
Confidence 46999999999999999999998 799999999999999999999999999999999999998654443
No 54
>1wi5_A RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=99.14 E-value=3.4e-11 Score=110.64 Aligned_cols=80 Identities=15% Similarity=0.219 Sum_probs=64.3
Q ss_pred CCccccCCCCcEEEEEEEEEecceEEEEeC-CCceeeEeccccC-cccccCcccccccCCEEEEEEEEEeCC--eeeech
Q psy9769 941 LTSVKHTKPGRLVWGVLKEKMPGGVRVEFD-GDISGVFPTSAMS-QATRTLVYTRFVIDTVIVCQILKYEDG--ELLLTE 1016 (1026)
Q Consensus 941 ~~~~~~~~~G~~v~G~V~~i~~~G~fV~~~-~~i~Gl~~~~~ls-~~~~~~~~~~~~~G~~V~~~Vl~vd~~--~~~~~~ 1016 (1026)
..++++.++|+++.|+|++|++||+||+|+ +++.||+|.+++. +....++.+.|++||.|+|+|++||++ ++.||.
T Consensus 13 ~~~~~~l~~G~i~~G~V~~v~~fG~fV~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd~~~~~i~Lsl 92 (119)
T 1wi5_A 13 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSV 92 (119)
T ss_dssp CCCTTTCCTTCEEEEEEEEECSSEEEEECCCSSCEEEEEHHHHHHHHHHHSSSCCCCTTCEEEEEEEECCTTSCEEEEEC
T ss_pred cccHhcCCCCCEEEEEEEEEeCceEEEEECCCCeEEEEEEecccccccccCccCEeCCCCEEEEEEEEEeCCCCEEEEEE
Confidence 345677799999999999999999999998 5788888877652 444567889999999999999999985 455554
Q ss_pred hhhh
Q psy9769 1017 ADEK 1020 (1026)
Q Consensus 1017 ~~~~ 1020 (1026)
.+..
T Consensus 93 k~~~ 96 (119)
T 1wi5_A 93 GHSE 96 (119)
T ss_dssp CCCC
T ss_pred chhh
Confidence 4333
No 55
>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A
Probab=99.13 E-value=8.4e-11 Score=123.18 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=61.8
Q ss_pred CCcEEEEEEEEEecceEEEEeC--CCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeee
Q psy9769 949 PGRLVWGVLKEKMPGGVRVEFD--GDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 949 ~G~~v~G~V~~i~~~G~fV~~~--~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
+|+++.|+|++|++||+||++. ++++||||.|+|++.++.++.+.|++||.|+|+|++||+++.++
T Consensus 11 ~Gdiv~G~V~~I~~fGaFV~L~e~~gieGlIhiSels~~~v~~~~~~~kvGd~V~vkVi~vD~~~~~I 78 (275)
T 3aev_A 11 EGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHI 78 (275)
T ss_dssp TTCEEEEEEEEEETTEEEEEETTSTTCEEEEEGGGSCSSCCSCGGGTCCTTCEEEEEEEEEETTTTEE
T ss_pred CCCEEEEEEEEEECcEEEEEECCCCCeEEEEEHHHcCcccccCHHhccCCCCEEEEEEEEEECCCCEE
Confidence 5999999999999999999998 69999999999999999999999999999999999999865444
No 56
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.00 E-value=5e-10 Score=98.57 Aligned_cols=79 Identities=30% Similarity=0.379 Sum_probs=65.3
Q ss_pred EEEEE-CCEEEEEEhhhhhccChhhHhhhc---CCccCcccEEEecCCCHHHHHHHhhhee-----c---ceee---ech
Q psy9769 68 VKLIA-DGVEVAAHKMVLAACSPYFHAMFI---SFEESKQERIVLKGVDPNALKLLIDYVY-----S---CEIY---VTE 132 (1026)
Q Consensus 68 v~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~---~~~e~~~~~i~l~~~~~~~f~~~l~~~Y-----t---g~~~---i~~ 132 (1026)
|+++. +|+.|.|||.+ |+.|+||++||. .+.|+....|.|+++++.+++.+++|+| + ++++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 55654 78999999999 999999999998 3667778899999999999999999999 4 6676 899
Q ss_pred hhHHHHHHHHHhcCc
Q psy9769 133 ENVQMLLPAANLLQL 147 (1026)
Q Consensus 133 ~~v~~ll~~A~~l~l 147 (1026)
+++.+|+.||++|++
T Consensus 83 ~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 83 EIALELLMAANFLDC 97 (97)
T ss_dssp GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhCC
Confidence 999999999999974
No 57
>1wi5_A RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=98.99 E-value=3.1e-10 Score=104.18 Aligned_cols=102 Identities=28% Similarity=0.474 Sum_probs=92.3
Q ss_pred EeeccccccccccccccccCcccccccccccccceeeeecccceeeeeecc-------------ccccCceEEEEEeeee
Q psy9769 546 ASLNPHHVNEMYINTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYD-------------SVILGQIVTCMISKIK 612 (1026)
Q Consensus 546 ls~~~~~~~~~~~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~-------------~~~~G~~v~~~v~~~~ 612 (1026)
+|++|..+|+.+....++.|+++.|+|.+++++|++|++|..+..||++.+ .+++||.|+|+|++++
T Consensus 3 ~sl~P~~vn~~~~~~~l~~G~i~~G~V~~v~~fG~fV~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd 82 (119)
T 1wi5_A 3 SGSSGKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVK 82 (119)
T ss_dssp CCCCCSCSSCCCCTTTCCTTCEEEEEEEEECSSEEEEECCCSSCEEEEEHHHHHHHHHHHSSSCCCCTTCEEEEEEEECC
T ss_pred cccCHHHhhccccHhcCCCCCEEEEEEEEEeCceEEEEECCCCeEEEEEEecccccccccCccCEeCCCCEEEEEEEEEe
Confidence 689999999999999999999999999999999999999866788888853 2889999999999999
Q ss_pred eccceeEEEEechHHHHhhhccCCCcccccccccCCc
Q psy9769 613 VAASMSILEVTLDEELIRSANRLSPSQVSLLNLVPGM 649 (1026)
Q Consensus 613 ~~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~~G~ 649 (1026)
.. ++.+.||+++..+.++...+...+++++|.||.
T Consensus 83 ~~--~~~i~Lslk~~~l~~~~~~~~~~~~~~~l~p~~ 117 (119)
T 1wi5_A 83 GN--GGVVSLSVGHSEVSTAIATEQQSWNLNNLSGPS 117 (119)
T ss_dssp TT--SCEEEEECCCCCSCCCCCCSSCCCCCCCCCCCC
T ss_pred CC--CCEEEEEEchhhcccceeeccCccChhhccCCC
Confidence 87 678999999999999888887888999999875
No 58
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4.7e-10 Score=139.22 Aligned_cols=73 Identities=10% Similarity=0.078 Sum_probs=67.1
Q ss_pred CccccCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCccc-ccCcccccccCCEEEEEEEEEeCCeeee
Q psy9769 942 TSVKHTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQAT-RTLVYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 942 ~~~~~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~-~~~~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
.+.+++++|+++.|+|++|++||+||+++.|++||||+|+|++.+ +.+|.+.|++||+|+|+|++||.++.++
T Consensus 895 et~~~l~~G~iv~G~V~~V~~fGaFV~L~~gveGLVHiSelsd~~~v~~p~~v~kvGd~V~vkVl~VD~~~~rI 968 (1219)
T 3psi_A 895 ESEKTFFKGSIIPVRVERFWHNDIICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITA 968 (1219)
T ss_dssp CCTTTSCTTCEEEEEEEEECSSCEEEECTTSCEEEECTTSSSSTTSCSCSTTTSCTTCEEEEEEEEEEGGGTEE
T ss_pred CcHhhCCCCCEEEEEEEEEecceEEEEeCCCceEEEEHHHcCCCcccCCHHHcCCCCCEEEEEEEEEECCCCEE
Confidence 355778999999999999999999999999999999999999988 8999999999999999999999765544
No 59
>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B*
Probab=98.98 E-value=2.1e-10 Score=120.00 Aligned_cols=70 Identities=13% Similarity=0.235 Sum_probs=63.7
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeC--CCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFD--GDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~--~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
..++|+++.|+|++|++||+||++. ++++||+|.|+|++.++.++.+.|++||.|+|+|+++|+++.+++
T Consensus 8 ~~~vG~iv~G~V~~I~~~GaFV~l~e~~~~~GlihiSels~~~v~~~~~~~~vGd~V~VkVi~vd~~~g~I~ 79 (266)
T 3cw2_C 8 LPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKVIVKVIRVDRRKGTVD 79 (266)
T ss_dssp SCCTTCEEEEEEEECCSSSBEEEETTTTSEECBBCGGGSSCSSCCCHHHHSCTTCEEEEEECCCCSSSCCCB
T ss_pred cCCCCCEEEEEEEEEeccEEEEEEcCCCCeEEEEEhHHcCcccccCHHHhCcCCCEEEEEEEEEeCCCCEEE
Confidence 3466999999999999999999997 899999999999999999999999999999999999998555543
No 60
>1go3_E DNA-directed RNA polymerase subunit E; transferase, transferase, transcription; 1.75A {Methanococcus jannaschii} SCOP: b.40.4.5 d.230.1.1
Probab=98.92 E-value=2.5e-09 Score=107.07 Aligned_cols=70 Identities=14% Similarity=0.117 Sum_probs=61.5
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCccccc-----------CcccccccCCEEEEEEEEEeCC------
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRT-----------LVYTRFVIDTVIVCQILKYEDG------ 1010 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~-----------~~~~~~~~G~~V~~~Vl~vd~~------ 1010 (1026)
.+|+++.|+|+++++||+||++.+ ++||+|.++++++++. ++.+.|++||.|+++|+++|..
T Consensus 80 ~~Gev~~G~V~~v~~~G~fV~l~~-~eglvhis~l~~~~~~~d~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd~~~~~p~~ 158 (187)
T 1go3_E 80 EMYELIEGEVVDVVEFGSFVRLGP-LDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYVRARIVAISLKAERKRG 158 (187)
T ss_dssp CTTCEEEEEEEEEETTEEEEECSS-SEEEEEGGGSCSSCEEECCC--CEEETTTCCEECTTCEEEEEEEEEECCC-----
T ss_pred CCCCEEEEEEEEEeCcEEEEEEcC-ccEEEEhHHhCCCcceECCccceEEecCCCeEEcCCCEEEEEEEEEEcccCCCCc
Confidence 569999999999999999999964 9999999999987765 7889999999999999999975
Q ss_pred -eeeechhh
Q psy9769 1011 -ELLLTEAD 1018 (1026)
Q Consensus 1011 -~~~~~~~~ 1018 (1026)
++.||-.+
T Consensus 159 ~~I~lS~k~ 167 (187)
T 1go3_E 159 SKIALTMRQ 167 (187)
T ss_dssp CEEEEECCS
T ss_pred cEEEEEEcC
Confidence 55666443
No 61
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.90 E-value=1.7e-09 Score=102.29 Aligned_cols=101 Identities=22% Similarity=0.287 Sum_probs=86.7
Q ss_pred EEEEE-CCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHHhhheecce-------------------
Q psy9769 68 VKLIA-DGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLLIDYVYSCE------------------- 127 (1026)
Q Consensus 68 v~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~------------------- 127 (1026)
|+|.. +|+.|.+|+.+ |..|.+|+.||.+.. ...|.|++++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i 79 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDI 79 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHHTTCC----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhh
Confidence 67776 78999999998 789999999998221 4579999999999999999999865
Q ss_pred -------eeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcchhhHHH
Q psy9769 128 -------IYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTNCLGIRA 172 (1026)
Q Consensus 128 -------~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n~~~~~~ 172 (1026)
+.++.+++.+|+.||++|++..|.+.|++++...+.-.+.-++..
T Consensus 80 ~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~ 131 (141)
T 1fs1_B 80 PVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 131 (141)
T ss_dssp -HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 567888999999999999999999999999998887666555443
No 62
>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=98.90 E-value=1.5e-10 Score=137.10 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=0.0
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.++|+++.|+|++|++||+||++.++++||||.|+|+++++.++++.|++||.|++||++||+ +.+++
T Consensus 624 ~~~vG~i~~G~V~~i~~fGaFVel~~g~eGLvHiSel~~~~v~~~~~~~~vGd~V~VkVi~vd~-~grI~ 692 (723)
T 3cdi_A 624 EIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDR-QGRIR 692 (723)
T ss_dssp ----------------------------------------------------------------------
T ss_pred hhhcCcEEEEEEEEEecceEEEEeCCCceEEEEHHHcCCccccCcccccCCCCEEEEEEEEECC-CCcEE
Confidence 4467999999999999999999999999999999999999999999999999999999999997 44444
No 63
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=98.89 E-value=4.8e-10 Score=133.61 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=68.3
Q ss_pred CCccccCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeee
Q psy9769 941 LTSVKHTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 941 ~~~~~~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
+.++++.++|+++.|+|++|++||+||+++.+++||||+|+|++.++.+|.+.|++||+|+|+|++||+++.++
T Consensus 646 ve~~~~l~vG~iv~G~V~~V~~fGaFV~l~~~~eGLVhiS~Lsd~~v~d~~~~~~vGd~V~VkVi~VD~~~~rI 719 (785)
T 3bzc_A 646 VESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRV 719 (785)
T ss_dssp CCSSTTCCTTCBCCCEEEEEETTEEEEECSSSSEEEEETTTSCSSCCSCHHHHCCTTCCCCCBEEEEETTTTEE
T ss_pred ccchhhcCCCCEEEEEEEEEecCCeEEEeCCCcEEEEEHHHcCccccCChhheeCCCCEEEEEEEEEECCCCEE
Confidence 45677789999999999999999999999989999999999999999999999999999999999999865544
No 64
>4aid_A Polyribonucleotide nucleotidyltransferase; transferase-peptide complex; 2.60A {Caulobacter vibrioides} PDB: 4aim_A 4am3_A
Probab=98.86 E-value=2.5e-10 Score=134.38 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=0.0
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.++|+++.|+|++|++||+||+|.++++||||+|+|+++++.++++.|++||+|+|||++||+ +.+++
T Consensus 634 ~~~vG~v~~G~V~~I~~fGaFVel~~g~eGLvHiSels~~rv~~~~d~~kvGD~V~VkVi~iD~-~grI~ 702 (726)
T 4aid_A 634 EAEVGKIYDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNERVAKPSDVLKEGQMVKVKLLGFDD-RGKTK 702 (726)
T ss_dssp ----------------------------------------------------------------------
T ss_pred hhcCCcEEEEEEEEEeccEEEEEECCCcEEEEEHHHcCcccccCccccCCCCCEEEEEEEEECC-CCcEE
Confidence 4467999999999999999999999999999999999999999999999999999999999997 34444
No 65
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=98.85 E-value=2.9e-10 Score=138.88 Aligned_cols=73 Identities=10% Similarity=0.078 Sum_probs=0.5
Q ss_pred ccccCCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCccc-ccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 943 SVKHTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQAT-RTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 943 ~~~~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~-~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.+++++|+++.|+|++|++||+||++++|++||||+|+|++.+ +.+|.+.|++||+|+|+|++||+++.+++
T Consensus 899 t~~~l~~G~iv~G~V~~V~~fGaFV~L~~gveGLVHiSelsd~~~v~~~~~v~kvGd~V~vkVl~VD~~~~rI~ 972 (1030)
T 3psf_A 899 SEKTFFKGSIIPVRVERFWHNDIICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAE 972 (1030)
T ss_dssp C-------------------------------------------------------------------------
T ss_pred cHHHhcCCCEEEEEEEEEccCeEEEEeCCCcEEEEEHHHcCCCcccCCHHHcCCCCCEEEEEEEEEECCCCEEE
Confidence 45677999999999999999999999999999999999999987 89999999999999999999998766654
No 66
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=98.84 E-value=4.1e-09 Score=106.05 Aligned_cols=75 Identities=16% Similarity=0.293 Sum_probs=66.1
Q ss_pred CCCCcEEEEEEEEEecceEEEEeC--------CCceeeEeccccCccccc--CcccccccCCEEEEEEEEEeCC--eeee
Q psy9769 947 TKPGRLVWGVLKEKMPGGVRVEFD--------GDISGVFPTSAMSQATRT--LVYTRFVIDTVIVCQILKYEDG--ELLL 1014 (1026)
Q Consensus 947 ~~~G~~v~G~V~~i~~~G~fV~~~--------~~i~Gl~~~~~ls~~~~~--~~~~~~~~G~~V~~~Vl~vd~~--~~~~ 1014 (1026)
.++|++|.|+|++|+++|+||++. .+++|+||++|+++.++. ++.+.|++||.|+|+|+++|+. ++.|
T Consensus 79 p~vGDvV~G~V~~v~~~~a~V~I~~v~~~~L~~~~~GlIhisei~~~~~~~~~~~~~l~~GD~V~akVisi~~~~~~i~L 158 (209)
T 2nn6_I 79 PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLL 158 (209)
T ss_dssp CCTTCEEEEEEEEECSSEEEEEEEESSSSCCCCSSCSCEEEEGGGTCSSCCCCGGGTCCSSSEEEEEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEEEEEECceEEEEECccccccccCCceeEEEHHHcccccccccchhhhcCCCCEEEEEEEEEeCCCCeEEE
Confidence 366999999999999999999974 578999999999998877 8999999999999999999985 5788
Q ss_pred chhhhhh
Q psy9769 1015 TEADEKL 1021 (1026)
Q Consensus 1015 ~~~~~~~ 1021 (1026)
|-.+.+|
T Consensus 159 S~k~~~l 165 (209)
T 2nn6_I 159 TTAENEL 165 (209)
T ss_dssp ECCSSSC
T ss_pred EEecCCC
Confidence 7665554
No 67
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=98.82 E-value=4.2e-09 Score=103.69 Aligned_cols=70 Identities=13% Similarity=0.187 Sum_probs=64.4
Q ss_pred CcEEEEEEEEEecceEEEEeCC----------CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeechhhh
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDG----------DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLTEADE 1019 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~----------~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~~~~~ 1019 (1026)
|++|.|+|++|.++|+||++.. +++|++|.+++++.++.++.+.|++||.|+|+|++ .++.||-.+.
T Consensus 58 GdiV~G~V~~V~~~ga~V~I~~v~~~~~~~~~~~~Gll~isei~~~~~~~~~~~~~~GD~V~akVi~---~~i~LS~k~~ 134 (179)
T 3m7n_A 58 GDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDILKARVIG---DNLRLSTKEE 134 (179)
T ss_dssp TCEEEEEEEEECSSEEEEEEEEETTCCSCCTTCEEEEEEGGGTTSSCCSSGGGTCCTTCEEEEEEEE---TTTEEECCST
T ss_pred CCEEEEEEEEEeCCcEEEEEccccCcccccccCeeEEEEHHHcCcchhhCHhhcCCCCCEEEEEEEC---CeEEEEEecC
Confidence 9999999999999999999987 89999999999999999999999999999999998 7788876665
Q ss_pred hhh
Q psy9769 1020 KLH 1022 (1026)
Q Consensus 1020 ~~~ 1022 (1026)
+|-
T Consensus 135 ~lG 137 (179)
T 3m7n_A 135 EMG 137 (179)
T ss_dssp TCE
T ss_pred CCC
Confidence 553
No 68
>1y14_B B16, RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.230.1.1 PDB: 1nt9_G 1wcm_G 1pqv_G 1y1v_G 1y1w_G 1y1y_G 1y77_G* 2b63_G* 2ja5_G* 2ja6_G* 2ja7_G* 2ja8_G* 2r7z_G 2r92_G 2r93_G 2vum_G* 3fki_G 3h3v_H 3hou_G* 3hov_G* ...
Probab=98.81 E-value=7.2e-09 Score=101.71 Aligned_cols=63 Identities=16% Similarity=0.066 Sum_probs=54.6
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCc----------ccccccCCEEEEEEEEEeCCe
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLV----------YTRFVIDTVIVCQILKYEDGE 1011 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~----------~~~~~~G~~V~~~Vl~vd~~~ 1011 (1026)
.+|++++|+|+++++||+||++++ ++||+|.|+|++...-++ ++.|++||.|++||+++|.++
T Consensus 82 ~~Gev~~G~V~~v~~fG~FV~l~~-~dglvhis~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd~~~ 154 (171)
T 1y14_B 82 FKGEVVDGTVVSCSQHGFEVQVGP-MKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQV 154 (171)
T ss_dssp CTTCEEEEEEEEEETTEEEEEETT-EEEEEEGGGSCTTCEECC-----CEECSSCEECTTCEEEEEEEEEEEET
T ss_pred CCCCEEEEEEEEEecCEEEEEecC-eEEEEEHHHCCCCceECcccCceEEeccceEECCCCEEEEEEEEEEcCC
Confidence 569999999999999999999988 999999999986533222 267999999999999999865
No 69
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.79 E-value=8.7e-10 Score=106.74 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=58.0
Q ss_pred EEEEE-CCEEEEEEhhhhhccChhhHhhhcCCccCcccEEEecCCCHHHHHHHhhheecce-------------------
Q psy9769 68 VKLIA-DGVEVAAHKMVLAACSPYFHAMFISFEESKQERIVLKGVDPNALKLLIDYVYSCE------------------- 127 (1026)
Q Consensus 68 v~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~------------------- 127 (1026)
|+|.. +|+.|.+|+.+ |..|++|+.||.+. .....|.|++++..++..+++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~--~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~ 82 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDD--CVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDD 82 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHcc--CCCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccch
Confidence 66664 79999999998 78999999999832 134579999999999999999999875
Q ss_pred --------eeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccC---CcchhhHHHhhh
Q psy9769 128 --------IYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLH---PTNCLGIRAFAD 175 (1026)
Q Consensus 128 --------~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~---~~n~~~~~~~a~ 175 (1026)
+.++.+++.+|+.||++|++..|.+.|+.++...+. ++.+..++.+..
T Consensus 83 i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~n 141 (160)
T 2p1m_A 83 LKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKN 141 (160)
T ss_dssp ------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCC
T ss_pred hhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCC
Confidence 357788999999999999999999999999999884 444444444433
No 70
>2b8k_G B16, DNA-directed RNA polymerase II 19 kDa polypeptide; DNA-dependent RNA polymerase, cellular RNA polymerase; 4.15A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.230.1.1
Probab=98.78 E-value=9.4e-09 Score=103.52 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=55.3
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcc----------cccccCCEEEEEEEEEeCCe
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVY----------TRFVIDTVIVCQILKYEDGE 1011 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~----------~~~~~G~~V~~~Vl~vd~~~ 1011 (1026)
++|++++|+|+++++||+||++++ ++||||.++|++...-++. +.|++||.|++||+++|.++
T Consensus 82 ~vGev~~G~V~~vt~fG~FVelg~-~dGlVhiS~l~d~~~~d~~~~~w~~~~~~~~~~~Gd~VrVkV~~vd~~~ 154 (215)
T 2b8k_G 82 FKGEVVDGTVVSCSQHGFEVQVGP-MKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQV 154 (215)
T ss_dssp CTTEEEEEEEEEEETTEEEEECTT-SEEEEEGGGSCSSCCCBSSCSSCEEECSSCEEETTCEEEEEEEEEEEET
T ss_pred CCCCEEEEEEEEEecceEEEEecC-cEEEEEHHHCCccceeccccccceeeccccEECCCCEEEEEEEEEEcCC
Confidence 669999999999999999999987 9999999999875443332 67999999999999999865
No 71
>4ayb_E DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2y0s_E 4b1o_E 4b1p_T 2waq_E 2wb1_E 2pmz_E 3hkz_E
Probab=98.73 E-value=2.5e-08 Score=99.01 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=56.0
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc-----------cCcccccccCCEEEEEEEEEeCC
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR-----------TLVYTRFVIDTVIVCQILKYEDG 1010 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~-----------~~~~~~~~~G~~V~~~Vl~vd~~ 1010 (1026)
.+|+++.|+|+++++||+||++. .++||+|.++|++++. +++.+.|++||.|++||++||++
T Consensus 80 ~~Gev~~G~V~~v~~~G~fv~l~-~~~glvh~s~l~~d~~~~d~~~~~~~g~~~~~~~~~Gd~VrvkV~~v~~~ 152 (180)
T 4ayb_E 80 VVQEVVEGEVLQVDNYGVFVNLG-PMDGLVHISQITDDTLKYDNVRGIIFGEKSKKVIQKGDKVRARVISVAST 152 (180)
T ss_dssp CTTCEEEEEEEEEETTEEEEECS-SSEEEEEGGGSCSSCEEECSSSCCEEETTTCCCCCTTCEEEEEEEEECC-
T ss_pred cCCCEEEEEEeeeccceEEEEEC-CccceEEeeecCCCccccchhcceEEEeccCeEECCCCEEEEEEEEEeCC
Confidence 45999999999999999999985 6999999999998776 57888999999999999999964
No 72
>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=98.70 E-value=6.9e-10 Score=131.99 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=37.2
Q ss_pred cCCCCcEEEEEEEEEecceEEEEeCCCceeeEecccc----CcccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 946 HTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAM----SQATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 946 ~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~l----s~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.++|+++.|+|++|++||+||+|.+|++||+|.|+| ++++++++++.|++||+|+++|++||+ +.+++
T Consensus 664 ~~~vG~i~~G~V~~i~~fGaFV~l~~g~eGLvHiSel~~~~s~~rv~~~~~~~~vGd~V~VkVi~vd~-~grI~ 736 (757)
T 1e3p_A 664 SPEVGERILGSVVKTTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDS-RGKLS 736 (757)
T ss_dssp ---------CBEEECC-CSCEECCC---CCCCC-------------------CCSSCBCCCCCCCCCS-SCC--
T ss_pred hcccccEEEEEEEEccccEEEEEEcCCcEEEEEhHHhccccCCCcccCcccccCCCCEEEEEEEEECC-CCCEE
Confidence 4577999999999999999999999999999999999 999999999999999999999999998 44544
No 73
>2c35_B Human RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: b.40.4.5 d.230.1.1
Probab=98.67 E-value=3.6e-08 Score=97.00 Aligned_cols=63 Identities=16% Similarity=0.092 Sum_probs=53.9
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCc------------ccccccCCEEEEEEEEEeCCe
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLV------------YTRFVIDTVIVCQILKYEDGE 1011 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~------------~~~~~~G~~V~~~Vl~vd~~~ 1011 (1026)
.+|++++|+|+++++||+||++ +.++||||.++|++...-++ .+.|++||.|++||+++|.++
T Consensus 80 ~~Gev~~G~V~~v~~fG~fV~l-~~~~glvhis~l~~~~~~d~~~~~~~~~~~~~~~~~~~Gd~V~vkV~~vd~~~ 154 (172)
T 2c35_B 80 FKGEVVDAVVTQVNKVGLFTEI-GPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDK 154 (172)
T ss_dssp CTTCEEEEEEEEEETTEEEEEE-TTEEEEEEGGGSCTTEEEESSSSSCEEEETTSCSEEETTCEEEEEEEEEEEET
T ss_pred CCCCEEEEEEEEEeCCEEEEEE-CCEEEEEEHHHCCCCcEECCCCCccEEEeCCCCEEECCCCEEEEEEEEEEcCC
Confidence 4699999999999999999999 57889999999986433222 557999999999999999863
No 74
>2je6_I RRP4, exosome complex RNA-binding protein 1; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: b.40.4.5 b.84.4.2 d.51.1.1 PDB: 2jea_I* 2jeb_I* 3l7z_C
Probab=98.61 E-value=5e-08 Score=101.02 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=65.7
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc---cCcccccccCCEEEEEEEEEeC-Ceeeechhhhhhh
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR---TLVYTRFVIDTVIVCQILKYED-GELLLTEADEKLH 1022 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~---~~~~~~~~~G~~V~~~Vl~vd~-~~~~~~~~~~~~~ 1022 (1026)
++|++|.|+|+++.++|+||.+.+..+|++|.+++++.++ .++.+.|++||.|+|+|+++++ .++.||-.+..|-
T Consensus 73 ~~GDiV~G~V~~v~~~ga~VdI~~~~~GlL~isei~~~~~~~~~~~~~~l~vGD~V~arVi~v~~~~~i~LS~r~~~lG 151 (251)
T 2je6_I 73 KINDIVIGLVEDVEIYGWVVDIKAPYKAYLPASNLLGRSINVGEDLRRYLDVGDYVIARIENFDRSIDPVLSVKGKDLG 151 (251)
T ss_dssp CTTCEEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTCCCSSSCCTTCEEEEEEEEEETTEEEEEECCSTTCE
T ss_pred CCCCEEEEEEEEEeCceEEEEcCCCeEEEEEHHHhcCCccccccchhhcCCCCCEEEEEEEEECCCCcEEEEEccccCC
Confidence 5599999999999999999999989999999999998666 7888999999999999999997 4677775554443
No 75
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=98.60 E-value=3.7e-08 Score=88.67 Aligned_cols=83 Identities=11% Similarity=0.027 Sum_probs=71.2
Q ss_pred ccCCCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeecccc
Q psy9769 633 NRLSPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRH 708 (1026)
Q Consensus 633 ~~~~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~ 708 (1026)
...+++......+.+|++++|+|.++.++|++|.+ ..++.||++.+++++.+ .+.|++|+++ +|+|+.+|+.+
T Consensus 17 ~~~~p~~~~~~~~~~G~iv~G~V~~v~~~G~fV~l-~~~~~Gll~~sel~~~~~~~~~~~~~vGd~V--~v~V~~vd~~~ 93 (109)
T 2khj_A 17 RGSHMFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLRASEASRDRVEDATLVLSVGDEV--EAKFTGVDRKN 93 (109)
T ss_dssp ----CHHHHTTTCCSSSEEEEEEEEECSSCEEEEC-STTCBCCBCTTCCCSSSSSSGGGSCCTTCEE--EEEEEEEETTT
T ss_pred cccCHHHHHhhcCCCCCEEEEEEEEEECCeEEEEE-CCCCEEEEEHHHcCcccccChhhccCCCCEE--EEEEEEEECCC
Confidence 34455666777889999999999999999999999 36899999999998754 5579999999 99999999999
Q ss_pred ceEEeechhh
Q psy9769 709 FHVYLSCNEA 718 (1026)
Q Consensus 709 ~~v~lS~k~~ 718 (1026)
+++.||+++.
T Consensus 94 ~ki~LS~k~~ 103 (109)
T 2khj_A 94 RAISLSVRAK 103 (109)
T ss_dssp TEEEEETTSS
T ss_pred CEEEEEEeec
Confidence 9999999984
No 76
>3h0g_G DNA-directed RNA polymerase II subunit RPB7; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=98.58 E-value=2.9e-08 Score=97.18 Aligned_cols=64 Identities=6% Similarity=-0.016 Sum_probs=55.6
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccC----------cccccccCCEEEEEEEEEeCCee
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTL----------VYTRFVIDTVIVCQILKYEDGEL 1012 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~----------~~~~~~~G~~V~~~Vl~vd~~~~ 1012 (1026)
.+|++++|+|+++++||+||++. .++||||.++|++...-+ ..+.|++||+|++||+++|.++.
T Consensus 83 ~~Gev~~G~V~~v~~fG~FV~l~-~~~glVh~s~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~VrvkV~~vd~~~~ 156 (172)
T 3h0g_G 83 FRGEVVDAIVTTVNKMGFFANIG-PLNVFVSSHLVPPDMKFDPTANPPNYSGEDQVIEKGSNVRLKIVGTRTDAT 156 (172)
T ss_dssp CTTCEEECCCCEEETTEEECCBT-TBCCEEEGGGSCTTCCCBSSSSSCBEESSSCEECSSCCEEEEEEEEEESSS
T ss_pred CCCCEEEEEEEEEEcceEEEEeC-CeEEEEEHHHCCCccccCcccccceEecCCcEECCCCEEEEEEEEEECCCC
Confidence 45999999999999999999995 689999999998654433 35789999999999999998763
No 77
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=98.57 E-value=5.6e-08 Score=82.00 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=65.3
Q ss_pred ccCCceEEeeeecccCCcceeeccccceeeccCcccccchhhhhhcccccccccceeeeeccccceEEeechhh
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAYNAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEA 718 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~ 718 (1026)
+++|+.+.|+|.++.++|++|++. .++.|+++.+++++.+.+.|++|+++ +|+|+.+|+.++++.||+++.
T Consensus 3 ~~~G~iv~G~V~~v~~~G~fV~l~-~~~~Gllh~sel~~~~~~~~~~Gd~V--~v~V~~vd~~~~~i~lsl~~~ 73 (80)
T 2k52_A 3 VEPGKFYKGVVTRIEKYGAFINLN-EQVRGLLRPRDMISLRLENLNVGDEI--IVQAIDVRPEKREIDFKYIPL 73 (80)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEEE-TTEEEEECGGGCSSCCGGGCCTTCEE--EEEEEEEETTTTEEEEEECSC
T ss_pred CCCCCEEEEEEEEEeCCEEEEEEC-CCCEEEEEHHHCCcccceeeCCCCEE--EEEEEEEECCCCEEEEEEeec
Confidence 578999999999999999999994 68999999999987655689999999 999999999999999999985
No 78
>1hh2_P NUSA, N utilization substance protein A; transcription regulation, termination; 2.1A {Thermotoga maritima} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1 PDB: 1l2f_A
Probab=98.56 E-value=1.3e-07 Score=101.40 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=74.5
Q ss_pred cccccCcEEee-------cCeEEEehhh-hhc---ccCC---CCccccCCCCcEEEEEEEEEecceEEEEeCCCceeeEe
Q psy9769 913 ADIKVGDEVQA-------KNSIEVAFKS-LYR---IAQP---LTSVKHTKPGRLVWGVLKEKMPGGVRVEFDGDISGVFP 978 (1026)
Q Consensus 913 ~~~kvG~~v~~-------~~~i~ls~K~-l~~---~~~~---~~~~~~~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~ 978 (1026)
..+++||.++. .|+...+.|+ ++. .... +.+| ..++|++|+|+|++++++|+||.++ +++|++|
T Consensus 85 ~~~~vGd~ie~~I~~~dfgR~aa~~aKqvi~qkireaere~i~~e~-~~~~GeIV~G~V~ri~~~~v~VDlG-k~EgiLp 162 (344)
T 1hh2_P 85 PLAEVGSIVKKELNVKNFGRIAAQTAKQVLIQRIRELEKEKQFEKY-SELKGTVTTAEVIRVMGEWADIRIG-KLETRLP 162 (344)
T ss_dssp TTCCTTCEEEEECCCCCSSSCSGGGHHHHHHHHHHHHTTCCSSCCT-TCCTTCEEEEEEEEECSSEEEEEET-TEEEEEE
T ss_pred ccccCCCEEEEEEccccCccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCCEEEEEEEEEecCcEEEEeC-CeEEEEe
Confidence 45788988873 5666777788 432 2211 4444 2336999999999999999999995 9999999
Q ss_pred ccccCcccccCcccccccCCEEEEEEEEEeCC----eeeech
Q psy9769 979 TSAMSQATRTLVYTRFVIDTVIVCQILKYEDG----ELLLTE 1016 (1026)
Q Consensus 979 ~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~----~~~~~~ 1016 (1026)
++|++ |.+.|++||+|+|.|++||++ .+.||.
T Consensus 163 ~sE~i------p~E~~~vGD~Vkv~V~~V~~~~kg~~I~LSR 198 (344)
T 1hh2_P 163 KKEWI------PGEEIKAGDLVKVYIIDVVKTTKGPKILVSR 198 (344)
T ss_dssp GGGSC------TTCCCCTTCEEEEEEEEEEEETTEEEEEEES
T ss_pred HHHcC------CCcCCCCCCEEEEEEEEEEcCCCCcEEEEEe
Confidence 99995 778999999999999999964 456663
No 79
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=98.55 E-value=6.6e-08 Score=87.84 Aligned_cols=88 Identities=11% Similarity=0.074 Sum_probs=73.2
Q ss_pred CCcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccch-h----hhhhcccccccccceeeeeccccce
Q psy9769 636 SPSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTA-Y----NAKYLTNKRVDLDCSVLYVCPRHFH 710 (1026)
Q Consensus 636 ~~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~-~----~~~~~~G~~~~~~~~Il~vd~~~~~ 710 (1026)
+++......+..|+.+.|+|.++.++|++|.+ .+++.||++.+++++. + .+.|++|+++ +++|+.+|+++++
T Consensus 19 ~p~~~~~~~~~~G~~~~G~V~~v~~~G~FV~l-~~~~~Glvhisel~~~~~~~~~~~~~~vGd~V--~vkV~~vd~~~~r 95 (115)
T 2khi_A 19 SHWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV--EVMVLDIDEERRR 95 (115)
T ss_dssp --CCCSSCSSCSSCEEEEEEEEEETTEEEEEC-STTCEEEEETTSSSCSSTTCSSTTTCCTTCEE--EEEEEEEETTTTE
T ss_pred CCHHHHhhcCCCCCEEEEEEEEEECCEEEEEE-CCCCEEEEEHHHCCccccccCcccEECCCCEE--EEEEEEEECCCCE
Confidence 34445556789999999999999999999999 4689999999999863 2 5679999999 9999999999999
Q ss_pred EEeechhhhhhcccCCCCcce
Q psy9769 711 VYLSCNEALLERQTGRPEFSV 731 (1026)
Q Consensus 711 v~lS~k~~l~~~~~~~~~~~~ 731 (1026)
+.||+++. .++||..+
T Consensus 96 I~lslk~~-----~~~p~~~~ 111 (115)
T 2khi_A 96 ISLGLKQC-----KANPWQQF 111 (115)
T ss_dssp EEECCCCC-----CSSCCCCC
T ss_pred EEEEEEec-----CcCHHHHH
Confidence 99999985 44666544
No 80
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Saccharomyces cerevisiae} PDB: 2a1a_A* 1q46_A
Probab=98.54 E-value=4.6e-09 Score=102.37 Aligned_cols=101 Identities=15% Similarity=-0.008 Sum_probs=83.0
Q ss_pred cCCceEEeeeecccCCcceeecc-ccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechhhhh
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLK-NTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEALL 720 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~-~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~l~ 720 (1026)
++|+.+.|+|+++.++|++|++. ++++.|++|.+++++.+ .+.+++||++ +|+|+.+|+.++++.||+++.
T Consensus 14 ~~G~iv~G~V~~i~~fGaFV~L~e~~gveGLvhiSels~~~v~~~~~~~~vGd~V--~vkVl~vd~~~~~I~LSlk~~-- 89 (175)
T 2a19_A 14 EIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKND--VAVVLRVDKEKGYIDLSKRRV-- 89 (175)
T ss_dssp CTTCEEEEEEEEEETTEEEEEETTTTTCEEEEECC--------CCCCCCCTTSEE--EEEEEEEETTTTEEEEESTTC--
T ss_pred CCCCEEEEEEEEEecceEEEEEcCCCCcEEEEEHHHcCCcccCCHHHcCCCCCEE--EEEEEEEECCCCeEEEEEEec--
Confidence 37999999999999999999994 36899999999999876 5679999999 999999999999999999985
Q ss_pred hcccCCCCcceeeeeceeeeeeeccccccc-cccC
Q psy9769 721 ERQTGRPEFSVCISIVKKTIFEDSSVSGTE-AVNQ 754 (1026)
Q Consensus 721 ~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~-~~g~ 754 (1026)
.+++|....+.+..|+++.+. |..+. .+|.
T Consensus 90 ---~~~~~~~~~~~~~~g~~v~g~-V~~i~~~~G~ 120 (175)
T 2a19_A 90 ---SSEDIIKCEEKYQKSKTVHSI-LRYCAEKFQI 120 (175)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTC
T ss_pred ---CcChHHHHHHhccCCCcceEE-EEEchhhcCC
Confidence 346777888888999888776 77777 6674
No 81
>2bh8_A 1B11; transcription, molecular evolution, unique architecture, transcription regulation, phosphorylation; 1.9A {Escherichia coli}
Probab=98.51 E-value=1.3e-07 Score=83.28 Aligned_cols=84 Identities=18% Similarity=0.135 Sum_probs=61.8
Q ss_pred eCceeeeeEeEE---EEeeeEEEeccceeeeecccceeeCCccccccCcEEeecCeEEEehhhhhcccCCCCccccCCCC
Q psy9769 874 LGDEVSCVVKGI---SVRGVIAQVGYYKLKATCENEYVEGNKADIKVGDEVQAKNSIEVAFKSLYRIAQPLTSVKHTKPG 950 (1026)
Q Consensus 874 ~G~~~~g~v~~i---~~~g~~v~l~~~~~~~~~~~~~~~~~~~~~kvG~~v~~~~~i~ls~K~l~~~~~~~~~~~~~~~G 950 (1026)
.+...+|+|+.. ..|| |+.-.+.+.+.|+|.+-+.... + . ....++|
T Consensus 13 ~~~~~~G~Vk~fn~~kGfG-FI~~~~gg~dvfvH~s~l~~~~--~------------------~---------~~~l~~G 62 (101)
T 2bh8_A 13 QSGKMTGIVKWFNADKGFG-FITPDDGSKDVFVHFSAGSSGA--A------------------V---------RGNPQQG 62 (101)
T ss_dssp ---CEEEEEEEEEGGGTEE-EEEESSSSCEEEEECCCSCSSS--C------------------C---------CCCCCTT
T ss_pred ccccceeEEEEEECCCCCE-EEEeCCCCcEEEEEEEEEecCC--c------------------c---------ccCCCCC
Confidence 456778999977 5689 6665553588888885432111 0 0 0233679
Q ss_pred cEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc
Q psy9769 951 RLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR 987 (1026)
Q Consensus 951 ~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~ 987 (1026)
++|+|.|+++++||+||++.++++||||.|+|+|.++
T Consensus 63 e~V~g~V~~i~~fG~fv~l~~~~eGlvhis~i~~~~~ 99 (101)
T 2bh8_A 63 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWAQA 99 (101)
T ss_dssp CEEEEEEEECCSEEEEECTTSCEEEEEEEEEEEECCC
T ss_pred CEEEEEEEEeCCcEEEEEcCCCceEEEEHHHCccCcC
Confidence 9999999999999999999999999999999998764
No 82
>2z0s_A Probable exosome complex RNA-binding protein 1; alpha/beta protein, cytoplasm, structural genomics, NPPSFA; 3.20A {Aeropyrum pernix} SCOP: b.40.4.5 d.51.1.1
Probab=98.50 E-value=1.1e-07 Score=97.93 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=64.2
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcc----cccCcccccccCCEEEEEEEEEeCC-eeeechhhhhh
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQA----TRTLVYTRFVIDTVIVCQILKYEDG-ELLLTEADEKL 1021 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~----~~~~~~~~~~~G~~V~~~Vl~vd~~-~~~~~~~~~~~ 1021 (1026)
++|++|.|+|+++.++|+||.+....+|++|.+++++. ...++.+.|++||.|+|+|++++++ +..||-....|
T Consensus 65 ~~GDiV~G~V~~v~~~~~~V~I~~~~~g~l~isei~~~~~~~~~~~~~~~l~~GD~V~a~Vi~v~~~~~i~LS~k~~~l 143 (235)
T 2z0s_A 65 QAGDVVIGLIQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKTRSPLLTVQGEGL 143 (235)
T ss_dssp CTTCCEEEEEEEECSSEEEEECSSSSCEEEEHHHHHTSCCCTTTTCCTTSSCTTCEEEEEEEEECTTSCEEEECCSSSC
T ss_pred CCCCEEEEEEEEEeCCeEEEEeCCCeEEEEEHHHhCCCccccchhhHhhcCCCCCEEEEEEEEECCCCcEEEEEecccC
Confidence 56999999999999999999999899999999999862 4567888999999999999999975 67777554444
No 83
>1luz_A Protein K3, protein K2; stranded anti-parallel beta barrel, viral protein; 1.80A {Vaccinia virus} SCOP: b.40.4.5
Probab=98.49 E-value=1.1e-07 Score=81.29 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=65.3
Q ss_pred ccccccCCceEEeeeecccCCcceeeccc-cceeeccCcc-cccchh----hhhhcccccccccceeeeeccccceEEee
Q psy9769 641 SLLNLVPGMKVIANICQQLPHGWKAKLKN-TQFKAFISPE-AMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLS 714 (1026)
Q Consensus 641 ~~~~l~~G~~v~~~V~~v~~~G~~v~~~~-~~~~gfi~~~-~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS 714 (1026)
.+...+.|+.++|+|+ +.++|++|++.. +++.|++|.+ ++++.+ ++.+ +|+++ +++|+.+|++++++.||
T Consensus 5 ~y~~~~vG~~~~G~V~-v~~fG~FVel~~~~~~eGLvhis~el~~~~~~~~~~~~-~Gd~V--~VkV~~vd~~~~kI~ls 80 (88)
T 1luz_A 5 CYSLPNAGDVIKGRVY-EKDYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKL-VGKTV--KVKVIRVDYTKGYIDVN 80 (88)
T ss_dssp CSCCCCTTCEEEEEEE-EETTEEEEEETTCTTSEEEEGGGSSCCHHHHHHHHHHH-TTCEE--EEEEEEEETTTTEEEEE
T ss_pred EecCCCCCCEEEEEEE-EEccEEEEEECCCCCeEEEEEeeHHhCcccccCHhHEe-CCCEE--EEEEEEEECCCCEEEEE
Confidence 4556688999999999 999999999953 4799999999 998766 4556 99999 99999999999999999
Q ss_pred chhh
Q psy9769 715 CNEA 718 (1026)
Q Consensus 715 ~k~~ 718 (1026)
+|+.
T Consensus 81 lk~~ 84 (88)
T 1luz_A 81 YKRM 84 (88)
T ss_dssp EEEE
T ss_pred Eeec
Confidence 9974
No 84
>2ba0_A Archeal exosome RNA binding protein RRP4; RNAse PH, RNA degradation, exoribonuclease, S1domain, KH domain, archaeal; 2.70A {Archaeoglobus fulgidus} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=98.49 E-value=2.3e-07 Score=94.87 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=64.7
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcc-cccCcccccccCCEEEEEEEEEeC-Ceeeechhhhhh
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQA-TRTLVYTRFVIDTVIVCQILKYED-GELLLTEADEKL 1021 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~-~~~~~~~~~~~G~~V~~~Vl~vd~-~~~~~~~~~~~~ 1021 (1026)
++|++|.|+|+.+.++|+||.+.+..+|++|.++++.. ...+..+.|++||.|+|+|+++++ .+..||-.+..|
T Consensus 56 ~~GDiV~G~V~~v~~~~a~V~I~~~~~g~l~isev~~~~~~~~~~~~l~~GD~V~arVi~v~~~~~i~LS~r~~~l 131 (229)
T 2ba0_A 56 SVGDVVIGIIREVAANGWAVDIYSPYQAFLPVSENPEMKPNKKPNEVLDIGDAIIAKVLNIDPKMKVTLTMKDRIC 131 (229)
T ss_dssp CTTCEEEEEEEEECSSEEEEECSSSSCEEEEGGGCTTCCTTSCGGGTCCTTCEEEEEEEEECTTCCEEEECCSSSC
T ss_pred CCCCEEEEEEEEEeCCeEEEEeCCCeEEEEEHHHccccccccchhcccCCCCEEEEEEEEECCCCcEEEEEccccC
Confidence 55999999999999999999999889999999999963 667888999999999999999987 467777555444
No 85
>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1
Probab=98.40 E-value=2.7e-08 Score=105.54 Aligned_cols=104 Identities=12% Similarity=-0.020 Sum_probs=90.6
Q ss_pred ccCCceEEeeeecccCCcceeecc-ccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechhhh
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLK-NTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEAL 719 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~-~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~l 719 (1026)
+++|+++.|+|.++.++|++|++. ++++.||++.+++++.+ .+.|++||++ +|+|+.+|+.++++.||+++..
T Consensus 11 ~~vG~iv~G~V~~I~~fGaFV~L~ey~gveGLvhiSels~~~i~~~~~~~kvGd~V--~VkVl~vD~~~~rI~LSlK~~~ 88 (308)
T 1q8k_A 11 PEVEDVVMVNVRSIQEMGAYVSLLEYNNIEGMIHLSELSRRRIRSINKLIRIGRNE--CVKVIRVDKEKGYIDLSKRRVS 88 (308)
T ss_dssp CSSCCEEEEEEEEEETTEEEEESCTTTSCCEEECGGGTSCSSCSCCTTTCSSSCEE--EEEEEEEETTTTEEEEECSSCC
T ss_pred CCCCCEEEEEEEEEeCcEEEEEECCCCCeEEEEEhHHcCcccccCHHHhcCCCCEE--EEEEEEEeCCCCEEEEEEEecc
Confidence 468999999999999999999994 25899999999999865 5779999999 9999999999999999999853
Q ss_pred hhcccCCCCcceeeeeceeeeeeecccccccc-ccCcc
Q psy9769 720 LERQTGRPEFSVCISIVKKTIFEDSSVSGTEA-VNQNC 756 (1026)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~~-~g~~~ 756 (1026)
+++|....+.+..|+++.+. |..+.. +|+++
T Consensus 89 -----~~p~~~~~~~~~~G~~v~G~-V~~v~~~~G~fi 120 (308)
T 1q8k_A 89 -----PEEAIKCEDKFTKSKTVYSI-LRHVAEVLEYTK 120 (308)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCCS
T ss_pred -----cChHHHHHHHccCCCeeEEE-EEEcccccCCcc
Confidence 46777888888999998887 888887 68754
No 86
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=98.36 E-value=3.3e-07 Score=85.02 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=67.9
Q ss_pred ccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechhh
Q psy9769 643 LNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEA 718 (1026)
Q Consensus 643 ~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~ 718 (1026)
..+..|+++.|+|.++.++|++|.+ .+++.||++.+++++.+ .+.|++|++| +|+|+.+|+.++++.||+++.
T Consensus 3 ~~~~vG~iv~G~V~~i~~~G~FV~l-~~~~~Glihisel~~~~~~~~~~~~~vGd~V--~vkV~~vd~~~~kI~LSlk~~ 79 (130)
T 2k4k_A 3 AKFEVGSVYTGKVTGLQAYGAFVAL-DEETQGLVHISEVTHGFVKDINEHLSVGDEV--QVKVLAVDEEKGKISLSIRAT 79 (130)
T ss_dssp CCCCTTCEEEEEEEEEETTEEEEEE-ETTEEEEEEGGGTSSSCCSCGGGTCCTTCEE--EEEEEEEETTTTEEEEESHHH
T ss_pred CcCCCCCEEEEEEEEEeCCeEEEEE-CCCcEEEEEHHHCCcccccCccccCCCCCEE--EEEEEEEeCCCCEEEEEEeec
Confidence 3578999999999999999999999 47899999999998765 5779999999 999999999999999999996
Q ss_pred hh
Q psy9769 719 LL 720 (1026)
Q Consensus 719 l~ 720 (1026)
..
T Consensus 80 ~~ 81 (130)
T 2k4k_A 80 QA 81 (130)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 87
>2cqo_A Nucleolar protein of 40 kDa; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=7.8e-07 Score=80.94 Aligned_cols=80 Identities=10% Similarity=-0.037 Sum_probs=67.5
Q ss_pred CcccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeecccc--ce
Q psy9769 637 PSQVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRH--FH 710 (1026)
Q Consensus 637 ~~~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~--~~ 710 (1026)
++......++.|+++.|+|.++.++|++|++...+..||+|.+++++.+ .+.|++|+++ +|+|+.+|+.+ ++
T Consensus 12 ~~~~~~~~~~vG~iv~G~V~~I~~fGaFV~l~g~~~~Glvhisel~~~~~~~~~~~~~~Gd~V--~VkV~~vd~~~~~~~ 89 (119)
T 2cqo_A 12 RPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKV--WVKLIGREMKNDRIK 89 (119)
T ss_dssp CCCCSCCSCCTTCEEEEEEEEEETTEEEEECTTCSSCEEEEHHHHCSSCCSCHHHHCCTTCEE--EEEEEEEEECSSCEE
T ss_pred chhhhhcccCCCCEEEEEEEEEeCceEEEEECCCcEEEEEEHHHCCcccccChhhcCCCCCEE--EEEEEEEeccccCce
Confidence 3444556678999999999999999999999311369999999998765 5679999999 99999999875 79
Q ss_pred EEeechhh
Q psy9769 711 VYLSCNEA 718 (1026)
Q Consensus 711 v~lS~k~~ 718 (1026)
+.||+++.
T Consensus 90 i~LSlk~~ 97 (119)
T 2cqo_A 90 VSLSMKVV 97 (119)
T ss_dssp EEEESTTB
T ss_pred EEEEEeec
Confidence 99999985
No 88
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.24 E-value=2.1e-06 Score=75.20 Aligned_cols=79 Identities=29% Similarity=0.356 Sum_probs=67.6
Q ss_pred cEEEEE-CCEEEEEEhhhhhccChhhHhhhc-CCccCcccEEEecCCCHHHHHHHhhheecce--------------eee
Q psy9769 67 DVKLIA-DGVEVAAHKMVLAACSPYFHAMFI-SFEESKQERIVLKGVDPNALKLLIDYVYSCE--------------IYV 130 (1026)
Q Consensus 67 Dv~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~-~~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~--------------~~i 130 (1026)
-|++.. +|..|.+++.+ |..|.+++.|+. ++ +.....|.|++++..+++.+++|+|.-. ..+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 377776 88999999997 789999999998 55 5556789999999999999999998743 256
Q ss_pred chhhHHHHHHHHHhcCc
Q psy9769 131 TEENVQMLLPAANLLQL 147 (1026)
Q Consensus 131 ~~~~v~~ll~~A~~l~l 147 (1026)
+.+.+.+|+.||++|++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 78899999999999975
No 89
>2ckz_B C25, DNA-directed RNA polymerase III 25 KD polypeptide; multiprotein complex, nucleotidyltransferase, nuclear protein, hypothetical protein; 3.2A {Saccharomyces cerevisiae}
Probab=98.22 E-value=1.8e-06 Score=87.17 Aligned_cols=66 Identities=17% Similarity=0.136 Sum_probs=56.1
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc--------------cCcccccccCCEEEEEEEEEeCCeee
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR--------------TLVYTRFVIDTVIVCQILKYEDGELL 1013 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~--------------~~~~~~~~~G~~V~~~Vl~vd~~~~~ 1013 (1026)
.+|+++.|+|++++++|+||++++.++|++|.+++.+++. ++....|++||.|++||.++|..+..
T Consensus 80 ~vGEv~~G~Is~Vt~fGifVeL~g~~eglv~~s~l~~d~~~fd~~~~~~vg~~~e~t~~~~~~Gd~VrvrV~~v~~~~~~ 159 (218)
T 2ckz_B 80 FLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIWPMDEETKLYFDVNEKIRFRIEREVFVDVK 159 (218)
T ss_dssp CTTCEEEEEEEEEETTEEEEECTTSCCCEEEETTTSCTTCEEETTTTEEEEECC--CEEEECTTCEEEEEEEEEEECCCC
T ss_pred CCCCEEEEEEEEEccCcEEEEccCccceEEEcHHHCCCCcEEcCcCceEEeeccccCCcEEcCCCEEEEEEEEEEcccCC
Confidence 5599999999999999999999888999999999976432 33456799999999999999987753
No 90
>2eqs_A ATP-dependent RNA helicase DHX8; S1 domain, OB-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=1.8e-06 Score=76.53 Aligned_cols=75 Identities=13% Similarity=0.120 Sum_probs=64.3
Q ss_pred cccccccCCceEEeeeecccCCcceeeccc--cceeeccCccccc-chh----hhhhcccccccccceeeeeccccceEE
Q psy9769 640 VSLLNLVPGMKVIANICQQLPHGWKAKLKN--TQFKAFISPEAMS-TAY----NAKYLTNKRVDLDCSVLYVCPRHFHVY 712 (1026)
Q Consensus 640 ~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~--~~~~gfi~~~~~~-~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~ 712 (1026)
.....++.|+.+.|+|+++.++|++|++.. .++.||+|.++++ +.+ .+.|++|+++ +++|+.+|+ +++.
T Consensus 5 ~~~~~~~vG~i~~G~V~~v~~fG~FV~l~~~~~~~~Glvhisel~~~~~~~~~~~~~~~Gd~V--~VkV~~vd~--~~i~ 80 (103)
T 2eqs_A 5 SSGEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRV--KVKVLSFTG--TKTS 80 (103)
T ss_dssp CCCSSCCTTCEEEEEEEEECSSCEEEEECSSSSCCEEEECGGGTSSSSCCCCHHHHCCTTCEE--EEEEEEEET--TEEE
T ss_pred cccccCCCCCEEEEEEEEEeccEEEEEEcCCCCCeEEEEEHHHCCCCcccCCcccEeCCCCEE--EEEEEEEEC--CeeE
Confidence 445567899999999999999999999942 2899999999994 332 5679999999 999999998 5999
Q ss_pred eechhh
Q psy9769 713 LSCNEA 718 (1026)
Q Consensus 713 lS~k~~ 718 (1026)
||+++.
T Consensus 81 LSlk~~ 86 (103)
T 2eqs_A 81 LSMKDV 86 (103)
T ss_dssp EESTTB
T ss_pred EEEeec
Confidence 999985
No 91
>3ayh_B DNA-directed RNA polymerase III subunit RPC8; transcription; 2.19A {Schizosaccharomyces pombe}
Probab=98.20 E-value=2.4e-06 Score=85.79 Aligned_cols=64 Identities=22% Similarity=0.186 Sum_probs=55.1
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc-------------------cCcccccccCCEEEEEEEEEe
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR-------------------TLVYTRFVIDTVIVCQILKYE 1008 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~-------------------~~~~~~~~~G~~V~~~Vl~vd 1008 (1026)
.+|+++.|+|++++++|+||++ +.++|++|.+++.+++. ++....|++||.|++||+++|
T Consensus 80 ~~GEv~~G~Vs~vt~~GifV~l-g~~eglv~~~~l~~d~~~fd~~~~~~v~~~~~~~~~~~~~~~~~~Gd~VrvrV~~v~ 158 (203)
T 3ayh_B 80 FRGEVMLGKIKSCSEEGIRVTI-SFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEIRFQIESED 158 (203)
T ss_dssp CTTCEEEEEEEEEETTEEEEEC-SSCCCEEEEGGGBCTTEEEEGGGTEEEEEECCCTTSCCEEEECCTTCEEEEEEEEEE
T ss_pred CCCCEEEEEEEEEeccEEEEEE-eCceEEEEcHHhCCCCceECccCceEEeecccccccccCCcEEcCCCEEEEEEEEEE
Confidence 5699999999999999999999 68999999999976443 445667999999999999999
Q ss_pred CCee
Q psy9769 1009 DGEL 1012 (1026)
Q Consensus 1009 ~~~~ 1012 (1026)
..+.
T Consensus 159 ~~~~ 162 (203)
T 3ayh_B 159 FVDI 162 (203)
T ss_dssp ECC-
T ss_pred cccc
Confidence 7553
No 92
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.18 E-value=1.8e-06 Score=75.29 Aligned_cols=79 Identities=27% Similarity=0.280 Sum_probs=63.3
Q ss_pred EEEEE-CCEEEEEEhhhhhccChhhHhhhc--CC-ccCcccEEEecCCCHHHHHHHhhheecce-----------eeech
Q psy9769 68 VKLIA-DGVEVAAHKMVLAACSPYFHAMFI--SF-EESKQERIVLKGVDPNALKLLIDYVYSCE-----------IYVTE 132 (1026)
Q Consensus 68 v~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~--~~-~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~-----------~~i~~ 132 (1026)
|++.. +|..|.+++.+ |..|.+++.|+. +. .|+....|.|++++..+++.+++|+|... ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 56665 78999999997 789999999998 22 56666789999999999999999998743 35778
Q ss_pred hhHHHHHHHHHhcCc
Q psy9769 133 ENVQMLLPAANLLQL 147 (1026)
Q Consensus 133 ~~v~~ll~~A~~l~l 147 (1026)
+.+.+|+.||++|++
T Consensus 82 ~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 EIALELLMAANFLDC 96 (96)
T ss_dssp TTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCc
Confidence 899999999999875
No 93
>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A
Probab=98.14 E-value=1.5e-07 Score=98.51 Aligned_cols=101 Identities=16% Similarity=0.145 Sum_probs=85.1
Q ss_pred cCCceEEeeeecccCCcceeeccc-cceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechhhhh
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKN-TQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEALL 720 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~-~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~l~ 720 (1026)
++|+.+.|+|.++.++|++|++.. +++.||+|.+++++.+ .+.+++|+++ +++|+.+|+.++++.||+++..
T Consensus 10 ~~Gdiv~G~V~~I~~fGaFV~L~e~~gieGlIhiSels~~~v~~~~~~~kvGd~V--~vkVi~vD~~~~~I~LSlk~~~- 86 (275)
T 3aev_A 10 EEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKV--VAKVIRVDPRKGHIDLSLRRVT- 86 (275)
T ss_dssp CTTCEEEEEEEEEETTEEEEEETTSTTCEEEEEGGGSCSSCCSCGGGTCCTTCEE--EEEEEEEETTTTEEEEESTTCC-
T ss_pred CCCCEEEEEEEEEECcEEEEEECCCCCeEEEEEHHHcCcccccCHHhccCCCCEE--EEEEEEEECCCCEEEEEEeecC-
Confidence 579999999999999999999952 5899999999999766 5679999999 9999999999999999999853
Q ss_pred hcccCCCCcceeeeeceeeeeeeccccccc-cccC
Q psy9769 721 ERQTGRPEFSVCISIVKKTIFEDSSVSGTE-AVNQ 754 (1026)
Q Consensus 721 ~~~~~~~~~~~~~~~~~g~v~~~~~v~~v~-~~g~ 754 (1026)
+++|....+.+..|+.+.+. +..+. .+|.
T Consensus 87 ----~~~~~~~~~~~~~g~~v~g~-v~~v~~~~G~ 116 (275)
T 3aev_A 87 ----QQQRKAKLQEFKRAQKAENL-LRLAAEKLGK 116 (275)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHTC
T ss_pred ----cchhHHHHHhccCCCeEEEE-EEEchhhcCC
Confidence 34555566677778887776 77777 6675
No 94
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.09 E-value=5.8e-06 Score=80.32 Aligned_cols=99 Identities=18% Similarity=0.315 Sum_probs=78.0
Q ss_pred cEEEEE-CCEEEEEEhhhhhccChhhHhhhcCC-c----cCcccEEEecCCCHHHHHHHhhheecce-------------
Q psy9769 67 DVKLIA-DGVEVAAHKMVLAACSPYFHAMFISF-E----ESKQERIVLKGVDPNALKLLIDYVYSCE------------- 127 (1026)
Q Consensus 67 Dv~i~v-~~~~~~~Hr~vL~~~S~yF~~mf~~~-~----e~~~~~i~l~~~~~~~f~~~l~~~Ytg~------------- 127 (1026)
-|+|+. +|..|.+++.+ +..|.+++.|+... . +.....|.|++++..++..+++|++.-.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466765 68999999998 66899999999822 2 1233689999999999999999997532
Q ss_pred ------------eeechhhHHHHHHHHHhcCchhHHhHHHHhhhcccCCcc
Q psy9769 128 ------------IYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLHPTN 166 (1026)
Q Consensus 128 ------------~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~n 166 (1026)
+.++.+.+.+|+.||++|++..|.+.|+..+...+.-.+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgkt 137 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRS 137 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCC
Confidence 235668899999999999999999999999877654433
No 95
>1k0r_A NUSA; two component arrangement, S1 domain, two K-homology domains., structural genomics, PSI, protein structure initiative; 1.70A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1
Probab=97.98 E-value=8.8e-06 Score=87.20 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=56.6
Q ss_pred CCccccCCCCcEEEEEEEE----EecceEEEEeCC---CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC---
Q psy9769 941 LTSVKHTKPGRLVWGVLKE----KMPGGVRVEFDG---DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG--- 1010 (1026)
Q Consensus 941 ~~~~~~~~~G~~v~G~V~~----i~~~G~fV~~~~---~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~--- 1010 (1026)
+..|. .++|++|+|+|.+ +.+.++||.+++ +++|++|++|+ -|.+.|++||.|+|.|++|++.
T Consensus 123 ~~ef~-~r~GeIVtG~V~r~~~~v~~~~v~VdLG~~~~k~EgiLP~~Eq------iP~E~~~~GDrVkvyV~~V~~~~kg 195 (366)
T 1k0r_A 123 YGEFS-TREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQ------VPGESYEHGNRLRCYVVGVTRGARE 195 (366)
T ss_dssp ----C-CCTTCEEEEEEECCHHHHHTTCEEEEECCSSSCEEEEECGGGS------CTTCCCCTTCEEEEEEEEEECCSSS
T ss_pred HHHHH-hcCCCEEEEEEEEccccccCCeEEEEeCCCccceEEEEcHHHc------CCCccCCCCCEEEEEEEEEecCCCc
Confidence 44443 3479999999999 999999999976 59999999998 3678999999999999999986
Q ss_pred -eeeech
Q psy9769 1011 -ELLLTE 1016 (1026)
Q Consensus 1011 -~~~~~~ 1016 (1026)
.+.||-
T Consensus 196 pqI~LSR 202 (366)
T 1k0r_A 196 PLITLSR 202 (366)
T ss_dssp CEEEEES
T ss_pred cEEEEEe
Confidence 366663
No 96
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.98 E-value=1.6e-05 Score=70.80 Aligned_cols=92 Identities=12% Similarity=0.227 Sum_probs=75.3
Q ss_pred EEEEECCEEEEEEhhhhhccC-hhhHhhhc-CCc----cCcccEEEecCCCHHHHHHHhhheecceeeechhh-HHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACS-PYFHAMFI-SFE----ESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEEN-VQMLLP 140 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S-~yF~~mf~-~~~----e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~~-v~~ll~ 140 (1026)
|+|.|+|+.|...+..|+... .+|.+||+ ... .....++-+ +-+|..|+.+|+|+.+|.+.++.+- ...++.
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~ 86 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE 86 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHHH
Confidence 788999999999999999875 47889987 311 113345666 6899999999999999998876543 478999
Q ss_pred HHHhcCchhHHhHHHHhhhc
Q psy9769 141 AANLLQLTDVRDACCDFLQC 160 (1026)
Q Consensus 141 ~A~~l~l~~L~~~c~~~l~~ 160 (1026)
-|++|++++|.+.|.+.|.+
T Consensus 87 Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 87 EAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHhc
Confidence 99999999999999987754
No 97
>2id0_A Exoribonuclease 2; RNAse, exonuclease, hydrolyase, mRNA decay, RNR family, hydrolase; 2.35A {Escherichia coli} SCOP: b.40.4.5 b.40.4.5 b.40.4.5 b.40.4.16 PDB: 2ix0_A* 2ix1_A
Probab=97.97 E-value=8e-06 Score=97.16 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=57.7
Q ss_pred ccCCCCc--EEEEEEEEEecceEEEEeC-CCceeeEeccccCc--cc-----------ccCcccccccCCEEEEEEEEEe
Q psy9769 945 KHTKPGR--LVWGVLKEKMPGGVRVEFD-GDISGVFPTSAMSQ--AT-----------RTLVYTRFVIDTVIVCQILKYE 1008 (1026)
Q Consensus 945 ~~~~~G~--~v~G~V~~i~~~G~fV~~~-~~i~Gl~~~~~ls~--~~-----------~~~~~~~~~~G~~V~~~Vl~vd 1008 (1026)
-+.++|+ +++|+|++|++||+||++. .|++||||.++|++ +. + +....|++||+|+++|++||
T Consensus 554 l~~~vGe~~~f~g~V~~V~~~G~fV~L~~~gieGlVhis~l~~~~d~~~~d~~~~~l~~-~~~~~~~lGD~V~VkV~~vd 632 (644)
T 2id0_A 554 LKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQI-KGETVYKVTDVIDVTIAEVR 632 (644)
T ss_dssp HGGGTTSCCCEEEEEEEEETTEEEEEETTTCCEEEEEGGGTCSCGGGEEEETTTTEEEE-TTEEEEETTCEEEEEEEEEE
T ss_pred hhhccCCCceEEEEEEEEeCCceEEEEcCCcEEEEEEchhccCcCceeEEcccccEEEe-cCCCEeCCCCEEEEEEEEEe
Confidence 3446799 9999999999999999995 69999999999973 11 2 45678999999999999999
Q ss_pred CCeeee
Q psy9769 1009 DGELLL 1014 (1026)
Q Consensus 1009 ~~~~~~ 1014 (1026)
+.+.++
T Consensus 633 ~~~~~I 638 (644)
T 2id0_A 633 METRSI 638 (644)
T ss_dssp TTTTEE
T ss_pred CCCCEE
Confidence 875554
No 98
>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=97.86 E-value=3.6e-06 Score=100.32 Aligned_cols=83 Identities=6% Similarity=-0.021 Sum_probs=37.9
Q ss_pred ccccCCceEEeeeecccCCcceeeccccceeeccCcccc----cchh----hhhhcccccccccceeeeeccccceEEee
Q psy9769 643 LNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAM----STAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLS 714 (1026)
Q Consensus 643 ~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~----~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS 714 (1026)
..++.|+.++|+|.++.++|++|++ ..|..||+|.+++ ++.+ .+.|++|+++ +++|+.+|+ ++++.||
T Consensus 663 ~~~~vG~i~~G~V~~i~~fGaFV~l-~~g~eGLvHiSel~~~~s~~rv~~~~~~~~vGd~V--~VkVi~vd~-~grI~LS 738 (757)
T 1e3p_A 663 TSPEVGERILGSVVKTTTFGAFVSL-LPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKV--QVEIAEIDS-RGKLSLI 738 (757)
T ss_dssp ----------CBEEECC-CSCEECC-C---CCCCC-------------------CCSSCBC--CCCCCCCCS-SCC----
T ss_pred hhcccccEEEEEEEEccccEEEEEE-cCCcEEEEEhHHhccccCCCcccCcccccCCCCEE--EEEEEEECC-CCCEEEE
Confidence 5678999999999999999999999 4789999999999 7765 5779999999 999999999 9999999
Q ss_pred chhhhhhcccCCCCcceeee
Q psy9769 715 CNEALLERQTGRPEFSVCIS 734 (1026)
Q Consensus 715 ~k~~l~~~~~~~~~~~~~~~ 734 (1026)
+++. .+++|.....+
T Consensus 739 ~k~~-----~~~pw~~~~~~ 753 (757)
T 1e3p_A 739 PVIE-----GEEAASDEKKD 753 (757)
T ss_dssp --------------------
T ss_pred EecC-----CCCchhhhhhc
Confidence 9985 45666554333
No 99
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=97.84 E-value=2.7e-05 Score=88.19 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=57.7
Q ss_pred CCCcEEEEEEEEEecc--eEEEEeCCCceeeEeccccCcccc---------cCcccccccCCEEEEEEEEEeC--Ceeee
Q psy9769 948 KPGRLVWGVLKEKMPG--GVRVEFDGDISGVFPTSAMSQATR---------TLVYTRFVIDTVIVCQILKYED--GELLL 1014 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~--G~fV~~~~~i~Gl~~~~~ls~~~~---------~~~~~~~~~G~~V~~~Vl~vd~--~~~~~ 1014 (1026)
.+|+++.|+|++|.++ |+||++++|-.||+|.+++++.+. .++++.+++||+|.++|++... +.-+|
T Consensus 44 ~vGnIY~GkV~rv~p~~~aAFVdiG~gk~gfLhisei~~~~~~~~~~~~~~~~i~d~lk~Gq~VlVQV~Ke~~g~KGa~l 123 (517)
T 2bx2_L 44 KKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAAL 123 (517)
T ss_dssp CTTCEEEEEEEEEETTTTEEEEESSSSSCEEEEGGGSCGGGCC-------CCCGGGTCCTTCEEEEEEEECCCTTCCCEE
T ss_pred CCCCEEEEEEEEeccCCceEEEEeCCCcEEEEEHHHcChhhhccccccccccchhhhccCCCEEEEEEEeeccccCCceE
Confidence 5699999999999999 999999999999999999987652 3466889999999999999664 33345
Q ss_pred c
Q psy9769 1015 T 1015 (1026)
Q Consensus 1015 ~ 1015 (1026)
|
T Consensus 124 T 124 (517)
T 2bx2_L 124 T 124 (517)
T ss_dssp E
T ss_pred E
Confidence 4
No 100
>2asb_A Transcription elongation protein NUSA; protein-RNA complex, transcription/RNA complex; 1.50A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 PDB: 2atw_A
Probab=97.80 E-value=2.8e-05 Score=78.57 Aligned_cols=63 Identities=21% Similarity=0.371 Sum_probs=55.8
Q ss_pred CCCcEEEEEEEE----EecceEEEEeCC---CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC----eeeech
Q psy9769 948 KPGRLVWGVLKE----KMPGGVRVEFDG---DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG----ELLLTE 1016 (1026)
Q Consensus 948 ~~G~~v~G~V~~----i~~~G~fV~~~~---~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~----~~~~~~ 1016 (1026)
++|++|+|+|.+ +.+..++|.++. +++|++|++|+ -|.+.|++||+|+|.|++|+.. .+.||-
T Consensus 6 r~GeIVtG~V~r~~~~v~~~~ViVdlG~~~~k~EgiLP~~Eq------ip~E~~~~GDrIkayV~~V~~~~~gpqIiLSR 79 (251)
T 2asb_A 6 REGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQ------VPGESYEHGNRLRCYVVGVTRGAREPLITLSR 79 (251)
T ss_dssp CTTCEEEEEEECCHHHHHTTCEEEEECSSSSCEEEEECGGGS------CTTCCCCTTCEEEEEEEEEECCSSSCEEEEES
T ss_pred cCCCEEEEEEEEccccccCCeEEEEeCCCCcceEEEEcHHHc------CCCccCCCCCEEEEEEEEEEcCCCCCEEEEEe
Confidence 469999999999 888899999976 59999999998 4788999999999999999985 467763
No 101
>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B*
Probab=97.79 E-value=1.4e-05 Score=83.47 Aligned_cols=93 Identities=19% Similarity=0.147 Sum_probs=77.5
Q ss_pred cccCCceEEeeeecccCCcceeecc-ccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechhh
Q psy9769 644 NLVPGMKVIANICQQLPHGWKAKLK-NTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNEA 718 (1026)
Q Consensus 644 ~l~~G~~v~~~V~~v~~~G~~v~~~-~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~~ 718 (1026)
.+..|+.+.|+|.++.++|++|++. +++..||+|.+++++.+ .+.+++||++ +++|+.+|+.++++.||+++.
T Consensus 8 ~~~vG~iv~G~V~~I~~~GaFV~l~e~~~~~GlihiSels~~~v~~~~~~~~vGd~V--~VkVi~vd~~~g~I~LSlk~~ 85 (266)
T 3cw2_C 8 LPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENRKV--IVKVIRVDRRKGTVDVSLKKV 85 (266)
T ss_dssp SCCTTCEEEEEEEECCSSSBEEEETTTTSEECBBCGGGSSCSSCCCHHHHSCTTCEE--EEEECCCCSSSCCCBEESTTS
T ss_pred cCCCCCEEEEEEEEEeccEEEEEEcCCCCeEEEEEhHHcCcccccCHHHhCcCCCEE--EEEEEEEeCCCCEEEEEEEec
Confidence 4578999999999999999999994 26899999999998766 5679999999 999999999999999999985
Q ss_pred hhhcccCCCCcceeeeeceeeeeee
Q psy9769 719 LLERQTGRPEFSVCISIVKKTIFED 743 (1026)
Q Consensus 719 l~~~~~~~~~~~~~~~~~~g~v~~~ 743 (1026)
.+++|....+.+..|+....
T Consensus 86 -----~~~~~~~~~~~~~~~~~~~~ 105 (266)
T 3cw2_C 86 -----TDDERRKKNLQWKKIQRLDK 105 (266)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHH
T ss_pred -----chhhHHHHHHhccccCccce
Confidence 34666666666666554433
No 102
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=97.68 E-value=3e-05 Score=96.70 Aligned_cols=79 Identities=13% Similarity=0.117 Sum_probs=72.1
Q ss_pred cccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh-----hhhhcccccccccceeeeeccccceEEee
Q psy9769 640 VSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY-----NAKYLTNKRVDLDCSVLYVCPRHFHVYLS 714 (1026)
Q Consensus 640 ~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~-----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS 714 (1026)
.+.+++++|+++.|+|+++.++|++|.+ ..|+.|+++.+++++.+ .+.+++||.| +|+|+.||+.++++.||
T Consensus 895 et~~~l~~G~iv~G~V~~V~~fGaFV~L-~~gveGLVHiSelsd~~~v~~p~~v~kvGd~V--~vkVl~VD~~~~rI~LS 971 (1219)
T 3psi_A 895 ESEKTFFKGSIIPVRVERFWHNDIICTT-NSEVECVVNAQRHAGAQLRRPANEIYEIGKTY--PAKVIYIDYANITAEVS 971 (1219)
T ss_dssp CCTTTSCTTCEEEEEEEEECSSCEEEEC-TTSCEEEECTTSSSSTTSCSCSTTTSCTTCEE--EEEEEEEEGGGTEEEEE
T ss_pred CcHhhCCCCCEEEEEEEEEecceEEEEe-CCCceEEEEHHHcCCCcccCCHHHcCCCCCEE--EEEEEEEECCCCEEEEE
Confidence 4668899999999999999999999999 47899999999999865 5679999999 99999999999999999
Q ss_pred chhhhhh
Q psy9769 715 CNEALLE 721 (1026)
Q Consensus 715 ~k~~l~~ 721 (1026)
+++.-++
T Consensus 972 lk~~dl~ 978 (1219)
T 3psi_A 972 LLDHDVK 978 (1219)
T ss_dssp CCHHHHC
T ss_pred ecHHHhc
Confidence 9997664
No 103
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.67 E-value=4.8e-05 Score=68.03 Aligned_cols=80 Identities=28% Similarity=0.305 Sum_probs=63.5
Q ss_pred cEEEE-ECCEEEEEEhhhhhccChhhHhhhcC---CccCcccEEEecCCCHHHHHHHhhheecce-----------eeec
Q psy9769 67 DVKLI-ADGVEVAAHKMVLAACSPYFHAMFIS---FEESKQERIVLKGVDPNALKLLIDYVYSCE-----------IYVT 131 (1026)
Q Consensus 67 Dv~i~-v~~~~~~~Hr~vL~~~S~yF~~mf~~---~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~-----------~~i~ 131 (1026)
-|+|. .+|..|.+++.+ |..|..++.|+.+ +.|.....|.|++++..+++.+++|++... ..++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 37777 478999999995 6689999999982 345556789999999999999999997643 3578
Q ss_pred hhhHHHHHHHHHhcCc
Q psy9769 132 EENVQMLLPAANLLQL 147 (1026)
Q Consensus 132 ~~~v~~ll~~A~~l~l 147 (1026)
.+.+.+|+.||++|++
T Consensus 97 ~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 PEIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8899999999999975
No 104
>2nn6_H Exosome complex exonuclease RRP4; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=97.60 E-value=3.2e-05 Score=81.90 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=60.5
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcc-c---c------cCcccccccCCEEEEEEEEEeC-Ceeeech
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQA-T---R------TLVYTRFVIDTVIVCQILKYED-GELLLTE 1016 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~-~---~------~~~~~~~~~G~~V~~~Vl~vd~-~~~~~~~ 1016 (1026)
++|++|.|.|+.+.++|+||++.....|++|.++++.. . . .+..+.|++||.|+|+|++++. .++.||-
T Consensus 94 ~vGDvViG~Vt~V~~~~a~VdI~s~~~~~l~iS~v~f~gg~iR~~~~~D~~~m~~~l~vGDlV~ArVisv~~~~~i~LSt 173 (308)
T 2nn6_H 94 EVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHT 173 (308)
T ss_dssp CSSBCCCEEEEEEETTEEEEECSSSSCEEEESSCCC-------------CHHHHHHSCSSCEECCEEEEEETTTEEEEEC
T ss_pred CCCCEEEEEEEEEeCceEEEEECCCcCCceechhhccccceeecccchhhhhhhccCCCCCEEEEEEEEcCCCCCEEEEe
Confidence 45999999999999999999998778999999998752 2 2 2345789999999999999985 5677776
Q ss_pred hhhhhhc
Q psy9769 1017 ADEKLHK 1023 (1026)
Q Consensus 1017 ~~~~~~~ 1023 (1026)
.+..|-+
T Consensus 174 r~~~LGk 180 (308)
T 2nn6_H 174 RSLKYGK 180 (308)
T ss_dssp CSSTTCE
T ss_pred cCcCCcc
Confidence 6655543
No 105
>1hh2_P NUSA, N utilization substance protein A; transcription regulation, termination; 2.1A {Thermotoga maritima} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1 PDB: 1l2f_A
Probab=97.59 E-value=3.6e-05 Score=82.48 Aligned_cols=112 Identities=8% Similarity=0.071 Sum_probs=84.2
Q ss_pred cccccCceEEEEEeeeeeccceeEEEEechHHHHhhhccCCCccccccccc--CCceEEeeeecccCCcceeecccccee
Q psy9769 596 DSVILGQIVTCMISKIKVAASMSILEVTLDEELIRSANRLSPSQVSLLNLV--PGMKVIANICQQLPHGWKAKLKNTQFK 673 (1026)
Q Consensus 596 ~~~~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~~~~~~~~~~~~~~~~l~--~G~~v~~~V~~v~~~G~~v~~~~~~~~ 673 (1026)
.++.+|+.+++.|...+-. + +.+...+..+............++.+. .|++|+|+|.++.++|++|++ ++..
T Consensus 85 ~~~~vGd~ie~~I~~~dfg--R--~aa~~aKqvi~qkireaere~i~~e~~~~~GeIV~G~V~ri~~~~v~VDl--Gk~E 158 (344)
T 1hh2_P 85 PLAEVGSIVKKELNVKNFG--R--IAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRVMGEWADIRI--GKLE 158 (344)
T ss_dssp TTCCTTCEEEEECCCCCSS--S--CSGGGHHHHHHHHHHHHTTCCSSCCTTCCTTCEEEEEEEEECSSEEEEEE--TTEE
T ss_pred ccccCCCEEEEEEccccCc--c--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEEEecCcEEEEe--CCeE
Confidence 3488999999999776543 2 233333333332222333444556665 899999999999999999999 6899
Q ss_pred eccCcccccchhhhhhcccccccccceeeeeccccc--eEEeechh
Q psy9769 674 AFISPEAMSTAYNAKYLTNKRVDLDCSVLYVCPRHF--HVYLSCNE 717 (1026)
Q Consensus 674 gfi~~~~~~~~~~~~~~~G~~~~~~~~Il~vd~~~~--~v~lS~k~ 717 (1026)
|++|.+++++ .+.|++|+++ ++.|+.+++.++ ++.||+..
T Consensus 159 giLp~sE~ip--~E~~~vGD~V--kv~V~~V~~~~kg~~I~LSRt~ 200 (344)
T 1hh2_P 159 TRLPKKEWIP--GEEIKAGDLV--KVYIIDVVKTTKGPKILVSRRV 200 (344)
T ss_dssp EEEEGGGSCT--TCCCCTTCEE--EEEEEEEEEETTEEEEEEESSS
T ss_pred EEEeHHHcCC--CcCCCCCCEE--EEEEEEEEcCCCCcEEEEEeec
Confidence 9999999874 4689999999 999999997765 78888884
No 106
>2ja9_A Exosome complex exonuclease RRP40; RNA-binding protein, RNA, S1 domain, KH domain, hydrolase, RNA-binding, nuclear protein; 2.20A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.51.1.1
Probab=97.57 E-value=0.00014 Score=70.37 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=57.9
Q ss_pred CCCcEEEEEEEEEecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC-eeeec
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG-ELLLT 1015 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~-~~~~~ 1015 (1026)
.+|++|.|.|+.+.+++.+|.+.. ..+|++|.+++.- ..++....|++||.|.|+|.+++.+ +..||
T Consensus 6 ~~gDvViG~V~~v~~~~~~VdI~~~~~~a~L~~s~~~g-~~k~~r~~l~~GDlV~ArV~~~~~~~~~~Lt 74 (175)
T 2ja9_A 6 SVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFPN-ASKKNRPTLQVGDLVYARVCTAEKELEAEIE 74 (175)
T ss_dssp CTTCEEEEEEEEECSSEEEEESSTTSCCEEEETTSSTT-CCSSSCCCCCTTCEEEEEEEECCTTSCCEEE
T ss_pred CCcCEEEEEEEEEECcEEEEEECCCCccEEEEHHHCCc-hhhhhhccCCCCCEEEEEEEEecCCCceEEE
Confidence 349999999999999999999998 7999999998852 3345677899999999999999874 67776
No 107
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=97.54 E-value=4.1e-05 Score=91.52 Aligned_cols=76 Identities=20% Similarity=0.147 Sum_probs=69.2
Q ss_pred ccccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEee
Q psy9769 639 QVSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLS 714 (1026)
Q Consensus 639 ~~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS 714 (1026)
..+++++.+|+++.|+|++|.++|++|+++ .+..|+++.+++++.+ .+.|++|+.| +++|+.||+.++++.||
T Consensus 646 ve~~~~l~vG~iv~G~V~~V~~fGaFV~l~-~~~eGLVhiS~Lsd~~v~d~~~~~~vGd~V--~VkVi~VD~~~~rI~LS 722 (785)
T 3bzc_A 646 VESLKDLKPGMVLEGVVTNVTNFGAFVDIG-VHQDGLVHISALSEKFVKDPYEVVKAGDIV--KVKVMEVDIPRNRVGLS 722 (785)
T ss_dssp CCSSTTCCTTCBCCCEEEEEETTEEEEECS-SSSEEEEETTTSCSSCCSCHHHHCCTTCCC--CCBEEEEETTTTEEEEC
T ss_pred ccchhhcCCCCEEEEEEEEEecCCeEEEeC-CCcEEEEEHHHcCccccCChhheeCCCCEE--EEEEEEEECCCCEEEEE
Confidence 356778899999999999999999999994 6899999999998765 5679999999 99999999999999999
Q ss_pred chh
Q psy9769 715 CNE 717 (1026)
Q Consensus 715 ~k~ 717 (1026)
++.
T Consensus 723 lk~ 725 (785)
T 3bzc_A 723 MRM 725 (785)
T ss_dssp CSS
T ss_pred Eec
Confidence 996
No 108
>2wp8_J Exosome complex exonuclease DIS3; nucleus, hydrolase, RNA-binding, exonucle binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae}
Probab=97.49 E-value=9.7e-05 Score=91.18 Aligned_cols=60 Identities=10% Similarity=0.071 Sum_probs=52.6
Q ss_pred CcEEEEEEEEEecceEEEEeCC-CceeeEeccccC--ccc-----------ccC----cccccccCCEEEEEEEEEeC
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMS--QAT-----------RTL----VYTRFVIDTVIVCQILKYED 1009 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls--~~~-----------~~~----~~~~~~~G~~V~~~Vl~vd~ 1009 (1026)
|++..|+|++|+++|+||++++ |++|+||.++|+ ++. .++ +...|++||.|+++|+++|.
T Consensus 887 ge~~~g~V~~V~~~G~fV~L~~~giEGlVhis~L~~~~d~y~fde~~~~L~g~~~~g~~~~~~~lGD~V~VkV~~vd~ 964 (977)
T 2wp8_J 887 ESTETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKVEVQVRSVMD 964 (977)
T ss_dssp TCEEEEEEEEECSSEEEEECTTTCCEEEEEGGGTCSCGGGCEEETTTTEEEECCTTCCSCEEEETTCEEEEEECCCCC
T ss_pred ceEEEEEEEEEcCCeEEEEEcCCCeEEEEEeccccCCCceeEEcccccEEEeecCCCccCcEEccCCEEEEEEEEEcC
Confidence 9999999999999999999998 999999999997 332 122 45789999999999999987
No 109
>3cdi_A Polynucleotide phosphorylase; mRNA turnover, RNAse, RNA degradation, kinase, transferase; 2.60A {Escherichia coli} PDB: 1sro_A
Probab=97.40 E-value=2.3e-05 Score=93.17 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=0.0
Q ss_pred cccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeechh
Q psy9769 642 LLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNE 717 (1026)
Q Consensus 642 ~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~ 717 (1026)
...++.|+.++|+|.++.++|++|++ ..+..||+|.+++++.+ .+.+++|+++ +++|+.+|+ ++++.||+++
T Consensus 622 ~~~~~vG~i~~G~V~~i~~fGaFVel-~~g~eGLvHiSel~~~~v~~~~~~~~vGd~V--~VkVi~vd~-~grI~LS~k~ 697 (723)
T 3cdi_A 622 TAEIEVGRVYTGKVTRIVDFGAFVAI-GGGKEGLVHISQIADKRVEKVTDYLQMGQEV--PVKVLEVDR-QGRIRLSIKE 697 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcCcEEEEEEEEEecceEEEEe-CCCceEEEEHHHcCCccccCcccccCCCCEE--EEEEEEECC-CCcEEEEEEe
Confidence 45678999999999999999999999 47899999999999865 5679999999 999999999 8999999998
Q ss_pred hh
Q psy9769 718 AL 719 (1026)
Q Consensus 718 ~l 719 (1026)
..
T Consensus 698 ~~ 699 (723)
T 3cdi_A 698 AT 699 (723)
T ss_dssp --
T ss_pred cc
Confidence 53
No 110
>2vnu_D Exosome complex exonuclease RRP44; hydrolase-RNA complex, RNA degradation, RNA-binding, RNA Pro; HET: 1PE; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.5 b.40.4.5 b.40.4.5 b.40.4.16
Probab=97.40 E-value=0.00015 Score=87.95 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=47.7
Q ss_pred cEEEEEEEEEecceEEEEeCC-CceeeEeccccC--ccc-----------ccC----cccccccCCEEEEEEEEEeCC
Q psy9769 951 RLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMS--QAT-----------RTL----VYTRFVIDTVIVCQILKYEDG 1010 (1026)
Q Consensus 951 ~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls--~~~-----------~~~----~~~~~~~G~~V~~~Vl~vd~~ 1010 (1026)
+++.|+|++|+++|+||++++ |++|+||.++|+ ++. ..+ +...|++||.|+++|++||.+
T Consensus 671 ~~~~g~V~~V~~~G~fV~l~~~giEGlVhis~L~~~~d~~~fd~~~~~l~g~~~~~~~~~~~~lGD~V~VkV~~vd~~ 748 (760)
T 2vnu_D 671 STETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKVEVQVRSVMDP 748 (760)
T ss_dssp SEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHCSCGGGCEEETTTTEEEECCTTCSSCEEEETTCEEEEEEC-----
T ss_pred eEEEEEEEEEECCeEEEEEeCCCcEEEEEeccccCCCceeEEcccccEEEEecCCCccCcEEecCCEEEEEEEEEECc
Confidence 799999999999999999998 999999999996 322 123 257899999999999999986
No 111
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=97.39 E-value=2.4e-05 Score=96.04 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=1.0
Q ss_pred cccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh-----hhhhcccccccccceeeeeccccceEEee
Q psy9769 640 VSLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY-----NAKYLTNKRVDLDCSVLYVCPRHFHVYLS 714 (1026)
Q Consensus 640 ~~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~-----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS 714 (1026)
.+.+++++|+++.|+|+++.++|++|.+ ..|+.|++|.+++++.+ .+.|++||.| +|+|+.||+.++++.||
T Consensus 898 et~~~l~~G~iv~G~V~~V~~fGaFV~L-~~gveGLVHiSelsd~~~v~~~~~v~kvGd~V--~vkVl~VD~~~~rI~LS 974 (1030)
T 3psf_A 898 ESEKTFFKGSIIPVRVERFWHNDIICTT-NSEVECVVNAQRHAGAQLRRPANEIYEIGKTY--PAKVIYIDYANITAEVS 974 (1030)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccHHHhcCCCEEEEEEEEEccCeEEEEe-CCCcEEEEEHHHcCCCcccCCHHHcCCCCCEE--EEEEEEEECCCCEEEEE
Confidence 4568899999999999999999999999 47899999999999865 5679999999 99999999999999999
Q ss_pred chhhhh
Q psy9769 715 CNEALL 720 (1026)
Q Consensus 715 ~k~~l~ 720 (1026)
+++.-+
T Consensus 975 lk~~dl 980 (1030)
T 3psf_A 975 LLDHDV 980 (1030)
T ss_dssp ------
T ss_pred echHHh
Confidence 998644
No 112
>1go3_E DNA-directed RNA polymerase subunit E; transferase, transferase, transcription; 1.75A {Methanococcus jannaschii} SCOP: b.40.4.5 d.230.1.1
Probab=97.36 E-value=0.00013 Score=72.71 Aligned_cols=70 Identities=9% Similarity=0.094 Sum_probs=60.4
Q ss_pred ccCCceEEeeeecccCCcceeeccccceeeccCcccccchh---------------hhhhcccccccccceeeeeccccc
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY---------------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~---------------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
...|++++|+|+++.++|++|++ +++.|+++.+++++.+ .+.|++|+++ +++|+.+|+.++
T Consensus 79 ~~~Gev~~G~V~~v~~~G~fV~l--~~~eglvhis~l~~~~~~~d~~~~~~~~~~~~~~~~~Gd~V--~vkV~~vd~~~~ 154 (187)
T 1go3_E 79 PEMYELIEGEVVDVVEFGSFVRL--GPLDGLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIGDYV--RARIVAISLKAE 154 (187)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEC--SSSEEEEEGGGSCSSCEEECCC--CEEETTTCCEECTTCEE--EEEEEEEECCC-
T ss_pred cCCCCEEEEEEEEEeCcEEEEEE--cCccEEEEhHHhCCCcceECCccceEEecCCCeEEcCCCEE--EEEEEEEEcccC
Confidence 46899999999999999999999 5699999998887532 3569999999 999999998766
Q ss_pred -----eEEeechhh
Q psy9769 710 -----HVYLSCNEA 718 (1026)
Q Consensus 710 -----~v~lS~k~~ 718 (1026)
++.||+++.
T Consensus 155 ~p~~~~I~lS~k~~ 168 (187)
T 1go3_E 155 RKRGSKIALTMRQP 168 (187)
T ss_dssp ----CEEEEECCST
T ss_pred CCCccEEEEEEcCC
Confidence 999999984
No 113
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=97.32 E-value=0.00017 Score=72.49 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=63.8
Q ss_pred cccCCceEEeeeecccCCcceeecc-------ccceeeccCcccccchh------hhhhcccccccccceeeeeccccce
Q psy9769 644 NLVPGMKVIANICQQLPHGWKAKLK-------NTQFKAFISPEAMSTAY------NAKYLTNKRVDLDCSVLYVCPRHFH 710 (1026)
Q Consensus 644 ~l~~G~~v~~~V~~v~~~G~~v~~~-------~~~~~gfi~~~~~~~~~------~~~~~~G~~~~~~~~Il~vd~~~~~ 710 (1026)
...+|++|.|+|+++.++|++|++. ..++.|+|+.+++++.. .+.|++|+.+ +|+|+.+|...++
T Consensus 78 ~p~vGDvV~G~V~~v~~~~a~V~I~~v~~~~L~~~~~GlIhisei~~~~~~~~~~~~~l~~GD~V--~akVisi~~~~~~ 155 (209)
T 2nn6_I 78 LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIV--LAKVISLGDAQSN 155 (209)
T ss_dssp CCCTTCEEEEEEEEECSSEEEEEEEESSSSCCCCSSCSCEEEEGGGTCSSCCCCGGGTCCSSSEE--EEEEEEEETTTTE
T ss_pred CCCCCCEEEEEEEEEECceEEEEECccccccccCCceeEEEHHHcccccccccchhhhcCCCCEE--EEEEEEEeCCCCe
Confidence 5689999999999999999999983 24689999998888655 4459999999 9999999998889
Q ss_pred EEeechhh
Q psy9769 711 VYLSCNEA 718 (1026)
Q Consensus 711 v~lS~k~~ 718 (1026)
+.||.++.
T Consensus 156 i~LS~k~~ 163 (209)
T 2nn6_I 156 YLLTTAEN 163 (209)
T ss_dssp EEEECCSS
T ss_pred EEEEEecC
Confidence 99999984
No 114
>4ayb_E DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2y0s_E 4b1o_E 4b1p_T 2waq_E 2wb1_E 2pmz_E 3hkz_E
Probab=97.26 E-value=0.00018 Score=71.11 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=59.0
Q ss_pred ccCCceEEeeeecccCCcceeeccccceeeccCcccccchh---------------hhhhcccccccccceeeeecccc-
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY---------------NAKYLTNKRVDLDCSVLYVCPRH- 708 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~---------------~~~~~~G~~~~~~~~Il~vd~~~- 708 (1026)
...|++++|+|+++.++|++|++ +++.|+++.++++..+ ...|++|+++ ++||+.+|++.
T Consensus 79 p~~Gev~~G~V~~v~~~G~fv~l--~~~~glvh~s~l~~d~~~~d~~~~~~~g~~~~~~~~~Gd~V--rvkV~~v~~~~~ 154 (180)
T 4ayb_E 79 PVVQEVVEGEVLQVDNYGVFVNL--GPMDGLVHISQITDDTLKYDNVRGIIFGEKSKKVIQKGDKV--RARVISVASTVT 154 (180)
T ss_dssp CCTTCEEEEEEEEEETTEEEEEC--SSSEEEEEGGGSCSSCEEECSSSCCEEETTTCCCCCTTCEE--EEEEEEECC---
T ss_pred ccCCCEEEEEEeeeccceEEEEE--CCccceEEeeecCCCccccchhcceEEEeccCeEECCCCEE--EEEEEEEeCCCC
Confidence 46899999999999999999998 6799999888887653 3468999999 99999999753
Q ss_pred ---ceEEeechhh
Q psy9769 709 ---FHVYLSCNEA 718 (1026)
Q Consensus 709 ---~~v~lS~k~~ 718 (1026)
.++.||+|+.
T Consensus 155 ~~~~rI~ls~k~~ 167 (180)
T 4ayb_E 155 GRLPRIALTMRQP 167 (180)
T ss_dssp ----CEEEECCST
T ss_pred cccCcEEEEcCCC
Confidence 4899999984
No 115
>4aid_A Polyribonucleotide nucleotidyltransferase; transferase-peptide complex; 2.60A {Caulobacter vibrioides} PDB: 4aim_A 4am3_A
Probab=97.16 E-value=6.1e-05 Score=88.95 Aligned_cols=75 Identities=9% Similarity=-0.051 Sum_probs=0.0
Q ss_pred ccccccCCceEEeeeecccCCcceeeccccceeeccCcccccchh----hhhhcccccccccceeeeeccccceEEeech
Q psy9769 641 SLLNLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCN 716 (1026)
Q Consensus 641 ~~~~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k 716 (1026)
....++.|++++|+|.++.++|++|++ ..+..|++|.+++++.+ .+.|++|+++ +++|+.+|+ ++++.||+|
T Consensus 631 i~~~~~vG~v~~G~V~~I~~fGaFVel-~~g~eGLvHiSels~~rv~~~~d~~kvGD~V--~VkVi~iD~-~grI~LS~K 706 (726)
T 4aid_A 631 ITDEAEVGKIYDGKVVKVVDFGAFVNF-FGAKDGLVHVSQISNERVAKPSDVLKEGQMV--KVKLLGFDD-RGKTKLSMK 706 (726)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhhhcCCcEEEEEEEEEeccEEEEEE-CCCcEEEEEHHHcCcccccCccccCCCCCEE--EEEEEEECC-CCcEEEEEe
Confidence 345778999999999999999999999 47899999999999876 6689999999 999999999 789999999
Q ss_pred hhh
Q psy9769 717 EAL 719 (1026)
Q Consensus 717 ~~l 719 (1026)
+..
T Consensus 707 ~~~ 709 (726)
T 4aid_A 707 VVD 709 (726)
T ss_dssp ---
T ss_pred ecc
Confidence 853
No 116
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.04 E-value=0.00093 Score=65.51 Aligned_cols=92 Identities=12% Similarity=0.248 Sum_probs=73.8
Q ss_pred EEEEECCEEEEEEhhhhhccC-hhhHhhhc-C--Cc--cCcccEEEecCCCHHHHHHHhhheecceeeechhh-HHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACS-PYFHAMFI-S--FE--ESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEEN-VQMLLP 140 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S-~yF~~mf~-~--~~--e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~~-v~~ll~ 140 (1026)
|+|.|+|+.|...+..|.... .+|.+||. . +. .....++-+ |=++..|+.||+|+.+|.+.++.+- ...++.
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~e 92 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE 92 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHHHH
Confidence 788899999999999999765 37888987 3 11 112345666 5799999999999999999876553 367889
Q ss_pred HHHhcCchhHHhHHHHhhhc
Q psy9769 141 AANLLQLTDVRDACCDFLQC 160 (1026)
Q Consensus 141 ~A~~l~l~~L~~~c~~~l~~ 160 (1026)
-|.+|+|+.|.+.|.+.|..
T Consensus 93 EA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 93 EAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHHH
Confidence 99999999999999988764
No 117
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.88 E-value=0.028 Score=57.67 Aligned_cols=146 Identities=21% Similarity=0.149 Sum_probs=101.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
++.+|+..|..+ .+.+..+|+.+++-..--++|..-.+.+++..+++||+....++.+++||+.+.+- +..++.+.
T Consensus 30 ~~~LyestG~~g--~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~--~~ti~~~~ 105 (243)
T 3mbr_X 30 RGHLYESTGETG--RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP--RARFRYPG 105 (243)
T ss_dssp TTEEEEEECCTT--SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE--EEEEECSS
T ss_pred CCEEEEECCCCC--CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE--EEEEeCCC
Confidence 578999988643 36899999999987765566666677788889999999998889999999988654 33333344
Q ss_pred ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE-Ecc--CCCCCcce-eEEEEECCEEEEEe-CCCceeeEEcCc
Q psy9769 399 STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN-MIA--PMSTRRSS-VGVGVLNGCLYAEN-LDGRILGCVKEI 473 (1026)
Q Consensus 399 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r~~-~~~~~~~~~lyv~G-G~~~~~~~~~~~ 473 (1026)
.+.+++.-++++|+.-| .+.++.+||.+.+-. .+. ..+.+... -.+...+++||+-- ..+.+...|+.+
T Consensus 106 ~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 106 EGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp CCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTT
T ss_pred CceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCC
Confidence 55667766778998754 268999999987643 222 22333222 13445589999765 345566666655
Q ss_pred c
Q psy9769 474 T 474 (1026)
Q Consensus 474 ~ 474 (1026)
.
T Consensus 180 G 180 (243)
T 3mbr_X 180 G 180 (243)
T ss_dssp C
T ss_pred C
Confidence 3
No 118
>2c35_B Human RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transcription, nucleotidyltransferase; 2.70A {Homo sapiens} SCOP: b.40.4.5 d.230.1.1
Probab=96.77 E-value=0.00082 Score=65.69 Aligned_cols=67 Identities=13% Similarity=0.112 Sum_probs=55.5
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh----------------hhhhcccccccccceeeeeccccc
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----------------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----------------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
..|+.++|+|+++.++|++|++ +.+.||+|.+.++..+ ...+++|+++ ++||+.+|.+++
T Consensus 80 ~~Gev~~G~V~~v~~fG~fV~l--~~~~glvhis~l~~~~~~d~~~~~~~~~~~~~~~~~~~Gd~V--~vkV~~vd~~~~ 155 (172)
T 2c35_B 80 FKGEVVDAVVTQVNKVGLFTEI--GPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEI--RLKIVGTRVDKN 155 (172)
T ss_dssp CTTCEEEEEEEEEETTEEEEEE--TTEEEEEEGGGSCTTEEEESSSSSCEEEETTSCSEEETTCEE--EEEEEEEEEETT
T ss_pred CCCCEEEEEEEEEeCCEEEEEE--CCEEEEEEHHHCCCCcEECCCCCccEEEeCCCCEEECCCCEE--EEEEEEEEcCCC
Confidence 5899999999999999999999 5788999999887432 1258999999 999999998765
Q ss_pred ---eEEeechh
Q psy9769 710 ---HVYLSCNE 717 (1026)
Q Consensus 710 ---~v~lS~k~ 717 (1026)
++. |+++
T Consensus 156 ~~~~ig-sm~~ 165 (172)
T 2c35_B 156 DIFAIG-SLMD 165 (172)
T ss_dssp EEEEEE-ECCS
T ss_pred CcEEEE-EecC
Confidence 444 7766
No 119
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=96.75 E-value=0.00073 Score=66.20 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=58.1
Q ss_pred ccCCceEEeeeecccCCcceeecccc----------ceeeccCcccccchh----hhhhcccccccccceeeeeccccce
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLKNT----------QFKAFISPEAMSTAY----NAKYLTNKRVDLDCSVLYVCPRHFH 710 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~~~----------~~~gfi~~~~~~~~~----~~~~~~G~~~~~~~~Il~vd~~~~~ 710 (1026)
.+ |++|.|+|+++.++|++|++. . ++.|+|+.+++++.+ .+.|++|+.+ +|+|+. ++
T Consensus 56 p~-GdiV~G~V~~V~~~ga~V~I~-~v~~~~~~~~~~~~Gll~isei~~~~~~~~~~~~~~GD~V--~akVi~-----~~ 126 (179)
T 3m7n_A 56 VK-GDVVLGRVVDLRNSIALIEVS-SKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGYLDIL--KARVIG-----DN 126 (179)
T ss_dssp CT-TCEEEEEEEEECSSEEEEEEE-EETTCCSCCTTCEEEEEEGGGTTSSCCSSGGGTCCTTCEE--EEEEEE-----TT
T ss_pred CC-CCEEEEEEEEEeCCcEEEEEc-cccCcccccccCeeEEEEHHHcCcchhhCHhhcCCCCCEE--EEEEEC-----Ce
Confidence 36 999999999999999999995 4 799999999998865 5789999999 999997 78
Q ss_pred EEeechhh
Q psy9769 711 VYLSCNEA 718 (1026)
Q Consensus 711 v~lS~k~~ 718 (1026)
+.||.+..
T Consensus 127 i~LS~k~~ 134 (179)
T 3m7n_A 127 LRLSTKEE 134 (179)
T ss_dssp TEEECCST
T ss_pred EEEEEecC
Confidence 99999873
No 120
>3h0g_G DNA-directed RNA polymerase II subunit RPB7; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=96.75 E-value=0.00071 Score=65.93 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=56.0
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh--------------hhhhcccccccccceeeeeccccc--
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY--------------NAKYLTNKRVDLDCSVLYVCPRHF-- 709 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~--------------~~~~~~G~~~~~~~~Il~vd~~~~-- 709 (1026)
..|++++|+|+++.++|++|++ +.+.||+|.+.++..+ ...+++|+++ ++||+.+|+..+
T Consensus 83 ~~Gev~~G~V~~v~~fG~FV~l--~~~~glVh~s~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~V--rvkV~~vd~~~~~~ 158 (172)
T 3h0g_G 83 FRGEVVDAIVTTVNKMGFFANI--GPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQVIEKGSNV--RLKIVGTRTDATEI 158 (172)
T ss_dssp CTTCEEECCCCEEETTEEECCB--TTBCCEEEGGGSCTTCCCBSSSSSCBEESSSCEECSSCCE--EEEEEEEEESSSCE
T ss_pred CCCCEEEEEEEEEEcceEEEEe--CCeEEEEEHHHCCCccccCcccccceEecCCcEECCCCEE--EEEEEEEECCCCCc
Confidence 5799999999999999999999 6788999999887543 2468999999 999999998873
Q ss_pred -eEEeechh
Q psy9769 710 -HVYLSCNE 717 (1026)
Q Consensus 710 -~v~lS~k~ 717 (1026)
++. |+++
T Consensus 159 ~~Ig-tm~~ 166 (172)
T 3h0g_G 159 FAIA-TMKE 166 (172)
T ss_dssp EEEE-ECCS
T ss_pred eEEE-EcCC
Confidence 444 6655
No 121
>2asb_A Transcription elongation protein NUSA; protein-RNA complex, transcription/RNA complex; 1.50A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 PDB: 2atw_A
Probab=96.57 E-value=0.0027 Score=64.20 Aligned_cols=69 Identities=9% Similarity=0.217 Sum_probs=59.0
Q ss_pred ccCccccccccc----ccccceeeeeccc--ceeeeeeccc------cccCceEEEEEeeeeeccceeEEEEechHHHHh
Q psy9769 563 ETGLVLPACVHS----KEDHGYLLDVGVK--NTRAFIKYDS------VILGQIVTCMISKIKVAASMSILEVTLDEELIR 630 (1026)
Q Consensus 563 ~~G~~v~g~V~s----v~d~g~~v~~G~~--~~~gf~~~~~------~~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~~ 630 (1026)
+.|.+|+|+|.+ ++++.++|++|.. +.+|+||.++ |++|+.+++.|.+++...+...+.||...-.+.
T Consensus 6 r~GeIVtG~V~r~~~~v~~~~ViVdlG~~~~k~EgiLP~~Eqip~E~~~~GDrIkayV~~V~~~~~gpqIiLSRt~p~lv 85 (251)
T 2asb_A 6 REGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLV 85 (251)
T ss_dssp CTTCEEEEEEECCHHHHHTTCEEEEECSSSSCEEEEECGGGSCTTCCCCTTCEEEEEEEEEECCSSSCEEEEESSCHHHH
T ss_pred cCCCEEEEEEEEccccccCCeEEEEeCCCCcceEEEEcHHHcCCCccCCCCCEEEEEEEEEEcCCCCCEEEEEeccHHHH
Confidence 479999999999 8999999999852 5899999866 999999999999999887678899998765544
Q ss_pred h
Q psy9769 631 S 631 (1026)
Q Consensus 631 ~ 631 (1026)
+
T Consensus 86 k 86 (251)
T 2asb_A 86 R 86 (251)
T ss_dssp H
T ss_pred H
Confidence 3
No 122
>2b8k_G B16, DNA-directed RNA polymerase II 19 kDa polypeptide; DNA-dependent RNA polymerase, cellular RNA polymerase; 4.15A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.230.1.1
Probab=96.55 E-value=0.0012 Score=66.24 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=56.7
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh--------------hhhhcccccccccceeeeeccccc--
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY--------------NAKYLTNKRVDLDCSVLYVCPRHF-- 709 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~--------------~~~~~~G~~~~~~~~Il~vd~~~~-- 709 (1026)
..|++++|+|+++.++|++|+++ ...||+|.+.++..+ ++.+++|++| +++|+.+|.+.+
T Consensus 82 ~vGev~~G~V~~vt~fG~FVelg--~~dGlVhiS~l~d~~~~d~~~~~w~~~~~~~~~~~Gd~V--rVkV~~vd~~~~~i 157 (215)
T 2b8k_G 82 FKGEVVDGTVVSCSQHGFEVQVG--PMKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRI--RVKIEGCISQVSSI 157 (215)
T ss_dssp CTTEEEEEEEEEEETTEEEEECT--TSEEEEEGGGSCSSCCCBSSCSSCEEECSSCEEETTCEE--EEEEEEEEEETTEE
T ss_pred CCCCEEEEEEEEEecceEEEEec--CcEEEEEHHHCCccceeccccccceeeccccEECCCCEE--EEEEEEEEcCCCcc
Confidence 68999999999999999999994 399999999887532 1458999999 999999998874
Q ss_pred -eEEeechhh
Q psy9769 710 -HVYLSCNEA 718 (1026)
Q Consensus 710 -~v~lS~k~~ 718 (1026)
++. |+++.
T Consensus 158 ~~Ig-Smk~~ 166 (215)
T 2b8k_G 158 HAIG-SIKED 166 (215)
T ss_dssp EEEE-ECCST
T ss_pred EEEE-EcCCC
Confidence 555 77663
No 123
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.54 E-value=0.02 Score=58.79 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=85.2
Q ss_pred EEcCCCCccccc--eeeEEECCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCC
Q psy9769 347 QSVAEMPTRRCR--AGLVFLHEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGL 422 (1026)
Q Consensus 347 ~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 422 (1026)
+.+...|..... .++...++.+|+..|..+ .+.++|+.+++-..--++|..-.+.+++..+++||+....+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~----- 84 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN----- 84 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----
Confidence 333334444333 467788999999999864 78899999988655445665556677888899999986433
Q ss_pred CEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 423 NSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 423 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
+.+++||+.+-+- +...+.+..+.+++.-+++||+.-|.+.+..+|+.+
T Consensus 85 ~~v~v~D~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 85 HEGFVYDLATLTP--RARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp SEEEEEETTTTEE--EEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTT
T ss_pred CEEEEEECCcCcE--EEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCC
Confidence 7899999877554 333333445566666678999998877777777765
No 124
>1y14_B B16, RPB7, DNA-directed RNA polymerase II 19 kDa polypeptide; transferase; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.230.1.1 PDB: 1nt9_G 1wcm_G 1pqv_G 1y1v_G 1y1w_G 1y1y_G 1y77_G* 2b63_G* 2ja5_G* 2ja6_G* 2ja7_G* 2ja8_G* 2r7z_G 2r92_G 2r93_G 2vum_G* 3fki_G 3h3v_H 3hou_G* 3hov_G* ...
Probab=96.52 E-value=0.0015 Score=63.63 Aligned_cols=60 Identities=13% Similarity=0.211 Sum_probs=51.5
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh--------------hhhhcccccccccceeeeeccccc
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY--------------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~--------------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
..|+.++|+|+++.++|++|+++ ...||+|.+.++..+ ++.+++|+++ ++||+.+|.+.+
T Consensus 82 ~~Gev~~G~V~~v~~fG~FV~l~--~~dglvhis~l~~~~~~d~~~~~~~~~~~~~~~~~Gd~V--~vkV~~vd~~~~ 155 (171)
T 1y14_B 82 FKGEVVDGTVVSCSQHGFEVQVG--PMKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRI--RVKIEGCISQVS 155 (171)
T ss_dssp CTTCEEEEEEEEEETTEEEEEET--TEEEEEEGGGSCTTCEECC-----CEECSSCEECTTCEE--EEEEEEEEEETT
T ss_pred CCCCEEEEEEEEEecCEEEEEec--CeEEEEEHHHCCCCceECcccCceEEeccceEECCCCEE--EEEEEEEEcCCC
Confidence 58999999999999999999994 399999999886432 1458899999 999999998764
No 125
>2bh8_A 1B11; transcription, molecular evolution, unique architecture, transcription regulation, phosphorylation; 1.9A {Escherichia coli}
Probab=96.51 E-value=0.0056 Score=53.51 Aligned_cols=66 Identities=15% Similarity=-0.038 Sum_probs=50.9
Q ss_pred CCCcEEEEEEEEE---ecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeeech
Q psy9769 948 KPGRLVWGVLKEK---MPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLLTE 1016 (1026)
Q Consensus 948 ~~G~~v~G~V~~i---~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~~ 1016 (1026)
.+++.++|+|+.. +.|| ||.-.+ +.++|+|.++|++... +...+++||.|++.|.++++.-.++..
T Consensus 12 ~~~~~~~G~Vk~fn~~kGfG-FI~~~~gg~dvfvH~s~l~~~~~--~~~~l~~Ge~V~g~V~~i~~fG~fv~l 81 (101)
T 2bh8_A 12 LQSGKMTGIVKWFNADKGFG-FITPDDGSKDVFVHFSAGSSGAA--VRGNPQQGDRVEGKIKSITDFGIFIGL 81 (101)
T ss_dssp ----CEEEEEEEEEGGGTEE-EEEESSSSCEEEEECCCSCSSSC--CCCCCCTTCEEEEEEEECCSEEEEECT
T ss_pred cccccceeEEEEEECCCCCE-EEEeCCCCcEEEEEEEEEecCCc--cccCCCCCCEEEEEEEEeCCcEEEEEc
Confidence 4488899999987 7899 888765 6999999999987643 123468999999999999987777654
No 126
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.38 E-value=0.28 Score=53.21 Aligned_cols=137 Identities=12% Similarity=0.007 Sum_probs=90.2
Q ss_pred CcEEEEEECCCCcEEEcC-----CCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeE-EeCCCCcCCcceeEEEE-
Q psy9769 333 IRSVECYDFKTERWQSVA-----EMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEW-SSAPPMEARRSTLGVAV- 405 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~- 405 (1026)
-..+..||+.++++..-- ..+.......++..++++|+....++.+.++|+.+.+- ..++....| +.++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p---~~i~~~ 92 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSP---RYIHFL 92 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSE---EEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCC---cEEEEe
Confidence 568999999998886421 12233334556778999999988788999999998775 334333333 33444
Q ss_pred ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCC----cceeEEEEECCEEEEEe-C-CCceeeEEcCcccEE
Q psy9769 406 LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTR----RSSVGVGVLNGCLYAEN-L-DGRILGCVKEITDWG 477 (1026)
Q Consensus 406 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~lyv~G-G-~~~~~~~~~~~~~W~ 477 (1026)
.++++|+.... ...+.++|+.+++-...-+.+.. ....+++..++++|+.. | .+.+..+|..+.+..
T Consensus 93 ~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 93 SDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp ETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred CCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 68899998743 26899999998875422121110 02234445799999997 3 567777887776543
No 127
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.38 E-value=0.0046 Score=55.35 Aligned_cols=83 Identities=11% Similarity=0.150 Sum_probs=65.0
Q ss_pred EEEEECCEEEEEEhhhhhccCh-hhHhhhcC-C-ccCcccEEEecCCCHHHHHHHhhheecceeeechh-hHHHHHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACSP-YFHAMFIS-F-EESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEE-NVQMLLPAAN 143 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S~-yF~~mf~~-~-~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~-~v~~ll~~A~ 143 (1026)
|+|.|+|+.|...+..|..... .+.+|++. . ......++-+ +=++..|..||+|+.+|.+.++.+ ....++.-|.
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~ 85 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELE 85 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHH
Confidence 8889999999999999997643 45667762 1 2234456766 579999999999999999877654 4678899999
Q ss_pred hcCchhHH
Q psy9769 144 LLQLTDVR 151 (1026)
Q Consensus 144 ~l~l~~L~ 151 (1026)
+|++++..
T Consensus 86 fy~i~~~~ 93 (115)
T 3kvt_A 86 FWGLDSNQ 93 (115)
T ss_dssp HHTCCGGG
T ss_pred HhCCChHH
Confidence 99997754
No 128
>2nn6_G Exosome complex exonuclease RRP40; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=96.35 E-value=0.0072 Score=63.27 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=57.2
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC-eeeec
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG-ELLLT 1015 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~-~~~~~ 1015 (1026)
++|++|.|.|+++....+.|.+..-..|++|.+++.- ..++..+.|++||.|.|+|++++++ +..||
T Consensus 126 ~vGDiVIG~Vt~v~~~~~~VdI~s~~~a~L~~~~f~G-atk~~r~~f~~GDlV~ArV~s~~~~~~~eLs 193 (289)
T 2nn6_G 126 VKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEG-ATKRNRPNVQVGDLIYGQFVVANKDMEPEMV 193 (289)
T ss_dssp CSSEEEEEEEEEEETTEEEEECSSSSCCCEESCSSSC-CSSCSSSSSCTTCEEEEEEEECCTTSCCEEE
T ss_pred CCCCEEEEEEEEEeCcEEEEEECCCceeEEehhhcCc-chhhhhhhcCCCCEEEEEEEEcCCCCceEEE
Confidence 4499999999999999999999988899999998862 2345677899999999999999874 55665
No 129
>2je6_I RRP4, exosome complex RNA-binding protein 1; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: b.40.4.5 b.84.4.2 d.51.1.1 PDB: 2jea_I* 2jeb_I* 3l7z_C
Probab=96.34 E-value=0.0021 Score=66.40 Aligned_cols=70 Identities=13% Similarity=0.079 Sum_probs=60.8
Q ss_pred cccCCceEEeeeecccCCcceeeccccceeeccCcccccchh-------hhhhcccccccccceeeeeccccceEEeech
Q psy9769 644 NLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY-------NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCN 716 (1026)
Q Consensus 644 ~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~-------~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k 716 (1026)
...+|++|.|+|.++.++|++|++ ...+.|+|+.++++..+ .+.+++|+.+ .|+|+.+++. +++.||++
T Consensus 71 ~p~~GDiV~G~V~~v~~~ga~VdI-~~~~~GlL~isei~~~~~~~~~~~~~~l~vGD~V--~arVi~v~~~-~~i~LS~r 146 (251)
T 2je6_I 71 YPKINDIVIGLVEDVEIYGWVVDI-KAPYKAYLPASNLLGRSINVGEDLRRYLDVGDYV--IARIENFDRS-IDPVLSVK 146 (251)
T ss_dssp CCCTTCEEEEEEEEECSSEEEEEC-SSSSCEEEEHHHHHTSCCCTTCCCSSSCCTTCEE--EEEEEEEETT-EEEEEECC
T ss_pred CCCCCCEEEEEEEEEeCceEEEEc-CCCeEEEEEHHHhcCCccccccchhhcCCCCCEE--EEEEEEECCC-CcEEEEEc
Confidence 457899999999999999999999 35799999998887544 2479999999 9999999986 58999988
Q ss_pred h
Q psy9769 717 E 717 (1026)
Q Consensus 717 ~ 717 (1026)
+
T Consensus 147 ~ 147 (251)
T 2je6_I 147 G 147 (251)
T ss_dssp S
T ss_pred c
Confidence 6
No 130
>2ba0_A Archeal exosome RNA binding protein RRP4; RNAse PH, RNA degradation, exoribonuclease, S1domain, KH domain, archaeal; 2.70A {Archaeoglobus fulgidus} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=96.33 E-value=0.0031 Score=64.26 Aligned_cols=69 Identities=20% Similarity=0.318 Sum_probs=60.7
Q ss_pred ccCCceEEeeeecccCCcceeeccccceeeccCcccccch-h----hhhhcccccccccceeeeeccccceEEeechh
Q psy9769 645 LVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTA-Y----NAKYLTNKRVDLDCSVLYVCPRHFHVYLSCNE 717 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~-~----~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~k~ 717 (1026)
.++|++|.|+|+++.++|++|++ ...+.|+|+.++++.. + .+.+++|+.+ .|+|+.+++. .++.||+++
T Consensus 55 p~~GDiV~G~V~~v~~~~a~V~I-~~~~~g~l~isev~~~~~~~~~~~~l~~GD~V--~arVi~v~~~-~~i~LS~r~ 128 (229)
T 2ba0_A 55 PSVGDVVIGIIREVAANGWAVDI-YSPYQAFLPVSENPEMKPNKKPNEVLDIGDAI--IAKVLNIDPK-MKVTLTMKD 128 (229)
T ss_dssp CCTTCEEEEEEEEECSSEEEEEC-SSSSCEEEEGGGCTTCCTTSCGGGTCCTTCEE--EEEEEEECTT-CCEEEECCS
T ss_pred CCCCCEEEEEEEEEeCCeEEEEe-CCCeEEEEEHHHccccccccchhcccCCCCEE--EEEEEEECCC-CcEEEEEcc
Confidence 58999999999999999999999 3579999999988842 2 5789999999 9999999986 589999886
No 131
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.25 E-value=0.067 Score=55.33 Aligned_cols=147 Identities=13% Similarity=0.109 Sum_probs=97.3
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
++.+|+..|..+ .+.+..+|+.+.+-..--+++..-.+.+++..+++||+....++.+++||+.+.+-. ..++.+-
T Consensus 52 ~~~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~--~ti~~~~ 127 (262)
T 3nol_A 52 NGYFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV--RSFNYDG 127 (262)
T ss_dssp TTEEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE--EEEECSS
T ss_pred CCEEEEECCCCC--CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE--EEEECCC
Confidence 578999888542 357899999998866544555544556688899999999888899999999886642 2333333
Q ss_pred ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE-Ecc--CCCCCccee-EEEEECCEEEEEeC-CCceeeEEcCc
Q psy9769 399 STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN-MIA--PMSTRRSSV-GVGVLNGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 399 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r~~~-~~~~~~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
.+.+++.-++.+|+.-| .+.++.+||.+.+-. .++ ..+.+.... .+...+++||+--- .+.+...|+.+
T Consensus 128 eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 128 EGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp CCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTT
T ss_pred CceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCC
Confidence 55566655677888644 268999999987643 222 112222211 23345899997653 45566666665
Q ss_pred cc
Q psy9769 474 TD 475 (1026)
Q Consensus 474 ~~ 475 (1026)
.+
T Consensus 202 G~ 203 (262)
T 3nol_A 202 GK 203 (262)
T ss_dssp CB
T ss_pred Cc
Confidence 44
No 132
>1k0r_A NUSA; two component arrangement, S1 domain, two K-homology domains., structural genomics, PSI, protein structure initiative; 1.70A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1
Probab=96.19 E-value=0.0054 Score=65.80 Aligned_cols=67 Identities=10% Similarity=0.244 Sum_probs=57.7
Q ss_pred ccCccccccccc----ccccceeeeecc--cceeeeeeccc------cccCceEEEEEeeeeeccceeEEEEechHHHH
Q psy9769 563 ETGLVLPACVHS----KEDHGYLLDVGV--KNTRAFIKYDS------VILGQIVTCMISKIKVAASMSILEVTLDEELI 629 (1026)
Q Consensus 563 ~~G~~v~g~V~s----v~d~g~~v~~G~--~~~~gf~~~~~------~~~G~~v~~~v~~~~~~~~~~~i~ls~~~~~~ 629 (1026)
+.|.+|+|+|.+ +++++++|++|. .+++|++|.++ |++|+.++|.|.+++...+...+.||...-.+
T Consensus 129 r~GeIVtG~V~r~~~~v~~~~v~VdLG~~~~k~EgiLP~~EqiP~E~~~~GDrVkvyV~~V~~~~kgpqI~LSRT~p~l 207 (366)
T 1k0r_A 129 REGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNL 207 (366)
T ss_dssp CTTCEEEEEEECCHHHHHTTCEEEEECCSSSCEEEEECGGGSCTTCCCCTTCEEEEEEEEEECCSSSCEEEEESSCHHH
T ss_pred cCCCEEEEEEEEccccccCCeEEEEeCCCccceEEEEcHHHcCCCccCCCCCEEEEEEEEEecCCCccEEEEEeCChHH
Confidence 489999999999 999999999984 25899999866 99999999999999988767788888765433
No 133
>2z0s_A Probable exosome complex RNA-binding protein 1; alpha/beta protein, cytoplasm, structural genomics, NPPSFA; 3.20A {Aeropyrum pernix} SCOP: b.40.4.5 d.51.1.1
Probab=96.16 E-value=0.0031 Score=64.72 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=60.7
Q ss_pred cccCCceEEeeeecccCCcceeeccccceeeccCcccccchh--------hhhhcccccccccceeeeeccccceEEeec
Q psy9769 644 NLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY--------NAKYLTNKRVDLDCSVLYVCPRHFHVYLSC 715 (1026)
Q Consensus 644 ~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~--------~~~~~~G~~~~~~~~Il~vd~~~~~v~lS~ 715 (1026)
..++|++|.|+|.++.++|++|++ ...+.|+++.++++... .+.+++|+.+ .|+|+.+++.. ++.||+
T Consensus 63 ~p~~GDiV~G~V~~v~~~~~~V~I-~~~~~g~l~isei~~~~~~~~~~~~~~~l~~GD~V--~a~Vi~v~~~~-~i~LS~ 138 (235)
T 2z0s_A 63 VPQAGDVVIGLIQSVGIMNWFVDI-NSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYI--KAKVVAFDKTR-SPLLTV 138 (235)
T ss_dssp CCCTTCCEEEEEEEECSSEEEEEC-SSSSCEEEEHHHHHTSCCCTTTTCCTTSSCTTCEE--EEEEEEECTTS-CEEEEC
T ss_pred CCCCCCEEEEEEEEEeCCeEEEEe-CCCeEEEEEHHHhCCCccccchhhHhhcCCCCCEE--EEEEEEECCCC-cEEEEE
Confidence 568999999999999999999999 35799999988887521 4579999999 99999999764 899998
Q ss_pred hh
Q psy9769 716 NE 717 (1026)
Q Consensus 716 k~ 717 (1026)
++
T Consensus 139 k~ 140 (235)
T 2z0s_A 139 QG 140 (235)
T ss_dssp CS
T ss_pred ec
Confidence 86
No 134
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.11 E-value=0.052 Score=56.19 Aligned_cols=142 Identities=11% Similarity=0.067 Sum_probs=93.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
++.+|+..|..+ .+..+|+.+.+-..-- ++..-.+.+++..+++||+....++.+++||+.+.+-. ..++.+.
T Consensus 64 ~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~--~ti~~~~ 136 (268)
T 3nok_A 64 QGHFFESTGHQG----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE--RTTRYSG 136 (268)
T ss_dssp TTEEEEEETTTT----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE--EEEECSS
T ss_pred CCEEEEEcCCCC----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE--EEEeCCC
Confidence 678999998653 3889999987644322 55444556688889999999888899999999887643 2233333
Q ss_pred ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEE-cc--CCCCCcce-eEEEEECCEEEEEeC-CCceeeEEcCc
Q psy9769 399 STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM-IA--PMSTRRSS-VGVGVLNGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 399 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~~-~~~~~~~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
.+.+++.-++++|+.-| .+.++.+||++.+-.. +. .-+.+... -.+...+++||+--- .+.+...|+.+
T Consensus 137 eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 137 EGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp CCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTT
T ss_pred ceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCC
Confidence 45667777889999855 2689999999876432 22 22222211 123345889997542 44555666654
No 135
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.09 E-value=0.039 Score=57.06 Aligned_cols=121 Identities=15% Similarity=0.110 Sum_probs=81.7
Q ss_pred EEEcCCCCccccc--eeeEEECCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCC
Q psy9769 346 WQSVAEMPTRRCR--AGLVFLHEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSG 421 (1026)
Q Consensus 346 W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 421 (1026)
++.+...|..+.. .++...++.+|+..|..+ .+.++|+.+.+-..--+++..-.+.+.+..+++||+....+
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~---- 106 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN---- 106 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS----
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC----
Confidence 3344444443333 455666899999999865 78899999987654334554444566788899999995433
Q ss_pred CCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 422 LNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 422 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
+.+++||+.+.+-. ...+.+-.+.+.+.-+++||+.-|.+.+..+|+.+
T Consensus 107 -~~v~v~D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T 155 (262)
T 3nol_A 107 -GLGFVWNIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPES 155 (262)
T ss_dssp -SEEEEEETTTCCEE--EEEECSSCCCCEEECSSCEEECCSSSEEEEECTTT
T ss_pred -CEEEEEECccCcEE--EEEECCCCceEEecCCCEEEEECCCCeEEEEcCCC
Confidence 78999999876643 22233334455555577899998877777777765
No 136
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.87 E-value=0.25 Score=54.61 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=93.9
Q ss_pred CCccCCcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCC-------ccccceeeEEECCEEEEEeccCCCeEEEeCC
Q psy9769 314 QPLRVPKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMP-------TRRCRAGLVFLHEKVYAVGGFNGSLRVYDPS 384 (1026)
Q Consensus 314 ~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p-------~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~ 384 (1026)
.++..++.+|+.... ..+++||+.+. .|+.-.+.. ......+.++.++.+|+. ..++.++.||+.
T Consensus 48 ~p~v~~~~v~~~~~~-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~~g~l~a~d~~ 121 (376)
T 3q7m_A 48 HPALADNVVYAADRA-----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIG-SEKAQVYALNTS 121 (376)
T ss_dssp CCEEETTEEEEECTT-----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEE-ETTSEEEEEETT
T ss_pred ccEEECCEEEEEcCC-----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEE-cCCCEEEEEECC
Confidence 344467888887542 37999999765 476533211 122334456678899874 456789999998
Q ss_pred CCe--EEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEccCCCC--CcceeEEEEECCEEE
Q psy9769 385 TNE--WSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIAPMST--RRSSVGVGVLNGCLY 458 (1026)
Q Consensus 385 ~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~ly 458 (1026)
+.+ |+.-.+-. ...+.+..++.+|+..+ ...+..||+.+++ |+.-...+. .+...+.+..++.+|
T Consensus 122 tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~ 192 (376)
T 3q7m_A 122 DGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAV 192 (376)
T ss_dssp TCCEEEEEECSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEE
T ss_pred CCCEEEEEeCCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEE
Confidence 765 86532211 11223456888887543 1479999998776 876543221 122234455688888
Q ss_pred EEeCCCceeeEEcCcc--cEEEeecCC
Q psy9769 459 AENLDGRILGCVKEIT--DWGLIIELP 483 (1026)
Q Consensus 459 v~GG~~~~~~~~~~~~--~W~~~~~lP 483 (1026)
+-...+.+..++..+. .|+.-...|
T Consensus 193 ~g~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 193 VGGDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp ECCTTTEEEEEETTTCCEEEEEECCC-
T ss_pred EEcCCCEEEEEECCCCcEEEEEecccC
Confidence 8655667788887653 387665443
No 137
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.78 E-value=0.02 Score=51.94 Aligned_cols=83 Identities=10% Similarity=0.196 Sum_probs=62.8
Q ss_pred EEEEECCEEEEEEhhhhhccChhhHhhhcC-----CccCcccEEEecCCCHHHHHHHhhheecceeeechh-hHHHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACSPYFHAMFIS-----FEESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEE-NVQMLLPA 141 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~-----~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~-~v~~ll~~ 141 (1026)
|+|.|+|+.|..-+..|..... .||.. .......++-+ +=++..|+.||+|+.+|.+.++.+ .+..++.-
T Consensus 15 V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~E 90 (124)
T 1s1g_A 15 IVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDE 90 (124)
T ss_dssp EEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 8889999999999999986532 23431 11223456666 569999999999999999887654 46889999
Q ss_pred HHhcCchhHH-hHH
Q psy9769 142 ANLLQLTDVR-DAC 154 (1026)
Q Consensus 142 A~~l~l~~L~-~~c 154 (1026)
|++|+|+.+. +.|
T Consensus 91 a~fy~i~~l~l~~c 104 (124)
T 1s1g_A 91 LAFYGILPEIIGDC 104 (124)
T ss_dssp HHHTTCCGGGBCHH
T ss_pred HHHcCCChHHHHHH
Confidence 9999998874 444
No 138
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.72 E-value=0.043 Score=56.81 Aligned_cols=107 Identities=14% Similarity=0.084 Sum_probs=77.3
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEc
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
.++...++.+|+..|..+.+.++|+.+.+=..-- ++..-.+.+.+..+++||+....+ +.+++||+.+.+-.
T Consensus 58 qGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~Tl~~~-- 129 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMPPQRE-- 129 (268)
T ss_dssp EEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTTTEEE--
T ss_pred ceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCcCcEE--
Confidence 4566778999999999988999999998743322 444334556777899999985433 78999999876543
Q ss_pred cCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 439 APMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 439 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
...+.+..+.+++.-+++||+.-|.+.+..+|+.+
T Consensus 130 ~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 130 RTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp EEEECSSCCCCEEEETTEEEEECSSSEEEEECTTT
T ss_pred EEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCC
Confidence 22222334556666788999999887777777765
No 139
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.51 E-value=0.56 Score=51.72 Aligned_cols=146 Identities=14% Similarity=0.207 Sum_probs=90.5
Q ss_pred cCCcEEEEEcCCCCCCCcEEEEEECCCCc--EEEcCCCCc--cccceeeEEECCEEEEEeccCCCeEEEeCCCCe--EEe
Q psy9769 317 RVPKVMLVVGGQAPKAIRSVECYDFKTER--WQSVAEMPT--RRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNE--WSS 390 (1026)
Q Consensus 317 ~~~~~i~v~GG~~~~~~~~~~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~ 390 (1026)
..++.+|+..+ ...+++||+.+.+ |+.-.+.+. .+...+.+..++.+|+ |..++.+..||+.+.+ |+.
T Consensus 141 ~~~~~v~v~~~-----~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 141 VSDGLVLIHTS-----NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp EETTEEEEECT-----TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEE
T ss_pred EECCEEEEEcC-----CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEE
Confidence 34666776543 2479999998765 876433221 1233445566888776 5566789999998764 875
Q ss_pred CCCCcCCc--------ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEccCCCCCcceeEEEEECCEEEEE
Q psy9769 391 APPMEARR--------STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIAPMSTRRSSVGVGVLNGCLYAE 460 (1026)
Q Consensus 391 ~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~ 460 (1026)
-...|... .....+..++.+|+.+. + ..+.+||+.+++ |+.-.. ...+.+..++.+|+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~ 283 (376)
T 3q7m_A 215 RISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLV 283 (376)
T ss_dssp ECCC-----------CCCCCCEEETTEEEEECT-T-----SCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEE
T ss_pred ecccCCCCcccccccccCCCcEEECCEEEEEec-C-----cEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEE
Confidence 43322211 12233456888888642 1 468899998774 875321 123456679999999
Q ss_pred eCCCceeeEEcCccc--EEEe
Q psy9769 461 NLDGRILGCVKEITD--WGLI 479 (1026)
Q Consensus 461 GG~~~~~~~~~~~~~--W~~~ 479 (1026)
...+.+..+|..+.+ |..-
T Consensus 284 ~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 284 DQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp ETTCCEEEEETTTCCEEEEEC
T ss_pred cCCCeEEEEECCCCcEEEeec
Confidence 888888888876643 7653
No 140
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.48 E-value=0.33 Score=52.63 Aligned_cols=148 Identities=13% Similarity=-0.031 Sum_probs=88.3
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCcc----ccceeeEEECCEEEEEec-cCCCeEEEeCCCCeEEe-C
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTR----RCRAGLVFLHEKVYAVGG-FNGSLRVYDPSTNEWSS-A 391 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG-~~~~~~~yd~~~~~W~~-~ 391 (1026)
.++.+|+.... ...+.++|+.+.+-...-+.+.. ..-..++..++++|+..- .++.+.++|+.+++... +
T Consensus 93 ~~g~lyv~~~~----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 93 SDEKAYVTQIW----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp ETTEEEEEEBS----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECC----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 35688888642 35899999998875421111110 022345557899999974 57789999999987643 2
Q ss_pred CCCcCCcceeEEEE-ECCEEEEEeccCCCCC-----CCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCC
Q psy9769 392 PPMEARRSTLGVAV-LNSLIYAVGGFDGSSG-----LNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLD 463 (1026)
Q Consensus 392 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 463 (1026)
+....| +.++. -+|++|+....+.... .+.+.++|+.+++....-.++......+++.. ++.+|+..+
T Consensus 169 ~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 169 TIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp ECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EcCCCc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 211122 12222 3689888753221111 36899999999887643344433333344444 568888866
Q ss_pred CceeeEEcCcc
Q psy9769 464 GRILGCVKEIT 474 (1026)
Q Consensus 464 ~~~~~~~~~~~ 474 (1026)
.+..+|..+.
T Consensus 245 -~v~~~d~~t~ 254 (328)
T 3dsm_A 245 -DIWRMPVEAD 254 (328)
T ss_dssp -SEEEEETTCS
T ss_pred -EEEEEECCCC
Confidence 5666666543
No 141
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=95.40 E-value=0.025 Score=52.39 Aligned_cols=80 Identities=9% Similarity=0.150 Sum_probs=61.8
Q ss_pred cEEEEECCEEEEEEhhhhhccChhhHhhhcC-----CccCcccEEEecCCCHHHHHHHhhheecceeeechh-hHHHHHH
Q psy9769 67 DVKLIADGVEVAAHKMVLAACSPYFHAMFIS-----FEESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEE-NVQMLLP 140 (1026)
Q Consensus 67 Dv~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~-----~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~-~v~~ll~ 140 (1026)
=|+|.|+|+.|...+..|..... .||.. .......++-+ +=++..|+.||+|+.+|.+.++.+ .+..++.
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 38889999999999999986532 34431 11223456666 569999999999999999887654 4788899
Q ss_pred HHHhcCchhH
Q psy9769 141 AANLLQLTDV 150 (1026)
Q Consensus 141 ~A~~l~l~~L 150 (1026)
-|++|+|+.+
T Consensus 112 Ea~fy~i~~l 121 (140)
T 2nz0_B 112 ELAFYGILPE 121 (140)
T ss_dssp HHHHHTCCGG
T ss_pred HHHHcCCChH
Confidence 9999999887
No 142
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.34 E-value=0.66 Score=48.31 Aligned_cols=144 Identities=19% Similarity=0.180 Sum_probs=92.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC-c
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR-R 398 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~-r 398 (1026)
+.+|+..|.. ..+.+..+|+.+++=..--+++......+++..++.+|+..-.++.+++||+.+.+= +..+|.+ .
T Consensus 32 g~Lyvstg~~--~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v--~~~i~~g~~ 107 (266)
T 2iwa_A 32 DTLFESTGLY--GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN--IKNFTHQMK 107 (266)
T ss_dssp TEEEEEECST--TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE--EEEEECCSS
T ss_pred CeEEEECCCC--CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE--EEEEECCCC
Confidence 6899987742 236899999999886544334444455667788999999988888999999987653 2222222 2
Q ss_pred ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE-Ecc--CCCCCcc-eeEEEEECCEEEEEeC-CCceeeEEcCc
Q psy9769 399 STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN-MIA--PMSTRRS-SVGVGVLNGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 399 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r~-~~~~~~~~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
.+.+.+.-++++|+.-| .+.+..+|+.+.+-. .++ ..+.|.. .-.+...++++|+--. .+.+...|..+
T Consensus 108 ~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 108 DGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp SCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTT
T ss_pred CeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCC
Confidence 23444444667998643 378999999886643 222 2222221 1133344899998764 45666666654
No 143
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.23 E-value=0.017 Score=50.75 Aligned_cols=79 Identities=10% Similarity=0.210 Sum_probs=60.7
Q ss_pred EEEEECCEEEEEEhhhhhccChhhHhhhcC-----CccCcccEEEecCCCHHHHHHHhhheecceeeechh-hHHHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACSPYFHAMFIS-----FEESKQERIVLKGVDPNALKLLIDYVYSCEIYVTEE-NVQMLLPA 141 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S~yF~~mf~~-----~~e~~~~~i~l~~~~~~~f~~~l~~~Ytg~~~i~~~-~v~~ll~~ 141 (1026)
|+|.|+|+.|...+..|..... .||.. .......++-+ +=++..|+.||+|+.+|.+.++.+ .+..++.-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 7889999999999999986543 23331 11223456666 469999999999999999877654 46789999
Q ss_pred HHhcCchhH
Q psy9769 142 ANLLQLTDV 150 (1026)
Q Consensus 142 A~~l~l~~L 150 (1026)
|++|+++.+
T Consensus 78 a~fy~i~~l 86 (105)
T 1nn7_A 78 LAFFGLIPE 86 (105)
T ss_dssp HHHHTCCSC
T ss_pred HHHcCCCHH
Confidence 999999886
No 144
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=95.20 E-value=0.029 Score=48.72 Aligned_cols=83 Identities=6% Similarity=0.109 Sum_probs=61.7
Q ss_pred EEEEECCEEEEEEhhhhhccCh-hhHhhhc--CCccCcccEEEecCCCHHHHHHHhhheec-ceeeechh-hHHHHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACSP-YFHAMFI--SFEESKQERIVLKGVDPNALKLLIDYVYS-CEIYVTEE-NVQMLLPAA 142 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S~-yF~~mf~--~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt-g~~~i~~~-~v~~ll~~A 142 (1026)
|+|.|+|+.|...+..|...-. .+.+|+. ........++-+ +=++..|+.||+|+.+ |.+.++.+ .+..++.-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 7889999999999999976522 3344443 111224456776 5699999999999998 89877654 457788999
Q ss_pred HhcCchhHH
Q psy9769 143 NLLQLTDVR 151 (1026)
Q Consensus 143 ~~l~l~~L~ 151 (1026)
++|+++++.
T Consensus 82 ~fy~i~~~~ 90 (100)
T 1t1d_A 82 KFYELGENA 90 (100)
T ss_dssp HHTTCCHHH
T ss_pred HHcCCCHHH
Confidence 999997754
No 145
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.05 E-value=0.19 Score=52.37 Aligned_cols=120 Identities=19% Similarity=0.276 Sum_probs=76.5
Q ss_pred EEcCCCCcccc--ceeeEEEC-CEEEEEecc--CCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCC
Q psy9769 347 QSVAEMPTRRC--RAGLVFLH-EKVYAVGGF--NGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSG 421 (1026)
Q Consensus 347 ~~~~~~p~~r~--~~~~~~~~-~~iyv~GG~--~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 421 (1026)
+.+...|.+.. -+++++.+ +.+|+..|. .+.+.++|+.+++=...-+++......+.+..+++||+..-.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~----- 84 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL----- 84 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----
Confidence 34444444332 25666666 899999885 467999999998754433344333445677778999998542
Q ss_pred CCEEEEEECCCCcEEEccCCCCC-cceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 422 LNSAEVYDPSTEKWNMIAPMSTR-RSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 422 ~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
.+.+.+||+.+.+= +...|.+ ..+.+.+.-++++|+..|.+.+..+|+.+
T Consensus 85 ~~~v~viD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 85 KNIGFIYDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp CSEEEEEETTTTEE--EEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred CCEEEEEECCCCcE--EEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 37899999986543 2322222 22334444467899998877777777655
No 146
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.26 E-value=0.42 Score=52.86 Aligned_cols=141 Identities=16% Similarity=0.243 Sum_probs=80.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+|+.|+.+ ..+..||..+++....-+... .-.+++.. + ..+|+.|+.++.+.+||+.+++....-+.+.
T Consensus 2 ~~l~vs~~~d----~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 2 TFAYIANSES----DNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEEEETTT----TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred CEEEEEcCCC----CEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence 4677777654 478999998876543222111 12233332 3 4688888889999999998887543322222
Q ss_pred cceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCC-CceeeEEcC
Q psy9769 398 RSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLD-GRILGCVKE 472 (1026)
Q Consensus 398 r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~-~~~~~~~~~ 472 (1026)
.-.+++.. ++ .||+.|..+ ..+.+||+.+++....-... ....+++.. +..+|+.++. +.+..++..
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred -CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 22233332 34 566665432 57999999988764432222 222333333 3468777764 455555555
Q ss_pred ccc
Q psy9769 473 ITD 475 (1026)
Q Consensus 473 ~~~ 475 (1026)
+.+
T Consensus 147 ~~~ 149 (391)
T 1l0q_A 147 TKA 149 (391)
T ss_dssp TTE
T ss_pred CCc
Confidence 444
No 147
>2id0_A Exoribonuclease 2; RNAse, exonuclease, hydrolyase, mRNA decay, RNR family, hydrolase; 2.35A {Escherichia coli} SCOP: b.40.4.5 b.40.4.5 b.40.4.5 b.40.4.16 PDB: 2ix0_A* 2ix1_A
Probab=93.66 E-value=0.041 Score=65.33 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=59.0
Q ss_pred cCCc--eEEeeeecccCCcceeeccccceeeccCcccccc--hh--------------hhhhcccccccccceeeeeccc
Q psy9769 646 VPGM--KVIANICQQLPHGWKAKLKNTQFKAFISPEAMST--AY--------------NAKYLTNKRVDLDCSVLYVCPR 707 (1026)
Q Consensus 646 ~~G~--~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~--~~--------------~~~~~~G~~~~~~~~Il~vd~~ 707 (1026)
..|. ..+|+|.++.++|++|.+...|+.||++.+.++. .+ ...|++|++| +++|+.+|+.
T Consensus 557 ~vGe~~~f~g~V~~V~~~G~fV~L~~~gieGlVhis~l~~~~d~~~~d~~~~~l~~~~~~~~~lGD~V--~VkV~~vd~~ 634 (644)
T 2id0_A 557 KAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDELVCSQENGTVQIKGETVYKVTDVI--DVTIAEVRME 634 (644)
T ss_dssp GTTSCCCEEEEEEEEETTEEEEEETTTCCEEEEEGGGTCSCGGGEEEETTTTEEEETTEEEEETTCEE--EEEEEEEETT
T ss_pred ccCCCceEEEEEEEEeCCceEEEEcCCcEEEEEEchhccCcCceeEEcccccEEEecCCCEeCCCCEE--EEEEEEEeCC
Confidence 5788 9999999999999999995468999999988862 11 2458999999 9999999999
Q ss_pred cceEEeech
Q psy9769 708 HFHVYLSCN 716 (1026)
Q Consensus 708 ~~~v~lS~k 716 (1026)
++++.+++-
T Consensus 635 ~~~I~~~l~ 643 (644)
T 2id0_A 635 TRSIIARPV 643 (644)
T ss_dssp TTEEEEEEC
T ss_pred CCEEEEEEc
Confidence 999999863
No 148
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.36 E-value=0.81 Score=50.46 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=79.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+|+.|..+ ..+.+||+.+++........ ..-.+++.. +..+|+.++.++.+.+||+.+.+....-...
T Consensus 85 g~~l~~~~~~~----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 157 (391)
T 1l0q_A 85 GKQVYVTNMAS----STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (391)
T ss_dssp SSEEEEEETTT----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred CCEEEEEECCC----CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-
Confidence 34566666432 47999999987654432221 122333333 3478888888899999999988764432211
Q ss_pred CcceeEEEEE-C-CEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEe---CCCceeeE
Q psy9769 397 RRSTLGVAVL-N-SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAEN---LDGRILGC 469 (1026)
Q Consensus 397 ~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~G---G~~~~~~~ 469 (1026)
..-..++.. + ..+|+.++.+ ..+..||+.+++........ ....+++.. +..+|+.+ +.+.+..+
T Consensus 158 -~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 158 -RSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred -CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 111233332 3 4677776543 57999999887654333221 122222222 34667666 45566666
Q ss_pred EcCcc
Q psy9769 470 VKEIT 474 (1026)
Q Consensus 470 ~~~~~ 474 (1026)
+..+.
T Consensus 230 d~~~~ 234 (391)
T 1l0q_A 230 DTGTN 234 (391)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 65543
No 149
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.26 E-value=0.83 Score=49.78 Aligned_cols=105 Identities=10% Similarity=0.188 Sum_probs=65.7
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--C--CEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--H--EKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.|+.+ ..+..||....++..+..+.........+.+ + +.+++.|+.++.+.+||..+++|..+..+.
T Consensus 23 ~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 98 (379)
T 3jrp_A 23 GKRLATCSSD----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA 98 (379)
T ss_dssp SSEEEEEETT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEECC----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec
Confidence 3455666544 3577888776677665544332222223333 2 678888999999999999999887655443
Q ss_pred CCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 396 ARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 396 ~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
.......++.+ + +.+++.|+.+ ..+..||..+.
T Consensus 99 ~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~ 135 (379)
T 3jrp_A 99 VHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 135 (379)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTT
T ss_pred CCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCC
Confidence 22222333333 3 6677777765 46888998766
No 150
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.11 E-value=2.9 Score=46.55 Aligned_cols=135 Identities=12% Similarity=0.068 Sum_probs=80.7
Q ss_pred EEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc---CCcceeEEEEE--CC
Q psy9769 335 SVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME---ARRSTLGVAVL--NS 408 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~--~~ 408 (1026)
.++.+|+.+.++..+..++.+..-.+++.. ++.+|+.|+.++.+.+||+.+.+.....+.+ .......++.+ ++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~ 181 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN 181 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC
Confidence 688888877777666544433322233333 6899999888889999999988766533321 12222223333 78
Q ss_pred EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeC-CCceeeEEcCccc
Q psy9769 409 LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENL-DGRILGCVKEITD 475 (1026)
Q Consensus 409 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG-~~~~~~~~~~~~~ 475 (1026)
.+|+.|+.+ ..+..||+.+.+....-.. ....-.+++.. ++.+|+.++ .+.+..++..+.+
T Consensus 182 ~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 182 ELWVSQMQA-----NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EEEEEEGGG-----TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEECCC-----CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 898888754 5789999987654322111 11122233333 457888875 4556666655543
No 151
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.72 E-value=2.5 Score=44.09 Aligned_cols=140 Identities=6% Similarity=-0.016 Sum_probs=79.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+|+... ....+++||+ +.++.... .+..... .+++.- +|.+|+.....+.+.+||+ ++++.... .+.
T Consensus 151 ~g~l~v~~~----~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~ 222 (299)
T 2z2n_A 151 DNALWFTEN----QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK-IPT 222 (299)
T ss_dssp TSCEEEEET----TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSS
T ss_pred CCCEEEEeC----CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-CCC
Confidence 456777542 1247899999 77776542 1221112 233333 4789988766778999999 77776542 221
Q ss_pred Ccce-eEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCC-CcceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 397 RRST-LGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMST-RRSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 397 ~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
.... .+++.. +|.||+.... .+.+.+||+ +++..... .+. ...-.+++.-++.||+....+.+..+++.+
T Consensus 223 ~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~-~~~~~~~~~~i~~~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 223 PNARPHAITAGAGIDLWFTEWG-----ANKIGRLTS-NNIIEEYP-IQIKSAEPHGICFDGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp TTCCEEEEEECSTTCEEEEETT-----TTEEEEEET-TTEEEEEE-CSSSSCCEEEEEECSSCEEEEETTTEEEEEEEC-
T ss_pred CCCCceeEEECCCCCEEEeccC-----CceEEEECC-CCceEEEe-CCCCCCccceEEecCCCEEEEecCCcEEEEEcCc
Confidence 1122 233332 6788887522 257999999 45554442 121 112233333567899887666666666543
No 152
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.67 E-value=1.9 Score=45.89 Aligned_cols=141 Identities=16% Similarity=0.184 Sum_probs=76.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccce-eeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRA-GLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+..++.|+.+ ..+..||..+.++.....+....... +++.. ++..++.|+.++.+.+||..+.+....-.....
T Consensus 109 ~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~ 184 (337)
T 1gxr_A 109 GCTLIVGGEA----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 184 (337)
T ss_dssp SSEEEEEESS----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCEEEEEcCC----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC
Confidence 4455555543 47889999888754443332222222 22222 567778888999999999988765332111111
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeC-CCceeeEEcCc
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
......+ ++..++.|+.+ ..+..||+.+.+-...-..+.+ -.+++.. +++.+++|+ .+.+..++...
T Consensus 185 --~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 185 --GASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp --CEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred --ceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 1222223 66677777754 5789999987764333222222 1222222 455555555 44555555544
No 153
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.55 E-value=5.7 Score=41.26 Aligned_cols=140 Identities=11% Similarity=0.173 Sum_probs=75.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++.+|+.... ...+.+||+.......+........-.+++.- +|.+|+.+..++.+.+||+.......+..-...
T Consensus 131 ~g~l~v~~~~----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~ 206 (286)
T 1q7f_A 131 KGRIIVVECK----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGIT 206 (286)
T ss_dssp TSCEEEEETT----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTS
T ss_pred CCCEEEEECC----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCcc
Confidence 4567877542 24788999876554444221111111223332 479999887788999999876544444321101
Q ss_pred cceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC-CCCCcceeEEEEE-CCEEEEEeCCCcee
Q psy9769 398 RSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP-MSTRRSSVGVGVL-NGCLYAENLDGRIL 467 (1026)
Q Consensus 398 r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~ 467 (1026)
..-.+++. -+|.||+....++ ..+.+||+....-..+.. .+.. ...+++.. ++++|+....+.+.
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~~~~~-~~~~i~~~~~g~l~vs~~~~~v~ 274 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESKVKHA-QCFDVALMDDGSVVLASKDYRLY 274 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEESSCCS-CEEEEEEETTTEEEEEETTTEEE
T ss_pred CCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEcccCCCC-cceeEEECCCCcEEEECCCCeEE
Confidence 11123333 2678998865331 279999986554333332 1111 12233333 78999986544443
No 154
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.50 E-value=7.5 Score=40.27 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=78.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++.+|+.+.. ....+.+||+.......+..... ..-.++++ -+|.+|+....++.+.+||+..............
T Consensus 88 ~g~l~v~~~~---~~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 88 SGDIIVTERS---PTHQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHL 163 (286)
T ss_dssp TTEEEEEECG---GGCEEEEECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTC
T ss_pred CCeEEEEcCC---CCCEEEEECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCcc
Confidence 5678887632 12468889965544333322111 11123333 2578999887778899999876554443211111
Q ss_pred cceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCCC--ceeeEEcC
Q psy9769 398 RSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDG--RILGCVKE 472 (1026)
Q Consensus 398 r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~ 472 (1026)
..-.+++.. +|.+|+.+..+ ..+.+||+.......+..-.......+++.- ++++|+....+ .+..|+..
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNRA-----HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGGG-----TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCcEEEEECCCCCEEEEECCC-----CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 111223332 68899876532 5799999866544444321111112233332 67899987543 56666543
No 155
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.95 E-value=1.4 Score=45.42 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=75.1
Q ss_pred CcEEEE-EcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLV-VGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v-~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+|+ .... ...+.+||+.+........... ..-++++.. +|.+|+... ++.+.+||+.+...........
T Consensus 34 ~g~l~v~~~~~----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~ 107 (270)
T 1rwi_B 34 AGNVYVTSEGM----YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL 107 (270)
T ss_dssp TCCEEEEECSS----SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC
T ss_pred CCCEEEEccCC----CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc
Confidence 456888 5332 2478889987766554432111 112334433 578999877 7789999998776544432111
Q ss_pred CcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeC-CCceeeEEcCc
Q psy9769 397 RRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 397 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
..-.+++.. +|++|+....+ ..+.+||+.+.......... .....+++.. ++++|+... .+.+..++...
T Consensus 108 -~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 108 -NYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp -SSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred -CCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 112333333 67899875432 57888987766554332111 1111233333 578998864 34555555443
No 156
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.88 E-value=3.4 Score=43.00 Aligned_cols=139 Identities=6% Similarity=-0.045 Sum_probs=78.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++.+|+.... ...+.+||+ +.+............-.+++.- +|.+|+.....+.+++||+ +.++.... .+..
T Consensus 109 ~g~l~v~~~~----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~ 181 (299)
T 2z2n_A 109 NGDIWFTEMN----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFK-IPTP 181 (299)
T ss_dssp TSCEEEEETT----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEE-CSST
T ss_pred CCCEEEEecC----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEee-CCCC
Confidence 4567776532 247889998 6666544211111222333333 5789987655678999999 77766531 1111
Q ss_pred cc-eeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEe-CCCceeeEEc
Q psy9769 398 RS-TLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAEN-LDGRILGCVK 471 (1026)
Q Consensus 398 r~-~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~G-G~~~~~~~~~ 471 (1026)
.. -.+++.. ++.||+.... .+.+.+||+ ++++.... ++........... ++++|+.. +.+.+..++.
T Consensus 182 ~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 182 ASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 11 2233332 5788887532 257999999 77776542 2222222233333 57899886 4456666665
No 157
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.50 E-value=0.81 Score=49.83 Aligned_cols=107 Identities=13% Similarity=0.214 Sum_probs=64.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.++++|+.+ ..+..||..+.+|..+..++..... .+++.. ++..++.|+.++.+.+||..+.++.....+..
T Consensus 19 ~~~~l~~~~~d----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 94 (372)
T 1k8k_C 19 DRTQIAICPNN----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILR 94 (372)
T ss_dssp TSSEEEEECSS----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCC
T ss_pred CCCEEEEEeCC----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeec
Confidence 34566666543 4788999988877665544332222 223333 56777888999999999999988765432221
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
......++.+ ++..++.|+.+ ..+..||..+..
T Consensus 95 ~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~ 129 (372)
T 1k8k_C 95 INRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQEN 129 (372)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTT
T ss_pred CCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCC
Confidence 1222222333 56677777755 346666665443
No 158
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.50 E-value=2.9 Score=44.94 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=80.0
Q ss_pred CcEEEEEcCCCC--CCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEeCCCC
Q psy9769 319 PKVMLVVGGQAP--KAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~~~~~ 394 (1026)
++.+|+...... .....++.+|+.+.+....-+.+. .-++++.. + +.+|+.++.++.+++||+.+.+-...-+.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 129 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVL 129 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEec
Confidence 356777663221 124579999998876543222221 12333333 3 46999888888999999988763221111
Q ss_pred cC--------CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeC
Q psy9769 395 EA--------RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENL 462 (1026)
Q Consensus 395 p~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG 462 (1026)
+. +..-++++.. ++.+|+.+... ...++.||+.+.+-...-+.. .....+++.. ++.+|+...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 130 DDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTEEEEECT
T ss_pred CCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCEEEEEcC
Confidence 11 1112233333 35677776322 257999999877643322211 1111223333 457888777
Q ss_pred CCceeeEEcCc
Q psy9769 463 DGRILGCVKEI 473 (1026)
Q Consensus 463 ~~~~~~~~~~~ 473 (1026)
.+.+..+|..+
T Consensus 205 ~~~i~~~d~~~ 215 (353)
T 3vgz_A 205 DGELITIDTAD 215 (353)
T ss_dssp TSEEEEEETTT
T ss_pred CCeEEEEECCC
Confidence 66666666554
No 159
>3ayh_B DNA-directed RNA polymerase III subunit RPC8; transcription; 2.19A {Schizosaccharomyces pombe}
Probab=91.36 E-value=0.15 Score=50.81 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=47.6
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh-----------------------hhhhcccccccccceee
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY-----------------------NAKYLTNKRVDLDCSVL 702 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~-----------------------~~~~~~G~~~~~~~~Il 702 (1026)
..|++++|+|+++.+.|++|++ +.+.|+++.+++...+ ...|..|++| ++||.
T Consensus 80 ~~GEv~~G~Vs~vt~~GifV~l--g~~eglv~~~~l~~d~~~fd~~~~~~v~~~~~~~~~~~~~~~~~~Gd~V--rvrV~ 155 (203)
T 3ayh_B 80 FRGEVMLGKIKSCSEEGIRVTI--SFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEI--RFQIE 155 (203)
T ss_dssp CTTCEEEEEEEEEETTEEEEEC--SSCCCEEEEGGGBCTTEEEEGGGTEEEEEECCCTTSCCEEEECCTTCEE--EEEEE
T ss_pred CCCCEEEEEEEEEeccEEEEEE--eCceEEEEcHHhCCCCceECccCceEEeecccccccccCCcEEcCCCEE--EEEEE
Confidence 4699999999999999999999 6788887666654322 2348899999 99999
Q ss_pred eecccc
Q psy9769 703 YVCPRH 708 (1026)
Q Consensus 703 ~vd~~~ 708 (1026)
.+|...
T Consensus 156 ~v~~~~ 161 (203)
T 3ayh_B 156 SEDFVD 161 (203)
T ss_dssp EEEECC
T ss_pred EEEccc
Confidence 988744
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.32 E-value=7.3 Score=41.60 Aligned_cols=145 Identities=11% Similarity=0.102 Sum_probs=79.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEeCCCC--
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSSAPPM-- 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~~~~~-- 394 (1026)
++.+|+.+... ...++.||+.+.+-...-+. ....-++++.. + +.+|+.. .++.+.+||+.+.+-...-+.
T Consensus 152 g~~l~~~~~~~---~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 152 TNTVYISGIGK---ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTN-ADGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp TTEEEEEEESS---SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEEC-TTSEEEEEETTTTEEEEEEECCC
T ss_pred CCEEEEEecCC---CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCC
Confidence 45677776221 24689999987654332221 11112233333 3 4676654 477899999988763321111
Q ss_pred cCCcce-eEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeC-CCceee
Q psy9769 395 EARRST-LGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENL-DGRILG 468 (1026)
Q Consensus 395 p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG-~~~~~~ 468 (1026)
..+... .+++.. ++.+|+.+.. .+.+..||+.+++....-+.+.+. +++.. ++.+|+.+. .+.+..
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPESL---AVLFNPARNEAYVTHRQAGKVSV 298 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSCC---CEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCc---eEEECCCCCEEEEEECCCCeEEE
Confidence 111222 223333 4567776532 268999999888765444444432 23333 446888874 556666
Q ss_pred EEcCcccE
Q psy9769 469 CVKEITDW 476 (1026)
Q Consensus 469 ~~~~~~~W 476 (1026)
++..+.+.
T Consensus 299 ~d~~~~~~ 306 (353)
T 3vgz_A 299 IDAKSYKV 306 (353)
T ss_dssp EETTTTEE
T ss_pred EECCCCeE
Confidence 77655443
No 161
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.07 E-value=1.8 Score=52.85 Aligned_cols=105 Identities=10% Similarity=0.188 Sum_probs=67.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--C--CEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--H--EKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.||.+ ..+..||..+.++..+..+.........+.+ + +..++.||.++.+.+||..+++|.....+.
T Consensus 21 g~~latg~~d----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~ 96 (753)
T 3jro_A 21 GKRLATCSSD----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA 96 (753)
T ss_dssp SCCEEEEETT----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCeEEEEECC----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc
Confidence 3455666644 4688888887777766554433333333333 3 678888999999999999999887655443
Q ss_pred CCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 396 ARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 396 ~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
.......++.+ + +.+++.||.+ ..+..||..++
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 22233333333 3 6788888765 47888998765
No 162
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=90.87 E-value=2.8 Score=45.11 Aligned_cols=149 Identities=11% Similarity=0.155 Sum_probs=84.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEe-CCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYD-PSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd-~~~~~W~~~~~~p~ 396 (1026)
++.+|+.|.. ..+++-+-...+|+.+... .+..-++++.. ++.+|++| ..+.+++-+ ..-.+|+.+.. +.
T Consensus 132 ~~~~~~~~~~-----g~v~~S~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~-~~ 203 (327)
T 2xbg_A 132 NGSAEMITNV-----GAIYRTKDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNR-TT 203 (327)
T ss_dssp TTEEEEEETT-----CCEEEESSTTSSEEEEECS-CCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEEC-CS
T ss_pred CCCEEEEeCC-----ccEEEEcCCCCCCEEeecC-CCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECCC-CC
Confidence 4567766642 1344443345689987542 22233444444 45666554 555666543 33578998753 33
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECC-CCcEEEccC--CCCCcceeEEEEE-CCEEEEEeCCCceeeEEc
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPS-TEKWNMIAP--MSTRRSSVGVGVL-NGCLYAENLDGRILGCVK 471 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~ 471 (1026)
+...+.++. -++.+|+.+.. ..++..+.. ..+|+.+.. ++.....++++.. ++.+|+.|+.+.++.-.+
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~D 277 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQD 277 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESS
T ss_pred CCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCC
Confidence 344444443 36788877642 235555333 568987653 3332223333333 678999998877766556
Q ss_pred CcccEEEeec
Q psy9769 472 EITDWGLIIE 481 (1026)
Q Consensus 472 ~~~~W~~~~~ 481 (1026)
...+|..+..
T Consensus 278 gG~tW~~~~~ 287 (327)
T 2xbg_A 278 GGQTWQQDVD 287 (327)
T ss_dssp TTSSCEECGG
T ss_pred CCcccEEcCc
Confidence 6688998863
No 163
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, STR genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=90.72 E-value=0.58 Score=41.07 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=47.6
Q ss_pred CcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccc-----cC-cccccccCCEEEEE
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATR-----TL-VYTRFVIDTVIVCQ 1003 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~-----~~-~~~~~~~G~~V~~~ 1003 (1026)
|..+.+.|+++.+.++-|.+.+|-.+.|+.+.|.|.+- +. +++.+++||.|.++
T Consensus 34 ~~~~~AvV~~v~~~~~~v~~~~g~~~~l~~~~~~WA~~~~~~~~~~~~~~l~~GdvI~V~ 93 (106)
T 3d0f_A 34 DDILAAVVLSATPGAVEAFRKNGETIRITGDGLKAAHRFLSNDPKIGEKRIRPGALIRVK 93 (106)
T ss_dssp TTCEEEEEEEEETTEEEEEETTSCEEEECGGGGSTTGGGTTTCTTTGGGSCCTTEEEEEE
T ss_pred CCeEEEEEEEeCCCeEEEEEcCCCeEEEcHHHChhhhhcccccccchhccCCCCCEEEEE
Confidence 88999999999999999999888888899999999542 34 67789999999987
No 164
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=90.67 E-value=2.9 Score=43.04 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=78.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++.+|+... ...+.+||+.+.....+..... ..-.+++.. +|.+|+....++.+.+|+..+...........
T Consensus 77 ~g~l~v~~~-----~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~- 149 (270)
T 1rwi_B 77 AGTVYVTDF-----NNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL- 149 (270)
T ss_dssp TCCEEEEET-----TTEEEEECTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC-
T ss_pred CCCEEEEcC-----CCEEEEEeCCCceEeeeecCCc-CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC-
Confidence 456887754 2478999998876554432111 112233333 57899987777789999877665443321111
Q ss_pred cceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeC-CCceeeEEcC
Q psy9769 398 RSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENL-DGRILGCVKE 472 (1026)
Q Consensus 398 r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~ 472 (1026)
..-.+++.. +|++|+....+ ..+.+||+.+..-........ ....+++.- ++.+|+... .+.+..++..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 111223333 67899876432 579999998766543321111 122233333 468999874 3455555543
No 165
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=90.51 E-value=0.49 Score=42.61 Aligned_cols=54 Identities=11% Similarity=0.137 Sum_probs=41.0
Q ss_pred CcEEEEEEEEEecceEEEEeCCCce--eeEeccccCcccccCcccccccCCEEEEE
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDGDIS--GVFPTSAMSQATRTLVYTRFVIDTVIVCQ 1003 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~~i~--Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~ 1003 (1026)
|.-..|+|+.+.+.+++|.|.++-. --+|.+++.--.-......|.+||+|++-
T Consensus 15 G~~y~a~V~~v~~d~~~V~f~n~w~~~~~vp~~~vRlpP~~~~~~~f~~gd~VEV~ 70 (128)
T 3h8z_A 15 GAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGDEVEVY 70 (128)
T ss_dssp SCEEEEEEEEECSSEEEEEETTCTTCCEEEEGGGEECCCCC----CCCTTCEEEEE
T ss_pred CCEEEEEEEEEeCCcEEEEEccccCcceEechhhEEcCCCcccccCCCCCCEEEEE
Confidence 8999999999999999999998654 47888888542222233569999999874
No 166
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.38 E-value=6.1 Score=43.86 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=66.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc---cccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT---RRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~ 393 (1026)
++.+++.++.+ ..+..||+.+.+.....+.+. .......+.+ ++.+|+.|+.++.+.+||+.+.+....-.
T Consensus 133 ~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~ 208 (433)
T 3bws_A 133 NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD 208 (433)
T ss_dssp SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEeCCC----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc
Confidence 56788877654 358999999887765433221 1111222233 68999999999999999998765432111
Q ss_pred CcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEc
Q psy9769 394 MEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 394 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
. ....-.+++.. +..+|+.++.+ ..+..||+.+++....
T Consensus 209 ~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 209 L-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRK 249 (433)
T ss_dssp C-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred C-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEE
Confidence 1 11112223333 34577776543 4799999988876443
No 167
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.33 E-value=13 Score=38.33 Aligned_cols=145 Identities=8% Similarity=0.051 Sum_probs=81.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+|+.... ...+..||+. .++..+. ++..... ++++.- ++.+|+....++.+.+||+. .++........
T Consensus 30 ~g~l~v~~~~----~~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 30 DGKVWFTQHK----ANKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp TSCEEEEETT----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred CCCEEEEcCC----CCeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence 4668876532 2478899988 6766543 2222122 233332 47899987667789999998 66654321111
Q ss_pred CcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCc-ceeEEEEE-CCEEEEEeC-CCceeeEEcC
Q psy9769 397 RRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRR-SSVGVGVL-NGCLYAENL-DGRILGCVKE 472 (1026)
Q Consensus 397 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~-~~~lyv~GG-~~~~~~~~~~ 472 (1026)
...-++++.. ++.+|+....+ ..+.+||+. ++..... ++... ...+++.- ++++|+... .+.+..++.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred CCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 1222333333 68899875322 578999997 6665432 22222 22233332 577998864 345666655
Q ss_pred cccEEE
Q psy9769 473 ITDWGL 478 (1026)
Q Consensus 473 ~~~W~~ 478 (1026)
..++..
T Consensus 175 ~g~~~~ 180 (300)
T 2qc5_A 175 TGKLEE 180 (300)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 444443
No 168
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.21 E-value=1.4 Score=48.04 Aligned_cols=136 Identities=14% Similarity=0.161 Sum_probs=75.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--C--CEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--H--EKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+.+++.|+.+ ..+..||..+.+|..+..+.........+.+ + +.+++.|+.++.+.+||..+........+.
T Consensus 69 ~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 69 GTILASCSYD----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp CSEEEEEETT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE
T ss_pred CCEEEEeccC----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec
Confidence 4556666654 3688899988888766554433233333333 2 678888999999999999876321110111
Q ss_pred C-CcceeEEEEE--------------CCEEEEEeccCCCCCCCEEEEEECCCC--cEEEccCCCCCcceeEEEEE--C--
Q psy9769 396 A-RRSTLGVAVL--------------NSLIYAVGGFDGSSGLNSAEVYDPSTE--KWNMIAPMSTRRSSVGVGVL--N-- 454 (1026)
Q Consensus 396 ~-~r~~~~~~~~--------------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~-- 454 (1026)
. ...-.+++.. ++..++.|+.++ .+..||..++ .|.....+.........+.+ +
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 1 1111122222 467888887653 5778887544 36554443322222223333 3
Q ss_pred -CEEEEEeCCC
Q psy9769 455 -GCLYAENLDG 464 (1026)
Q Consensus 455 -~~lyv~GG~~ 464 (1026)
+.+++.|+.+
T Consensus 220 ~~~~l~s~~~d 230 (379)
T 3jrp_A 220 LRSYLASVSQD 230 (379)
T ss_dssp SSEEEEEEETT
T ss_pred CCCeEEEEeCC
Confidence 6777777644
No 169
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.21 E-value=0.26 Score=43.32 Aligned_cols=36 Identities=14% Similarity=-0.008 Sum_probs=32.7
Q ss_pred eeeechhhHHHHHHHHHhcCchhHHhHHHHhhhccc
Q psy9769 127 EIYVTEENVQMLLPAANLLQLTDVRDACCDFLQCQL 162 (1026)
Q Consensus 127 ~~~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l 162 (1026)
.-.++++||..++.+|+.|++++|.+.|.+|+..++
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 345899999999999999999999999999998774
No 170
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.15 E-value=8.3 Score=39.95 Aligned_cols=144 Identities=7% Similarity=-0.034 Sum_probs=79.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC-
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA- 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~- 396 (1026)
++.+|+.... ...+.+||+. .++...........-++++.- +|.+|+....++.+.+||+. .+..... ++.
T Consensus 72 ~g~l~v~~~~----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~ 144 (300)
T 2qc5_A 72 LGDIWFTENG----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-LPNK 144 (300)
T ss_dssp TSCEEEEETT----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-CSST
T ss_pred CCCEEEEecC----CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-CCCC
Confidence 4567776432 2468899988 667644321111222333333 57899887667789999987 5554332 221
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCC-CceeeEEcC
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLD-GRILGCVKE 472 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~-~~~~~~~~~ 472 (1026)
...-.+++. -++++|+.... ...+.+||+ ++++.... ++........... ++.||+.... +.+..++.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred CCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence 112223333 25778886532 257999999 67776543 2222222223333 5789988643 34666655
Q ss_pred cccEE
Q psy9769 473 ITDWG 477 (1026)
Q Consensus 473 ~~~W~ 477 (1026)
..++.
T Consensus 217 ~g~~~ 221 (300)
T 2qc5_A 217 TGEIS 221 (300)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 43443
No 171
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.75 E-value=2.8 Score=43.98 Aligned_cols=144 Identities=12% Similarity=0.169 Sum_probs=71.7
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcc-
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRS- 399 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~- 399 (1026)
..++.|+.+ ..+..||.... -..+..............-++. ++.|+.++.+.+||..+.+-.. .+.....
T Consensus 156 ~~l~~~~~d----~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~ 227 (313)
T 3odt_A 156 NKFLTASAD----KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR--TYEGHESF 227 (313)
T ss_dssp TEEEEEETT----SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE--EEECCSSC
T ss_pred CEEEEEECC----CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh--hhhcCCce
Confidence 345555543 35777883322 1222221122222223334667 7888999999999998765321 1111111
Q ss_pred eeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCCCceeeEEcCcccEE
Q psy9769 400 TLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDGRILGCVKEITDWG 477 (1026)
Q Consensus 400 ~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~W~ 477 (1026)
-.+++.. +++ ++.||.+ ..+..||+.+.+....-..+..... +++.. ++++++.+..+.+.-++.....|.
T Consensus 228 i~~~~~~~~~~-l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 228 VYCIKLLPNGD-IVSCGED-----RTVRIWSKENGSLKQVITLPAISIW-SVDCMSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EEEEEECTTSC-EEEEETT-----SEEEEECTTTCCEEEEEECSSSCEE-EEEECTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred EEEEEEecCCC-EEEEecC-----CEEEEEECCCCceeEEEeccCceEE-EEEEccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 1222232 454 5566654 5799999988765443322222211 22222 566555444555666666555554
Q ss_pred Ee
Q psy9769 478 LI 479 (1026)
Q Consensus 478 ~~ 479 (1026)
..
T Consensus 301 ~~ 302 (313)
T 3odt_A 301 SE 302 (313)
T ss_dssp C-
T ss_pred eh
Confidence 43
No 172
>2rf4_A DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=89.63 E-value=0.67 Score=46.40 Aligned_cols=67 Identities=6% Similarity=0.011 Sum_probs=49.0
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCc--ccccCc----------ccccccCCEEEEEEEEEeCCeeee
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQ--ATRTLV----------YTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~--~~~~~~----------~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
.+|++++|+|..+.+.|+.+-..+-...+||...|.+ ....+. .+.-++|+.|++||.+++.....|
T Consensus 128 f~GevL~G~V~~~s~~~Ig~~~~G~Fn~~Ip~~~ip~~~~f~~~~~~~~~~~wv~~~~~~ig~~IRFrV~~~~~~~~~l 206 (214)
T 2rf4_A 128 QVGDVLEGYIFIQSASHIGLLIHDAFNASIKKNNIPVDWTFVHNDGNRSLGHWVDSNGEPIDGKLRFTVRNVHTTGRVV 206 (214)
T ss_dssp CTTCEEEEEECCCCSSCEEEEETTTEEEEECSTTSCSSCBCCCCSCC-CCCCCBCSSCCBCCSEEEEEEEEEECCSSSC
T ss_pred CCCCEEEEEEEEECCCcEEEEEeCCEEEEEcHHHCCCcccccccccccCCCceEcCCCCCCCCEEEEEEEEEEecCCEE
Confidence 3499999999999998887766777778999999853 221111 112247999999999999755333
No 173
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.59 E-value=0.42 Score=52.48 Aligned_cols=137 Identities=15% Similarity=0.178 Sum_probs=70.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCe-EEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNE-WSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~-W~~~~~~p 395 (1026)
++.+++.|+.+ ..+..||..++.|..+..+.........+.+ ++..++.|+.++.+.+||..+.. |.....+.
T Consensus 22 ~g~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 22 QRTEFVTTTAT----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SSSEEECCCSS----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECC
T ss_pred CCCEEEEecCC----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec
Confidence 34566666644 3567788888888887766543333222333 46788889999999999998877 54433222
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc-EEEccCCCC--CcceeEEEEE-CCEEEEEeCCC
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK-WNMIAPMST--RRSSVGVGVL-NGCLYAENLDG 464 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~--~r~~~~~~~~-~~~lyv~GG~~ 464 (1026)
.......++.+ +++.++.|+.+ ..+..||..+++ |.....+.. ...-.+++.. ++++.+.|+.+
T Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 98 RLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred ccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 11222222222 56777777765 357788887664 433333222 1112222222 45566666543
No 174
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=89.30 E-value=3.8 Score=46.24 Aligned_cols=140 Identities=11% Similarity=0.140 Sum_probs=78.0
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcc
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRS 399 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~ 399 (1026)
..++.|+.+ ..+..||..+.+-...-....... .+++. -++..++.|+.++.+.+||..+.+-.. .+.....
T Consensus 281 ~~l~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~~h~~ 353 (464)
T 3v7d_B 281 NIVVSGSYD----NTLIVWDVAQMKCLYILSGHTDRI-YSTIYDHERKRCISASMDTTIRIWDLENGELMY--TLQGHTA 353 (464)
T ss_dssp TEEEEEETT----SCEEEEETTTTEEEEEECCCSSCE-EEEEEETTTTEEEEEETTSCEEEEETTTTEEEE--EECCCSS
T ss_pred CEEEEEeCC----CeEEEEECCCCcEEEEecCCCCCE-EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE--EEeCCCC
Confidence 344555443 358889987765332211111111 22222 256677889999999999998875322 1111222
Q ss_pred eeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc
Q psy9769 400 TLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 400 ~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
...+..+++..++.|+.+ ..+..||+.+..-...... .......+...++.+.+.|+.+.+.-++..+
T Consensus 354 ~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 354 LVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYHH-TNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp CEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEEC-TTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred cEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeecC-CCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 234445567777777765 4688999987653322211 1122233445577777777766665555544
No 175
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.18 E-value=5 Score=43.29 Aligned_cols=115 Identities=12% Similarity=-0.005 Sum_probs=65.3
Q ss_pred CCEEEEEeccCCCeEEEeCCCCe---------E-------EeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEE
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNE---------W-------SSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAE 426 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~---------W-------~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 426 (1026)
++..++.|+.++.+.+||..... | ..+..+........++.+ ++..++.|+.+ ..+.
T Consensus 153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~ 227 (372)
T 1k8k_C 153 NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVC 227 (372)
T ss_dssp TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEE
T ss_pred CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEE
Confidence 56788889999999999964211 1 111111111111222333 56667777754 4688
Q ss_pred EEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc--ccEEEeecCCC
Q psy9769 427 VYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI--TDWGLIIELPN 484 (1026)
Q Consensus 427 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~--~~W~~~~~lP~ 484 (1026)
.||..+.+-...-..........+..-++++++.|..+.+.-++... ++|..+..++.
T Consensus 228 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 228 LADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp EEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCC
T ss_pred EEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCc
Confidence 99987765432211111111112223378888888767766666666 88998877754
No 176
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.18 E-value=10 Score=45.52 Aligned_cols=119 Identities=23% Similarity=0.303 Sum_probs=73.6
Q ss_pred CCccCCcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCcc-----c---cceeeEEECCEEEEEeccCCCeEEEeC
Q psy9769 314 QPLRVPKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTR-----R---CRAGLVFLHEKVYAVGGFNGSLRVYDP 383 (1026)
Q Consensus 314 ~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~-----r---~~~~~~~~~~~iyv~GG~~~~~~~yd~ 383 (1026)
.++..++.+|+... ...++++|..+. .|+.-...+.. . ...+.++.++.||+. ..++.++.+|.
T Consensus 65 ~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~-~~dg~l~AlDa 138 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP-----FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVG-VLDGRLEAIDA 138 (689)
T ss_dssp CCEEETTEEEEECG-----GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE-CTTSEEEEEET
T ss_pred cCEEECCEEEEEcC-----CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEE-ccCCEEEEEEC
Confidence 34456788888754 246999998765 48864433211 1 122356778898874 55778999999
Q ss_pred CCCe--EEeCCC-CcC--CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEc
Q psy9769 384 STNE--WSSAPP-MEA--RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMI 438 (1026)
Q Consensus 384 ~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 438 (1026)
.|.+ |+.-.. -+. .....+.++.++.+|+-.+.........+..||+.|++ |+.-
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 8875 876432 111 11122345679999874332111224689999998886 8754
No 177
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.00 E-value=9.8 Score=45.48 Aligned_cols=119 Identities=22% Similarity=0.283 Sum_probs=73.5
Q ss_pred CCccCCcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCccc--------cceeeEEECCEEEEEeccCCCeEEEeC
Q psy9769 314 QPLRVPKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTRR--------CRAGLVFLHEKVYAVGGFNGSLRVYDP 383 (1026)
Q Consensus 314 ~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~yd~ 383 (1026)
.++..++.+|+... ...++++|..+. .|+.-...+... ...+.++.+++||+. ..++.++.+|.
T Consensus 61 ~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~dg~l~alD~ 134 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS-----WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVG-TLDGRLIALDA 134 (668)
T ss_dssp CCEEETTEEEEEEG-----GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEE-CTTSEEEEEET
T ss_pred CCEEECCEEEEECC-----CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEE-cCCCEEEEEEC
Confidence 34456788888764 247999998765 488654332210 123356678898874 45778999999
Q ss_pred CCCe--EEeCCCCcC--CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEc
Q psy9769 384 STNE--WSSAPPMEA--RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMI 438 (1026)
Q Consensus 384 ~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 438 (1026)
.|.+ |+.-..-+. .....+.++.++.+|+..+.........+..||+.+++ |+.-
T Consensus 135 ~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 135 KTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 8875 876432111 11222335678998875332211224689999998876 8753
No 178
>2ja9_A Exosome complex exonuclease RRP40; RNA-binding protein, RNA, S1 domain, KH domain, hydrolase, RNA-binding, nuclear protein; 2.20A {Saccharomyces cerevisiae} SCOP: b.40.4.5 d.51.1.1
Probab=88.88 E-value=0.33 Score=46.79 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=45.8
Q ss_pred cccCcccccccccccccceeeeecccceeeeeeccc-----------cccCceEEEEEeeeeec
Q psy9769 562 LETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDS-----------VILGQIVTCMISKIKVA 614 (1026)
Q Consensus 562 l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~-----------~~~G~~v~~~v~~~~~~ 614 (1026)
.+.|++|-|.|.++..+++.|++|.....|++|... +.+|+.|.|+|..++..
T Consensus 5 P~~gDvViG~V~~v~~~~~~VdI~~~~~~a~L~~s~~~g~~k~~r~~l~~GDlV~ArV~~~~~~ 68 (175)
T 2ja9_A 5 PSVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFPNASKKNRPTLQVGDLVYARVCTAEKE 68 (175)
T ss_dssp CCTTCEEEEEEEEECSSEEEEESSTTSCCEEEETTSSTTCCSSSCCCCCTTCEEEEEEEECCTT
T ss_pred CCCcCEEEEEEEEEECcEEEEEECCCCccEEEEHHHCCchhhhhhccCCCCCEEEEEEEEecCC
Confidence 467999999999999999999998535789998533 88999999999998765
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.83 E-value=2.7 Score=44.95 Aligned_cols=146 Identities=7% Similarity=0.013 Sum_probs=79.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccC----CCeEEEeCCCCeEEe-CC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFN----GSLRVYDPSTNEWSS-AP 392 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~----~~~~~yd~~~~~W~~-~~ 392 (1026)
++.+|+.+..+ ..+++||+.+.++..+...+. ..-.+++. -+|.+|+.+..+ +.+++||+.+..... +.
T Consensus 55 ~g~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 55 QGQLFLLDVFE----GNIFKINPETKEIKRPFVSHK-ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp TSCEEEEETTT----CEEEEECTTTCCEEEEEECSS-SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEECCC----CEEEEEeCCCCcEEEEeeCCC-CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 45688776532 479999999988876532111 11223333 257888876544 578999998876542 22
Q ss_pred CCcCCcceeEEEE-ECCEEEEEeccC-CCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEEeC-CCcee
Q psy9769 393 PMEARRSTLGVAV-LNSLIYAVGGFD-GSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAENL-DGRIL 467 (1026)
Q Consensus 393 ~~p~~r~~~~~~~-~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG-~~~~~ 467 (1026)
.......-..++. -+|.+|+..... .......+++||+.+++...+..- .....+.+.. ++ .||+... .+.+.
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCCCeEE
Confidence 2221222222222 267888864321 111235799999988777654311 0111223322 33 5888753 34555
Q ss_pred eEEc
Q psy9769 468 GCVK 471 (1026)
Q Consensus 468 ~~~~ 471 (1026)
.|+.
T Consensus 208 ~~d~ 211 (333)
T 2dg1_A 208 RIAL 211 (333)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5544
No 180
>2nn6_H Exosome complex exonuclease RRP4; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=88.77 E-value=0.29 Score=51.71 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=54.4
Q ss_pred cccCCceEEeeeecccCCcceeeccccceeeccCcccccch-----h---------hhhhcccccccccceeeeeccccc
Q psy9769 644 NLVPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTA-----Y---------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 644 ~l~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~-----~---------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
..++|++|.|+|+++.+.|++|++. ....|+++.+.++.. . .+.|++|+-| .|||+.++. ..
T Consensus 92 ~P~vGDvViG~Vt~V~~~~a~VdI~-s~~~~~l~iS~v~f~gg~iR~~~~~D~~~m~~~l~vGDlV--~ArVisv~~-~~ 167 (308)
T 2nn6_H 92 IGEVGDIVVGRITEVQQKRWKVETN-SRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLI--SAEVQAVFS-DG 167 (308)
T ss_dssp CCCSSBCCCEEEEEEETTEEEEECS-SSSCEEEESSCCC-------------CHHHHHHSCSSCEE--CCEEEEEET-TT
T ss_pred CCCCCCEEEEEEEEEeCceEEEEEC-CCcCCceechhhccccceeecccchhhhhhhccCCCCCEE--EEEEEEcCC-CC
Confidence 4578999999999999999999993 356666655444321 1 3679999999 999999995 45
Q ss_pred eEEeechh
Q psy9769 710 HVYLSCNE 717 (1026)
Q Consensus 710 ~v~lS~k~ 717 (1026)
.+.||.++
T Consensus 168 ~i~LStr~ 175 (308)
T 2nn6_H 168 AVSLHTRS 175 (308)
T ss_dssp EEEEECCS
T ss_pred CEEEEecC
Confidence 78888876
No 181
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.68 E-value=4.4 Score=43.97 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=59.8
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+..++.|+.+ ..+..||..+.+....-. .......++.+ ++..++.|+.++.+.+||..+..-...-.....
T Consensus 210 g~~l~sgs~D----g~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~ 283 (354)
T 2pbi_B 210 GNTFVSGGCD----KKAMVWDMRSGQCVQAFE--THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI 283 (354)
T ss_dssp CCEEEEEETT----SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC
T ss_pred CCEEEEEeCC----CeEEEEECCCCcEEEEec--CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc
Confidence 3566667654 368889988776543211 11111112222 567888899999999999987653222111111
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.....++.+ ++.+.+.|+.+ ..+..||..+++
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~ 317 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYND-----YTINVWDVLKGS 317 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCS
T ss_pred ccceeEEEEeCCCCEEEEEECC-----CcEEEEECCCCc
Confidence 222223333 67777777755 468899986654
No 182
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=88.59 E-value=4.1 Score=43.83 Aligned_cols=105 Identities=12% Similarity=0.200 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+++.|+.+ ..+..||..+..-... +...... .+++. -++..++.|+.++.+.+||..+.+-...-..+.
T Consensus 195 ~~~~l~sg~~d----~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 195 DTRLFVSGACD----ASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp TSSEEEEEETT----SCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCCEEEEEeCC----CcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 34566777654 3678888877643321 1111111 12222 257788899999999999998765322111111
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
......++.+ ++++++.|+.+ ..+..||..+..
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~ 303 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDD-----FNCNVWDALKAD 303 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCC
T ss_pred cccceEEEEECCCCCEEEEECCC-----CeEEEEEcccCc
Confidence 1112223333 67788888765 468899976544
No 183
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.49 E-value=6.3 Score=42.45 Aligned_cols=156 Identities=13% Similarity=0.235 Sum_probs=83.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc--cccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT--RRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
++.+++.||.+ ..+..||..++.|.....+.. ...-.+++. -++...+.|+.++.+.+||..+..+..+..+.
T Consensus 27 ~g~~las~~~D----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 102 (345)
T 3fm0_A 27 AGTLLASCGGD----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE 102 (345)
T ss_dssp TSSCEEEEETT----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC
T ss_pred CCCEEEEEcCC----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc
Confidence 34556666654 357788888887754322211 111112222 25778888999999999998887765443332
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCC-cEEEccCCCCCcceeEEEEE--CCEEEEEeCC-CceeeE
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTE-KWNMIAPMSTRRSSVGVGVL--NGCLYAENLD-GRILGC 469 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~-~~~~~~ 469 (1026)
.......++.+ ++++++.|+.+ ..+..||+.+. .+..+..+.........+.. ++.+++.|+. +.+.-+
T Consensus 103 ~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 21122222333 67777888765 45778887654 33333222221122222222 4556666654 444555
Q ss_pred EcCcccEEEeecCC
Q psy9769 470 VKEITDWGLIIELP 483 (1026)
Q Consensus 470 ~~~~~~W~~~~~lP 483 (1026)
+.....|.....+.
T Consensus 178 ~~~~~~~~~~~~~~ 191 (345)
T 3fm0_A 178 REEEDDWVCCATLE 191 (345)
T ss_dssp EEETTEEEEEEEEC
T ss_pred EecCCCEEEEEEec
Confidence 55556666555443
No 184
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.48 E-value=3.9 Score=47.97 Aligned_cols=116 Identities=13% Similarity=0.161 Sum_probs=73.8
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeC-CCCe--EEeCCCCcCC-----c---ceeEEEEECCEEEEEeccCCCCCCCEEEE
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDP-STNE--WSSAPPMEAR-----R---STLGVAVLNSLIYAVGGFDGSSGLNSAEV 427 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~-~~~~--W~~~~~~p~~-----r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 427 (1026)
.+-++.++.||+....++.++.+|. .+.+ |+.-...+.. . ...+.++.+++||+... -..+.+
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~a 129 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLA 129 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEE
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCEEEE
Confidence 3445679999998765778999999 7754 9864432211 1 11234567999998643 157999
Q ss_pred EECCCCc--EEEccCCCC-C-cceeEEEEECCEEEEEeC------CCceeeEEcCcc--cEEEee
Q psy9769 428 YDPSTEK--WNMIAPMST-R-RSSVGVGVLNGCLYAENL------DGRILGCVKEIT--DWGLII 480 (1026)
Q Consensus 428 yd~~~~~--W~~~~~~p~-~-r~~~~~~~~~~~lyv~GG------~~~~~~~~~~~~--~W~~~~ 480 (1026)
+|..+++ |+.-..-+. . ....+-++.++.+|+-.+ .+.+..+|..+. .|+.-.
T Consensus 130 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 130 LDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 9998774 875332111 1 112233456899988754 467788888763 497654
No 185
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=88.47 E-value=4.9 Score=42.37 Aligned_cols=105 Identities=12% Similarity=0.288 Sum_probs=59.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccce-eeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRA-GLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+++.|+.+ ..+..||..+.+-... +....... +++. -++..++.|+.++.+.+||..+.+-... ++.
T Consensus 76 ~~~~l~s~~~d----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~~ 147 (312)
T 4ery_A 76 DSNLLVSASDD----KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT--LPA 147 (312)
T ss_dssp TSSEEEEEETT----SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE--ECC
T ss_pred CCCEEEEECCC----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE--ecC
Confidence 34556666644 4688899887653321 11111111 1122 2467778899999999999987653221 111
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.........+ ++.+++.|+.+ ..+..||+.+.+..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCL 184 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcee
Confidence 1111222233 56777888765 46889999877653
No 186
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.44 E-value=9.6 Score=44.53 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=73.2
Q ss_pred CCCccCCcEEEEEcCCCCCCCcEEEEEEC-CCC--cEEEcCCCCcc--------ccceeeEEECCEEEEEeccCCCeEEE
Q psy9769 313 RQPLRVPKVMLVVGGQAPKAIRSVECYDF-KTE--RWQSVAEMPTR--------RCRAGLVFLHEKVYAVGGFNGSLRVY 381 (1026)
Q Consensus 313 ~~~~~~~~~i~v~GG~~~~~~~~~~~yd~-~~~--~W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~y 381 (1026)
..++..++.+|+.... ...++++|. .+. .|+.-...+.. ....+.++.++.||+. ..++.++.+
T Consensus 56 ~~P~v~~g~vyv~~~~----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~dg~l~al 130 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKK-QANGHLLAL 130 (571)
T ss_dssp SCCEEETTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE-CTTSEEEEE
T ss_pred cccEEECCEEEEEeCC----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEE-eCCCEEEEE
Confidence 3445568888887652 246999998 665 48864432211 1123456778999875 346789999
Q ss_pred eCCCCe--EEeC-CCCcCC-cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEc
Q psy9769 382 DPSTNE--WSSA-PPMEAR-RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMI 438 (1026)
Q Consensus 382 d~~~~~--W~~~-~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 438 (1026)
|..+.+ |+.- ...+.. ....+.++.++.+|+..+.........+..||+.+++ |+.-
T Consensus 131 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 998874 8753 221111 1122334568998876432111123689999998775 8754
No 187
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=88.38 E-value=5.8 Score=42.65 Aligned_cols=123 Identities=13% Similarity=0.223 Sum_probs=65.6
Q ss_pred cEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSL 409 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 409 (1026)
..+..||..+.+.... +...... .+++. -++.+++.|+.++.+.+||..+..-... +........++.+ ++.
T Consensus 164 ~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~ 239 (340)
T 1got_B 164 TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--FTGHESDINAICFFPNGN 239 (340)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSS
T ss_pred CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCC
Confidence 3578889887654321 1111111 12222 2567888999999999999987653221 1111111122222 677
Q ss_pred EEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCCc
Q psy9769 410 IYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDGR 465 (1026)
Q Consensus 410 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 465 (1026)
.++.|+.+ ..+..||+.+++-...-..+........+.+ ++++.+.|+.+.
T Consensus 240 ~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 240 AFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp EEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC
Confidence 78888865 4688899887654322121211122223333 566777776543
No 188
>2vnu_D Exosome complex exonuclease RRP44; hydrolase-RNA complex, RNA degradation, RNA-binding, RNA Pro; HET: 1PE; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.5 b.40.4.5 b.40.4.5 b.40.4.16
Probab=88.23 E-value=0.2 Score=60.59 Aligned_cols=66 Identities=9% Similarity=0.055 Sum_probs=49.0
Q ss_pred ceEEeeeecccCCcceeeccccceeeccCccccc--chh-------------------hhhhcccccccccceeeeeccc
Q psy9769 649 MKVIANICQQLPHGWKAKLKNTQFKAFISPEAMS--TAY-------------------NAKYLTNKRVDLDCSVLYVCPR 707 (1026)
Q Consensus 649 ~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~--~~~-------------------~~~~~~G~~~~~~~~Il~vd~~ 707 (1026)
...+|+|.++.++|++|.+...|+.|+++.+.++ ..+ ...|++|++| +++|+.+|.+
T Consensus 671 ~~~~g~V~~V~~~G~fV~l~~~giEGlVhis~L~~~~d~~~fd~~~~~l~g~~~~~~~~~~~~lGD~V--~VkV~~vd~~ 748 (760)
T 2vnu_D 671 STETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKV--EVQVRSVMDP 748 (760)
T ss_dssp SEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHCSCGGGCEEETTTTEEEECCTTCSSCEEEETTCEE--EEEEC-----
T ss_pred eEEEEEEEEEECCeEEEEEeCCCcEEEEEeccccCCCceeEEcccccEEEEecCCCccCcEEecCCEE--EEEEEEEECc
Confidence 6899999999999999999544899999888874 221 2569999999 9999999998
Q ss_pred ---cceEEeech
Q psy9769 708 ---HFHVYLSCN 716 (1026)
Q Consensus 708 ---~~~v~lS~k 716 (1026)
++++.||+|
T Consensus 749 ~~~~~kI~lslk 760 (760)
T 2vnu_D 749 ITSKRKAELLLK 760 (760)
T ss_dssp ---CCEEEC---
T ss_pred cccCCcEEEEeC
Confidence 689999886
No 189
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.15 E-value=5.6 Score=41.78 Aligned_cols=105 Identities=8% Similarity=0.203 Sum_probs=59.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.|+.+ ..+..||..+.....+..+...... .+++.. ++.+++.|+.++.+.+||..+..|..+..+.
T Consensus 21 g~~las~s~D----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 96 (297)
T 2pm7_B 21 GKRMATCSSD----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA 96 (297)
T ss_dssp SSEEEEEETT----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC
T ss_pred CCEEEEEeCC----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee
Confidence 4556666654 3577888765443322222211111 122222 2678888999999999999988776543322
Q ss_pred CCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 396 ARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 396 ~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
.......++.+ + +.+++.|+.+ ..+..||+.++
T Consensus 97 ~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~ 133 (297)
T 2pm7_B 97 VHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKEN 133 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSS
T ss_pred cCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCC
Confidence 11122223333 2 5677777765 46778887654
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=88.10 E-value=5.4 Score=41.61 Aligned_cols=137 Identities=14% Similarity=0.010 Sum_probs=76.3
Q ss_pred cEEEEEECCCCc-EEEc-C-CCCc--cccceeeEEECCEEEEEeccCCCeEEEeCCCC-eEEeCCCCcCCcceeEEEE-E
Q psy9769 334 RSVECYDFKTER-WQSV-A-EMPT--RRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTN-EWSSAPPMEARRSTLGVAV-L 406 (1026)
Q Consensus 334 ~~~~~yd~~~~~-W~~~-~-~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~ 406 (1026)
..++++|+.... |+.- . ..+. ..........+|.+++....++.+.+||+.-+ .|+.-.+. .+ +++.. .
T Consensus 99 ~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~-~~---~~~~~~~ 174 (276)
T 3no2_A 99 STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSG-TP---FSSAFLD 174 (276)
T ss_dssp EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSS-CC---CEEEECT
T ss_pred CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCC-Cc---cceeEcC
Confidence 467888885442 4321 1 1111 12222334446777777777788999999732 37654321 11 23333 4
Q ss_pred CCEEEEEeccCCCCCCCEEEEEECCCCc--EEEcc-CCCCCcc--eeEEEEE-CCEEEEEe--C---------CCceeeE
Q psy9769 407 NSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIA-PMSTRRS--SVGVGVL-NGCLYAEN--L---------DGRILGC 469 (1026)
Q Consensus 407 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~-~~p~~r~--~~~~~~~-~~~lyv~G--G---------~~~~~~~ 469 (1026)
+|.+++.+..+ ..+..+|+.+++ |+.-. ..+..+. ..+++.. ++.+||.. | ......+
T Consensus 175 ~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~ 249 (276)
T 3no2_A 175 NGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEI 249 (276)
T ss_dssp TSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEE
T ss_pred CCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEE
Confidence 78888876543 479999999665 77643 2332222 2233333 88999987 3 2235555
Q ss_pred EcCcc-cEEEe
Q psy9769 470 VKEIT-DWGLI 479 (1026)
Q Consensus 470 ~~~~~-~W~~~ 479 (1026)
+.+.+ .|+.-
T Consensus 250 ~~~g~~~W~~~ 260 (276)
T 3no2_A 250 DSEGKVVWQLN 260 (276)
T ss_dssp CTTSBEEEEEC
T ss_pred CCCCCEEEEec
Confidence 55433 37754
No 191
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.05 E-value=0.3 Score=53.98 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=60.9
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCC--eEEeCCC
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTN--EWSSAPP 393 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~--~W~~~~~ 393 (1026)
.++.+|+.+.. ..++++|..+. .|+.-. . ....+.++.++.+|+.|+.++.++.+|..+. .|+.-..
T Consensus 8 ~~~~v~~gs~d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLD-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETT-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCC-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 45667765432 37899998766 476533 1 1122334456779998888899999998664 4654222
Q ss_pred CcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEE
Q psy9769 394 MEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCV 470 (1026)
Q Consensus 394 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~ 470 (1026)
.+.... .+.+. .++.+|+ |+.+ ..+..+|+.+++ |+.-.... .+ .+..++.+|+.+..+.+.-+|
T Consensus 79 ~~~~~~-~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 79 IPELVQ-ASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYLGRTEYTITMYD 146 (369)
T ss_dssp HHHHHT-TCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEEEEEEEEEECCC
T ss_pred Cccccc-cCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEEEecCCEEEEEE
Confidence 111111 11111 3555654 3322 468899988665 76432211 11 111456677655445566666
Q ss_pred cCcc--cEEEe
Q psy9769 471 KEIT--DWGLI 479 (1026)
Q Consensus 471 ~~~~--~W~~~ 479 (1026)
..+. .|..-
T Consensus 147 ~~tG~~~W~~~ 157 (369)
T 2hz6_A 147 TKTRELRWNAT 157 (369)
T ss_dssp SSSSSCCCEEE
T ss_pred CCCCCEEEeEe
Confidence 5543 37654
No 192
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=88.03 E-value=22 Score=37.84 Aligned_cols=139 Identities=13% Similarity=0.109 Sum_probs=75.6
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCe--EEeCCC-C-----cCCcce-eEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNE--WSSAPP-M-----EARRST-LGV 403 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~-~-----p~~r~~-~~~ 403 (1026)
..+..+|+.+.+.........-..-+.+++- +|.+|+....++.+.+||+.... -..+.. . +..... .++
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 3689999987765432111110111233333 57899998888889999987651 122211 0 111112 233
Q ss_pred EEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCC-------CCCcc-eeEEEEE-C-CEEEEEeC-CCceeeEE
Q psy9769 404 AVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPM-------STRRS-SVGVGVL-N-GCLYAENL-DGRILGCV 470 (1026)
Q Consensus 404 ~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~lyv~GG-~~~~~~~~ 470 (1026)
++. ++.||+..++. ...+.+||+....-..+... +.... ..++++- + +.|||... .+.+..|+
T Consensus 149 a~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence 443 68999997531 26799999755443433211 11112 2344443 4 89999975 44566676
Q ss_pred cCcccE
Q psy9769 471 KEITDW 476 (1026)
Q Consensus 471 ~~~~~W 476 (1026)
..+.++
T Consensus 225 ~~~G~~ 230 (329)
T 3fvz_A 225 TDTKEF 230 (329)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 664444
No 193
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.88 E-value=2.8 Score=45.40 Aligned_cols=137 Identities=12% Similarity=0.197 Sum_probs=74.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCe-EEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNE-WSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~-W~~~~~~p 395 (1026)
++..++.|+.+ ..+..||..+..+..+..+.........+.+ ++..++.|+.++.+.+||..+.. +..+..+.
T Consensus 72 ~g~~l~s~s~D----~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 147 (345)
T 3fm0_A 72 CGNYLASASFD----ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN 147 (345)
T ss_dssp TSSEEEEEETT----SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEEECC----CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec
Confidence 34566666654 3567778777766554433322222222222 57788889999999999987642 33222111
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCC
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDG 464 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 464 (1026)
........+.+ ++.+++.|+.+ ..+..||..++.|.....+.........+.+ +++..+.|+.+
T Consensus 148 ~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 148 SHTQDVKHVVWHPSQELLASASYD-----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp CCCSCEEEEEECSSSSCEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 11111222222 56777777765 3578899888888755443322222222333 55666666644
No 194
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=87.85 E-value=0.4 Score=54.40 Aligned_cols=70 Identities=9% Similarity=-0.025 Sum_probs=58.2
Q ss_pred ccCCceEEeeeecccCC--cceeeccccceeeccCcccccchh-------------hhhhcccccccccceeeeeccccc
Q psy9769 645 LVPGMKVIANICQQLPH--GWKAKLKNTQFKAFISPEAMSTAY-------------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 645 l~~G~~v~~~V~~v~~~--G~~v~~~~~~~~gfi~~~~~~~~~-------------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
-..|.+..|+|+++.++ |+||+++ .+-.||++.+++++.+ ++.++.||++ .++|+.....+|
T Consensus 43 ~~vGnIY~GkV~rv~p~~~aAFVdiG-~gk~gfLhisei~~~~~~~~~~~~~~~~i~d~lk~Gq~V--lVQV~Ke~~g~K 119 (517)
T 2bx2_L 43 QKKANIYKGKITRIEPSLEAAFVDYG-AERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEV--IVQIDKEERGNK 119 (517)
T ss_dssp CCTTCEEEEEEEEEETTTTEEEEESS-SSSCEEEEGGGSCGGGCC-------CCCGGGTCCTTCEE--EEEEEECCCTTC
T ss_pred CCCCCEEEEEEEEeccCCceEEEEeC-CCcEEEEEHHHcChhhhccccccccccchhhhccCCCEE--EEEEEeeccccC
Confidence 35799999999999999 9999994 7899999988886543 3458899999 999999888777
Q ss_pred eEEeechh
Q psy9769 710 HVYLSCNE 717 (1026)
Q Consensus 710 ~v~lS~k~ 717 (1026)
...||..-
T Consensus 120 Ga~lTt~i 127 (517)
T 2bx2_L 120 GAALTTFI 127 (517)
T ss_dssp CCEEESSC
T ss_pred CceEEeeE
Confidence 76666553
No 195
>2ckz_B C25, DNA-directed RNA polymerase III 25 KD polypeptide; multiprotein complex, nucleotidyltransferase, nuclear protein, hypothetical protein; 3.2A {Saccharomyces cerevisiae}
Probab=87.84 E-value=0.27 Score=49.32 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=47.7
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh------------------hhhhcccccccccceeeeeccc
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY------------------NAKYLTNKRVDLDCSVLYVCPR 707 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~------------------~~~~~~G~~~~~~~~Il~vd~~ 707 (1026)
..|++++|+|+++.+.|++|++. +.+.|+++.+++...+ ...|..|++| ++||..+|..
T Consensus 80 ~vGEv~~G~Is~Vt~fGifVeL~-g~~eglv~~s~l~~d~~~fd~~~~~~vg~~~e~t~~~~~~Gd~V--rvrV~~v~~~ 156 (218)
T 2ckz_B 80 FLGEIVTGWISKCTAEGIKVSLL-GIFDDIFIPQNMLFEGCYYTPEESAWIWPMDEETKLYFDVNEKI--RFRIEREVFV 156 (218)
T ss_dssp CTTCEEEEEEEEEETTEEEEECT-TSCCCEEEETTTSCTTCEEETTTTEEEEECC--CEEEECTTCEE--EEEEEEEEEC
T ss_pred CCCCEEEEEEEEEccCcEEEEcc-CccceEEEcHHHCCCCcEEcCcCceEEeeccccCCcEEcCCCEE--EEEEEEEEcc
Confidence 46999999999999999999993 5678887555543211 2348899999 9999999876
Q ss_pred cc
Q psy9769 708 HF 709 (1026)
Q Consensus 708 ~~ 709 (1026)
.+
T Consensus 157 ~~ 158 (218)
T 2ckz_B 157 DV 158 (218)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 196
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.83 E-value=4 Score=43.62 Aligned_cols=104 Identities=14% Similarity=0.245 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++..++.|+.+ ..+..||..+.+-.. .+...... .+++. -++.+++.|+.++.+.+||..+...... +..
T Consensus 175 dg~~lasg~~d----g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~ 246 (321)
T 3ow8_A 175 DGKYLASGAID----GIINIFDIATGKLLH--TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT--LSG 246 (321)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEE--EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE--ECC
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEE--EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE--EcC
Confidence 34556666654 358889988765332 11111111 12222 2577888999999999999987654321 111
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
.......+.+ ++..++.|+.+ ..+..||..+.+-
T Consensus 247 h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTC 282 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEE
Confidence 1111222223 56777778765 4688899877654
No 197
>2r7d_A Ribonuclease II family protein; structural genomics, PSI-2, structure initiative, northeast structural genomics consort NESG; 1.80A {Deinococcus radiodurans R1} SCOP: b.40.4.5 b.40.4.16 PDB: 2r7f_A
Probab=87.47 E-value=0.62 Score=52.79 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=43.2
Q ss_pred CCCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCCeeee
Q psy9769 947 TKPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 947 ~~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
-++|++..|.|+. +. +..|+|+.+++..+. .....|+.||.|+++|.+||..++.+
T Consensus 401 ~~~g~~f~g~vv~---------l~-~~~glV~v~~l~~d~--~~~~~~~lGd~V~V~v~~vd~~~~~i 456 (469)
T 2r7d_A 401 AQPERVWDAVVVD---------RR-GAQATLLIPDLAFDV--QVNTPAAPGTALQVQFADIDLPQMRV 456 (469)
T ss_dssp TCTTCCEEEEEEE---------EE-TTEEEEEEGGGTEEE--EEECCCCTTCEEEEEEEEEETTTTEE
T ss_pred hCCCCEEEEEEEE---------Ee-CcEEEEEECCCCeEE--ecCCcCCCCCEEEEEEEEEccCCCEE
Confidence 3569989888754 33 458999999997652 23457999999999999999987665
No 198
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.45 E-value=5.1 Score=42.78 Aligned_cols=106 Identities=12% Similarity=0.199 Sum_probs=60.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~ 396 (1026)
++..++.|+.+ ..+..||..+..-...-.... ..-.+++. -+++.++.|+.++.+.+||..+.+-.. +..-..
T Consensus 133 dg~~l~~g~~d----g~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~ 207 (321)
T 3ow8_A 133 DSQYLATGTHV----GKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 207 (321)
T ss_dssp TSSEEEEECTT----SEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCEEEEEcCC----CcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC
Confidence 44566666643 467888887665332111111 11112222 257788889999999999998876432 221111
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
+ . .+++. -++++++.|+.+ ..+..||..+....
T Consensus 208 ~-v-~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 208 P-I-RSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLA 241 (321)
T ss_dssp C-C-CEEEECTTSCEEEEECTT-----SCEEEEETTTCCEE
T ss_pred c-e-eEEEEcCCCCEEEEEcCC-----CeEEEEECCCccee
Confidence 1 1 12222 267777888765 45888998776543
No 199
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.38 E-value=2.3 Score=45.36 Aligned_cols=110 Identities=15% Similarity=0.286 Sum_probs=62.0
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.|+.+ ..+..||..+.....+..+...... .+++.. ++.+++.|+.++.+.+||+.+..|.....+.
T Consensus 25 g~~lasgs~D----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 100 (316)
T 3bg1_A 25 GTRLATCSSD----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA 100 (316)
T ss_dssp GCEEEEEETT----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC
T ss_pred CCEEEEEeCC----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc
Confidence 4456666644 3678888776654333322211111 222322 2678888999999999999988775433222
Q ss_pred CCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCCC-cEEEc
Q psy9769 396 ARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPSTE-KWNMI 438 (1026)
Q Consensus 396 ~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~ 438 (1026)
.......++.+ + +.+++.|+.+ ..+..||..+. .|...
T Consensus 101 ~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 101 GHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp CCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEEC
T ss_pred CCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCccee
Confidence 11111112222 2 5677777765 35777887665 57543
No 200
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=87.21 E-value=9.1 Score=40.52 Aligned_cols=157 Identities=13% Similarity=0.065 Sum_probs=82.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCC-CcEEEcC----CCCccccceeeEEE-C-CEEEEEeccCCCeEEEeCC--CCeEE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKT-ERWQSVA----EMPTRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPS--TNEWS 389 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~-~~W~~~~----~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~--~~~W~ 389 (1026)
++.+|+.+..+ ..+..||..+ .++.... ..+....-..++.. + ..+|+.+..++.+.+||.. +.++.
T Consensus 140 g~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 140 NRTLWVPALKQ----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp SSEEEEEEGGG----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred CCEEEEecCCC----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 34677765222 4688999887 6665332 11111111122222 3 3688888778889999884 34443
Q ss_pred e---CCCCcCC---cceeEEEEE--CC-EEEEEeccCCCCCCCEEEEEECC--CCcEEEccCCCCCcceeEEEEE--CCE
Q psy9769 390 S---APPMEAR---RSTLGVAVL--NS-LIYAVGGFDGSSGLNSAEVYDPS--TEKWNMIAPMSTRRSSVGVGVL--NGC 456 (1026)
Q Consensus 390 ~---~~~~p~~---r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~--~~~ 456 (1026)
. ...++.. ........+ ++ .||+.+..+ ..+..||+. +++++.+...+......+++.. +..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 290 (343)
T 1ri6_A 216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKY 290 (343)
T ss_dssp EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSE
T ss_pred EEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCE
Confidence 2 2222221 112222333 34 677665432 578888877 6677766544432222223332 345
Q ss_pred EEEEeC-CCceeeE--EcCcccEEEeecCCC
Q psy9769 457 LYAENL-DGRILGC--VKEITDWGLIIELPN 484 (1026)
Q Consensus 457 lyv~GG-~~~~~~~--~~~~~~W~~~~~lP~ 484 (1026)
||+.++ .+.+..| +..+.+|..+..+|.
T Consensus 291 l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 291 LIAAGQKSHHISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp EEEECTTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred EEEecCCCCeEEEEEEcCCCceeeEcccccc
Confidence 777764 3444444 555677877766654
No 201
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=87.15 E-value=8 Score=45.44 Aligned_cols=122 Identities=17% Similarity=0.242 Sum_probs=72.5
Q ss_pred CCCccCCcEEEEEcCCCCCCCcEEEEEEC-CCC--cEEEcCCCCc-----ccc---ceeeEE--ECCE----EEEEeccC
Q psy9769 313 RQPLRVPKVMLVVGGQAPKAIRSVECYDF-KTE--RWQSVAEMPT-----RRC---RAGLVF--LHEK----VYAVGGFN 375 (1026)
Q Consensus 313 ~~~~~~~~~i~v~GG~~~~~~~~~~~yd~-~~~--~W~~~~~~p~-----~r~---~~~~~~--~~~~----iyv~GG~~ 375 (1026)
..++..++.+|+.+.. ...++++|. .+. .|+.-...+. .++ ..+.++ .++. ||+. ..+
T Consensus 56 ~tP~v~~g~vyv~~~~----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~-t~d 130 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT-QLD 130 (599)
T ss_dssp SCCEEETTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE-CTT
T ss_pred eccEEECCEEEEEeCC----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE-cCC
Confidence 3445568889988652 246899999 665 4887543322 111 123455 5777 8774 456
Q ss_pred CCeEEEeCCCCe--EEeCCCCcCC--cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEcc
Q psy9769 376 GSLRVYDPSTNE--WSSAPPMEAR--RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIA 439 (1026)
Q Consensus 376 ~~~~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 439 (1026)
+.++.+|..|.+ |+.-..-+.. ....+-++.++.+|+-.+.........+..||+.+++ |+.-.
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 789999998875 8753221111 1122334578988874432111123689999998876 87543
No 202
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=86.98 E-value=3.6 Score=43.44 Aligned_cols=103 Identities=12% Similarity=0.239 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+..++.|+.+ ..+..||..+.+....-. ..... .+++. -++..++.|+.++.+.+||..+.+-... +...
T Consensus 35 ~~~l~s~~~d----g~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~ 106 (312)
T 4ery_A 35 GEWLASSSAD----KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGH 106 (312)
T ss_dssp SSEEEEEETT----SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EECC
T ss_pred CCEEEEeeCC----CeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE--EcCC
Confidence 4456666644 357788887776654321 11111 12222 2567888899999999999987653221 1111
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
.....++.+ ++.+++.|+.+ ..+..||+.+++-
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~ 141 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKC 141 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEE
Confidence 111122222 56677777765 4588999887654
No 203
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=86.92 E-value=8.7 Score=43.11 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=74.7
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcce
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRST 400 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~ 400 (1026)
..++.|+.+ ..+..||..+.+-. ..+............++..++.|+.++.+.+||+.+..-..... ......
T Consensus 323 ~~l~sg~~d----g~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~ 395 (464)
T 3v7d_B 323 KRCISASMD----TTIRIWDLENGELM--YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSA 395 (464)
T ss_dssp TEEEEEETT----SCEEEEETTTTEEE--EEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCC
T ss_pred CEEEEEeCC----CcEEEEECCCCcEE--EEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCcc
Confidence 345555543 35888998776432 22222222334445567788889999999999998765322111 111222
Q ss_pred eEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCC
Q psy9769 401 LGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDG 464 (1026)
Q Consensus 401 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~ 464 (1026)
..+...++.+.+.|+ + ..+..||..+++-......+....-.+++..++.+++.++.+
T Consensus 396 ~~~~~~~~~~l~~~~-d-----g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~ 453 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS-E-----NQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKD 453 (464)
T ss_dssp EEEEEECSSEEEEEE-T-----TEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEET
T ss_pred EEEEEeCCCEEEEec-C-----CeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeC
Confidence 334455777777776 3 479999998887654322232222233334466666666543
No 204
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=86.92 E-value=7.3 Score=42.16 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=67.7
Q ss_pred cEEEEEECCCCcEEEcCCCCccccc-eeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--C
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCR-AGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--N 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 407 (1026)
..+..||..+.+.... +...... .++... ++..++.|+.++.+.+||..+.+....-.... ....++.+ +
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~ 251 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHE--SDVNSVRYYPS 251 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECTT
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--CCeEEEEEeCC
Confidence 4688899887664321 1111111 111111 35788889999999999998876533211111 11222333 5
Q ss_pred CEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCC-ceeeEE
Q psy9769 408 SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDG-RILGCV 470 (1026)
Q Consensus 408 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~-~~~~~~ 470 (1026)
+..++.|+.+ ..+..||+.++.-...-...........+.+ ++++.+.|+.+ .+.-++
T Consensus 252 ~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 252 GDAFASGSDD-----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp SSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 6777888865 4688899887653322221222222233333 56666666543 344443
No 205
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=86.92 E-value=3.3 Score=46.14 Aligned_cols=103 Identities=12% Similarity=0.206 Sum_probs=59.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+..||..+...... +...... .+++. -++.+++.||.++.+.+||..+..-.. .+...
T Consensus 120 ~~~l~s~s~D----g~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~--~~~~h 191 (410)
T 1vyh_C 120 FSVMVSASED----ATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR--TMHGH 191 (410)
T ss_dssp SSEEEEEESS----SCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE--CCCCC
T ss_pred CCEEEEEeCC----CeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE--EEcCC
Confidence 4566677654 3688889877653221 1111111 12222 256788899999999999997754322 22211
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
.....++.+ ++..++.||.+ ..+..||..++..
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYC 226 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCE
T ss_pred CCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 112222333 56677777765 5788999987764
No 206
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=86.39 E-value=4.3 Score=45.53 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=67.9
Q ss_pred EEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEe
Q psy9769 335 SVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVG 414 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 414 (1026)
.+..||..+.+-. ..+............++..++.|+.++.+.+||..+.+-... +........+...++..++.|
T Consensus 260 ~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~ 335 (445)
T 2ovr_B 260 MVKVWDPETETCL--HTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSG 335 (445)
T ss_dssp CEEEEEGGGTEEE--EEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEE
T ss_pred EEEEEECCCCcEe--EEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEE
Confidence 4666776554322 122211222233344777788888999999999987653221 111111223334456666777
Q ss_pred ccCCCCCCCEEEEEECCCCcEEEccCCC-CCcceeEEEEECCEEEEEeCC-CceeeEEcCc
Q psy9769 415 GFDGSSGLNSAEVYDPSTEKWNMIAPMS-TRRSSVGVGVLNGCLYAENLD-GRILGCVKEI 473 (1026)
Q Consensus 415 G~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~-~~~~~~~~~~ 473 (1026)
+.+ ..+..||+.+++-...-..+ .......++..++.+++.|+. +.+.-++..+
T Consensus 336 ~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 336 NAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp ETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred eCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 755 46889998776543221111 122223334446666666664 4444454443
No 207
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.36 E-value=17 Score=39.32 Aligned_cols=140 Identities=12% Similarity=0.059 Sum_probs=77.5
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCC-ccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMP-TRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
.+++.|+.+ ..+..||..+.......... ....-.+++.. ++.+++.|+.++.+.+||..+............
T Consensus 87 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 162 (383)
T 3ei3_B 87 TTVAVGSKG----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSW 162 (383)
T ss_dssp TEEEEEEBT----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCS
T ss_pred CEEEEEcCC----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCC
Confidence 466666643 36889999887766543321 22222333333 457888899999999999998776655432211
Q ss_pred cc-eeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCE-EEEEeCCC-ceeeEEc
Q psy9769 398 RS-TLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGC-LYAENLDG-RILGCVK 471 (1026)
Q Consensus 398 r~-~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~-~~~~~~~ 471 (1026)
.. -.+++. -++..++.|+.+ ..+..||+....-..+..- ......+.+ ++. +++.|+.+ .+.-++.
T Consensus 163 ~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 163 DYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp SCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred CCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 11 122222 256777777765 5788999865443333221 111222222 343 66666544 4444444
Q ss_pred C
Q psy9769 472 E 472 (1026)
Q Consensus 472 ~ 472 (1026)
.
T Consensus 235 ~ 235 (383)
T 3ei3_B 235 R 235 (383)
T ss_dssp G
T ss_pred C
Confidence 3
No 208
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.36 E-value=12 Score=41.15 Aligned_cols=148 Identities=13% Similarity=0.040 Sum_probs=77.5
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCC-CCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeC--CCCcC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAE-MPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSA--PPMEA 396 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~--~~~p~ 396 (1026)
.+++.|+.+ ..+..||..+.+....-. ......-.+++.. ++..++.|+.++.+.+||+.+.+-... .....
T Consensus 145 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 145 NVLLSAGCD----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TEEEEEETT----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CEEEEEcCC----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence 466666654 358889998876543211 1111111222222 577888899999999999988764322 11111
Q ss_pred CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE-EEccCCCCCcceeEEEEE--CCEEEEEeC-CCceeeEEcC
Q psy9769 397 RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW-NMIAPMSTRRSSVGVGVL--NGCLYAENL-DGRILGCVKE 472 (1026)
Q Consensus 397 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~lyv~GG-~~~~~~~~~~ 472 (1026)
.+....+..-++++++.|.... ....+..||+.+..- .....+.....-.+++.. +..+|+.|+ .+.+.-|+..
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred CcceEEEEcCCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 2222222334778777773211 126789999876442 111111222222233333 456777775 5556555554
Q ss_pred cc
Q psy9769 473 IT 474 (1026)
Q Consensus 473 ~~ 474 (1026)
..
T Consensus 299 ~~ 300 (402)
T 2aq5_A 299 SE 300 (402)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 209
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=86.30 E-value=8.4 Score=40.62 Aligned_cols=140 Identities=9% Similarity=0.065 Sum_probs=73.8
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
+..++.|+.+ ..+..||..+.+....-...... -.+++.. ++..++.|+.++.+.+||..+.+-...-..+ .
T Consensus 153 ~~~l~~~~~d----g~v~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~ 225 (337)
T 1gxr_A 153 SKVCFSCCSD----GNIAVWDLHNQTLVRQFQGHTDG-ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--S 225 (337)
T ss_dssp SSEEEEEETT----SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--S
T ss_pred CCEEEEEeCC----CcEEEEeCCCCceeeeeecccCc-eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--C
Confidence 3455556543 35888998876543321111111 1122222 5677788889999999999887643222222 1
Q ss_pred ceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeC-CCceeeEEcCc
Q psy9769 399 STLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENL-DGRILGCVKEI 473 (1026)
Q Consensus 399 ~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~ 473 (1026)
.-.+++. -++..+++|+.+ ..+..||..+..-..+.....+ -.+++.. ++++++.|+ .+.+.-++..+
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLHLHESC--VLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEcCCccc--eeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 1222222 266777777754 4588999887654333222111 1122222 455555555 44455555444
No 210
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.28 E-value=12 Score=39.85 Aligned_cols=154 Identities=14% Similarity=0.245 Sum_probs=79.0
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCC--CcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKT--ERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.|+.+ ..+..||... ..+..+..+.........+.+ ++.+++.|+.++.+.+||..+..|..+..+.
T Consensus 119 g~~las~s~D----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~ 194 (330)
T 2hes_X 119 GYYLATCSRD----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN 194 (330)
T ss_dssp SCEEEEEETT----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeCC----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc
Confidence 4556666654 3577888742 344443332222122222222 5678888999999999998888776554332
Q ss_pred CCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCC------CcEEEccCCCC--CcceeEEEEECCEEEEEeC-
Q psy9769 396 ARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPST------EKWNMIAPMST--RRSSVGVGVLNGCLYAENL- 462 (1026)
Q Consensus 396 ~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~lyv~GG- 462 (1026)
.....-.++.+ + +..++.|+.+ ..+..||+.+ ..|.....++. ...-.+++...+.+++.||
T Consensus 195 ~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~ 269 (330)
T 2hes_X 195 GHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGA 269 (330)
T ss_dssp CCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEET
T ss_pred CCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeC
Confidence 11111122222 2 4456667655 3455665532 24665544442 2222223333344445554
Q ss_pred CCceeeEEcCcccEEEeecC
Q psy9769 463 DGRILGCVKEITDWGLIIEL 482 (1026)
Q Consensus 463 ~~~~~~~~~~~~~W~~~~~l 482 (1026)
.+.+.-++.....|......
T Consensus 270 dg~v~iw~~~~~~~~~~~~~ 289 (330)
T 2hes_X 270 DGVLAVYEEVDGEWKVFAKR 289 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEcCCCceEEEecc
Confidence 45555555555667665443
No 211
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=86.15 E-value=2.2 Score=47.93 Aligned_cols=141 Identities=12% Similarity=0.124 Sum_probs=75.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeC-CCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSA-PPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~-~~~p~~ 397 (1026)
++.+++.|+.+ ..+..||..+.+.... +.........+..++..++.|+.++.+.+||..+..-... ..+...
T Consensus 182 ~~~~l~sg~~d----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 182 DERVIITGSSD----STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp CSSEEEEEETT----SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC
Confidence 55566777654 3688899887754322 2222222333444566778899999999999987542110 111111
Q ss_pred cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeC-CCceeeEEcC
Q psy9769 398 RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENL-DGRILGCVKE 472 (1026)
Q Consensus 398 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG-~~~~~~~~~~ 472 (1026)
.....++..++..++.|+.+ ..+..||+.+.+-... +........++..++.+++.|+ .+.+.-+|..
T Consensus 256 ~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 256 RAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp SSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred CCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 12223334466667777754 5788999887654321 1111122233334555555555 4444444443
No 212
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=86.13 E-value=1.7 Score=48.81 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=61.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCC-ccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMP-TRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
..+++.|+.++ .+..||..+.......... ....=.+++.. ++.+++.|+.++.+.+||..++..........
T Consensus 132 ~~~lasGs~dg----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 207 (435)
T 4e54_B 132 PSTVAVGSKGG----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDT 207 (435)
T ss_dssp TTCEEEEETTS----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSS
T ss_pred CCEEEEEeCCC----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCC
Confidence 34667776543 5788888766543322211 11111233332 56777889999999999998877654432221
Q ss_pred Ccc-eeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 397 RRS-TLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 397 ~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
... ..++.. -++.+++.|+.+ ..+..||..+.
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~ 241 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGK 241 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSC
T ss_pred CCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcc
Confidence 111 122222 367788888765 46888998654
No 213
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=85.71 E-value=8.1 Score=43.11 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
++..++.|+.+ ..+..||..+.+-... ++.......+...++.+++.|+.++.+.+||..+.+.... +....
T Consensus 142 d~~~l~~g~~d----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~ 213 (435)
T 1p22_A 142 DDQKIVSGLRD----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNT--LIHHC 213 (435)
T ss_dssp CSSEEEEEESS----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEE--ECCCC
T ss_pred CCCEEEEEeCC----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEE--EcCCC
Confidence 45566777654 3688899877654322 2222222334444888889999999999999988764321 11112
Q ss_pred ceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 399 STLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 399 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
....+..+++..++.|+.+ ..+..||..+..
T Consensus 214 ~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~ 244 (435)
T 1p22_A 214 EAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPT 244 (435)
T ss_dssp SCEEEEECCTTEEEEEETT-----SCEEEEECSSSS
T ss_pred CcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCC
Confidence 2233344456677777765 468889987654
No 214
>2wp8_J Exosome complex exonuclease DIS3; nucleus, hydrolase, RNA-binding, exonucle binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae}
Probab=85.68 E-value=0.38 Score=59.49 Aligned_cols=67 Identities=9% Similarity=0.051 Sum_probs=56.1
Q ss_pred CceEEeeeecccCCcceeeccccceeeccCccccc--chh-------------------hhhhcccccccccceeeeecc
Q psy9769 648 GMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMS--TAY-------------------NAKYLTNKRVDLDCSVLYVCP 706 (1026)
Q Consensus 648 G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~--~~~-------------------~~~~~~G~~~~~~~~Il~vd~ 706 (1026)
|...+|.|.++.++|++|.+...|+.|+++.+.++ ..+ ...|++|++| +++|+.+|.
T Consensus 887 ge~~~g~V~~V~~~G~fV~L~~~giEGlVhis~L~~~~d~y~fde~~~~L~g~~~~g~~~~~~~lGD~V--~VkV~~vd~ 964 (977)
T 2wp8_J 887 ESTETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFVPTNSDKPRDVYVFDKV--EVQVRSVMD 964 (977)
T ss_dssp TCEEEEEEEEECSSEEEEECTTTCCEEEEEGGGTCSCGGGCEEETTTTEEEECCTTCCSCEEEETTCEE--EEEECCCCC
T ss_pred ceEEEEEEEEEcCCeEEEEEcCCCeEEEEEeccccCCCceeEEcccccEEEeecCCCccCcEEccCCEE--EEEEEEEcC
Confidence 88999999999999999999544899999888875 221 2569999999 999999997
Q ss_pred c---cceEEeech
Q psy9769 707 R---HFHVYLSCN 716 (1026)
Q Consensus 707 ~---~~~v~lS~k 716 (1026)
. ++++.||+|
T Consensus 965 ~~~~~~kI~Lslk 977 (977)
T 2wp8_J 965 PITSKRKAELLLK 977 (977)
T ss_dssp SSSCCCCCCEEEC
T ss_pred cccCCCceEEEeC
Confidence 4 378998875
No 215
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.59 E-value=6.8 Score=41.98 Aligned_cols=140 Identities=11% Similarity=0.145 Sum_probs=78.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccce-eeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRA-GLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+..||..+........+....... +++.. ++..++.|+.++.+.+||..+.+........
T Consensus 54 g~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-- 127 (368)
T 3mmy_A 54 GNFLIAGSWA----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHD-- 127 (368)
T ss_dssp SEEEEEEETT----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--
T ss_pred ceEEEEECCC----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecccc--
Confidence 3667777654 36788888763333211111111111 22222 5677778889999999999988765533211
Q ss_pred cceeEEEE---ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcC
Q psy9769 398 RSTLGVAV---LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 398 r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 472 (1026)
..-.+++. -++.+++.|+.+ ..+..||+.+++-... +..+....+.....+.+++.++.+...-|+..
T Consensus 128 ~~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 128 APVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMMV--LQLPERCYCADVIYPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp SCEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSEE--EECSSCEEEEEEETTEEEEEEGGGCEEEEECS
T ss_pred CceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEEE--EecCCCceEEEecCCeeEEEeCCCcEEEEEec
Confidence 11222222 267778888765 4688999876642211 11222333445556777766666655555543
No 216
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.39 E-value=3.7 Score=43.92 Aligned_cols=150 Identities=14% Similarity=0.146 Sum_probs=76.3
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
.++.+|+.++.+ ..++.+|+.+.+....-+.+.....+.++.. ++ .+|+.+..++.+++||+.+.+....-+.+
T Consensus 9 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 9 AGHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp TTCEEEEEEETT----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred CCCEEEEEeCCC----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 456788877643 5799999998876533223321012233333 34 68888877889999999987754321111
Q ss_pred C-----CcceeEEEEE-CC-EEEEEecc---CCC---CCCCEEEEEECCCCcEEE-ccCCCCCcceeEEEE-ECCEEEEE
Q psy9769 396 A-----RRSTLGVAVL-NS-LIYAVGGF---DGS---SGLNSAEVYDPSTEKWNM-IAPMSTRRSSVGVGV-LNGCLYAE 460 (1026)
Q Consensus 396 ~-----~r~~~~~~~~-~~-~iyv~GG~---~~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~ 460 (1026)
. ...-.+++.. +| .+|+.+.. ... .....+..||+.+++-.. +...+.++.-.+++. -++++|+.
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~ 164 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA 164 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEc
Confidence 1 1111222222 44 55555421 000 012589999987743211 111122222222322 26678875
Q ss_pred eCCCceeeEEcCc
Q psy9769 461 NLDGRILGCVKEI 473 (1026)
Q Consensus 461 GG~~~~~~~~~~~ 473 (1026)
++. +..++..+
T Consensus 165 ~~~--i~~~d~~~ 175 (349)
T 1jmx_B 165 GPD--IYKMDVKT 175 (349)
T ss_dssp SSS--EEEECTTT
T ss_pred cCc--EEEEeCCC
Confidence 443 55555444
No 217
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=85.29 E-value=9.6 Score=42.60 Aligned_cols=107 Identities=13% Similarity=0.222 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~~ 397 (1026)
++..++.|+.+ ..+..||..+.+-.. .+............++..++.|+.++.+.+||..+.+-.. +......
T Consensus 288 ~~~~l~~~~~d----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 361 (445)
T 2ovr_B 288 DGIHVVSGSLD----TSIRVWDVETGNCIH--TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH 361 (445)
T ss_dssp CSSEEEEEETT----SCEEEEETTTCCEEE--EECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC
T ss_pred CCCEEEEEeCC----CeEEEEECCCCCEEE--EEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC
Confidence 34445555543 357888887765332 1111122223334456677888999999999998765322 2211112
Q ss_pred cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 398 RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 398 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.....+...++..++.|+.+ ..+..||..+++..
T Consensus 362 ~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 362 QSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFI 395 (445)
T ss_dssp SSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCcee
Confidence 22233445577777888765 57899999887754
No 218
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=85.27 E-value=3.6 Score=43.78 Aligned_cols=132 Identities=12% Similarity=0.064 Sum_probs=73.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCCCeEEEeCCCCeE--EeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNGSLRVYDPSTNEW--SSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~yd~~~~~W--~~~~~~ 394 (1026)
.+.+|+.++.+ ..+..||+.+.+....-..+. ...+++.. ++ .+|+.+..++.+++||+.+.+. ..+...
T Consensus 9 ~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 9 SNFGIVVEQHL----RRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp CCEEEEEEGGG----TEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred CCEEEEEecCC----CeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 35677776533 489999999988865433332 12223332 34 6888887788999999988764 222222
Q ss_pred cCCcceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEEeCC
Q psy9769 395 EARRSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAENLD 463 (1026)
Q Consensus 395 p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~ 463 (1026)
..++ ++++.. ++ .+| .+... .....+..||+.+++....-+ .....++++.. ++ .+|+.+..
T Consensus 83 ~~~~--~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 83 QSSM--ADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SSCC--CCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEET
T ss_pred CCCc--cceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecC
Confidence 2222 212222 34 566 33221 112389999998887644322 22222344443 44 58887643
No 219
>1jjg_A M156R; beta barrel, S1 motif, OB fold, MYXV156R, NESG project, structural genomics, EIF-2A homolog, PSI, protein structure initiative; NMR {Myxoma virus} SCOP: b.40.4.5
Probab=85.26 E-value=5 Score=32.84 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=46.4
Q ss_pred ccccCCCCcEEEEEEEEEecceEEEEeCC--CceeeEeccccC--cccccCcccccccCCEEEEEEEEEeCC
Q psy9769 943 SVKHTKPGRLVWGVLKEKMPGGVRVEFDG--DISGVFPTSAMS--QATRTLVYTRFVIDTVIVCQILKYEDG 1010 (1026)
Q Consensus 943 ~~~~~~~G~~v~G~V~~i~~~G~fV~~~~--~i~Gl~~~~~ls--~~~~~~~~~~~~~G~~V~~~Vl~vd~~ 1010 (1026)
+--|+.||++..|.| -+.++-..|.+.+ |.++++-- .++ .+..++.++.+ +|-+|+++|+.+|.-
T Consensus 26 ~~~~~~~g~VtkGiV-y~kd~~fyV~L~dY~glEaii~d-Yvnv~~dr~~klkkkL-VGKtIkVqVIRvD~l 94 (102)
T 1jjg_A 26 SAMDLSPGSVHEGIV-YFKDGIFKVRLLGYEGHECILLD-YLNYRQDTLDRLKERL-VGRVIKTRVVRADGL 94 (102)
T ss_dssp CCCCCCSSCEEEEEE-EEETTEEEEECTTTSSCEEEECT-TCCSSCCCCCHHHHHH-TTCEEEEEEEEECSS
T ss_pred eccccCCCceEeeEE-EEeCCEEEEEecCCCCceeeeeh-hhhhhHHHHHHHHHHh-cCceEEEEEEEeccE
Confidence 345778899999987 6788888999975 78988752 222 13333333322 899999999999864
No 220
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.86 E-value=18 Score=38.67 Aligned_cols=131 Identities=15% Similarity=0.207 Sum_probs=75.6
Q ss_pred CCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCC-CcCCc-ceeEEEEECCEEEEEeccCCC
Q psy9769 343 TERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPP-MEARR-STLGVAVLNSLIYAVGGFDGS 419 (1026)
Q Consensus 343 ~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~-~p~~r-~~~~~~~~~~~iyv~GG~~~~ 419 (1026)
..+|+.+.. |....-.++... .+.+|++| ..+.++...-.-.+|+.+.. .+.+. ...+++..++.+|++|..
T Consensus 24 g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G-~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~--- 98 (327)
T 2xbg_A 24 YNPWEAIQL-PTTATILDMSFIDRHHGWLVG-VNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP--- 98 (327)
T ss_dssp SCCEEEEEC-SCSSCEEEEEESSSSCEEEEE-TTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET---
T ss_pred CCCceEeec-CCCCcEEEEEECCCCcEEEEc-CCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC---
Confidence 467988752 333333333333 46788865 45555555444568998753 22222 223444457889987532
Q ss_pred CCCCEEEEEECCCCcEEEccCCC-CCcceeEEEE-ECCEEEEEeCCCceeeEEcCcccEEEeec
Q psy9769 420 SGLNSAEVYDPSTEKWNMIAPMS-TRRSSVGVGV-LNGCLYAENLDGRILGCVKEITDWGLIIE 481 (1026)
Q Consensus 420 ~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~W~~~~~ 481 (1026)
..+++-+-...+|+.+...+ .+-....++. -++++|+.|..+.++.-.+...+|..+..
T Consensus 99 ---g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 99 ---PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp ---TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEEC
T ss_pred ---CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeec
Confidence 24555433467899887432 2222233333 47899999877766666666788998854
No 221
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.76 E-value=12 Score=41.81 Aligned_cols=133 Identities=5% Similarity=-0.068 Sum_probs=70.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEE--cCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCC---
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQS--VAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPM--- 394 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~--- 394 (1026)
+.+++.|+.+ ..+..||..+..... +.....+ ....+.. ++..++.||.++.+.+||..+.+....-+.
T Consensus 210 ~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 283 (450)
T 2vdu_B 210 HQFIITSDRD----EHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSL 283 (450)
T ss_dssp CEEEEEEETT----SCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHH
T ss_pred CcEEEEEcCC----CcEEEEECCCCceeeeeecCCCCc-eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhh
Confidence 5566777654 367888877665332 1111111 1111222 778888899999999999988764321110
Q ss_pred ---------------------cCCcceeEEEEE-CCEEEEEec-cCCCCCCCEEEEEEC--C-CCcEEEccCCCCCccee
Q psy9769 395 ---------------------EARRSTLGVAVL-NSLIYAVGG-FDGSSGLNSAEVYDP--S-TEKWNMIAPMSTRRSSV 448 (1026)
Q Consensus 395 ---------------------p~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~yd~--~-~~~W~~~~~~p~~r~~~ 448 (1026)
+....-.+++.. +++.+++|+ .+ ..+..||. . .+++..+..++....-.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d-----~~i~iw~~~~~~~~~l~~~~~~~~~~~v~ 358 (450)
T 2vdu_B 284 IKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT-----KCIIILEMSEKQKGDLALKQIITFPYNVI 358 (450)
T ss_dssp HGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC-----SEEEEEEECSSSTTCEEEEEEEECSSCEE
T ss_pred hhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC-----CeEEEEEeccCCCCceeeccEeccCCceE
Confidence 001111122222 344444443 32 57888887 3 34566555444333334
Q ss_pred EEEEECCEEEEEeCC
Q psy9769 449 GVGVLNGCLYAENLD 463 (1026)
Q Consensus 449 ~~~~~~~~lyv~GG~ 463 (1026)
+++...+.+++..+.
T Consensus 359 ~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 359 SLSAHNDEFQVTLDN 373 (450)
T ss_dssp EEEEETTEEEEEECC
T ss_pred EEEecCCcEEEEEec
Confidence 555566778777653
No 222
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=84.73 E-value=3.8 Score=50.20 Aligned_cols=137 Identities=9% Similarity=0.008 Sum_probs=79.6
Q ss_pred EEEEEECCCCcEEEcCC---CCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC-CcceeEEEEE-CC
Q psy9769 335 SVECYDFKTERWQSVAE---MPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA-RRSTLGVAVL-NS 408 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~ 408 (1026)
-+.+||+.+.++....+ ++.. .-.+++.- +|.||+ |...+-+.+||+.+++++....... ...-.+.+.. ++
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~-~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSN-SVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNK 461 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCS-BEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTS
T ss_pred cEEEEECCCCeEEEccCCCCCCCc-ceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCC
Confidence 47889998877766531 1111 11223322 578887 5455568999999999987753211 1112223332 57
Q ss_pred EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC---CCcc-eeEEEE-ECCEEEEEeCCCceeeEEcCcccEEEee
Q psy9769 409 LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS---TRRS-SVGVGV-LNGCLYAENLDGRILGCVKEITDWGLII 480 (1026)
Q Consensus 409 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p---~~r~-~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~W~~~~ 480 (1026)
.||+... ..+.+||+.+++|......+ .+.. -.+++. -++.||+....+++..|+..+++|....
T Consensus 462 ~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 462 KIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp EEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred CEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 8887432 45889999999987665322 1111 112222 2678888654456777877777776653
No 223
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=84.64 E-value=20 Score=43.72 Aligned_cols=149 Identities=7% Similarity=0.083 Sum_probs=86.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc-ccc-ceeeE-EECCEEEEEeccCCCeEEEeCCCCeEEeCCC-C
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT-RRC-RAGLV-FLHEKVYAVGGFNGSLRVYDPSTNEWSSAPP-M 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~-~~~~~-~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~-~ 394 (1026)
++.|++... ..+.+||+.++++......+. +.. -.+++ .-+|.||+... +.+++||+.++++..... .
T Consensus 98 ~g~lWigT~------~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~~~~~~~~~ 169 (795)
T 4a2l_A 98 QGRVWIGTR------DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP--EGLIMFDIKESKFIDDSFST 169 (795)
T ss_dssp TSCEEEEES------SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET--TEEEEEETTTTEEECSSSCH
T ss_pred CCCEEEEeC------CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC--CceEEEECCCCEEEeccCCC
Confidence 346666432 358899999998887643211 111 11222 33788988543 558999999988876543 1
Q ss_pred cCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEE-EECCEEEEEeCCCceeeEEcC
Q psy9769 395 EARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVG-VLNGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 395 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~ 472 (1026)
+....-.+... -++.||+. ..+ ..+.+||+.++++......+....-.++. .-++.||+....+++..|+..
T Consensus 170 ~~~~~i~~i~~d~~g~lwig-t~~-----~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~ 243 (795)
T 4a2l_A 170 AMHKTIASTLYRQGDQIYIG-TST-----DGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPK 243 (795)
T ss_dssp HHHTCCEEEEEEETTEEEEE-ESS-----SCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETT
T ss_pred CCCcceEEEEECCCCCEEEE-ECC-----CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCC
Confidence 11110122222 48899983 211 24889999999998764332221122222 237888886544567888887
Q ss_pred cccEEEeec
Q psy9769 473 ITDWGLIIE 481 (1026)
Q Consensus 473 ~~~W~~~~~ 481 (1026)
+.++.....
T Consensus 244 ~~~~~~~~~ 252 (795)
T 4a2l_A 244 TKEIKNYLH 252 (795)
T ss_dssp TTEEEEECC
T ss_pred CCeEEEeec
Confidence 777766543
No 224
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=84.50 E-value=17 Score=39.93 Aligned_cols=104 Identities=13% Similarity=0.061 Sum_probs=58.3
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCE-EEEEeccCCCeEEEeCCCCeE--EeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEK-VYAVGGFNGSLRVYDPSTNEW--SSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~yd~~~~~W--~~~~~~ 394 (1026)
++..++.|+.+ ..+..||..+.+-...........-.+++.. ++. +++.|+.++.+.+||..+..- ..+..
T Consensus 258 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~- 332 (420)
T 3vl1_A 258 YGKYVIAGHVS----GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI- 332 (420)
T ss_dssp TTEEEEEEETT----SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-
T ss_pred CCCEEEEEcCC----CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-
Confidence 55666777654 3588899887653322111111111222222 344 788899999999999987532 11111
Q ss_pred cCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCC
Q psy9769 395 EARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 395 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
.....-.++...++.+++.||.+ ..+..||+..
T Consensus 333 ~~~~~v~~~~~~~~~~l~s~~~d-----~~v~iw~~~~ 365 (420)
T 3vl1_A 333 NEGTPINNVYFAAGALFVSSGFD-----TSIKLDIISD 365 (420)
T ss_dssp STTSCEEEEEEETTEEEEEETTT-----EEEEEEEECC
T ss_pred cCCCCceEEEeCCCCEEEEecCC-----ccEEEEeccC
Confidence 01112223344588888888865 4677787654
No 225
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=84.10 E-value=32 Score=35.92 Aligned_cols=106 Identities=9% Similarity=0.278 Sum_probs=58.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCC--CcEEEcCCCCccccce-eeEEE---CCEEEEEeccCCCeEEEeCCCC-------
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKT--ERWQSVAEMPTRRCRA-GLVFL---HEKVYAVGGFNGSLRVYDPSTN------- 386 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~-~~~~~---~~~iyv~GG~~~~~~~yd~~~~------- 386 (1026)
+.+++.|+.+ ..+..||..+ ..|.....+....... +++.. ++.+++.|+.++.+.+||..+.
T Consensus 23 ~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 98 (351)
T 3f3f_A 23 GRHVATCSSD----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR 98 (351)
T ss_dssp SSEEEEEETT----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC
T ss_pred CCEEEEeeCC----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc
Confidence 3455666643 3677777664 3444443332222222 23333 3778889999999999998764
Q ss_pred eEEeCCCCcCCcceeEEEEE--C--CEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 387 EWSSAPPMEARRSTLGVAVL--N--SLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 387 ~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.|..+..+.........+.+ + +.+++.|+.+ ..+..||+.+.+
T Consensus 99 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~ 145 (351)
T 3f3f_A 99 RWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPS 145 (351)
T ss_dssp SEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTT
T ss_pred CcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChH
Confidence 23333222222222222333 3 6677777755 478899987654
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=83.96 E-value=7.5 Score=46.58 Aligned_cols=121 Identities=20% Similarity=0.302 Sum_probs=75.0
Q ss_pred CCCccCCcEEEEEcCCCCCCCcEEEEEECCCCc--EEEcCCCCcc--------ccceeeEEECCEEEEEeccCCCeEEEe
Q psy9769 313 RQPLRVPKVMLVVGGQAPKAIRSVECYDFKTER--WQSVAEMPTR--------RCRAGLVFLHEKVYAVGGFNGSLRVYD 382 (1026)
Q Consensus 313 ~~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~yd 382 (1026)
..++..++.+|+... ...++++|..+.+ |+.-...+.. ....+.++.++.||+. ..++.++.+|
T Consensus 71 ~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~-~~dg~l~alD 144 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-----WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVG-AWDGRLIALD 144 (677)
T ss_dssp CCCEEETTEEEEECG-----GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEE-CTTSEEEEEE
T ss_pred eCCEEECCEEEEECC-----CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEE-cCCCEEEEEE
Confidence 334456888888764 2478999988764 8865433211 1223466778899875 4567899999
Q ss_pred CCCCe--EEeCCC-C-cC-CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEcc
Q psy9769 383 PSTNE--WSSAPP-M-EA-RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIA 439 (1026)
Q Consensus 383 ~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 439 (1026)
..|.+ |+.-.. - +. .....+.++.++.+|+..+.........+..||..+++ |+.-.
T Consensus 145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 98775 876432 1 11 11122334568998876543222224689999998876 87643
No 227
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=83.93 E-value=2.6 Score=45.32 Aligned_cols=140 Identities=18% Similarity=0.231 Sum_probs=73.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-C--CEEEEEeccCCCeEEEeCCCC------eEE
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-H--EKVYAVGGFNGSLRVYDPSTN------EWS 389 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~yd~~~~------~W~ 389 (1026)
+.+++.|+.+ ..+..||..+..|..+..+...... .+++.. + +...+.|+.++.+.+||..+. .|.
T Consensus 165 ~~~l~s~s~D----~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 165 EALLASSSYD----DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SSEEEEEETT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCEEEEEcCC----CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 4456666654 3577788777777665443322111 122222 2 456678888999999887542 455
Q ss_pred eCCCCcC--CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC--CCcceeEEEEE----CCEEEEEe
Q psy9769 390 SAPPMEA--RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS--TRRSSVGVGVL----NGCLYAEN 461 (1026)
Q Consensus 390 ~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~~~~~----~~~lyv~G 461 (1026)
....++. ...-.+++...+.+++.||.+ ..+..||..++.|....... .......++.. ++++.+.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGAD-----GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETT-----SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCC-----CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe
Confidence 4433332 222223333345566777755 46788888888886554322 11111222222 45677777
Q ss_pred CCCceee
Q psy9769 462 LDGRILG 468 (1026)
Q Consensus 462 G~~~~~~ 468 (1026)
|.++...
T Consensus 316 s~Dg~v~ 322 (330)
T 2hes_X 316 GDDGIVN 322 (330)
T ss_dssp ETTSEEE
T ss_pred cCCCcEE
Confidence 7554433
No 228
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=83.73 E-value=8.4 Score=42.38 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=72.3
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE-----cCCCCccccc-eeeEEE-CC-EEEEEeccCCCeEEEeCCCCeEEe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS-----VAEMPTRRCR-AGLVFL-HE-KVYAVGGFNGSLRVYDPSTNEWSS 390 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~-----~~~~p~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~yd~~~~~W~~ 390 (1026)
++.+++.|+.+ ..+..||..++.+.. +..+...... .+++.. ++ .+++.|+.++.+.+||..+.+...
T Consensus 93 ~~~~l~s~s~d----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 93 NDNVIASGSED----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL 168 (402)
T ss_dssp CTTEEEEEETT----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE
Confidence 34566666644 468889988764421 1111111111 222222 23 588889999999999999887543
Q ss_pred CCC-CcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEECCEEEEEe
Q psy9769 391 APP-MEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVLNGCLYAEN 461 (1026)
Q Consensus 391 ~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~lyv~G 461 (1026)
.-. ......-.+++.. ++..++.|+.+ ..+..||+.+++-...- .-...+....+..-++++++.|
T Consensus 169 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 169 TLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp EECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred EEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 211 1111112222222 67777777755 57999999887653321 1111112222223377888877
No 229
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.71 E-value=18 Score=39.77 Aligned_cols=153 Identities=12% Similarity=0.146 Sum_probs=85.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCC---Ccc--------------ccceeeEEE---CCEEEEEeccCCCe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEM---PTR--------------RCRAGLVFL---HEKVYAVGGFNGSL 378 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~---p~~--------------r~~~~~~~~---~~~iyv~GG~~~~~ 378 (1026)
++.+|+.+. ...+++.+-...+|+.+... |.. ..-+++++. .+.||+..+ .+.+
T Consensus 128 ~~~l~~g~~-----~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl 201 (394)
T 3b7f_A 128 PGTWYAGTS-----PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGV 201 (394)
T ss_dssp TTCEEEEEE-----TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEE
T ss_pred CCEEEEEec-----CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCE
Confidence 456666542 13578888888899987532 221 112334433 357887543 3347
Q ss_pred EEEeCCCCeEEeCCC------CcCC-----cceeEEEEEC---CEEEEEeccCCCCCCCEEEEEECCCCcEEEccC-CCC
Q psy9769 379 RVYDPSTNEWSSAPP------MEAR-----RSTLGVAVLN---SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP-MST 443 (1026)
Q Consensus 379 ~~yd~~~~~W~~~~~------~p~~-----r~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~ 443 (1026)
++.+-...+|+.+.. +|.+ ...++++... +.||+..+ ..+++++....+|+.+.. +|.
T Consensus 202 ~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 202 FESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp EEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECGGGGSCT
T ss_pred EEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceECCCCCCC
Confidence 777777889998753 1211 2234444432 67777432 458888888999998864 554
Q ss_pred C--cceeEEEEE---CCEEEEEe-------------CCCceeeEEcCcccEEEeec-CCC
Q psy9769 444 R--RSSVGVGVL---NGCLYAEN-------------LDGRILGCVKEITDWGLIIE-LPN 484 (1026)
Q Consensus 444 ~--r~~~~~~~~---~~~lyv~G-------------G~~~~~~~~~~~~~W~~~~~-lP~ 484 (1026)
. ....+++.. .+.||+.. +...++.-.+...+|..+.. +|.
T Consensus 275 ~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 275 EVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp TTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred CCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 2 233334332 46788873 11233332333478988753 554
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=83.39 E-value=41 Score=34.21 Aligned_cols=143 Identities=11% Similarity=0.091 Sum_probs=79.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEecc--CCCeEEEeCCCCeEEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGF--NGSLRVYDPSTNEWSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~--~~~~~~yd~~~~~W~~~~~~ 394 (1026)
++.+|+.-.. ...+.++|+....-..+.+.... .-..+++. ++.||+.... .+.++++++....-+.+...
T Consensus 90 ~~~lyv~d~~----~~~I~~~~~~g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 90 GRTIFWTDSQ----LDRIEVAKMDGTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp TTEEEEEETT----TTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred CCeEEEEECC----CCEEEEEEcCCCCEEEEEECCCC-CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 4677776532 35788888875443333221111 11234443 6899998754 45788888765432222211
Q ss_pred cCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEc-cCCCCCcceeEEEEECCEEEEEeC-CCceeeEE
Q psy9769 395 EARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI-APMSTRRSSVGVGVLNGCLYAENL-DGRILGCV 470 (1026)
Q Consensus 395 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~lyv~GG-~~~~~~~~ 470 (1026)
+. ..-.+++.- ++.||+.-.. .+.+.+||+.+..-..+ ..+..| .+++.-++.||+... .+.+..++
T Consensus 165 ~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 165 NL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp TC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTTTEEEEEE
T ss_pred CC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCCCeEEEEe
Confidence 11 122333443 5789998532 36899999976433222 222233 355566899999874 45677777
Q ss_pred cCccc
Q psy9769 471 KEITD 475 (1026)
Q Consensus 471 ~~~~~ 475 (1026)
..+.+
T Consensus 236 ~~~g~ 240 (267)
T 1npe_A 236 LAISK 240 (267)
T ss_dssp TTTTE
T ss_pred CCCCC
Confidence 65543
No 231
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=83.14 E-value=7.2 Score=42.15 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=64.5
Q ss_pred cEEEEEECCCCcEEEcCCCC---ccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--C
Q psy9769 334 RSVECYDFKTERWQSVAEMP---TRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--N 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 407 (1026)
..+..||..+++-....... ....-.+++. -++...+.|+.++.+.+||..+++-... +..-...-.++.+ +
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPH 180 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE--EcCcCCceEEEEecCC
Confidence 36888888766422111100 0001112222 2577888899999999999988764221 1111111122222 3
Q ss_pred C-EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE---CCEEEEEeCCCce
Q psy9769 408 S-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL---NGCLYAENLDGRI 466 (1026)
Q Consensus 408 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~ 466 (1026)
+ .+++.|+.+ ..+..||..+.+-...-..........++.. ++++++.|+.++.
T Consensus 181 ~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 181 KDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp CTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 3 577888766 4588999987764332221211112222222 4567777775443
No 232
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=82.97 E-value=5.9 Score=41.34 Aligned_cols=144 Identities=7% Similarity=-0.104 Sum_probs=78.1
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCccccceeeE-EECCEEEEEecc-CCCeEEEeCCCCe-EEeC-
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTRRCRAGLV-FLHEKVYAVGGF-NGSLRVYDPSTNE-WSSA- 391 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~-~~~~~~yd~~~~~-W~~~- 391 (1026)
.++.+++.+ .+.+.+||+ +. .|+.-.+ .....+++. ..+|.+++..+. ++.++.+|+..+. |+..
T Consensus 46 pdG~ilvs~------~~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~ 116 (276)
T 3no2_A 46 KAGEILFSY------SKGAKMITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEF 116 (276)
T ss_dssp TTSCEEEEC------BSEEEEECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEeC------CCCEEEECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEec
Confidence 456677743 246899999 44 3664332 111122333 346777776554 6678888885442 4431
Q ss_pred -CCC--cCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCC-cEEEccCCCCCcceeEEEEE-CCEEEEEeCCC-c
Q psy9769 392 -PPM--EARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTE-KWNMIAPMSTRRSSVGVGVL-NGCLYAENLDG-R 465 (1026)
Q Consensus 392 -~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~-~ 465 (1026)
... +...........+|.+++....+ ..+.+||+..+ .|+.-.+ .. .+++... ++.+++.+..+ +
T Consensus 117 ~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----~~v~~~d~~G~~~w~~~~~-~~---~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 117 ETGIERPHAQFRQINKNKKGNYLVPLFAT-----SEVREIAPNGQLLNSVKLS-GT---PFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp CCSCSSGGGSCSCCEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECS-SC---CCEEEECTTSCEEEECBTTSE
T ss_pred cCCCCcccccccCceECCCCCEEEEecCC-----CEEEEECCCCCEEEEEECC-CC---ccceeEcCCCCEEEEeCCCCe
Confidence 111 11111222334467777665422 57999999733 2765432 11 2233334 67888877654 5
Q ss_pred eeeEEcCccc--EEEe
Q psy9769 466 ILGCVKEITD--WGLI 479 (1026)
Q Consensus 466 ~~~~~~~~~~--W~~~ 479 (1026)
+..++..+.+ |+.-
T Consensus 188 v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 188 FVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEECTTTCCEEEEEE
T ss_pred EEEEeCcCCcEEEEec
Confidence 7778777433 8776
No 233
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.78 E-value=10 Score=40.59 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=58.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccce-eeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRA-GLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+++.|+.+ ..+..||..+.+-... +....... +++.. ++..++.|+.++.+.+||..+.+....-..+
T Consensus 43 ~~~~l~~~~~d----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 115 (369)
T 3zwl_B 43 EGDLLFSCSKD----SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSP- 115 (369)
T ss_dssp TSCEEEEEESS----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS-
T ss_pred CCCEEEEEeCC----CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC-
Confidence 34556666543 3688889877654322 22111122 22222 4677788899999999999887643322211
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
..-.+++. -++..++.++.+.......+..||+.+.
T Consensus 116 -~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 116 -VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp -SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred -CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 11122222 2566666666542223357778876543
No 234
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.68 E-value=12 Score=38.15 Aligned_cols=114 Identities=8% Similarity=-0.080 Sum_probs=62.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCCC--eEEEeCCCCeEEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNGS--LRVYDPSTNEWSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~--~~~yd~~~~~W~~~~~~ 394 (1026)
++..+++++........++.+|..+.....+..... ...++.. ++ .|++.++.++. ++.++..+.....+...
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 344445554333345689999988877666544322 1222222 33 56666666664 55566777776665543
Q ss_pred cCCcceeEEEE-ECCE-EEEEeccCCCCCCCEEEEEECCCCcEEEccC
Q psy9769 395 EARRSTLGVAV-LNSL-IYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 395 p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
+..- ...+. -+++ |++.+..++ ...++.+++.+.....+..
T Consensus 172 ~~~~--~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 172 EGRN--DGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp SSCE--EEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCC
T ss_pred CCcc--ccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEec
Confidence 3211 12222 2555 444443332 3678888887777776654
No 235
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=82.62 E-value=6.3 Score=41.97 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=56.7
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEE-ccCCC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM-IAPMS 442 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p 442 (1026)
+|.||+.+..++.+++||+.++++......+ ...-.+++. -++++|+.+..+. .....+++||+.++.... +....
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEEEccCc
Confidence 5789998888889999999988876543111 112223333 2678888754321 123579999998887653 33222
Q ss_pred CCcceeEEEEE-CCEEEEEeC
Q psy9769 443 TRRSSVGVGVL-NGCLYAENL 462 (1026)
Q Consensus 443 ~~r~~~~~~~~-~~~lyv~GG 462 (1026)
.......++.- ++++|+...
T Consensus 133 ~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 133 TAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEEC
T ss_pred cCCcccceEECCCCCEEEEec
Confidence 22222222222 678888754
No 236
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=82.44 E-value=11 Score=41.39 Aligned_cols=150 Identities=14% Similarity=0.148 Sum_probs=86.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCC--CcEEEcCCCCccccceeeEEE---CCEEEEEeccCC----CeEEEeCCCCeEE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKT--ERWQSVAEMPTRRCRAGLVFL---HEKVYAVGGFNG----SLRVYDPSTNEWS 389 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~----~~~~yd~~~~~W~ 389 (1026)
++.||+.. . .-++.|+... .+|+...+.+....-++++.. .+.||+.+. .+ .+++.+-...+|+
T Consensus 22 ~g~l~vgt-~-----~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~-~g~~g~gl~~s~D~G~tW~ 94 (394)
T 3b7f_A 22 PVMLLVAT-I-----KGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAAR-TGHLGPTVFRSDDGGGNWT 94 (394)
T ss_dssp CCEEEEEE-T-----TEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEE-C--CCEEEEEESSTTSCCE
T ss_pred CCEEEEEe-c-----CceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEec-CCCCCccEEEeCCCCCCce
Confidence 34666643 2 2477777654 789976432222223344443 468887653 33 5777777778999
Q ss_pred eCCCC---cCC--c-------ceeEEEEE----CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCC---CC-------
Q psy9769 390 SAPPM---EAR--R-------STLGVAVL----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPM---ST------- 443 (1026)
Q Consensus 390 ~~~~~---p~~--r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~------- 443 (1026)
.+... +.. + .-.+.+.. .+.||+.+. . ..+++.+-...+|+.+... |.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~-----ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~ 168 (394)
T 3b7f_A 95 EATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-P-----QGLFRSTDHGASWEPVAGFNDHPMRRAWTGG 168 (394)
T ss_dssp ECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-T-----TEEEEESSTTSBCEECHHHHTCTTHHHHHCC
T ss_pred ECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-C-----CcEEEEcCCCCCeEECcCccCCccccccccc
Confidence 87532 211 1 11123332 467877542 1 4688888888899987532 21
Q ss_pred -------CcceeEEEEE---CCEEEEEeCCCceeeEEcCcccEEEeec
Q psy9769 444 -------RRSSVGVGVL---NGCLYAENLDGRILGCVKEITDWGLIIE 481 (1026)
Q Consensus 444 -------~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~W~~~~~ 481 (1026)
....+++++. .+.||+..+.+.++...+...+|+.+..
T Consensus 169 ~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 169 EQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp C----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCT
T ss_pred cccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCC
Confidence 1112333332 3678887655667777777789988743
No 237
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.18 E-value=34 Score=38.08 Aligned_cols=107 Identities=7% Similarity=-0.034 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE--cCCCCccccc-ee-eEEEC---CEEEEEeccCCCeEEEeCCCCeEEe-
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS--VAEMPTRRCR-AG-LVFLH---EKVYAVGGFNGSLRVYDPSTNEWSS- 390 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~-~~-~~~~~---~~iyv~GG~~~~~~~yd~~~~~W~~- 390 (1026)
++..++.|+.+ ..++.|+..+..... ...+...... .+ +..-+ +.+++.|+.++.+.+||..+.+...
T Consensus 160 ~~~~l~~~~~~----g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 160 DDTTVIIADKF----GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp TSSEEEEEETT----SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred CCCEEEEEeCC----CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence 34455555432 467888876654321 1111111111 12 22335 7788899999999999988765332
Q ss_pred -CCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 391 -APPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 391 -~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
..... ......+.. ++++++.||.+ ..+..||..+++..
T Consensus 236 ~~~~h~-~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 236 WLFGHK-HFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp ECCCCS-SCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEE
T ss_pred eecCCC-CceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEe
Confidence 21111 111222223 77778888754 57889999887653
No 238
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=82.06 E-value=5.7 Score=43.14 Aligned_cols=105 Identities=11% Similarity=0.151 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
++..++.|+.+ ..+..||..+.+-... +...... .+++.. + +.+++.||.++.+.+||..+.+-.......
T Consensus 150 dg~~l~sgs~d----g~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 150 DGTQAVSGGKD----FSVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp SSSEEEEEETT----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 34556666654 3578899887654322 2111111 122222 2 357888999999999999876543322222
Q ss_pred CCcceeEEEEE---CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 396 ARRSTLGVAVL---NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 396 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.......++.+ ++.+++.|+.+ ..+..||+.+.+
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~ 260 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPD 260 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGG
T ss_pred cccccccchhhhhcccceEEEeecc-----cceeEEECCCCc
Confidence 22222233333 45688888765 458889987654
No 239
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=81.96 E-value=0.98 Score=47.58 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=65.0
Q ss_pred eechhhHHHHHHHHHhcCchhHHhHHHHhhhcccC------------CcchhhHHHhhhhcC---chhHHHHHHhhhhhh
Q psy9769 129 YVTEENVQMLLPAANLLQLTDVRDACCDFLQCQLH------------PTNCLGIRAFADLHS---CLDLLSTAENYIELH 193 (1026)
Q Consensus 129 ~i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~------------~~n~~~~~~~a~~~~---~~~L~~~~~~~i~~~ 193 (1026)
.++.+|+..++..|+.++++.|.+.|.+|+..++. .+....++.- +... -..+.+++..|+..+
T Consensus 138 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~-d~L~v~sE~~vf~av~~W~~~~ 216 (279)
T 3i3n_A 138 KLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSD-LEITVDSEEVLFETVLKWVQRN 216 (279)
T ss_dssp HCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTC-SSCCCSCHHHHHHHHHHHHHTT
T ss_pred cCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcC-cCCCCCCHHHHHHHHHHHHHcC
Confidence 37889999999999999999999999999987632 1111222211 1122 235777778887543
Q ss_pred -------hhheecccccccCCHhhHhceeccccc
Q psy9769 194 -------FAEIVECEEFLSLSHEQVLGLISSDKL 220 (1026)
Q Consensus 194 -------~~~l~~~~~f~~L~~~~l~~ll~~~~l 220 (1026)
+..+++.-+|..|+.+.|..++..+.+
T Consensus 217 ~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l 250 (279)
T 3i3n_A 217 AEERERYFEELFKLLRLSQMKPTYLTRHVKPERL 250 (279)
T ss_dssp HHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccch
Confidence 566778889999999999888776544
No 240
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.92 E-value=6.8 Score=41.52 Aligned_cols=150 Identities=7% Similarity=0.012 Sum_probs=74.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECC-CCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCCCeEEEeCC--CCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFK-TERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNGSLRVYDPS--TNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~yd~~--~~~W~~~~~ 393 (1026)
+..+|+.++.+ ..+..||.. +.++..+...+....-.+++.. ++ .+|+.+..++.+.+|+.. +.++..+..
T Consensus 4 ~~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 4 KQTVYIASPES----QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEEEGGG----TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEEeCCCC----CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 34677775432 467788774 4555554333322222223332 34 577665545788888776 777776544
Q ss_pred CcCCcceeEEEE-ECCE-EEEEeccCCCCCCCEEEEEECCCC-cEEEccCCCCCcceeEEEEE--CCEEEEEe-CCCcee
Q psy9769 394 MEARRSTLGVAV-LNSL-IYAVGGFDGSSGLNSAEVYDPSTE-KWNMIAPMSTRRSSVGVGVL--NGCLYAEN-LDGRIL 467 (1026)
Q Consensus 394 ~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~G-G~~~~~ 467 (1026)
++.+..-..++. -+++ +|+.+..+ ..+..||+..+ ....+...+......+++.. +..+|+.+ +.+.+.
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 80 SALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred cccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 332222222332 2444 66654322 46888887322 22222222222122223333 34688877 556666
Q ss_pred eEEcCc-ccEE
Q psy9769 468 GCVKEI-TDWG 477 (1026)
Q Consensus 468 ~~~~~~-~~W~ 477 (1026)
.|+... .++.
T Consensus 155 ~~d~~~~~~~~ 165 (343)
T 1ri6_A 155 LFTVSDDGHLV 165 (343)
T ss_dssp EEEECTTSCEE
T ss_pred EEEecCCCcee
Confidence 666544 4443
No 241
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.84 E-value=19 Score=43.58 Aligned_cols=138 Identities=10% Similarity=0.059 Sum_probs=77.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc-cccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCC--C
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT-RRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAP--P 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~--~ 393 (1026)
++.|+++||.. .-+.+||+.+++++.+..-.. ......+... +|.||+. .. +-+.+||+.++++.... .
T Consensus 482 ~g~lWi~~~t~----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~~~~~~~g 555 (758)
T 3ott_A 482 EGNVWVLLYNN----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FH-GGVMRINPKDESQQSISFGS 555 (758)
T ss_dssp TSCEEEEETTC----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ET-TEEEEECC--CCCCBCCCCC
T ss_pred CCCEEEEccCC----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ec-CceEEEecCCCceEEecccC
Confidence 45678765543 358899999999987642111 1111222223 4788864 33 45889999998876653 3
Q ss_pred CcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCCCceeeEEcC
Q psy9769 394 MEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 394 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 472 (1026)
+|.. .-.+++.-+|.||+... +.+.+|||.+.+..... +|......++... +|.|| |||..+...+++.
T Consensus 556 l~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~-fG~~~Gl~~f~p~ 625 (758)
T 3ott_A 556 FSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVY-LGGADGFGISHSN 625 (758)
T ss_dssp ---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEE-EECBSEEEEEEC-
T ss_pred CCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEE-EecCCceEEEChh
Confidence 4432 22344445889988653 34889999998876543 3333333222222 56666 5666677777664
No 242
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=81.61 E-value=6.6 Score=43.26 Aligned_cols=135 Identities=13% Similarity=0.231 Sum_probs=68.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE-cCCCCccccceeeEEE--CCEEEEEec--cCCCeEEEeCCCCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS-VAEMPTRRCRAGLVFL--HEKVYAVGG--FNGSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG--~~~~~~~yd~~~~~W~~~~~ 393 (1026)
++.+++.|+.+ ..+..||..+..-.. +... ...-.+++.. +..+++.|| .++.+.+||..+.+....-
T Consensus 228 ~~~~l~s~~~d----~~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~- 300 (401)
T 4aez_A 228 DGLQLASGGND----NVVQIWDARSSIPKFTKTNH--NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV- 300 (401)
T ss_dssp TSSEEEEEETT----SCEEEEETTCSSEEEEECCC--SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE-
T ss_pred CCCEEEEEeCC----CeEEEccCCCCCccEEecCC--cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE-
Confidence 34566666644 368889988754322 1111 1111223332 457777775 6789999999876543221
Q ss_pred CcCCcceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCccee-EEEEE-CCEEEEEeCCCc
Q psy9769 394 MEARRSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSV-GVGVL-NGCLYAENLDGR 465 (1026)
Q Consensus 394 ~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~ 465 (1026)
.....-.+++.. ++ .+++.+|... ..+..||..+..+.....++...... +++.. ++...+.||.++
T Consensus 301 -~~~~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 301 -DAGSQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp -ECSSCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred -eCCCcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 111111222222 44 4555445332 57889998887776554333222211 22222 566666666443
No 243
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=81.24 E-value=8.5 Score=40.48 Aligned_cols=103 Identities=16% Similarity=0.142 Sum_probs=56.8
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEARR 398 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~~r 398 (1026)
+.+++.|+.+ ..+..||..+..-...-.............-++...+.|+.++.+.+||..+.+-.. +.. ...
T Consensus 25 ~~~l~s~~~d----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~--h~~ 98 (304)
T 2ynn_A 25 EPWVLTTLYS----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA--HPD 98 (304)
T ss_dssp SSEEEEEETT----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--CSS
T ss_pred CCEEEEEcCC----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC--CCC
Confidence 4456666654 468888988765332111111111122223356777889999999999998765321 111 111
Q ss_pred ceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 399 STLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 399 ~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
.-.+++.. ++.+++.|+.+ ..+..||..++
T Consensus 99 ~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~ 129 (304)
T 2ynn_A 99 YIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN 129 (304)
T ss_dssp CEEEEEECSSSSEEEEEETT-----SCEEEEEGGGT
T ss_pred cEEEEEEcCCCCEEEEECCC-----CeEEEEECCCC
Confidence 11222222 56677777765 45778887654
No 244
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=81.24 E-value=6.4 Score=47.87 Aligned_cols=143 Identities=15% Similarity=0.171 Sum_probs=76.7
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--C--CEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--H--EKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
+..++.|+.+ ..+..||..+++|..+..+.........+.+ + +.+++.||.++.+.+||..+..-.....+.
T Consensus 67 ~~~l~s~s~D----g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 67 GTILASCSYD----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp CSEEEEEETT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE
T ss_pred CCEEEEEeCC----CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee
Confidence 4566666654 3688899888888766554433333333333 2 678889999999999998876321111111
Q ss_pred CCcceeEEEEE---------------CCEEEEEeccCCCCCCCEEEEEECCCC--cEEEccCCCCCcceeEEEEE--C--
Q psy9769 396 ARRSTLGVAVL---------------NSLIYAVGGFDGSSGLNSAEVYDPSTE--KWNMIAPMSTRRSSVGVGVL--N-- 454 (1026)
Q Consensus 396 ~~r~~~~~~~~---------------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~-- 454 (1026)
.......++.+ ++.+++.|+.+ ..+..||..++ .|.....+........++.. +
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred cCCCceEEEEecCcccccccccccCCCCCEEEEEECC-----CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC
Confidence 11111112222 36677777765 34777776544 45544433322222223333 3
Q ss_pred -CEEEEEeCCC-ceeeEEc
Q psy9769 455 -GCLYAENLDG-RILGCVK 471 (1026)
Q Consensus 455 -~~lyv~GG~~-~~~~~~~ 471 (1026)
+.+.+.||.+ .+.-++.
T Consensus 218 ~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 218 LRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp SSEEEEEEESSSCEEEEEE
T ss_pred CCCEEEEEecCCEEEEecC
Confidence 6777777644 3443433
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.22 E-value=10 Score=45.47 Aligned_cols=115 Identities=19% Similarity=0.245 Sum_probs=72.9
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeCCCCe--EEeCCCCcCC--------cceeEEEEECCEEEEEeccCCCCCCCEEEEE
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDPSTNE--WSSAPPMEAR--------RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVY 428 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 428 (1026)
.+-++.++.||+... ++.++.+|..|.+ |+.-...+.. ....+.++.+++||+... -..+.++
T Consensus 71 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l~al 143 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRLIAL 143 (677)
T ss_dssp CCCEEETTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEEEEE
T ss_pred eCCEEECCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEEEEE
Confidence 344668999998754 5689999998875 9865433211 112244567899988642 1579999
Q ss_pred ECCCCc--EEEccC-CCC--CcceeEEEEECCEEEEEeC------CCceeeEEcCccc--EEEee
Q psy9769 429 DPSTEK--WNMIAP-MST--RRSSVGVGVLNGCLYAENL------DGRILGCVKEITD--WGLII 480 (1026)
Q Consensus 429 d~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~lyv~GG------~~~~~~~~~~~~~--W~~~~ 480 (1026)
|..+++ |+.-.. -+. .....+.++.++.+|+..+ .+.+..+|..+.+ |+.-.
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 998775 876432 111 1112233456899988654 3567778876643 87754
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=80.98 E-value=27 Score=42.58 Aligned_cols=150 Identities=9% Similarity=0.159 Sum_probs=86.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCC-CCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAE-MPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+++... ..+++||+.++++..+.. .+....-.+++. -++.+|+ |...+.+++||+.++++......+.
T Consensus 141 ~g~lwi~t~------~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~ 213 (795)
T 4a2l_A 141 PEQLLISTP------EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILG 213 (795)
T ss_dssp TTEEEEEET------TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----
T ss_pred CCCEEEEEC------CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCC
Confidence 456666532 468999999988876543 111110112222 3789988 4334468999999999987643332
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC---C--Ccc-eeEEEEE-CCEEEEEeCCCceee
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS---T--RRS-SVGVGVL-NGCLYAENLDGRILG 468 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p---~--~r~-~~~~~~~-~~~lyv~GG~~~~~~ 468 (1026)
...-.+... -++.||+... . ..+.+||+.++++......+ . +.. -.+++.- ++.|++-.. +++..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~-~-----~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~ 286 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATE-G-----AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF-NDLNI 286 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEB-S-----SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES-SCEEE
T ss_pred CCeeEEEEEcCCCCEEEEEC-C-----CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC-Chhhe
Confidence 222222222 3788887431 1 34889999999888764321 1 111 1222222 567777543 36778
Q ss_pred EEcCcccEEEeecC
Q psy9769 469 CVKEITDWGLIIEL 482 (1026)
Q Consensus 469 ~~~~~~~W~~~~~l 482 (1026)
|+..+..|......
T Consensus 287 ~~~~~~~~~~~~~~ 300 (795)
T 4a2l_A 287 YHEGTDSFASYSSN 300 (795)
T ss_dssp EETTTTEEEEECCC
T ss_pred EcCCCCeEEEEecC
Confidence 88877888776543
No 247
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=80.97 E-value=9.6 Score=41.14 Aligned_cols=105 Identities=10% Similarity=0.130 Sum_probs=57.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p 395 (1026)
++..++.|+.+ ..+..||..+++-.. .+...... .+++.. +..+++.|+.++.+.+||..+.+-...-...
T Consensus 138 dg~~l~sgs~d----~~i~iwd~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 138 SGTQAVSGSKD----ICIKVWDLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred CCCEEEEEeCC----CeEEEEECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 44566666654 358889988765322 22211111 122222 3368888999999999999876543221111
Q ss_pred CCcceeEEEEE---CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 396 ARRSTLGVAVL---NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 396 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.......++.+ ++++++.|+.+ ..+..||..+++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~ 248 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTS 248 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC--
T ss_pred eeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCc
Confidence 11111222222 56688888765 468899987654
No 248
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=80.96 E-value=28 Score=38.07 Aligned_cols=98 Identities=14% Similarity=0.051 Sum_probs=55.3
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCE-EEEEeccCCCCCCCEEEEEECCCCcE--EEccC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSL-IYAVGGFDGSSGLNSAEVYDPSTEKW--NMIAP 440 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~~~ 440 (1026)
++..++.|+.++.+.+||..+.+-...-.......-.+++.. ++. +++.|+.+ ..+..||..+..- ..+..
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTTSCSEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEEEcCCCcCchhhhhc
Confidence 678888899999999999987653221111111112222222 444 77777765 5789999987542 22211
Q ss_pred CCCCcceeEEEEECCEEEEEeCCCceee
Q psy9769 441 MSTRRSSVGVGVLNGCLYAENLDGRILG 468 (1026)
Q Consensus 441 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 468 (1026)
- ....-.+++..++++++.|+.++...
T Consensus 333 ~-~~~~v~~~~~~~~~~l~s~~~d~~v~ 359 (420)
T 3vl1_A 333 N-EGTPINNVYFAAGALFVSSGFDTSIK 359 (420)
T ss_dssp S-TTSCEEEEEEETTEEEEEETTTEEEE
T ss_pred c-CCCCceEEEeCCCCEEEEecCCccEE
Confidence 0 11122233445788888887654433
No 249
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=80.89 E-value=22 Score=37.04 Aligned_cols=140 Identities=10% Similarity=0.071 Sum_probs=75.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEc-CCCCcc--cc-ceeeEE-ECCEEEEEeccC---------------CCeE
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSV-AEMPTR--RC-RAGLVF-LHEKVYAVGGFN---------------GSLR 379 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~-~~~p~~--r~-~~~~~~-~~~~iyv~GG~~---------------~~~~ 379 (1026)
+.+|+.... +.+++||+. ++...+ ...+.. .. -..++. -+|.+|+..... +.++
T Consensus 83 g~l~v~~~~-----~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~ 156 (314)
T 1pjx_A 83 NQLFVADMR-----LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIY 156 (314)
T ss_dssp SEEEEEETT-----TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEE
T ss_pred CcEEEEECC-----CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEE
Confidence 678877542 368999998 777766 432211 11 122332 257899876443 4688
Q ss_pred EEeCCCCeEEeCC-CCcCCcceeEEEEE-----CC-EEEEEeccCCCCCCCEEEEEECC-CCcEEE---ccCCCCC--cc
Q psy9769 380 VYDPSTNEWSSAP-PMEARRSTLGVAVL-----NS-LIYAVGGFDGSSGLNSAEVYDPS-TEKWNM---IAPMSTR--RS 446 (1026)
Q Consensus 380 ~yd~~~~~W~~~~-~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~--r~ 446 (1026)
+||+. .+..... .+..+ .+.+.. ++ .+|+.... ...+++||+. ++++.. ...++.. ..
T Consensus 157 ~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (314)
T 1pjx_A 157 CFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGG 227 (314)
T ss_dssp EECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCE
T ss_pred EECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCC
Confidence 89886 5554332 11111 233333 34 57776532 2578899876 444421 1222222 11
Q ss_pred eeEEEEE-CCEEEEEe-CCCceeeEEcCcc
Q psy9769 447 SVGVGVL-NGCLYAEN-LDGRILGCVKEIT 474 (1026)
Q Consensus 447 ~~~~~~~-~~~lyv~G-G~~~~~~~~~~~~ 474 (1026)
..+++.- ++++|+.. +.+.+..++..+.
T Consensus 228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred CCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence 2223322 67899886 4566777776633
No 250
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=80.67 E-value=18 Score=40.06 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=58.1
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCcceeEEEEE--C
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARRSTLGVAVL--N 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 407 (1026)
..++.+|..+.+...+...+. ...+.+.. +| .|++.+..++ .+++||+.+.+...+...+. ......+ +
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spd 277 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPD 277 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS---CEEEEEECTT
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC---cccceEECCC
Confidence 589999999988776654332 11222222 44 4665655444 48899999888776654331 1222233 5
Q ss_pred CEEEEEeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 408 SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 408 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
|+.+++++..+ ....++.+|+.+++-..+.
T Consensus 278 g~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 278 SQNLAFTSDQA--GRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp SSEEEEEECTT--SSCEEEEEETTSSCCEECC
T ss_pred CCEEEEEECCC--CCcEEEEEECCCCCEEEEe
Confidence 65444444321 1358999999887755543
No 251
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.55 E-value=7.4 Score=42.83 Aligned_cols=105 Identities=19% Similarity=0.276 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++..++.|+.+ ..+..||..+.+-...-.- ....-.+++.. ++..++.|+.++.+.+||..+.+....-...
T Consensus 134 dg~~l~s~~~d----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-- 206 (393)
T 1erj_A 134 DGKFLATGAED----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE-- 206 (393)
T ss_dssp TSSEEEEEETT----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC--
Confidence 34556666654 3688899887654322110 11111222222 4666778889999999999987754322111
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
..-.+++.. ++++++.|+.+ ..+..||+.++.-
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~ 241 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFL 241 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcE
Confidence 111222222 67788888865 4588899887764
No 252
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=80.55 E-value=7.4 Score=42.69 Aligned_cols=101 Identities=12% Similarity=0.122 Sum_probs=55.4
Q ss_pred EEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcCCcc
Q psy9769 322 MLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEARRS 399 (1026)
Q Consensus 322 i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~~r~ 399 (1026)
.+++|+.+ ..+..||..+.+-...-.... ..-.+++.. ++..++.|+.++.+.+||..+.+... +.. ....
T Consensus 219 ~~~~~~~~----g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~ 291 (425)
T 1r5m_A 219 KFVIPGPK----GAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQS 291 (425)
T ss_dssp EEEEECGG----GCEEEEETTCSSCSEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSC
T ss_pred EEEEEcCC----CeEEEEEcCCCceeeeeccCC-CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCcc
Confidence 35556543 468889987753221111011 111222322 56677888889999999988754221 111 1112
Q ss_pred eeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 400 TLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 400 ~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
-.+++.. ++ .++.|+.+ ..+..||+.+.+-
T Consensus 292 i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 292 IVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTL 322 (425)
T ss_dssp EEEEEEETTT-EEEEEETT-----SEEEEEETTTTEE
T ss_pred EEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcE
Confidence 2233333 55 66666654 4789999877653
No 253
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.27 E-value=17 Score=38.45 Aligned_cols=141 Identities=12% Similarity=0.069 Sum_probs=73.4
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCc----EEEcCCCCccccceeeEE-ECCE-EEEEeccCCCeEEEeC-CCCeEEeCCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTER----WQSVAEMPTRRCRAGLVF-LHEK-VYAVGGFNGSLRVYDP-STNEWSSAPP 393 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~yd~-~~~~W~~~~~ 393 (1026)
.+++.|+.+ ..+..||..+.. ...... ....-.+++. -++. .++.|+.++.+.+||. .+.....+..
T Consensus 24 ~~l~~~~~d----~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 24 SLLLITSWD----GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp TEEEEEETT----SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBS
T ss_pred CEEEEEcCC----CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccc
Confidence 344555533 467778776655 322221 1111122222 3577 7788999999999999 8877655544
Q ss_pred CcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCC---c----EEEccCCCCCcceeEEEEECCEEEEEeCCCce
Q psy9769 394 MEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTE---K----WNMIAPMSTRRSSVGVGVLNGCLYAENLDGRI 466 (1026)
Q Consensus 394 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~----W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 466 (1026)
.+....-.+++...+..++.|+.+ ..+..||+.+. . .+.+..+..+..-.+++...+.+++.+..+.+
T Consensus 98 ~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 172 (342)
T 1yfq_A 98 NEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQV 172 (342)
T ss_dssp CCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEE
T ss_pred cCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeE
Confidence 112222223333335666677654 46888887540 0 22233333333333444445664444444455
Q ss_pred eeEEcC
Q psy9769 467 LGCVKE 472 (1026)
Q Consensus 467 ~~~~~~ 472 (1026)
.-++..
T Consensus 173 ~i~d~~ 178 (342)
T 1yfq_A 173 QWFRLP 178 (342)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 555443
No 254
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=80.18 E-value=24 Score=40.89 Aligned_cols=92 Identities=16% Similarity=0.256 Sum_probs=56.6
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC-CcceeEEEEE----
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA-RRSTLGVAVL---- 406 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~---- 406 (1026)
..+..||..+..... ..+.........+.+ ++..++.|+.++.+.+||..+.+-... +.. ......++.+
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~ 543 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS--RWAFRTSKINAISWKPAE 543 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC--CSCCCSSCEEEEEECCCC
T ss_pred CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeE--eecCCCCceeEEEEcCcc
Confidence 468889988776543 222222222223333 678888999999999999987764332 221 1112222333
Q ss_pred --------CCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 407 --------NSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 407 --------~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
++++++.|+.+ ..+..||..+.
T Consensus 544 ~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~ 573 (615)
T 1pgu_A 544 KGANEEEIEEDLVATGSLD-----TNIFIYSVKRP 573 (615)
T ss_dssp ------CCSCCEEEEEETT-----SCEEEEESSCT
T ss_pred ccccccccCCCEEEEEcCC-----CcEEEEECCCC
Confidence 67888888765 46889998775
No 255
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=80.09 E-value=63 Score=34.02 Aligned_cols=148 Identities=14% Similarity=0.183 Sum_probs=83.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCC-------Ccccc-ceeeEEE-C-CEEEEEeccCCCeEEEeCCCCeE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEM-------PTRRC-RAGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEW 388 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W 388 (1026)
++.+|+..+. ....+.+||+....-..+... +.... -+++++- + +.||+....++.+.+||+.+.++
T Consensus 154 ~g~lyv~d~~---~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 154 TGAVFVSDGY---CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp TCCEEEEECS---SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred CCeEEEEeCC---CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 5688888752 135788999665443333211 11112 2334443 3 89999998888999999987665
Q ss_pred Ee-CCCCcCCcceeEEEEECCEEEEEeccCC--CCCCCEEEEEECCCCcEEEc-cCCCCCcceeEEEEE--CCEEEEEeC
Q psy9769 389 SS-APPMEARRSTLGVAVLNSLIYAVGGFDG--SSGLNSAEVYDPSTEKWNMI-APMSTRRSSVGVGVL--NGCLYAENL 462 (1026)
Q Consensus 389 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG 462 (1026)
.. +........-.+.+...+.+|...|... ......+..||+.+++.... .+.+.....+..+.+ ++.|||...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 231 VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 43 2211222222344445688888877422 22246899999888876543 222222222233333 679999875
Q ss_pred -CCceeeE
Q psy9769 463 -DGRILGC 469 (1026)
Q Consensus 463 -~~~~~~~ 469 (1026)
.+.+..+
T Consensus 311 ~~~~I~~~ 318 (329)
T 3fvz_A 311 HTNTVWKF 318 (329)
T ss_dssp SSCCEEEE
T ss_pred CCCEEEEE
Confidence 3344443
No 256
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=80.01 E-value=10 Score=41.60 Aligned_cols=105 Identities=6% Similarity=0.062 Sum_probs=56.3
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccc--------------cceeeEEECCEEEEEeccCCCeEEEeCCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRR--------------CRAGLVFLHEKVYAVGGFNGSLRVYDPST 385 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~yd~~~ 385 (1026)
+..++.|+.+ ..+..||..+.+....-..+... .-.+++...+..+++|+.++.+.+||..+
T Consensus 161 ~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~ 236 (425)
T 1r5m_A 161 GTHIISMDVE----NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE 236 (425)
T ss_dssp SSEEEEEETT----CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC
T ss_pred CCEEEEEecC----CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC
Confidence 3344455543 35778888776554322221111 02334444455578889999999999987
Q ss_pred CeEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 386 NEWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 386 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.+-...-... ...-.+++.. ++..++.|+.+ ..+..||..+.+
T Consensus 237 ~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 280 (425)
T 1r5m_A 237 KTPTGKLIGH-HGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGN 280 (425)
T ss_dssp SSCSEEECCC-SSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBS
T ss_pred CceeeeeccC-CCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCc
Confidence 6422111111 1111222332 56677777754 458888887654
No 257
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=79.77 E-value=4.4 Score=44.09 Aligned_cols=131 Identities=13% Similarity=0.102 Sum_probs=67.2
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
.+++.||.+ ..+..||..+.+-..............++.+ ++.+++.|+.++.+.+||..+.+- +..+...
T Consensus 195 ~~~~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~ 268 (357)
T 4g56_B 195 TIFLSCGED----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSAVH 268 (357)
T ss_dssp SCEEEEETT----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--CEEECCC
T ss_pred ceeeeeccC----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--eEEEecc
Confidence 455666644 3577888876543322221111122222222 467888899999999999876542 1111111
Q ss_pred cceeEEEEE--CC-EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEE--ECCEEEEEeCCC
Q psy9769 398 RSTLGVAVL--NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGV--LNGCLYAENLDG 464 (1026)
Q Consensus 398 r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~ 464 (1026)
.....++.+ ++ ++.+.|+.+ ..+..||..+++.... +.....-.+++. .++.+++.||.+
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D-----~~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISED-----CTVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred ceeEEEEEEcCCCCCEEEEEeCC-----CEEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 111222232 34 566667655 4588899887765432 221111122332 256666666643
No 258
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=79.12 E-value=12 Score=39.63 Aligned_cols=112 Identities=13% Similarity=0.214 Sum_probs=60.1
Q ss_pred CEEEEEeccCCCeEEEeCCC-CeEEeCCCCcCCcceeEEEEE--C----CEEEEEeccCCCCCCCEEEEEECCC---CcE
Q psy9769 366 EKVYAVGGFNGSLRVYDPST-NEWSSAPPMEARRSTLGVAVL--N----SLIYAVGGFDGSSGLNSAEVYDPST---EKW 435 (1026)
Q Consensus 366 ~~iyv~GG~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~~~~~v~~yd~~~---~~W 435 (1026)
+..++.||.++.+.+||..+ ..|.....+..-......+.+ + +.+++.|+.+ ..+..||+.+ +.|
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----~~v~iw~~~~~~~~~~ 253 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----GRVFIWTCDDASSNTW 253 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----CEEEEEECSSTTCCCC
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-----CeEEEEEccCccccch
Confidence 35778899999999999864 457665544322222222222 2 2567777765 4677888765 334
Q ss_pred EE--ccCCCCCcceeEEEEE-CCEEEEEeCCC-ceeeEEcC-cccEEEeecCCC
Q psy9769 436 NM--IAPMSTRRSSVGVGVL-NGCLYAENLDG-RILGCVKE-ITDWGLIIELPN 484 (1026)
Q Consensus 436 ~~--~~~~p~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~~-~~~W~~~~~lP~ 484 (1026)
.. +.... ..-.+++.. ++.+.+.||.+ .+.-++.. ...|..+..++.
T Consensus 254 ~~~~~~~~~--~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 254 SPKLLHKFN--DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp BCCEEEECS--SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred hhhhhhcCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 21 11111 111122222 56666666644 44334333 367888877764
No 259
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=79.07 E-value=11 Score=40.28 Aligned_cols=98 Identities=14% Similarity=0.143 Sum_probs=53.9
Q ss_pred EEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEecc--CCCeEEEeCCCCeEEeCCCCcC-CcceeEEEE-ECC-
Q psy9769 335 SVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGF--NGSLRVYDPSTNEWSSAPPMEA-RRSTLGVAV-LNS- 408 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~--~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~-~~~- 408 (1026)
.++.+|+.+.+++.+........-..++. -+|++|+.+.. ++.+++||+.+.+++.+..... ...-..++. -++
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC
Confidence 46778888888876543222211122222 36788887743 5688999998888766543211 111122333 345
Q ss_pred EEEEEeccCCCCCCCEEEEEECC-CCcEEE
Q psy9769 409 LIYAVGGFDGSSGLNSAEVYDPS-TEKWNM 437 (1026)
Q Consensus 409 ~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~ 437 (1026)
.||+.+..+ ..+..||+. +++...
T Consensus 99 ~l~~~~~~~-----~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 99 LVYSANYHK-----GTAEVMKIAADGALTL 123 (347)
T ss_dssp EEEEEETTT-----TEEEEEEECTTSCEEE
T ss_pred EEEEEeCCC-----CEEEEEEeCCCCCeee
Confidence 466665322 567788874 344443
No 260
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.07 E-value=16 Score=38.34 Aligned_cols=137 Identities=14% Similarity=0.038 Sum_probs=69.4
Q ss_pred cEEEEEECCCCcEEEcCCCCccc-cceeeEE-ECC-EEEEEeccCCCeEEEeCCCCeEEeCCCCcCC----cceeEEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRR-CRAGLVF-LHE-KVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR----RSTLGVAVL 406 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~ 406 (1026)
..+..||+.+.+....-+++... .-+.++. -++ .+|+.++.++.+++||+.+.+-...-+.+.+ ..-+.++..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s 90 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALS 90 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEEC
Confidence 47899999887654322222211 1122332 244 7888888788999999988764321111110 011122222
Q ss_pred -CC-EEEEEecc---CCCC---CCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEEeCCCceeeEEcCcc
Q psy9769 407 -NS-LIYAVGGF---DGSS---GLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAENLDGRILGCVKEIT 474 (1026)
Q Consensus 407 -~~-~iyv~GG~---~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~ 474 (1026)
++ .+|+.... .... ....+..||+.+.+....-+.+. ...+++.. ++ .||+.+ +.+..++..+.
T Consensus 91 ~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~--~~i~~~d~~~~ 164 (337)
T 1pby_B 91 PDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGLG--RDLHVMDPEAG 164 (337)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEES--SSEEEEETTTT
T ss_pred CCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEeC--CeEEEEECCCC
Confidence 44 67776421 1111 13789999998876543222221 11222222 34 466663 44555555443
No 261
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=79.07 E-value=9.8 Score=40.66 Aligned_cols=107 Identities=11% Similarity=0.086 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCC-CcEEEcCCCCccccc-eeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKT-ERWQSVAEMPTRRCR-AGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
+..++.|+.+ ..+..||..+ ..... .+...... .+++.. ++..++.|+.++.+.+||..+.+....-..
T Consensus 187 ~~~l~~~~~d----g~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-- 258 (369)
T 3zwl_B 187 GKYIIAGHKD----GKISKYDVSNNYEYVD--SIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET-- 258 (369)
T ss_dssp GCEEEEEETT----SEEEEEETTTTTEEEE--EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--
T ss_pred CCEEEEEcCC----CEEEEEECCCCcEeEE--EEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC--
Confidence 3455556543 4788999887 33221 11111111 122222 567778888899999999987654332111
Q ss_pred CcceeEEEE-ECCEEEEEeccCCCCC---------CCEEEEEECCCCc
Q psy9769 397 RRSTLGVAV-LNSLIYAVGGFDGSSG---------LNSAEVYDPSTEK 434 (1026)
Q Consensus 397 ~r~~~~~~~-~~~~iyv~GG~~~~~~---------~~~v~~yd~~~~~ 434 (1026)
......++. -++..+++|+.++... ...+..||..+.+
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 111122222 2555556665433211 1267888876654
No 262
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=79.05 E-value=17 Score=38.06 Aligned_cols=150 Identities=15% Similarity=0.176 Sum_probs=79.1
Q ss_pred cEEEEEECCCCcEEEcCCCCc----cccceeeEEECCEEEEEecc-----------CCCeEEEeCCCCeEEeCC-CCcCC
Q psy9769 334 RSVECYDFKTERWQSVAEMPT----RRCRAGLVFLHEKVYAVGGF-----------NGSLRVYDPSTNEWSSAP-PMEAR 397 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~----~r~~~~~~~~~~~iyv~GG~-----------~~~~~~yd~~~~~W~~~~-~~p~~ 397 (1026)
..+++||+.+.+++.+...+. .+.+..++--+|++|+..-. .+.++++|+.. +...+. .+..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~- 150 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI- 150 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB-
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc-
Confidence 478999999998887654322 22222222235788874311 13577788753 333221 1111
Q ss_pred cceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEEC--CCCcEEE---ccCCCCCcce-eEEEE-ECCEEEEEeC-CCcee
Q psy9769 398 RSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDP--STEKWNM---IAPMSTRRSS-VGVGV-LNGCLYAENL-DGRIL 467 (1026)
Q Consensus 398 r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~r~~-~~~~~-~~~~lyv~GG-~~~~~ 467 (1026)
..+.+.. ++ .+|+..... ..+++||. .++.... ...++..... .++++ -+++||+... .+.+.
T Consensus 151 --pngi~~spdg~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 151 --SNGLDWSLDHKIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVI 223 (297)
T ss_dssp --EEEEEECTTSCEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEE
T ss_pred --ccceEEcCCCCEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEE
Confidence 1233332 34 688876432 57888875 5555432 2222221112 23333 2678998863 45677
Q ss_pred eEEcCcccEEEeecCCCcccceEEE
Q psy9769 468 GCVKEITDWGLIIELPNFLSASVHI 492 (1026)
Q Consensus 468 ~~~~~~~~W~~~~~lP~~~~g~~~~ 492 (1026)
.|++.+.+.....++|......+++
T Consensus 224 ~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp EECTTTCCEEEEEECSSSBEEEEEE
T ss_pred EEcCCCceEEEEEECCCCCceEEEE
Confidence 7877766665555677533333333
No 263
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=78.89 E-value=56 Score=33.50 Aligned_cols=64 Identities=8% Similarity=0.037 Sum_probs=38.5
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
++..++.|+.++.+.+||...... .............+..-++. ++.|+.+ ..+..||..+.+-
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQNDKVIK-TFSGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEETTSCEEEEETTEEEE-EECSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCEEEEecCceEE-EEeccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhh
Confidence 677788899999999999433222 22221222222223334677 6677655 4788999876653
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.59 E-value=12 Score=43.81 Aligned_cols=117 Identities=11% Similarity=0.165 Sum_probs=72.5
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeC-CCCe--EEeCCCCcC-----Ccc---eeEEEE--ECCE----EEEEeccCCCCC
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDP-STNE--WSSAPPMEA-----RRS---TLGVAV--LNSL----IYAVGGFDGSSG 421 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~-~~~~--W~~~~~~p~-----~r~---~~~~~~--~~~~----iyv~GG~~~~~~ 421 (1026)
.+-++.++.||+.+.+++.++.+|. .+.+ |+.-...+. .++ ..+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------ 129 (599)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------
T ss_pred eccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------
Confidence 4456679999998765778999999 7764 987543321 111 123344 5777 887532
Q ss_pred CCEEEEEECCCCc--EEEccCCCCC--cceeEEEEECCEEEEEeC------CCceeeEEcCccc--EEEeec
Q psy9769 422 LNSAEVYDPSTEK--WNMIAPMSTR--RSSVGVGVLNGCLYAENL------DGRILGCVKEITD--WGLIIE 481 (1026)
Q Consensus 422 ~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~lyv~GG------~~~~~~~~~~~~~--W~~~~~ 481 (1026)
-..+..+|..+++ |+.-..-+.. ....+-++.++++|+-.+ .+.+..+|..+.+ |+.-..
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 130 DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 1578999998776 8753221111 111223456898887543 4677888887643 977644
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=78.58 E-value=51 Score=34.40 Aligned_cols=150 Identities=11% Similarity=0.149 Sum_probs=81.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCe---EEeCCC-
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNE---WSSAPP- 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~---W~~~~~- 393 (1026)
++.+|+...... ...++.||+.+.+.+.+...+..+.....+.. ++.+|+.--..+.++++|+.+.. |..-+.
T Consensus 82 dG~l~vad~~~~--~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 82 NGDLVATGWNAD--SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp TSCEEEEEECTT--SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CCcEEEEeccCC--cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 456777653211 13588899888888777665554444444433 56788876556789999987642 321110
Q ss_pred ---CcCC--cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCC-CcE---EEccCCCCCcceeEEEEE-CCEEEEEeC-
Q psy9769 394 ---MEAR--RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPST-EKW---NMIAPMSTRRSSVGVGVL-NGCLYAENL- 462 (1026)
Q Consensus 394 ---~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~p~~r~~~~~~~~-~~~lyv~GG- 462 (1026)
.+.. ....+...-++.||+.-- ..+.+++||+.. ++. .....+..| .++++- +|+|||...
T Consensus 160 ~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~ 231 (306)
T 2p4o_A 160 ARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHI 231 (306)
T ss_dssp SCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBT
T ss_pred ccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCC
Confidence 1111 112233334568998742 236899999864 222 222222222 122332 678998863
Q ss_pred CCceeeEEcCcccEEEe
Q psy9769 463 DGRILGCVKEITDWGLI 479 (1026)
Q Consensus 463 ~~~~~~~~~~~~~W~~~ 479 (1026)
.+.+..++.. .+...+
T Consensus 232 ~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 232 YNSVVRIAPD-RSTTII 247 (306)
T ss_dssp TCCEEEECTT-CCEEEE
T ss_pred CCeEEEECCC-CCEEEE
Confidence 4566666654 444333
No 266
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=78.47 E-value=16 Score=40.11 Aligned_cols=92 Identities=16% Similarity=0.201 Sum_probs=58.0
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYA 412 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 412 (1026)
..+..||..+.+.......+....-.+++.. ++..+++|+.++.+.+||..+.+....-. .......+...++.+++
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~ 190 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA--GHQARVGCLSWNRHVLS 190 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEEETTEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec--CCCCceEEEEECCCEEE
Confidence 4789999998887665443322222223322 56778888899999999998776432211 11222333445677777
Q ss_pred EeccCCCCCCCEEEEEECCC
Q psy9769 413 VGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 413 ~GG~~~~~~~~~v~~yd~~~ 432 (1026)
.|+.+ ..+..||..+
T Consensus 191 ~~~~d-----g~i~i~d~~~ 205 (401)
T 4aez_A 191 SGSRS-----GAIHHHDVRI 205 (401)
T ss_dssp EEETT-----SEEEEEETTS
T ss_pred EEcCC-----CCEEEEeccc
Confidence 87765 5788999874
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.36 E-value=13 Score=44.36 Aligned_cols=114 Identities=18% Similarity=0.271 Sum_probs=71.3
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeCCCCe--EEeCCCCcCCc--------ceeEEEEECCEEEEEeccCCCCCCCEEEEE
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDPSTNE--WSSAPPMEARR--------STLGVAVLNSLIYAVGGFDGSSGLNSAEVY 428 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 428 (1026)
.+-++.++.||+... ++.++.+|..+.+ |+.-...+... ...+.++.+++||+... + ..+..+
T Consensus 60 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d-----g~l~al 132 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-D-----GRLIAL 132 (668)
T ss_dssp CCCEEETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-T-----SEEEEE
T ss_pred cCCEEECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-C-----CEEEEE
Confidence 344678999998754 5578899988765 98754332110 11234567899987542 1 579999
Q ss_pred ECCCCc--EEEccCCCCC--cceeEEEEECCEEEEEeC------CCceeeEEcCccc--EEEe
Q psy9769 429 DPSTEK--WNMIAPMSTR--RSSVGVGVLNGCLYAENL------DGRILGCVKEITD--WGLI 479 (1026)
Q Consensus 429 d~~~~~--W~~~~~~p~~--r~~~~~~~~~~~lyv~GG------~~~~~~~~~~~~~--W~~~ 479 (1026)
|..|++ |+.-..-+.. ....+.++.++.+|+..+ .+.+..+|..+.+ |+.-
T Consensus 133 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 133 DAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp ETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 998775 9865422211 112233567899888643 2567778876643 9765
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=78.35 E-value=17 Score=42.52 Aligned_cols=113 Identities=13% Similarity=0.186 Sum_probs=67.7
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeCCCCe--EEeCCCCcCC---cc---eeEEEEECCEEEEEeccCCCCCCCEEEEEEC
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDPSTNE--WSSAPPMEAR---RS---TLGVAVLNSLIYAVGGFDGSSGLNSAEVYDP 430 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~~p~~---r~---~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 430 (1026)
.+-++.++.||+.+..++ ++.+|..+.+ |+.-...+.. .+ ..+.++.+++||+... ...+..+|.
T Consensus 62 ~~P~v~~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~AlD~ 134 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVALNK 134 (582)
T ss_dssp CCCEEETTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEEEES
T ss_pred eccEEECCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEEEEC
Confidence 344678999999876554 9999998765 9764432211 11 1234567999988532 157999999
Q ss_pred CCCc--EEEccCCCCCc--ceeEEEEECC------EEEEEeC------CCceeeEEcCcc--cEEE
Q psy9769 431 STEK--WNMIAPMSTRR--SSVGVGVLNG------CLYAENL------DGRILGCVKEIT--DWGL 478 (1026)
Q Consensus 431 ~~~~--W~~~~~~p~~r--~~~~~~~~~~------~lyv~GG------~~~~~~~~~~~~--~W~~ 478 (1026)
.+++ |+.-..-+... ...+-++.++ .+|+-.. .+.+..+|..+. .|..
T Consensus 135 ~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 135 NTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 8876 97543221111 1112234566 6766432 456777777663 3954
No 269
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=78.29 E-value=13 Score=39.04 Aligned_cols=106 Identities=15% Similarity=0.188 Sum_probs=56.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
..+++.|+.+ ..+..||..+..-.........+.-..+... ++.+.+.|+.++.+.+||..+.+-.. .+..
T Consensus 153 ~~~l~sgs~D----~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~--~~~~ 226 (304)
T 2ynn_A 153 PSTFASGCLD----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA--TLEG 226 (304)
T ss_dssp TTEEEEEETT----SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEE--EEEC
T ss_pred CCEEEEEeCC----CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccce--eeCC
Confidence 3466666654 3678888754321100000111111112221 45677888999999999998765321 1111
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.......+.+ ++.+++.|+.+ ..+..||+.+.+-.
T Consensus 227 h~~~v~~~~~~p~~~~l~s~s~D-----g~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIISGSED-----GTLKIWNSSTYKVE 263 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcee
Confidence 1111222222 56677778765 45888998776543
No 270
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=78.01 E-value=63 Score=37.22 Aligned_cols=141 Identities=18% Similarity=0.166 Sum_probs=73.4
Q ss_pred EEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCcccc---ce-eeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEeCC-CC
Q psy9769 322 MLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRC---RA-GLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSSAP-PM 394 (1026)
Q Consensus 322 i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~-~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~~~-~~ 394 (1026)
+++.|+.+ ..+..||..+.+-.. .++.... .. +++.. + +..++.|+.++.+.+||..+.+....- ..
T Consensus 175 ~l~~~~~d----~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 248 (615)
T 1pgu_A 175 RSMTVGDD----GSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD 248 (615)
T ss_dssp EEEEEETT----TEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT
T ss_pred EEEEEeCC----CcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccc
Confidence 56666543 468888876654322 2221111 22 22222 4 678888999999999999877643321 10
Q ss_pred --cCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC-C--CcceeEEEE-ECCEEEEEeCCCceee
Q psy9769 395 --EARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS-T--RRSSVGVGV-LNGCLYAENLDGRILG 468 (1026)
Q Consensus 395 --p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~--~r~~~~~~~-~~~~lyv~GG~~~~~~ 468 (1026)
.....-.+++..++..++.|+.+ ..+..||+.+.+....-..+ . .....+++. -++.+++.+..+.+..
T Consensus 249 ~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~ 323 (615)
T 1pgu_A 249 QEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 323 (615)
T ss_dssp TBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEE
T ss_pred ccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEE
Confidence 11111112222277777888765 57889999877654332222 1 111122222 3444444444555555
Q ss_pred EEcCc
Q psy9769 469 CVKEI 473 (1026)
Q Consensus 469 ~~~~~ 473 (1026)
++..+
T Consensus 324 ~d~~~ 328 (615)
T 1pgu_A 324 YELGH 328 (615)
T ss_dssp EETTE
T ss_pred EECCC
Confidence 55443
No 271
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=78.00 E-value=30 Score=38.18 Aligned_cols=113 Identities=6% Similarity=0.011 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCE-EEEEeccCC--CeEEEeCCCCeEEeCCCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEK-VYAVGGFNG--SLRVYDPSTNEWSSAPPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~--~~~~yd~~~~~W~~~~~~p 395 (1026)
..|++.+..+ ....++.||..+.+...+...+.. ..+.+. -+|+ |+..+..++ .++.+|..+.....+...
T Consensus 235 ~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~- 309 (415)
T 2hqs_A 235 SKLAFALSKT--GSLNLYVMDLASGQIRQVTDGRSN--NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE- 309 (415)
T ss_dssp SEEEEEECTT--SSCEEEEEETTTCCEEECCCCSSC--EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS-
T ss_pred CEEEEEEecC--CCceEEEEECCCCCEEeCcCCCCc--ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC-
Confidence 3455455432 235799999998887776543321 112222 2454 554443334 678889988765544321
Q ss_pred CCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC
Q psy9769 396 ARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 396 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
.......+. -+|+.+++++..+. ...++.+|+.+++...+..
T Consensus 310 -~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 310 -GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp -SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCC
T ss_pred -CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecC
Confidence 122222222 25655555554321 3689999999998876654
No 272
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=77.98 E-value=0.5 Score=49.18 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=54.9
Q ss_pred echhhHHHHHHHHHhcCchhHHhHHHHhhhcccC------------CcchhhHHHhhhh--cCchhHHHHHHhhhhhh--
Q psy9769 130 VTEENVQMLLPAANLLQLTDVRDACCDFLQCQLH------------PTNCLGIRAFADL--HSCLDLLSTAENYIELH-- 193 (1026)
Q Consensus 130 i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~------------~~n~~~~~~~a~~--~~~~~L~~~~~~~i~~~-- 193 (1026)
++.+|+..++..|+.|+++.|.+.|.+|+..++. .+....++.--.. ..-..+.+++..|+..+
T Consensus 131 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~ 210 (256)
T 3hve_A 131 IAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTE 210 (256)
T ss_dssp CCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--C
T ss_pred CCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHH
Confidence 6788999999999999999999999999987632 1112222211111 11234566666666433
Q ss_pred -----hhheecccccccCCHhhHhceeccccc
Q psy9769 194 -----FAEIVECEEFLSLSHEQVLGLISSDKL 220 (1026)
Q Consensus 194 -----~~~l~~~~~f~~L~~~~l~~ll~~~~l 220 (1026)
+..+++.-+|..|+.+.|.+.+..+.+
T Consensus 211 ~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l 242 (256)
T 3hve_A 211 IRKVHMKDVMSALWVSGLDSSYLREQMLNEPL 242 (256)
T ss_dssp CSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHhcChH
Confidence 344555566666666666655554433
No 273
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=77.93 E-value=41 Score=36.94 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=60.0
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIY 411 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 411 (1026)
+.++.||..+++...+-.+......-.++.+ +|..++.|+.++.+.+||..+.+-....... .....+...++.+.
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h--~~~v~~~s~~~~~l 202 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH--SARVGSLSWNSYIL 202 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEEEETTEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCC--CCceEEEeeCCCEE
Confidence 4799999999887665444333222222222 5778889999999999999887643221111 22234455677888
Q ss_pred EEeccCCCCCCCEEEEEECCCCc
Q psy9769 412 AVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 412 v~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+.|+.+ ..+..+|..+..
T Consensus 203 ~sgs~d-----~~i~~~d~~~~~ 220 (420)
T 4gga_A 203 SSGSRS-----GHIHHHDVRVAE 220 (420)
T ss_dssp EEEETT-----SEEEEEETTSSS
T ss_pred EEEeCC-----CceeEeeecccc
Confidence 888765 467778776544
No 274
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=77.92 E-value=15 Score=39.81 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCC-Ccc---ccc-eeeEEE-CCEEEEEeccC---CCeEEEeCCCCeEE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEM-PTR---RCR-AGLVFL-HEKVYAVGGFN---GSLRVYDPSTNEWS 389 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~-p~~---r~~-~~~~~~-~~~iyv~GG~~---~~~~~yd~~~~~W~ 389 (1026)
++ +++.|+.+ ..+..||..+.+....-.. +.. ... .+++.. ++.+++.|+.+ +.+.+||..+.+-.
T Consensus 197 ~~-~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 197 RG-LIATGFNN----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp TS-EEEEECTT----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred Cc-eEEEEeCC----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 34 66666643 4688999887654322111 001 111 222222 56777888888 88999999876432
Q ss_pred e-CCCCc--C--------CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 390 S-APPME--A--------RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 390 ~-~~~~p--~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
. +...+ . .......+.+ ++.+++.|+.+ ..+..||..+.+-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 272 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKTKER 325 (397)
T ss_dssp EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCce
Confidence 1 11100 0 1112222333 56777777754 4788999877654
No 275
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=77.35 E-value=18 Score=39.90 Aligned_cols=64 Identities=14% Similarity=0.179 Sum_probs=38.3
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE--ECCEEEEEeccCCCeEEEeCCCCeEE
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF--LHEKVYAVGGFNGSLRVYDPSTNEWS 389 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~yd~~~~~W~ 389 (1026)
+..++.|+.+ ..+..||..+...... +.........+. -++.+++.|+.++.+.+||..+....
T Consensus 204 ~~~l~s~s~D----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 204 GDHIVSASRD----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp SSEEEEEETT----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCEEEEEeCC----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 3455566543 4688899877653321 111111111222 25778889999999999999877543
No 276
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=77.24 E-value=44 Score=36.76 Aligned_cols=106 Identities=18% Similarity=0.176 Sum_probs=59.3
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+..||..+.+-...-..+.......++.+ ++..++.|+.++.+.+||..+.+....-..+..
T Consensus 182 ~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 182 KSLLVALTNL----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp CEEEEEEETT----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred CCEEEEEeCC----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 5566666644 4788999987654322111111122222223 578888899999999999988665331111111
Q ss_pred cceeEEEEE-----CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 398 RSTLGVAVL-----NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 398 r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
..-.+++.. ++.+++.|+.+ ..+..||..+++
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 294 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGH 294 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTE
T ss_pred CceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCc
Confidence 111111111 34566666654 468889987665
No 277
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=77.20 E-value=32 Score=36.39 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=60.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeC-CCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSA-PPME 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~-~~~p 395 (1026)
+.+++.|+.+ ..+..||..+.+-... +...... .+++.. ++.+++.|+.++.+.+||..+.+.... ..+.
T Consensus 85 ~~~l~~~~~d----g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 158 (366)
T 3k26_A 85 HPLLAVAGSR----GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE 158 (366)
T ss_dssp CEEEEEEETT----CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT
T ss_pred CCEEEEecCC----CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc
Confidence 4566677654 3788899877653321 1111111 222222 567888999999999999988764332 2112
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
........+.+ ++..++.|+.+ ..+..||+.+.+
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred cccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 12222222333 56677777765 468889987653
No 278
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=77.03 E-value=17 Score=43.45 Aligned_cols=114 Identities=21% Similarity=0.304 Sum_probs=71.4
Q ss_pred eeeEEECCEEEEEeccCCCeEEEeCCCCe--EEeCCCCcCC-----c---ceeEEEEECCEEEEEeccCCCCCCCEEEEE
Q psy9769 359 AGLVFLHEKVYAVGGFNGSLRVYDPSTNE--WSSAPPMEAR-----R---STLGVAVLNSLIYAVGGFDGSSGLNSAEVY 428 (1026)
Q Consensus 359 ~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~~p~~-----r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 428 (1026)
.+-++.++.||+.+. ++.++.+|..|.+ |+.-...+.. + ...+.++.+++||+... + ..+..+
T Consensus 64 ~~P~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g~l~Al 136 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-----GRLEAI 136 (689)
T ss_dssp CCCEEETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----SEEEEE
T ss_pred ecCEEECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----CEEEEE
Confidence 344578999998654 5679999998765 9865433211 0 11234567899988542 2 578999
Q ss_pred ECCCCc--EEEccC-CCCC--cceeEEEEECCEEEEEeC------CCceeeEEcCccc--EEEe
Q psy9769 429 DPSTEK--WNMIAP-MSTR--RSSVGVGVLNGCLYAENL------DGRILGCVKEITD--WGLI 479 (1026)
Q Consensus 429 d~~~~~--W~~~~~-~p~~--r~~~~~~~~~~~lyv~GG------~~~~~~~~~~~~~--W~~~ 479 (1026)
|..|++ |+.-.. -+.. ....+.++.++.+|+-.+ .+.+.-+|..+.+ |+.-
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 137 DAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp ETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 998775 886543 1111 112233567999988543 3567778877644 9765
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=76.69 E-value=16 Score=38.53 Aligned_cols=121 Identities=13% Similarity=0.087 Sum_probs=70.3
Q ss_pred EEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCCCCCC
Q psy9769 346 WQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLN 423 (1026)
Q Consensus 346 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 423 (1026)
.+.+...|.+......++ -++.||+.--.++.+++||+.... ......+ ..-++++.. +|++|+...... ..
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~ 95 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD---SI 95 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT---SC
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC---cc
Confidence 344444444333334443 257899987667789999987643 2221121 122333333 678998764321 13
Q ss_pred EEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEe-CCCceeeEEcC
Q psy9769 424 SAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAEN-LDGRILGCVKE 472 (1026)
Q Consensus 424 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~G-G~~~~~~~~~~ 472 (1026)
.+..||+.+++.+.+...+..+...+.+.. ++.+|+.. +.+.++.++..
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 588999989988877766655554444433 55678775 35556666654
No 280
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=76.27 E-value=44 Score=40.26 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=69.2
Q ss_pred EEEEEeccC-CCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCC----CCCCEEEEEECCCCcEEEccC
Q psy9769 367 KVYAVGGFN-GSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGS----SGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 367 ~iyv~GG~~-~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
.||+.-+.. ..+++=.-.-.+|+.+..+|.....+.++.. ++.+|+..+.... .....+++++-...+|+.+.+
T Consensus 212 ~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~ 291 (737)
T 2cn3_A 212 TIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITP 291 (737)
T ss_dssp CEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCS
T ss_pred EEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccC
Confidence 788753221 1344322234579999877765544544433 7899987653211 123579999999999999987
Q ss_pred CCCC----cceeEEEEE----CCEEEEEeCC-----CceeeEEcCcccEEEe
Q psy9769 441 MSTR----RSSVGVGVL----NGCLYAENLD-----GRILGCVKEITDWGLI 479 (1026)
Q Consensus 441 ~p~~----r~~~~~~~~----~~~lyv~GG~-----~~~~~~~~~~~~W~~~ 479 (1026)
.|.. +++.+...+ .+.||+.+.. ..++.-.+...+|+.+
T Consensus 292 ~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 292 IPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp SCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEEESSTTSSCEES
T ss_pred CCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEEeCCCCccccch
Confidence 6643 344443333 3689988754 3344444556889887
No 281
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=76.10 E-value=14 Score=40.51 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=53.4
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMST 443 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 443 (1026)
++..++.|+.++.+.+||..+.+-...-.- ....-.+++.. ++..++.|+.+ ..+..||+.+++....-....
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~ 207 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLTLSIED 207 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEEEEcCC
Confidence 577888899999999999988764332111 11111222222 56666677655 578899998877543322211
Q ss_pred CcceeEEEEE--CCEEEEEeCCCc
Q psy9769 444 RRSSVGVGVL--NGCLYAENLDGR 465 (1026)
Q Consensus 444 ~r~~~~~~~~--~~~lyv~GG~~~ 465 (1026)
. -.+++.. ++++++.|+.++
T Consensus 208 ~--v~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 208 G--VTTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp C--EEEEEECSTTCCEEEEEETTS
T ss_pred C--cEEEEEECCCCCEEEEEcCCC
Confidence 1 1222222 567777776544
No 282
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=76.08 E-value=21 Score=38.98 Aligned_cols=106 Identities=9% Similarity=0.135 Sum_probs=59.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc-----cccceeeEEEC--CEEEEEeccCC---CeEEEeCCCCeEE
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT-----RRCRAGLVFLH--EKVYAVGGFNG---SLRVYDPSTNEWS 389 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~~--~~iyv~GG~~~---~~~~yd~~~~~W~ 389 (1026)
+.+++.|+.+ ..+..||..+.+....-..+. ...-.+++... ..+++.|+.++ .+.+||..+..-
T Consensus 178 ~~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~- 252 (416)
T 2pm9_A 178 AHVFASAGSS----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT- 252 (416)
T ss_dssp TTEEEEESSS----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-
T ss_pred CcEEEEEcCC----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-
Confidence 4566676654 358889998876543322221 11122233332 35778888877 899999987531
Q ss_pred eCCCCc-CCcceeEEEEE---CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 390 SAPPME-ARRSTLGVAVL---NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 390 ~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
....+. ........+.+ ++.+++.|+.+ ..+..||+.+.+-
T Consensus 253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~~~~~~ 297 (416)
T 2pm9_A 253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNPESAEQ 297 (416)
T ss_dssp CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECSSSCCE
T ss_pred CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeCCCCcc
Confidence 111222 11112222333 67788888765 4688999877654
No 283
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=76.04 E-value=39 Score=36.06 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=37.7
Q ss_pred CcEEEEEcCCC-CCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEECCEEEEEeccCCCeEEEeCCCC
Q psy9769 319 PKVMLVVGGQA-PKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFLHEKVYAVGGFNGSLRVYDPSTN 386 (1026)
Q Consensus 319 ~~~i~v~GG~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~yd~~~~ 386 (1026)
+..+|+.+..+ ....-.+|.+|..+.+.+.+...+..... +.++.-++.+|+.+..++.+.+|+..++
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~ 130 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQD 130 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTT
T ss_pred CCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCC
Confidence 34577766532 11122345566666777776554422222 2233333467777666778899988643
No 284
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.97 E-value=13 Score=45.20 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=59.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
+..++.|+.+ ..+..||..+..-...........-.+++.. ++..++.|+.++.+.+||..+.+-... +..
T Consensus 153 ~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~ 226 (814)
T 3mkq_A 153 PSTFASGCLD----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT--LEG 226 (814)
T ss_dssp EEEEEEEETT----SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE--EEC
T ss_pred CCEEEEEeCC----CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE--EcC
Confidence 4566666644 3688898865432211111111112222222 677888899999999999987663221 111
Q ss_pred CcceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 397 RRSTLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 397 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
......++. -++.+++.||.+ ..+..||+.+.+-.
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSED-----GTLKIWNSSTYKVE 263 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCSEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEE
Confidence 111122222 256677788765 45888998776543
No 285
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.89 E-value=18 Score=39.10 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=58.8
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCcccc-ceeeE-EECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRC-RAGLV-FLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+..||..+.....+........ -.+++ .-++..++.|+.++.+.+||.....-..+.. .
T Consensus 131 ~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---h 203 (383)
T 3ei3_B 131 TNQLFVSSIR----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL---H 203 (383)
T ss_dssp EEEEEEEETT----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC---S
T ss_pred CCEEEEEeCC----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc---C
Confidence 3566666543 468889998776665543221111 12222 2356778889999999999986544333321 1
Q ss_pred cceeEEEEE--CCE-EEEEeccCCCCCCCEEEEEECCC
Q psy9769 398 RSTLGVAVL--NSL-IYAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 398 r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
.....++.+ ++. +++.|+.+ ..+..||+.+
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 236 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVD-----ATVKLWDLRN 236 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETT-----SEEEEEEGGG
T ss_pred CCcEEEEEECCCCCCEEEEEeCC-----CEEEEEeCCC
Confidence 112222233 444 77777765 4788999876
No 286
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.77 E-value=3.9 Score=44.44 Aligned_cols=113 Identities=16% Similarity=0.214 Sum_probs=59.8
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc-EEEccCC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK-WNMIAPM 441 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~ 441 (1026)
++.+++.|+.++.+.+||..++.|.....+........++.+ ++..++.|+.+ ..+..||+.++. |.....+
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEEC
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEe
Confidence 567778888999999999999988887766543333333333 56777777765 458888888776 5443333
Q ss_pred CCCcceeEEEEE--CCEEEEEeCC-CceeeEEcCcc-cEEEeecC
Q psy9769 442 STRRSSVGVGVL--NGCLYAENLD-GRILGCVKEIT-DWGLIIEL 482 (1026)
Q Consensus 442 p~~r~~~~~~~~--~~~lyv~GG~-~~~~~~~~~~~-~W~~~~~l 482 (1026)
.........+.+ +++.++.|+. +.+.-++.... .|.....+
T Consensus 97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 141 (377)
T 3dwl_C 97 LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHL 141 (377)
T ss_dssp CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEE
T ss_pred cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEe
Confidence 222222222222 4555555554 34444444332 24444333
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=75.49 E-value=12 Score=43.72 Aligned_cols=117 Identities=19% Similarity=0.304 Sum_probs=69.5
Q ss_pred CCccCCcEEEEEcCCCCCCCcEEEEEECCCCc--EEEcCCCCcc---cc---ceeeEEECCEEEEEeccCCCeEEEeCCC
Q psy9769 314 QPLRVPKVMLVVGGQAPKAIRSVECYDFKTER--WQSVAEMPTR---RC---RAGLVFLHEKVYAVGGFNGSLRVYDPST 385 (1026)
Q Consensus 314 ~~~~~~~~i~v~GG~~~~~~~~~~~yd~~~~~--W~~~~~~p~~---r~---~~~~~~~~~~iyv~GG~~~~~~~yd~~~ 385 (1026)
.++..++.+|+.... ..++++|..+.+ |+.-...+.. .+ ..+.++.++.||+. ..++.++.+|..|
T Consensus 63 ~P~v~~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~-t~dg~l~AlD~~T 136 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-----SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG-TLDASVVALNKNT 136 (582)
T ss_dssp CCEEETTEEEEEETT-----TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE-ETTTEEEEEESSS
T ss_pred ccEEECCEEEEEcCC-----CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEE-eCCCEEEEEECCC
Confidence 344568888887653 249999987654 8864332221 11 23456788999874 4567899999988
Q ss_pred Ce--EEeCCCCcCCcc--eeEEEEECC------EEEEEeccCC-CCCCCEEEEEECCCCc--EEE
Q psy9769 386 NE--WSSAPPMEARRS--TLGVAVLNS------LIYAVGGFDG-SSGLNSAEVYDPSTEK--WNM 437 (1026)
Q Consensus 386 ~~--W~~~~~~p~~r~--~~~~~~~~~------~iyv~GG~~~-~~~~~~v~~yd~~~~~--W~~ 437 (1026)
.+ |+.-..-+...+ ..+-++.++ .+|+ |...+ ......+..||+.+++ |+.
T Consensus 137 G~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 137 GKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 75 875332211111 112234556 6665 32211 1123689999998776 964
No 288
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=75.47 E-value=19 Score=39.21 Aligned_cols=136 Identities=12% Similarity=0.153 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeC-CCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSA-PPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~-~~~ 394 (1026)
++.+++.|+.+ ..+..||.... ....+..-.. .- .+++. -++..++.|+.++.+.+||..+..-... ...
T Consensus 217 ~~~~l~sgs~D----~~v~~wd~~~~~~~~~~~~~h~~-~v-~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 217 NANMFISGSCD----TTVRLWDLRITSRAVRTYHGHEG-DI-NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp SCCEEEEEETT----SCEEEEETTTTCCCCEEECCCSS-CC-CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred CCCEEEEEECC----CeEEEEECCCCCcceEEECCcCC-Ce-EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 44677777755 35778887532 1111111000 01 12222 2567888999999999999988753321 111
Q ss_pred cC------CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE-EccCCCCCcce--eEEEE-ECCEEEEEeCCC
Q psy9769 395 EA------RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN-MIAPMSTRRSS--VGVGV-LNGCLYAENLDG 464 (1026)
Q Consensus 395 p~------~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~--~~~~~-~~~~lyv~GG~~ 464 (1026)
+. +.....+...++.+++.|+.+ ..+..||..+.+.. .+..+..+... .+++. -++..++.|+.+
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred ccccccccCceEEEEECCCCCEEEEEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 10 111112222367777777655 46889998776643 23222222111 12222 266777777754
Q ss_pred c
Q psy9769 465 R 465 (1026)
Q Consensus 465 ~ 465 (1026)
+
T Consensus 366 ~ 366 (380)
T 3iz6_a 366 K 366 (380)
T ss_dssp S
T ss_pred C
Confidence 4
No 289
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=75.41 E-value=17 Score=37.78 Aligned_cols=111 Identities=8% Similarity=-0.011 Sum_probs=64.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCc---
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPME--- 395 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p--- 395 (1026)
+.+|+++..+ ..+++||+.+. .+.+.. +... -.+++. -+|.+|+.....+.+.+||+.+++...+....
T Consensus 40 ~~l~~~~~~~----~~i~~~~~~~~-~~~~~~-~~~~-~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 40 SAVIFSDVRQ----NRTWAWSDDGQ-LSPEMH-PSHH-QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp TEEEEEEGGG----TEEEEEETTSC-EEEEES-SCSS-EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE
T ss_pred CEEEEEeCCC----CEEEEEECCCC-eEEEEC-CCCC-cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC
Confidence 3477776432 47899999987 665532 2211 123333 35788887655678999999888876553211
Q ss_pred -CCcceeEEEEECCEEEEE----eccC--------CCCCCCEEEEEECCCCcEEEc
Q psy9769 396 -ARRSTLGVAVLNSLIYAV----GGFD--------GSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 396 -~~r~~~~~~~~~~~iyv~----GG~~--------~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
..+....++.-+|++|+. |... .......+++||+. ++...+
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 111122223337889987 4321 01113589999987 555544
No 290
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=74.96 E-value=75 Score=32.13 Aligned_cols=144 Identities=8% Similarity=-0.045 Sum_probs=79.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++.+|+.-.. ...+++||+....-..+.+... ..-+++++. ++.||+.-...+.+.++++....-..+.+...
T Consensus 47 ~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~ 121 (267)
T 1npe_A 47 DKVVYWTDIS----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL 121 (267)
T ss_dssp TTEEEEEETT----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC
T ss_pred CCEEEEEECC----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC
Confidence 4578877532 3578999987764333221111 122344443 57999998777889999987543322211111
Q ss_pred CcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeC-CCceeeEEc
Q psy9769 397 RRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENL-DGRILGCVK 471 (1026)
Q Consensus 397 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG-~~~~~~~~~ 471 (1026)
.+ -.++++. ++.||+..... ....++++++....-+.+..... ....+++.- +++||+.-. .+.+..++.
T Consensus 122 ~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 122 VN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp SS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 11 1233443 68999985321 13678999986544343322111 122333443 578999864 445555655
Q ss_pred C
Q psy9769 472 E 472 (1026)
Q Consensus 472 ~ 472 (1026)
.
T Consensus 197 ~ 197 (267)
T 1npe_A 197 A 197 (267)
T ss_dssp T
T ss_pred C
Confidence 4
No 291
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=74.95 E-value=27 Score=36.72 Aligned_cols=133 Identities=10% Similarity=0.100 Sum_probs=67.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccce-eeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRA-GLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++..++.|+.+ ..+..||..+++-.. .+....... +++. -++.+++.|+.++.+.+||.....-..+..-..
T Consensus 76 dg~~l~s~s~D----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~ 149 (319)
T 3frx_A 76 DGAYALSASWD----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHND 149 (319)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSS
T ss_pred CCCEEEEEeCC----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCC
Confidence 44556666644 478889988765322 111111111 1222 256788889999999999987654333321111
Q ss_pred CcceeEEEEE-------CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCCce
Q psy9769 397 RRSTLGVAVL-------NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDGRI 466 (1026)
Q Consensus 397 ~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~ 466 (1026)
. -.+.... ++..++.||.+ ..+..||+.+.+-.. .+.........+.+ ++++.+.||.++.
T Consensus 150 ~--v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 150 W--VSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp C--EEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred c--EEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 1 1111111 23356666655 458888887654322 11111111122222 5666666765443
No 292
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=74.73 E-value=12 Score=45.76 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=57.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRS 399 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~ 399 (1026)
+..+++|+.+ ..+..||..+.+....-.............-++...++||.++.+.+||..+.+....-... ...
T Consensus 25 ~~~la~~~~~----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~~~ 99 (814)
T 3mkq_A 25 EPWVLTTLYS----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-PDY 99 (814)
T ss_dssp SSEEEEEETT----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC-SSC
T ss_pred CCEEEEEeCC----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecC-CCC
Confidence 3455555533 47889998876544321111111112222235677788888999999999887654321111 111
Q ss_pred eeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 400 TLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 400 ~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
-.+++. -++..++.|+.+ ..+..||..++
T Consensus 100 v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~ 129 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN 129 (814)
T ss_dssp EEEEEECSSSSEEEEEETT-----SEEEEEEGGGT
T ss_pred EEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC
Confidence 112222 256566666654 46889998765
No 293
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=74.39 E-value=22 Score=37.89 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=59.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEE--eCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWS--SAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~--~~~~~p 395 (1026)
++.+++.|+.+ ..+..||..+.+-...........-.+++. -++.+++.|+.++.+.+||..+.+-. .+.. .
T Consensus 138 ~~~~l~s~s~d----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~ 212 (343)
T 3lrv_A 138 NTEYFIWADNR----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-D 212 (343)
T ss_dssp -CCEEEEEETT----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-C
T ss_pred CCCEEEEEeCC----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-c
Confidence 34566667654 368889988776644322222211222333 25788888999999999999876532 2211 1
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.. ....++.+ ++..++.|+ + +.+..||+.+.+
T Consensus 213 h~-~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~ 246 (343)
T 3lrv_A 213 EE-AKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDV 246 (343)
T ss_dssp TT-SCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSST
T ss_pred CC-CCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCC
Confidence 11 12222233 566666666 3 268899987654
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=73.89 E-value=15 Score=44.82 Aligned_cols=135 Identities=7% Similarity=0.026 Sum_probs=77.8
Q ss_pred cEEEEEECCCCcEEEcCCCCcc-ccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCc-----CCcceeEEEE-
Q psy9769 334 RSVECYDFKTERWQSVAEMPTR-RCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPME-----ARRSTLGVAV- 405 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p-----~~r~~~~~~~- 405 (1026)
.-+++||+.+++++.......+ ..-.+++.- +|.||+.. . +-+.+||+.+++|......+ ..+ -.+++.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~d 503 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENF-VRSIAQD 503 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSC-EEEEEEC
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccce-eEEEEEc
Confidence 4688899999988887532111 111222222 57888754 3 56899999998887654222 111 122222
Q ss_pred ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC---CCCCcceeEEEE-ECCEEEEEeCCCce-eeEEcCcccEEEe
Q psy9769 406 LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP---MSTRRSSVGVGV-LNGCLYAENLDGRI-LGCVKEITDWGLI 479 (1026)
Q Consensus 406 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~-~~~~lyv~GG~~~~-~~~~~~~~~W~~~ 479 (1026)
-+|.||+..- . ..+.+||+.+++|+.... +|.... .+++. -++.||+... ++. ..|+..++++...
T Consensus 504 ~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 504 SEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVF 574 (781)
T ss_dssp TTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-TEEEEESCTTTCCCEEE
T ss_pred CCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-CCceEEECCCCCcEEEc
Confidence 2677887532 1 248899999999987653 222211 12222 2678888665 555 6777766655544
No 295
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=73.82 E-value=22 Score=37.04 Aligned_cols=147 Identities=10% Similarity=0.076 Sum_probs=76.6
Q ss_pred CcEEEEEcCC---CCCCCcEEEEEECCCCcEEEcCCC--C-ccccceeeEEE-C-CEEEEEeccCCCeEEEeCCCCeEEe
Q psy9769 319 PKVMLVVGGQ---APKAIRSVECYDFKTERWQSVAEM--P-TRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPSTNEWSS 390 (1026)
Q Consensus 319 ~~~i~v~GG~---~~~~~~~~~~yd~~~~~W~~~~~~--p-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~~W~~ 390 (1026)
++.+|+..+. .......+++||+.++++..+... . ....-++++.. + +.+|+.+. .+.+.+||+. ++...
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~ 105 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEE 105 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEE
Confidence 4567877110 001124789999988888765420 0 11112233332 4 78998764 3368899998 77665
Q ss_pred C-CCCcC--C-cceeEEEE-ECCEEEEEeccCC----------CCCCCEEEEEECCCCcEEEcc-CCCCCcceeEEEEE-
Q psy9769 391 A-PPMEA--R-RSTLGVAV-LNSLIYAVGGFDG----------SSGLNSAEVYDPSTEKWNMIA-PMSTRRSSVGVGVL- 453 (1026)
Q Consensus 391 ~-~~~p~--~-r~~~~~~~-~~~~iyv~GG~~~----------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~- 453 (1026)
+ ..... + ..-.+++. -+|.+|+.....+ ......+++||+. ++...+. .+..+ .+.+..
T Consensus 106 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~ 181 (314)
T 1pjx_A 106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRH 181 (314)
T ss_dssp CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEE
T ss_pred EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEec
Confidence 5 32211 1 11122333 3678998754321 1113579999987 6655432 11111 233333
Q ss_pred ----CC-EEEEEeC-CCceeeEEc
Q psy9769 454 ----NG-CLYAENL-DGRILGCVK 471 (1026)
Q Consensus 454 ----~~-~lyv~GG-~~~~~~~~~ 471 (1026)
++ .+|+... .+.+..|+.
T Consensus 182 ~~d~dg~~l~v~~~~~~~i~~~~~ 205 (314)
T 1pjx_A 182 MNDGRPYQLIVAETPTKKLWSYDI 205 (314)
T ss_dssp CTTSCEEEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEC
Confidence 33 5788753 445555543
No 296
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=73.63 E-value=16 Score=38.40 Aligned_cols=102 Identities=8% Similarity=-0.033 Sum_probs=59.0
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE-ECC-EEEEEeccCCCCCCCEEEEEECCCCcE--EEccC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV-LNS-LIYAVGGFDGSSGLNSAEVYDPSTEKW--NMIAP 440 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~~~ 440 (1026)
.+.+|+.++.++.+.+||+.+++....-+.+ .....++. -++ .+|+.+..+ ..++.||+.+++. ..+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG--YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC--CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc--CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeEEeccc
Confidence 5789999998899999999998875443332 22222222 245 477776533 4899999988874 22222
Q ss_pred CCCCcceeEEEEE--CCEEEEEeCCC---ceeeEEcCccc
Q psy9769 441 MSTRRSSVGVGVL--NGCLYAENLDG---RILGCVKEITD 475 (1026)
Q Consensus 441 ~p~~r~~~~~~~~--~~~lyv~GG~~---~~~~~~~~~~~ 475 (1026)
-..++.. ++.. +..+|+..+.+ .+..++..+.+
T Consensus 82 ~~~~~~~--~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 82 GQSSMAD--VDITPDDQFAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp CSSCCCC--EEECTTSSEEEECCCSSSSCEEEEEETTTTE
T ss_pred CCCCccc--eEECCCCCEEEEecCCCCcccEEEEECCCCC
Confidence 2222221 2222 34677333332 56666665544
No 297
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=73.59 E-value=33 Score=35.92 Aligned_cols=136 Identities=11% Similarity=0.049 Sum_probs=68.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
++.+++.|+.+ ..+..++.........................+..++.|+.++.+.+||.....-..........
T Consensus 97 dg~~l~s~~~d----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 97 DGQFALSGSWD----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS
T ss_pred CCCEEEEEccc----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC
Confidence 34555666644 35777787776554433222222222222334667778888999999998765433222211111
Q ss_pred ceeEEEEE----CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCCCc
Q psy9769 399 STLGVAVL----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDGR 465 (1026)
Q Consensus 399 ~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~ 465 (1026)
....+.+ .+.+++.||.+ ..+..||+.+.+....-.. ....-.+++.. ++++++.|+..+
T Consensus 173 -~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 173 -WVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIG-HTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp -CEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTC
T ss_pred -cccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecC-CCCcEEEEEECCCCCEEEEEeCCC
Confidence 1122222 23466666654 4578899887665332111 11111122222 566666666543
No 298
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=73.41 E-value=25 Score=37.44 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=43.0
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
++..++.|+.++.+.+||..+.+-...........-.+++. -++.+++.|+.+ ..+..||+.+.+-
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTS
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCC
Confidence 56788889999999999998876543322222211222222 367888888765 4688999987653
No 299
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.28 E-value=29 Score=37.43 Aligned_cols=122 Identities=10% Similarity=0.028 Sum_probs=64.4
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCE-EEEEe-ccC----CCeEEEeCCCCeEEeCCCCcCCcceeEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEK-VYAVG-GFN----GSLRVYDPSTNEWSSAPPMEARRSTLGVAV 405 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~G-G~~----~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 405 (1026)
..++.+|..+.+...+... .......+.. ++. |+... +.. ..++.+|..+..+..+.. ..+........
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~ 244 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF 244 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE
Confidence 4688889888877665431 1111222222 243 44443 222 468999998888777654 22122222222
Q ss_pred E--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEe
Q psy9769 406 L--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAEN 461 (1026)
Q Consensus 406 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~G 461 (1026)
+ +|+.+++.+.........++.||+.+++...+..++. .. .+..- ++++++++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEe
Confidence 2 5553333333222222459999999988877665542 12 22233 66666653
No 300
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=73.25 E-value=26 Score=36.88 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=59.6
Q ss_pred cE-EEEEcCCCCCCCcEEEEEEC-CCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCe-------EEe
Q psy9769 320 KV-MLVVGGQAPKAIRSVECYDF-KTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNE-------WSS 390 (1026)
Q Consensus 320 ~~-i~v~GG~~~~~~~~~~~yd~-~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~-------W~~ 390 (1026)
+. .++.|+.+ ..+..||. .+.....+...+....-.+++...+..++.|+.++.+.+||..+.. .+.
T Consensus 68 ~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (342)
T 1yfq_A 68 TDLQIYVGTVQ----GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN 143 (342)
T ss_dssp SSEEEEEEETT----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred CCcEEEEEcCC----CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCe
Confidence 44 56666644 36889999 8887766654112212223333336677788889999999976400 233
Q ss_pred CCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCC
Q psy9769 391 APPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 391 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
+..+..+..-.+++...+. ++.|+.+ ..+..||..+
T Consensus 144 ~~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 144 SNNTKVKNKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp SSSSSSCCCEEEEEECSSE-EEEEEST-----TEEEEEESSC
T ss_pred eeEEeeCCceEEEEecCCc-EEEEeCC-----CeEEEEECCc
Confidence 3333333333344444555 5556544 5788999877
No 301
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.16 E-value=38 Score=35.71 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=58.4
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCc--EEEcCCCCccccceeeE-------EECCEEEEEeccCCCeEEEeCCCCe--EE
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTER--WQSVAEMPTRRCRAGLV-------FLHEKVYAVGGFNGSLRVYDPSTNE--WS 389 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~yd~~~~~--W~ 389 (1026)
.+++.|+.+ ..+..||..+.. ...+.....+. .++. .-++..++.|+.++.+.+||..+.. ..
T Consensus 81 ~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 81 RYLATGDFG----GNLHIWNLEAPEMPVYSVKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp CCEEEEETT----SCEEEECTTSCSSCSEEECCCSSCE--EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred ceEEEecCC----CeEEEEeCCCCCccEEEEEecccce--EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 555666543 357888887654 12222111111 1111 2356677889999999999998764 23
Q ss_pred eCCCCcC--CcceeEEE-----EECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 390 SAPPMEA--RRSTLGVA-----VLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 390 ~~~~~p~--~r~~~~~~-----~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.+..... .+...+++ .-++.+++.|+.+ ..+..||+.+.+-.
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALR 203 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEE
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCcee
Confidence 3322211 22222222 1467777777754 47899999887653
No 302
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=73.04 E-value=8.2 Score=43.14 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=58.3
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccc-cceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRR-CRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+.+||..++....+....... ...+++. -++.+++.|+.++.+.+||..... +..+..-
T Consensus 177 ~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~~~h 249 (435)
T 4e54_B 177 TNQFYASSME----GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNLRMH 249 (435)
T ss_dssp TTEEEEECSS----SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCSBCC
T ss_pred CCEEEEEeCC----CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEEecc
Confidence 4456666654 35788898877665543322211 1222333 357788899999999999987643 2222211
Q ss_pred cceeEEEEE--C-CEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 398 RSTLGVAVL--N-SLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 398 r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
.....++.+ + ..+++.|+.+ ..+..||..+..
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~ 284 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVR 284 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCC
T ss_pred cceEEeeeecCCCceEEEEecCc-----ceeeEEeccccc
Confidence 122223333 2 3477777765 346678876543
No 303
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.10 E-value=16 Score=38.42 Aligned_cols=138 Identities=18% Similarity=0.346 Sum_probs=73.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECC-CCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCC-eEEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFK-TERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTN-EWSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~-~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~-~W~~~~~~p 395 (1026)
++.+|+... ...+++||+. ...|..-.+ .+. ..+.+.. ++.||+ |..++.++.||+... .|....+
T Consensus 107 ~~~l~v~t~-----~~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~~~~g~l~v-gt~~~~l~~~d~~g~~~~~~~~~-- 175 (330)
T 3hxj_A 107 EDILYVTSM-----DGHLYAINTDGTEKWRFKTK--KAI-YATPIVSEDGTIYV-GSNDNYLYAINPDGTEKWRFKTN-- 175 (330)
T ss_dssp TTEEEEECT-----TSEEEEECTTSCEEEEEECS--SCC-CSCCEECTTSCEEE-ECTTSEEEEECTTSCEEEEEECS--
T ss_pred CCEEEEEec-----CCEEEEEcCCCCEEEEEcCC--Cce-eeeeEEcCCCEEEE-EcCCCEEEEECCCCCEeEEEecC--
Confidence 566766432 2468899987 345665332 111 2223344 677776 555678999999822 3765322
Q ss_pred CCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCC-CcEEEccCCCCCcceeEEEEE-CCEEEEEeCCCceeeEEcC
Q psy9769 396 ARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPST-EKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 396 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 472 (1026)
.+.. .+.+. -++.||+.. ..+.+||+.. ..|+.....+ . ..+.+.. ++.||+....+.+..++..
T Consensus 176 ~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 176 DAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSLDGHLYAINPD 243 (330)
T ss_dssp SCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEETTTEEEEECTT
T ss_pred CCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcCCCeEEEECCC
Confidence 1111 12233 367788754 3578888532 3476543221 1 1122233 4588887655667777543
Q ss_pred ccc-EEEe
Q psy9769 473 ITD-WGLI 479 (1026)
Q Consensus 473 ~~~-W~~~ 479 (1026)
... |..-
T Consensus 244 g~~~~~~~ 251 (330)
T 3hxj_A 244 GTEKWRFK 251 (330)
T ss_dssp SCEEEEEE
T ss_pred CCEeEEee
Confidence 322 6543
No 304
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=71.64 E-value=5 Score=43.89 Aligned_cols=107 Identities=17% Similarity=0.274 Sum_probs=58.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCC----------CC-ccccc-eeeEEE--CCEEEEEeccCCCeEEEeCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAE----------MP-TRRCR-AGLVFL--HEKVYAVGGFNGSLRVYDPS 384 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~----------~p-~~r~~-~~~~~~--~~~iyv~GG~~~~~~~yd~~ 384 (1026)
++.+++.|+.+ ..+..||..+........ .+ ..... .+++.. ++.+++.|+.++.+.+||..
T Consensus 55 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 130 (408)
T 4a11_B 55 EGRYMLSGGSD----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN 130 (408)
T ss_dssp TCCEEEEEETT----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCC----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC
Confidence 34566666654 357888887654322110 00 01111 222222 55688889999999999999
Q ss_pred CCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 385 TNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 385 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+......-..+.+......... ++.+++.|+.+ ..+..||+.+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~ 177 (408)
T 4a11_B 131 TLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGS 177 (408)
T ss_dssp TTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSC
T ss_pred CCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcc
Confidence 8775443333222222111111 34477777765 468889987654
No 305
>2k5n_A Putative cold-shock protein; GFT protein structure, PSI, nesgc, OB fold, cold shock structural genomics; NMR {Pectobacterium atrosepticum}
Probab=71.60 E-value=11 Score=30.36 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=34.1
Q ss_pred EEEEEEEEE---ecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEE
Q psy9769 952 LVWGVLKEK---MPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 952 ~v~G~V~~i---~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
..+|+|+.. +-||-+..-.++=+ |+|.++|.... .+++||.|++.|..
T Consensus 2 ~~~G~Vkwfn~~KGfGFI~~~dg~~d-FvH~s~i~~~g------~l~~G~~V~F~~~~ 52 (74)
T 2k5n_A 2 AMNGTITTWFKDKGFGFIKDENGDNR-YFHVIKVANPD------LIKKDAAVTFEPTT 52 (74)
T ss_dssp CEEEEEEEEETTTTEEEEEESSSCEE-EEEGGGBSSGG------GCCTTCEEEEEEEE
T ss_pred CcceEEEEEECCCCeEEEecCCCCce-EEEHhHcccCC------CCCCCCEEEEEEEe
Confidence 357999987 34554444344556 99999996533 57899999998864
No 306
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=71.53 E-value=25 Score=37.33 Aligned_cols=138 Identities=8% Similarity=0.036 Sum_probs=71.2
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEEE-CC-EEEEEeccCCCeEEEeCC-CCeEEeCCC-
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVFL-HE-KVYAVGGFNGSLRVYDPS-TNEWSSAPP- 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~yd~~-~~~W~~~~~- 393 (1026)
++.+|+.+... ....++.||..+.+++.+...+..... ..++.. ++ .+|+.+..++.+.+||.. +.+...+..
T Consensus 50 dg~l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~ 127 (347)
T 3hfq_A 50 KDCLYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTV 127 (347)
T ss_dssp TCEEEEEEEET--TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred CCeEEEEEecC--CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeeccee
Confidence 45577765321 125788999988888776543222222 223333 34 687776566788888874 333332211
Q ss_pred -----CcCCcc----eeEEEE-ECCEEEEEeccCCCCCCCEEEEEECC-CCcEEEccC--CCCCcceeEEEEE-CC-EEE
Q psy9769 394 -----MEARRS----TLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPS-TEKWNMIAP--MSTRRSSVGVGVL-NG-CLY 458 (1026)
Q Consensus 394 -----~p~~r~----~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--~p~~r~~~~~~~~-~~-~ly 458 (1026)
-|.+|. -++++. -+|++|+.+..+ +.+..||+. +++...... .+.......++.. ++ .+|
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 111111 222232 267777765432 578899987 566654432 2211111122222 44 588
Q ss_pred EEeCC
Q psy9769 459 AENLD 463 (1026)
Q Consensus 459 v~GG~ 463 (1026)
+.+..
T Consensus 203 v~~~~ 207 (347)
T 3hfq_A 203 LAGEL 207 (347)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 87643
No 307
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=71.50 E-value=15 Score=38.65 Aligned_cols=103 Identities=11% Similarity=0.134 Sum_probs=56.8
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcc
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRS 399 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~ 399 (1026)
.+++.||.+ ..+..||..+.+....-..... .-.+++. -++.+++.|+.++.+.+||..+..-.. .+.....
T Consensus 186 ~~~~s~~~d----~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~--~~~~~~~ 258 (340)
T 4aow_A 186 PIIVSCGWD----KLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY--TLDGGDI 258 (340)
T ss_dssp CEEEEEETT----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE--EEECSSC
T ss_pred cEEEEEcCC----CEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee--eecCCce
Confidence 455556543 3577888887654332111111 1112222 257788889999999999998765322 2222222
Q ss_pred eeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 400 TLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 400 ~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
-.+++...+..++.|+.+ ..+..||..+..-
T Consensus 259 v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~ 289 (340)
T 4aow_A 259 INALCFSPNRYWLCAATG-----PSIKIWDLEGKII 289 (340)
T ss_dssp EEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred EEeeecCCCCceeeccCC-----CEEEEEECCCCeE
Confidence 223333344455666654 4688888877653
No 308
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=71.39 E-value=57 Score=38.32 Aligned_cols=139 Identities=15% Similarity=0.039 Sum_probs=76.6
Q ss_pred cEEEEEECC-CC---cEEEcCCCCccccceeeEE-ECCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCc----c---
Q psy9769 334 RSVECYDFK-TE---RWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARR----S--- 399 (1026)
Q Consensus 334 ~~~~~yd~~-~~---~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r----~--- 399 (1026)
..++.+|.. +. ....+..-.. ......+. -+|++|+.+..++ .++.+|+.+.+|..+.+..... .
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT
T ss_pred cEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc
Confidence 579999998 56 3444332111 11122222 2677888877666 6888999888898775432211 0
Q ss_pred eeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEE-EEECCEEEEEeC-CC---ceeeEEcCc
Q psy9769 400 TLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGV-GVLNGCLYAENL-DG---RILGCVKEI 473 (1026)
Q Consensus 400 ~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~lyv~GG-~~---~~~~~~~~~ 473 (1026)
....+.. ++++++.+.. ....++.+|+.++..+.+..-. . ...+. ..-++.+++..+ .. .++.++..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~~~-~-~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAGPW-T-EWAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp CCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCSSC-C-EEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred CceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecCCC-C-eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 1122333 6777777654 2468889999888877764321 1 11222 334666665543 22 233344444
Q ss_pred ccEEEe
Q psy9769 474 TDWGLI 479 (1026)
Q Consensus 474 ~~W~~~ 479 (1026)
.+...+
T Consensus 370 g~~~~l 375 (662)
T 3azo_A 370 GRARTI 375 (662)
T ss_dssp CCEEEE
T ss_pred CceEEe
Confidence 444444
No 309
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=71.18 E-value=4.7 Score=46.31 Aligned_cols=83 Identities=8% Similarity=0.110 Sum_probs=60.4
Q ss_pred EEEEECCEEEEEEhhhhhccChhh-Hhhhc--CCccCcccEEEecCCCHHHHHHHhhheec-ceeeechhh-HHHHHHHH
Q psy9769 68 VKLIADGVEVAAHKMVLAACSPYF-HAMFI--SFEESKQERIVLKGVDPNALKLLIDYVYS-CEIYVTEEN-VQMLLPAA 142 (1026)
Q Consensus 68 v~i~v~~~~~~~Hr~vL~~~S~yF-~~mf~--~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt-g~~~i~~~~-v~~ll~~A 142 (1026)
|+|.|+|+.|...+..|.....-+ .+|+. .......+++-+ |=++..|+.+|+|+.+ |++.++.+- ...+++-|
T Consensus 54 v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~ 132 (514)
T 2r9r_B 54 VVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEI 132 (514)
T ss_dssp EEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHH
Confidence 788899999999999997643221 12222 112234456766 5799999999999999 998776654 45578899
Q ss_pred HhcCchhHH
Q psy9769 143 NLLQLTDVR 151 (1026)
Q Consensus 143 ~~l~l~~L~ 151 (1026)
++|+++++.
T Consensus 133 ~f~~i~~~~ 141 (514)
T 2r9r_B 133 RFYELGEEA 141 (514)
T ss_dssp HHTTCCHHH
T ss_pred HhcCCCHHH
Confidence 999997754
No 310
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=70.81 E-value=71 Score=33.45 Aligned_cols=146 Identities=16% Similarity=0.208 Sum_probs=75.7
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEEC----CEEEEEeccCCCeEEEeCCCCe--EEeCCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLH----EKVYAVGGFNGSLRVYDPSTNE--WSSAPP 393 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~yd~~~~~--W~~~~~ 393 (1026)
..+++.|+.. ..-..+..||..+.+............-.+++... +.+++.|+.++.+.+||..+.. ...+..
T Consensus 31 ~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 31 AKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp SEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred ceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe
Confidence 3566666541 11247888998887765443322221222222222 4788889999999999998765 122221
Q ss_pred CcCCcceeEEE-------EECCEEEEEeccCCCCCCCEEEEEECCCCc--EEEccCCCC--CcceeEEE-----EECCEE
Q psy9769 394 MEARRSTLGVA-------VLNSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIAPMST--RRSSVGVG-----VLNGCL 457 (1026)
Q Consensus 394 ~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~-----~~~~~l 457 (1026)
...+ -.++. .-++..++.|+.+ ..+..||+.+.. ...+..... .+.-.+++ .-++.+
T Consensus 110 ~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (357)
T 3i2n_A 110 HKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV 182 (357)
T ss_dssp CSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE
T ss_pred cccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE
Confidence 1111 11111 1356677777765 468889987764 333332221 11222222 135666
Q ss_pred EEEeCC-CceeeEEcCc
Q psy9769 458 YAENLD-GRILGCVKEI 473 (1026)
Q Consensus 458 yv~GG~-~~~~~~~~~~ 473 (1026)
++.|+. +.+.-++..+
T Consensus 183 l~~~~~d~~i~i~d~~~ 199 (357)
T 3i2n_A 183 VCAGYDNGDIKLFDLRN 199 (357)
T ss_dssp EEEEETTSEEEEEETTT
T ss_pred EEEEccCCeEEEEECcc
Confidence 666664 4555555544
No 311
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=70.67 E-value=41 Score=36.25 Aligned_cols=101 Identities=10% Similarity=0.030 Sum_probs=57.0
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCc-------EEEcCCCCccccceeeEE-EC----C---EEEEEeccCCCeEEEeCCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTER-------WQSVAEMPTRRCRAGLVF-LH----E---KVYAVGGFNGSLRVYDPST 385 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~-~~----~---~iyv~GG~~~~~~~yd~~~ 385 (1026)
.+++.|+.+ ..+..||..+.. ...+.....+ -.+++. -+ + .+++.|+.++.+.+||..+
T Consensus 27 ~~l~s~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~ 100 (397)
T 1sq9_A 27 SFTVSCSGD----GYLKVWDNKLLDNENPKDKSYSHFVHKSG--LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITR 100 (397)
T ss_dssp SEEEEEETT----SEEEEEESBCCTTCCGGGGEEEEECCTTC--EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE
T ss_pred CeEEEEcCC----CEEEEEECCCcccccCCCcceEEecCCCc--EEEEEEecccccCCccccEEEEEcCCCCEEEEEccC
Confidence 455666543 478888888765 2222211111 122222 24 6 8888999999999999887
Q ss_pred Ce------EEeCCCCcCC---cceeEEEE-----ECCEE-EEEeccCCCCCCCEEEEEECCC
Q psy9769 386 NE------WSSAPPMEAR---RSTLGVAV-----LNSLI-YAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 386 ~~------W~~~~~~p~~---r~~~~~~~-----~~~~i-yv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
.. +..+...+.. ..-.+++. -++.. ++.|+.+ ..+..||..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 157 (397)
T 1sq9_A 101 EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHP 157 (397)
T ss_dssp CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEES
T ss_pred CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCc
Confidence 76 6666544311 11222333 34666 7777765 3577777655
No 312
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=70.62 E-value=29 Score=36.32 Aligned_cols=65 Identities=12% Similarity=-0.000 Sum_probs=40.1
Q ss_pred EEEEEeccCCCeEEEeCCCCeEEeCCCCcCC--cceeEEEEECC-EEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 367 KVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR--RSTLGVAVLNS-LIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 367 ~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.+++.++.++.+.+||+.+.+....-+++.. +....+..-++ .+|+.++.+ ..+..||+.+++-.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETL 69 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeE
Confidence 4677788888999999988765432222221 11122222244 678776532 57999999887754
No 313
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=70.54 E-value=31 Score=37.42 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=58.0
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcC--CCCcccc-c-eeeEE--ECCEEEEEeccCCCeEEEeCCCCe--EEeCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVA--EMPTRRC-R-AGLVF--LHEKVYAVGGFNGSLRVYDPSTNE--WSSAP 392 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~-~-~~~~~--~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~ 392 (1026)
..++.|+.+ ..+..||..+.+-...- ..+.... . .+++. .++.+++.|+.++.+.+||..... -..+.
T Consensus 171 ~~l~s~s~D----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~ 246 (380)
T 3iz6_a 171 TRLITGSGD----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH 246 (380)
T ss_dssp SCEEEECTT----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC
T ss_pred CEEEEECCC----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC
Confidence 344555543 36788998887654321 1222111 1 11222 267889999999999999986321 11111
Q ss_pred CCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 393 PMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 393 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
.-.. . -.+++. -++..++.|+.+ ..+..||+.++.-.
T Consensus 247 ~h~~-~-v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 247 GHEG-D-INSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQL 284 (380)
T ss_dssp CCSS-C-CCEEEECTTSSEEEEECSS-----SCEEEEETTTTEEE
T ss_pred CcCC-C-eEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEE
Confidence 1111 1 112222 266777888766 45888998877543
No 314
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=70.53 E-value=27 Score=37.79 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=56.6
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
.+++.|+.+ ..+..||..+.........+.+....+.... ++.+++.|+.++.+.+||..+.+... .+....
T Consensus 113 ~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~~ 186 (408)
T 4a11_B 113 GMFTSSSFD----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH--ILQGHR 186 (408)
T ss_dssp TCEEEEETT----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE--EECCCC
T ss_pred cEEEEEeCC----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee--eecCCC
Confidence 355555543 4688899888765544333322222111111 44588889999999999998764321 111111
Q ss_pred ceeEEEEE--CCE-EEEEeccCCCCCCCEEEEEECCCC
Q psy9769 399 STLGVAVL--NSL-IYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 399 ~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
....+..+ ++. +++.|+.+ ..+..||+.+.
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~ 219 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASAD-----SRVKLWDVRRA 219 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCS
T ss_pred CcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCC
Confidence 12222222 333 77888765 35888888654
No 315
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=70.43 E-value=10 Score=39.72 Aligned_cols=70 Identities=11% Similarity=0.213 Sum_probs=44.2
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE----CCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
+|+..+.||.++.+.+||..+.+...+..+..-...-.++.+ ++.+++.|+.+ ..+..||+.++.|..+.
T Consensus 20 ~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 20 YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRWSQIA 93 (297)
T ss_dssp TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCBCCCE
T ss_pred CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCceEEEE
Confidence 567788899999999999876544332222211111222333 26777888765 57889999888776544
No 316
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=70.14 E-value=48 Score=35.00 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=54.0
Q ss_pred EEEEEECCCCcE-EEcCCCC---ccccceee-EEEC----CEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE
Q psy9769 335 SVECYDFKTERW-QSVAEMP---TRRCRAGL-VFLH----EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV 405 (1026)
Q Consensus 335 ~~~~yd~~~~~W-~~~~~~p---~~r~~~~~-~~~~----~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 405 (1026)
.+..||..+... ..+.... ....-.++ ...+ +.+++.|+.++.+.+||..+.+-.. .+........++.
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~ 122 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK--HYVGHGNAINELK 122 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE--EEESCCSCEEEEE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee--eecCCCCcEEEEE
Confidence 688888875543 2222211 11111222 2234 5788999999999999998765322 1111111122222
Q ss_pred E---CCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 406 L---NSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 406 ~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
+ ++.+++.|+.+ ..+..||+.+++..
T Consensus 123 ~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 151 (366)
T 3k26_A 123 FHPRDPNLLLSVSKD-----HALRLWNIQTDTLV 151 (366)
T ss_dssp ECSSCTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred ECCCCCCEEEEEeCC-----CeEEEEEeecCeEE
Confidence 2 56778888765 46889999877654
No 317
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.57 E-value=19 Score=46.44 Aligned_cols=105 Identities=10% Similarity=0.173 Sum_probs=59.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
++..++.||.+ ..+..||..+.+.... +........++.+ ++...+.||.++.+.+||..+.+.... +..
T Consensus 626 ~~~~l~s~~~d----~~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~--~~~ 697 (1249)
T 3sfz_A 626 DGQRIASCGAD----KTLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHT--YDE 697 (1249)
T ss_dssp TSSEEEEEETT----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EEC
T ss_pred CCCEEEEEeCC----CeEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEE--EcC
Confidence 44555666643 3688899887654321 1211111122222 567778888899999999988764321 111
Q ss_pred CcceeEEEEE----CCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 397 RRSTLGVAVL----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 397 ~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
......++.+ ++.+++.|+.+ ..+..||+.++...
T Consensus 698 ~~~~v~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECR 736 (1249)
T ss_dssp CSSCEEEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEE
T ss_pred CCCcEEEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchh
Confidence 1112222333 33456666654 45889998877653
No 318
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=69.56 E-value=78 Score=33.56 Aligned_cols=98 Identities=11% Similarity=0.125 Sum_probs=52.5
Q ss_pred EEEEEeccCCCeEEEeCCCCeEEeCC---CCcCCcceeEEEEE--CC-EEEEEeccCCCCCCCEEEEEEC--CCCcEEEc
Q psy9769 367 KVYAVGGFNGSLRVYDPSTNEWSSAP---PMEARRSTLGVAVL--NS-LIYAVGGFDGSSGLNSAEVYDP--STEKWNMI 438 (1026)
Q Consensus 367 ~iyv~GG~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~--~~~~W~~~ 438 (1026)
.+|+.+..++.+.+||..++++..+. ..+..........+ +| .||+.+.. + .+.+..|+. .+++++.+
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~---~~~i~v~~~~~~~g~~~~~ 299 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-K---ADGVAIFKVDETNGTLTKV 299 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-S---SCEEEEEEECTTTCCEEEE
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-C---CCEEEEEEEcCCCCcEEEe
Confidence 68888766788999998887775443 22322222223333 55 46665432 0 145666655 57787766
Q ss_pred cCCCCCcceeEEEEE-CC-EEEEEeC-CCceee
Q psy9769 439 APMSTRRSSVGVGVL-NG-CLYAENL-DGRILG 468 (1026)
Q Consensus 439 ~~~p~~r~~~~~~~~-~~-~lyv~GG-~~~~~~ 468 (1026)
...+......+++.. ++ .||+.+. .+.+..
T Consensus 300 ~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v 332 (361)
T 3scy_A 300 GYQLTGIHPRNFIITPNGKYLLVACRDTNVIQI 332 (361)
T ss_dssp EEEECSSCCCEEEECTTSCEEEEEETTTTEEEE
T ss_pred eEecCCCCCceEEECCCCCEEEEEECCCCCEEE
Confidence 654432222233333 44 5777763 344444
No 319
>2nn6_G Exosome complex exonuclease RRP40; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2 d.51.1.1
Probab=69.50 E-value=3 Score=43.48 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=45.3
Q ss_pred ccccCcccccccccccccceeeeecccceeeeeeccc-----------cccCceEEEEEeeeeec
Q psy9769 561 TLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKYDS-----------VILGQIVTCMISKIKVA 614 (1026)
Q Consensus 561 ~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~~~-----------~~~G~~v~~~v~~~~~~ 614 (1026)
..++|++|-|.|.++..+.+.|+|+. ...|+||..+ |++|+.|.|+|++++..
T Consensus 124 iP~vGDiVIG~Vt~v~~~~~~VdI~s-~~~a~L~~~~f~Gatk~~r~~f~~GDlV~ArV~s~~~~ 187 (289)
T 2nn6_G 124 VPVKGDHVIGIVTAKSGDIFKVDVGG-SEPASLSYLSFEGATKRNRPNVQVGDLIYGQFVVANKD 187 (289)
T ss_dssp CCCSSEEEEEEEEEEETTEEEEECSS-SSCCCEESCSSSCCSSCSSSSSCTTCEEEEEEEECCTT
T ss_pred CCCCCCEEEEEEEEEeCcEEEEEECC-CceeEEehhhcCcchhhhhhhcCCCCEEEEEEEEcCCC
Confidence 45789999999999999999999974 4678888532 88999999999998765
No 320
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=68.53 E-value=12 Score=39.76 Aligned_cols=69 Identities=13% Similarity=0.076 Sum_probs=44.7
Q ss_pred ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEECCCCcEEE
Q psy9769 364 LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNM 437 (1026)
Q Consensus 364 ~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 437 (1026)
.++.+|+.++.++.+++||+.+.+....-+.+.....+..+.. ++ .+|+.+..+ ..+..||+.+++...
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEE
Confidence 4678999999999999999998875432222221012233332 44 577776432 579999998887543
No 321
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=68.51 E-value=24 Score=38.98 Aligned_cols=91 Identities=14% Similarity=0.167 Sum_probs=52.6
Q ss_pred ccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEE
Q psy9769 373 GFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGV 450 (1026)
Q Consensus 373 G~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 450 (1026)
|.++++++||..+++...+-.+......-.++.+ +|..++.|+.+ ..+..||..+++-... +........+
T Consensus 122 gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~h~~~v~~ 194 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTSHSARVGS 194 (420)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEE
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEE--EeCCCCceEE
Confidence 4577888889998876554333322222233333 67788888866 4688999887764322 2212222334
Q ss_pred EEECCEEEEEeCCCceeeEE
Q psy9769 451 GVLNGCLYAENLDGRILGCV 470 (1026)
Q Consensus 451 ~~~~~~lyv~GG~~~~~~~~ 470 (1026)
...++.+.+.|+........
T Consensus 195 ~s~~~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 195 LSWNSYILSSGSRSGHIHHH 214 (420)
T ss_dssp EEEETTEEEEEETTSEEEEE
T ss_pred EeeCCCEEEEEeCCCceeEe
Confidence 45566677777655444433
No 322
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=68.40 E-value=39 Score=38.95 Aligned_cols=155 Identities=14% Similarity=0.083 Sum_probs=81.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEE-cCC--C--------CccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCe
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQS-VAE--M--------PTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNE 387 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~-~~~--~--------p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~ 387 (1026)
+.+|+.+.. ...+..+|..+.+-.. ++. + |.+|....+... ++.+|+.+..++.++++|..+.+
T Consensus 238 ~~l~v~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 238 RYTIAGAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp TEEEEEEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred CEEEEEEcc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 455554321 2467788887765332 111 1 122222222222 46777777777899999987643
Q ss_pred EEeCCCCcCCcceeEEEE-ECCE-EEEEeccCCCCCCCEEEEEECCCCcEEEc---cCCCCCcceeEEEEE--CCEEEEE
Q psy9769 388 WSSAPPMEARRSTLGVAV-LNSL-IYAVGGFDGSSGLNSAEVYDPSTEKWNMI---APMSTRRSSVGVGVL--NGCLYAE 460 (1026)
Q Consensus 388 W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~--~~~lyv~ 460 (1026)
-..+..++..+.-+..+. -+++ +|+.+..+ +.+.++|+.+++-... ...|.+..+... .. ++.+|+.
T Consensus 314 ~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~-----~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s 387 (543)
T 1nir_A 314 NLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS-----NKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWST 387 (543)
T ss_dssp SCEEEEEECCSSCCCEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEE
T ss_pred cceeEEeccCcCccCceECCCCCEEEEEecCC-----CeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEe
Confidence 211111222222223333 2454 55554322 5788999998875432 234444333332 23 3788888
Q ss_pred eC--CCceeeEEcCc-----ccEEEeecCCC
Q psy9769 461 NL--DGRILGCVKEI-----TDWGLIIELPN 484 (1026)
Q Consensus 461 GG--~~~~~~~~~~~-----~~W~~~~~lP~ 484 (1026)
+. .+.+..++..+ ..|..+..++.
T Consensus 388 ~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 388 SHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp EBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred ccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 73 45555565543 23887777654
No 323
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=68.34 E-value=49 Score=34.37 Aligned_cols=137 Identities=15% Similarity=0.188 Sum_probs=69.3
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCC-------cEEEcCCCCccccceeeEEE--C--CEEEEEeccCCCeEEEeCCCCe-
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTE-------RWQSVAEMPTRRCRAGLVFL--H--EKVYAVGGFNGSLRVYDPSTNE- 387 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~yd~~~~~- 387 (1026)
+.+++.|+.+ ..+..||..+. .|..+..+.........+.+ + +..++.|+.++.+.+||..+.+
T Consensus 71 ~~~l~s~~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 71 GRIIASASYD----KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp CSEEEEEETT----SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred CCEEEEEcCC----CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 4566666654 35777777653 34444333222222222222 2 6778888999999999987654
Q ss_pred ---EEe-----CCCC-cCCc-ceeEEEEE-----CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCccee-EEE
Q psy9769 388 ---WSS-----APPM-EARR-STLGVAVL-----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSV-GVG 451 (1026)
Q Consensus 388 ---W~~-----~~~~-p~~r-~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~ 451 (1026)
|.. .... +... ....+..+ ++..++.|+.+ ..+..++...+.+..+..++...... +++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE-----QAIIYQRGKDGKLHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT-----EEEEEEECTTSCEEEEEECCCCCSCEEEEE
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC-----CcEEEEccCCCceeeeeecCCCCcceeEEE
Confidence 321 0011 1111 11122222 26677777755 34455666666665554444332222 233
Q ss_pred EE-CC----EEEEEeCCCc
Q psy9769 452 VL-NG----CLYAENLDGR 465 (1026)
Q Consensus 452 ~~-~~----~lyv~GG~~~ 465 (1026)
.. ++ .+++.|+.++
T Consensus 222 ~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp ECCCSSCSSEEEEEEETTS
T ss_pred ECCCCCCcceEEEEEcCCC
Confidence 33 33 6777776543
No 324
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=68.08 E-value=46 Score=34.95 Aligned_cols=131 Identities=11% Similarity=-0.000 Sum_probs=70.9
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-C-CEEEEEeccCCCeEEEeCCCC---eEEeCCCCcCCcceeEEEEE-C
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-H-EKVYAVGGFNGSLRVYDPSTN---EWSSAPPMEARRSTLGVAVL-N 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~ 407 (1026)
..+++||+.+.+...+.. .......++.- + +.||+.-..++.+++|++... +++....++. -..++.- +
T Consensus 165 g~v~~~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~ 239 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK--ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNAD 239 (322)
T ss_dssp EEEEEEETTTTEEEEEEE--EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTT
T ss_pred ceEEEEeCCCCEEEEecc--CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CCCeEECCC
Confidence 568999998877654421 11111233333 3 369998666678999998752 3333322222 1223332 5
Q ss_pred CEEEEEeccCCC-----CCCCEEEEEECCCCcEEEccCCCC---CcceeEEEEECCEEEEEeC-CCceeeEE
Q psy9769 408 SLIYAVGGFDGS-----SGLNSAEVYDPSTEKWNMIAPMST---RRSSVGVGVLNGCLYAENL-DGRILGCV 470 (1026)
Q Consensus 408 ~~iyv~GG~~~~-----~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~lyv~GG-~~~~~~~~ 470 (1026)
|.||+....... .....+.+||+....-..+.. |. .....+++..+++|||.+. .+.+..|+
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILV 310 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSSCSEEEEEE
T ss_pred CCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecCCCceEEEe
Confidence 789988543100 012568999997544444332 21 1222344456899999864 33444444
No 325
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=68.06 E-value=0.79 Score=50.58 Aligned_cols=108 Identities=10% Similarity=0.052 Sum_probs=44.8
Q ss_pred EEECCEEEEEeccCCCeEEEeCCCCe--EEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCC--cEEE
Q psy9769 362 VFLHEKVYAVGGFNGSLRVYDPSTNE--WSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTE--KWNM 437 (1026)
Q Consensus 362 ~~~~~~iyv~GG~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~ 437 (1026)
++.++.+|+ |+.++.++.+|..+.+ |+.-. .... .+.+..++.+|+.|+.+ ..++++|..++ .|..
T Consensus 6 ~v~~~~v~~-gs~dg~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 6 TLPETLLFV-STLDGSLHAVSKRTGSIKWTLKE--DPVL--QVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp --CTTEEEE-EETTSEEEEEETTTCCEEEEEEC--CCSC--CCC-----CCEEECTTT-----CCEEEC-----CCSEEC
T ss_pred eeeCCEEEE-EcCCCEEEEEECCCCCEEEEecC--CCce--ecceEcCCCEEEEeCCC-----CEEEEEECCCCceeeee
Confidence 445667765 5667889999988764 87543 1111 22234567788876543 45889998654 4764
Q ss_pred ccCCCCCcceeEEEEECCEEEEEeCCCceeeEEcCc--ccEEEe
Q psy9769 438 IAPMSTRRSSVGVGVLNGCLYAENLDGRILGCVKEI--TDWGLI 479 (1026)
Q Consensus 438 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~--~~W~~~ 479 (1026)
-...+.......+...++.+|+-+..+.+..+|..+ ..|..-
T Consensus 76 ~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~ 119 (369)
T 2hz6_A 76 PFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS 119 (369)
T ss_dssp SCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC---------
T ss_pred eccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEec
Confidence 222111111101111355666544444555555554 336544
No 326
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=67.18 E-value=53 Score=34.65 Aligned_cols=139 Identities=14% Similarity=0.035 Sum_probs=73.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC---
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA--- 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~--- 396 (1026)
+.+|+++.. ...+++||+.++....+. .+. .....+..-+|.+|+.. ...+++||+.+.+++.+...+.
T Consensus 61 ~~l~~~d~~----~~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~ 132 (326)
T 2ghs_A 61 GTAWWFNIL----ERELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAELESDLP 132 (326)
T ss_dssp TEEEEEEGG----GTEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCT
T ss_pred CEEEEEECC----CCEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCC
Confidence 567777643 247899999987765443 222 11112223478888764 3458999999888876543321
Q ss_pred -CcceeEEEEECCEEEEEecc-CCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEEeC-CCceeeEE
Q psy9769 397 -RRSTLGVAVLNSLIYAVGGF-DGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAENL-DGRILGCV 470 (1026)
Q Consensus 397 -~r~~~~~~~~~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG-~~~~~~~~ 470 (1026)
.+....++.-+|++|+.... ........+++|| +++...+..- .....+.+.. ++ .+|+... .+.+..|+
T Consensus 133 ~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 133 GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 12222222226788874321 1112346799999 5666544210 0111123332 34 6888754 33444444
No 327
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=67.10 E-value=36 Score=34.49 Aligned_cols=105 Identities=11% Similarity=0.049 Sum_probs=61.2
Q ss_pred CCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCC-CeEEeCCCCcC-CcceeEEEEECC
Q psy9769 332 AIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPST-NEWSSAPPMEA-RRSTLGVAVLNS 408 (1026)
Q Consensus 332 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~-~~W~~~~~~p~-~r~~~~~~~~~~ 408 (1026)
.-..++.||+.+++...+...+. .-.+++. -+++.+++++ ++.+++||+.+ .+...+...+. .........-++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 34678899999888765543221 1122222 2456555554 67899999998 77766553332 121222223366
Q ss_pred EEEEEeccCCCCCCCEEEEEECCCCcEEEccC
Q psy9769 409 LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 409 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
+.+++++.... ....++.+|..++....+..
T Consensus 97 ~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 97 ALYAISDKVEF-GKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp SEEEEEECTTT-SSCEEEEEETTCCCCEECCS
T ss_pred CEEEEEEeCCC-CcceEEEEECCCCceEEeec
Confidence 66666653322 34789999988877665544
No 328
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=66.92 E-value=17 Score=40.37 Aligned_cols=105 Identities=10% Similarity=0.110 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCC--------cEEEcCCCCccc-cceeeEEE-CCE-EEEEeccCCCeEEEeCCCC--
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTE--------RWQSVAEMPTRR-CRAGLVFL-HEK-VYAVGGFNGSLRVYDPSTN-- 386 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~--------~W~~~~~~p~~r-~~~~~~~~-~~~-iyv~GG~~~~~~~yd~~~~-- 386 (1026)
..+++.|+.+ ..+..||..+. ....+..+.... .-.+++.. ++. +++.|+.++.+.+||..+.
T Consensus 141 ~~~lat~~~d----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 216 (430)
T 2xyi_A 141 ACVIATKTPS----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK 216 (430)
T ss_dssp EEEEEEECSS----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCB
T ss_pred CcEEEEECCC----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCC
Confidence 4566776644 35778887541 122221111111 11223332 234 7888999999999999873
Q ss_pred -eEEe--CCCC-cCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 387 -EWSS--APPM-EARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 387 -~W~~--~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
.+.. ...+ .....-.+++.. ++.+++.|+.+ ..+..||+.+.
T Consensus 217 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~ 264 (430)
T 2xyi_A 217 EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNN 264 (430)
T ss_dssp GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCS
T ss_pred CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 2221 1111 111112222222 56677777754 57889998765
No 329
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=66.31 E-value=27 Score=37.03 Aligned_cols=98 Identities=9% Similarity=0.032 Sum_probs=55.1
Q ss_pred CEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCC
Q psy9769 366 EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMST 443 (1026)
Q Consensus 366 ~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 443 (1026)
+..++.|+.++.+.+||..+........+........++.+ ++..++.|+.+ ..+..||..+++.........
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~ 128 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHDA 128 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceeeccccC
Confidence 48889999999999999887333221111111111222222 66677777755 478999998887665433222
Q ss_pred CcceeEEEE---ECCEEEEEeCCCc-eeeEE
Q psy9769 444 RRSSVGVGV---LNGCLYAENLDGR-ILGCV 470 (1026)
Q Consensus 444 ~r~~~~~~~---~~~~lyv~GG~~~-~~~~~ 470 (1026)
+ -.+++. -++.+++.|+.++ +.-++
T Consensus 129 ~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 129 P--VKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp C--EEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred c--eEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 2 122222 2566666666443 33333
No 330
>2rf4_A DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=66.29 E-value=5.9 Score=39.49 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=46.3
Q ss_pred cCCceEEeeeecccCCcceeeccccceeeccCcccccchh----------------hhhhcccccccccceeeeeccccc
Q psy9769 646 VPGMKVIANICQQLPHGWKAKLKNTQFKAFISPEAMSTAY----------------NAKYLTNKRVDLDCSVLYVCPRHF 709 (1026)
Q Consensus 646 ~~G~~v~~~V~~v~~~G~~v~~~~~~~~gfi~~~~~~~~~----------------~~~~~~G~~~~~~~~Il~vd~~~~ 709 (1026)
.+|++++|+|.++.+.|+.+-+ .+.|+.||+...++..+ ++.-.+|.++ ++||..++....
T Consensus 128 f~GevL~G~V~~~s~~~Ig~~~-~G~Fn~~Ip~~~ip~~~~f~~~~~~~~~~~wv~~~~~~ig~~I--RFrV~~~~~~~~ 204 (214)
T 2rf4_A 128 QVGDVLEGYIFIQSASHIGLLI-HDAFNASIKKNNIPVDWTFVHNDGNRSLGHWVDSNGEPIDGKL--RFTVRNVHTTGR 204 (214)
T ss_dssp CTTCEEEEEECCCCSSCEEEEE-TTTEEEEECSTTSCSSCBCCCCSCC-CCCCCBCSSCCBCCSEE--EEEEEEEECCSS
T ss_pred CCCCEEEEEEEEECCCcEEEEE-eCCEEEEEcHHHCCCcccccccccccCCCceEcCCCCCCCCEE--EEEEEEEEecCC
Confidence 5799999999999999888765 37889999888875443 1222368888 888888876544
No 331
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=65.80 E-value=23 Score=36.79 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=52.8
Q ss_pred CEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCC
Q psy9769 366 EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTR 444 (1026)
Q Consensus 366 ~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 444 (1026)
+.+|+++..++.+++||+.+. .+.... +... -.+++. -+|++|+.... ...+.+||+.+++.+.+......
T Consensus 40 ~~l~~~~~~~~~i~~~~~~~~-~~~~~~-~~~~-~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~~ 111 (296)
T 3e5z_A 40 SAVIFSDVRQNRTWAWSDDGQ-LSPEMH-PSHH-QNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFEG 111 (296)
T ss_dssp TEEEEEEGGGTEEEEEETTSC-EEEEES-SCSS-EEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEETT
T ss_pred CEEEEEeCCCCEEEEEECCCC-eEEEEC-CCCC-cceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccCC
Confidence 358888888889999999987 554432 2111 223333 26788876532 25799999988888766432111
Q ss_pred ----cceeEEEEECCEEEEE
Q psy9769 445 ----RSSVGVGVLNGCLYAE 460 (1026)
Q Consensus 445 ----r~~~~~~~~~~~lyv~ 460 (1026)
+....++.-+|++|+.
T Consensus 112 ~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 112 KKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EECCCCCCEEECTTSCEEEE
T ss_pred CCCCCCCCEEECCCCCEEEE
Confidence 1112222236789886
No 332
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=65.68 E-value=12 Score=27.94 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=31.1
Q ss_pred CcEEEEEEEEEecc--eEEEEeCCCceeeEeccccCc
Q psy9769 950 GRLVWGVLKEKMPG--GVRVEFDGDISGVFPTSAMSQ 984 (1026)
Q Consensus 950 G~~v~G~V~~i~~~--G~fV~~~~~i~Gl~~~~~ls~ 984 (1026)
|.-+.|+|++|... -++|+|+++-+-.+..++|..
T Consensus 17 G~fYlGtI~~V~~~~~~clV~F~D~s~~W~~~kdi~~ 53 (58)
T 4hcz_A 17 GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISP 53 (58)
T ss_dssp SCEEEEEEEEEETTTTEEEEEETTSCEEEEEGGGEEE
T ss_pred CCEEeEEEEEEecCCCEEEEEEcCCCeEEEEhHHccc
Confidence 88899999999777 499999999999999988843
No 333
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.83 E-value=1.2e+02 Score=33.37 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=77.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCC-CeEEEeCCCCe-EEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNG-SLRVYDPSTNE-WSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~-~~~~yd~~~~~-W~~~~~~ 394 (1026)
++.||+.... ...+.+||+.++.-..+..... ..+ .+.. ++.+|+.....+ .++++++.+.. ...+...
T Consensus 141 ~g~lyv~d~~----~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 141 NNTVLAYQRD----DPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp TTEEEEEETT----TTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred CCCEEEEecC----CCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence 4678887642 3578999999877665533211 112 2222 357777765443 78899987542 2233111
Q ss_pred -c-CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC---CCCCcce-e-EEEEE--CCEEEEEeCC
Q psy9769 395 -E-ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP---MSTRRSS-V-GVGVL--NGCLYAENLD 463 (1026)
Q Consensus 395 -p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~-~-~~~~~--~~~lyv~GG~ 463 (1026)
+ ....-+++++. ++.||+..+ ...+++||+.+.....+.. ....... . +++.. ++.||+....
T Consensus 214 ~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp CTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred cchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 1 11111233333 689999432 2479999998887665521 1111222 1 45554 5899998753
Q ss_pred -CceeeEEcC
Q psy9769 464 -GRILGCVKE 472 (1026)
Q Consensus 464 -~~~~~~~~~ 472 (1026)
+.+..++..
T Consensus 288 ~~~I~~~~~~ 297 (409)
T 3hrp_A 288 LSSVYKITPD 297 (409)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEEecC
Confidence 445555443
No 334
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=64.59 E-value=14 Score=28.58 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=30.3
Q ss_pred CcEEEEEEEEEec--ceEEEEeCCCceeeEeccccC
Q psy9769 950 GRLVWGVLKEKMP--GGVRVEFDGDISGVFPTSAMS 983 (1026)
Q Consensus 950 G~~v~G~V~~i~~--~G~fV~~~~~i~Gl~~~~~ls 983 (1026)
|.-+.|+|++|.. .-|+|+|++|.+-++..++|.
T Consensus 27 Gl~Y~gtI~~V~~~~gtC~V~F~D~s~~w~~~kdi~ 62 (66)
T 2eqj_A 27 GLFYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQ 62 (66)
T ss_dssp SCEEEEEEEEEETTTTEEEEEETTTEEEEEETTTEE
T ss_pred CcEEEeEEEEEccCCcEEEEEEccCCEEEEEeeccc
Confidence 8899999999986 349999999999999988874
No 335
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=64.30 E-value=44 Score=33.42 Aligned_cols=98 Identities=9% Similarity=-0.002 Sum_probs=55.5
Q ss_pred ECCEEEEEeccCCCeEEEeCCC----CeEEeC--------CCCcCC----cceeEEEE--ECCEEEEEeccCCCCCCCEE
Q psy9769 364 LHEKVYAVGGFNGSLRVYDPST----NEWSSA--------PPMEAR----RSTLGVAV--LNSLIYAVGGFDGSSGLNSA 425 (1026)
Q Consensus 364 ~~~~iyv~GG~~~~~~~yd~~~----~~W~~~--------~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~v 425 (1026)
.++.+|+|=| +..|+||..+ +..... +.+|.. .-. ++.. .++++|.|-| +..
T Consensus 69 ~~g~~~fFkg--~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ID-AA~~~~~~gk~yfFkG-------~~y 138 (225)
T 3oyo_A 69 EASEAYVFSG--NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSID-SAFRSTKGKEVYLFKG-------NKY 138 (225)
T ss_dssp STTEEEEEET--TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCC-EEEECSSTTEEEEEET-------TEE
T ss_pred CCCeEEEEcC--CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccc-eEEEECCCCcEEEEeC-------CeE
Confidence 4799999976 4688887532 222211 122321 112 2222 2789999988 678
Q ss_pred EEEECCCCcEEE----cc-CCCC------CcceeEEEE--ECCEEEEEeCCCceeeEEcC
Q psy9769 426 EVYDPSTEKWNM----IA-PMST------RRSSVGVGV--LNGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 426 ~~yd~~~~~W~~----~~-~~p~------~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~ 472 (1026)
|+||..+++... +. ..|. +..--++.. .++++|.|-|. ..+.|+..
T Consensus 139 w~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-~ywr~d~~ 197 (225)
T 3oyo_A 139 VRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-NYVRIDFT 197 (225)
T ss_dssp EEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-EEEEEECC
T ss_pred EEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-EEEEEeCC
Confidence 999977666543 11 1221 222223334 37899999874 44556554
No 336
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.24 E-value=52 Score=34.57 Aligned_cols=136 Identities=15% Similarity=0.134 Sum_probs=74.8
Q ss_pred cEEEEEECCCCcEEEcCCCCc------------------cccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCC
Q psy9769 334 RSVECYDFKTERWQSVAEMPT------------------RRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~ 393 (1026)
..+++||+.+..++.+..... ...-++++.. ++.|||.... +.+.+||+.+...+.+..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~ 118 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLAT 118 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEES
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecc
Confidence 578999998877765431110 0112445555 5899998433 338889988776554432
Q ss_pred CcCC---cceeEEEEE--CCEEEEEeccCC------------CCCCCEEEEEECCCCcEEEcc-CCCCCcceeEEEEE-C
Q psy9769 394 MEAR---RSTLGVAVL--NSLIYAVGGFDG------------SSGLNSAEVYDPSTEKWNMIA-PMSTRRSSVGVGVL-N 454 (1026)
Q Consensus 394 ~p~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~ 454 (1026)
.... ..-..+++- +|.||+.-.... ......+++||+.+++...+. .+..| .+++.- +
T Consensus 119 ~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~d 195 (322)
T 2fp8_A 119 SVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GGAEVSAD 195 (322)
T ss_dssp EETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CEEEECTT
T ss_pred cCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---cceEECCC
Confidence 1111 111233332 578998743211 012357999999888766543 22222 233333 3
Q ss_pred -CEEEEEe-CCCceeeEEcCc
Q psy9769 455 -GCLYAEN-LDGRILGCVKEI 473 (1026)
Q Consensus 455 -~~lyv~G-G~~~~~~~~~~~ 473 (1026)
+.||+.- +.+.+..|+...
T Consensus 196 g~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 196 SSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp SSEEEEEEGGGTEEEEEESSS
T ss_pred CCEEEEEeCCCCeEEEEECCC
Confidence 3688884 445666776543
No 337
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=63.66 E-value=1e+02 Score=37.28 Aligned_cols=145 Identities=14% Similarity=0.189 Sum_probs=81.2
Q ss_pred EEEEECCCCcEEEcCCCCc---cccceeeEEE----CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc----------
Q psy9769 336 VECYDFKTERWQSVAEMPT---RRCRAGLVFL----HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR---------- 398 (1026)
Q Consensus 336 ~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r---------- 398 (1026)
+++=+-.-.+|+.+..+|. .-.......+ .+.||+.....+.+++=.-.-.+|+.+..+|...
T Consensus 145 l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~ 224 (789)
T 1sqj_A 145 IWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPD 224 (789)
T ss_dssp EEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTCCCSCCHHHHHTSTT
T ss_pred EEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcCccccccccccCc
Confidence 4443334578998876542 1122233333 2478876543234444222345799887554321
Q ss_pred ------ceeEEEEE--CCEEEEEeccCCC---CCCCEEEEEECCCCcEEEccCCCCC---------cc---e-eEEEEE-
Q psy9769 399 ------STLGVAVL--NSLIYAVGGFDGS---SGLNSAEVYDPSTEKWNMIAPMSTR---------RS---S-VGVGVL- 453 (1026)
Q Consensus 399 ------~~~~~~~~--~~~iyv~GG~~~~---~~~~~v~~yd~~~~~W~~~~~~p~~---------r~---~-~~~~~~- 453 (1026)
+.+.++.. ++.||+..+.... .....+++.+-...+|+.+.+.|.. .. + .++++.
T Consensus 225 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p 304 (789)
T 1sqj_A 225 KKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDA 304 (789)
T ss_dssp CCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEET
T ss_pred ccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECC
Confidence 11444333 7899988432110 1235688888889999998865431 12 2 234443
Q ss_pred --CCEEEEEeCC-------CceeeEEcCcccEEEee
Q psy9769 454 --NGCLYAENLD-------GRILGCVKEITDWGLII 480 (1026)
Q Consensus 454 --~~~lyv~GG~-------~~~~~~~~~~~~W~~~~ 480 (1026)
.+.+|+.++. +.++.-.+...+|..+.
T Consensus 305 ~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 305 TNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp TEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred CCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 3578988754 44555555568899987
No 338
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=63.44 E-value=85 Score=32.18 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=54.5
Q ss_pred cEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIY 411 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 411 (1026)
+.+..||..+.+....-.+...... .+++. -++...+.|+.++.+.+||..+++-........ ....+...++.+.
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~--~~~~~~~~~~~~l 122 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS--ARVGSLSWNSYIL 122 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEETTEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCcc--ceEEEeecCCCEE
Confidence 4799999998876654333222222 22222 256788899999999999999876432211111 1223344556666
Q ss_pred EEeccCCCCCCCEEEEEECCCCc
Q psy9769 412 AVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 412 v~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+.|+.+ ..+..++..+..
T Consensus 123 ~s~~~~-----~~~~~~~~~~~~ 140 (318)
T 4ggc_A 123 SSGSRS-----GHIHHHDVRVAE 140 (318)
T ss_dssp EEEETT-----SEEEEEETTSSS
T ss_pred EEEecC-----CceEeeecCCCc
Confidence 666654 345555554443
No 339
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=63.41 E-value=32 Score=35.96 Aligned_cols=132 Identities=11% Similarity=0.033 Sum_probs=69.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC--
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA-- 396 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~-- 396 (1026)
+.+|+.+-. ...+++|++ +...+.+.. +... ..+.+. -+|++|+.....+.+.+||+. .+.+.+.....
T Consensus 57 ~~l~~~d~~----~~~i~~~~~-~g~~~~~~~-~~~~-~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 57 RTLVWSDLV----GRRVLGWRE-DGTVDVLLD-ATAF-TNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGK 128 (305)
T ss_dssp TEEEEEETT----TTEEEEEET-TSCEEEEEE-SCSC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTE
T ss_pred CEEEEEECC----CCEEEEEeC-CCCEEEEeC-CCCc-cceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCC
Confidence 457776543 246888998 444544332 1111 122222 257888875555678899986 56655432111
Q ss_pred --CcceeEEEEECCEEEEE----eccCC--------CCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEE
Q psy9769 397 --RRSTLGVAVLNSLIYAV----GGFDG--------SSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAE 460 (1026)
Q Consensus 397 --~r~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~ 460 (1026)
.+....++.-+|.||+. |-... ......+++||+.+++++.+..+ . ...+.+.. ++ .||+.
T Consensus 129 ~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 129 RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADL--D-HPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEE--S-SEEEEEECTTSSEEEEE
T ss_pred ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecC--C-CCcceEEcCCCCEEEEE
Confidence 11112222237889985 32210 01136799999988888766411 1 11223333 33 58887
Q ss_pred eC
Q psy9769 461 NL 462 (1026)
Q Consensus 461 GG 462 (1026)
..
T Consensus 206 ~~ 207 (305)
T 3dr2_A 206 QT 207 (305)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 340
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=63.14 E-value=63 Score=34.06 Aligned_cols=88 Identities=9% Similarity=0.085 Sum_probs=53.9
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCC-
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMST- 443 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~- 443 (1026)
++.+|+++...+.+++||+.+++..... .+. .....+..-+|++|+... ..+++||+.+++++.+...+.
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEECSSTT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCCC
Confidence 3688988877788999999987765432 221 112222234788888642 359999999999887654332
Q ss_pred -CcceeEEEEE--CCEEEEEe
Q psy9769 444 -RRSSVGVGVL--NGCLYAEN 461 (1026)
Q Consensus 444 -~r~~~~~~~~--~~~lyv~G 461 (1026)
+......... ++++|+..
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCEEECCCCCEEEEe
Confidence 1111222222 67787753
No 341
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=62.80 E-value=1.1e+02 Score=32.12 Aligned_cols=101 Identities=10% Similarity=0.140 Sum_probs=53.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEE-cCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQS-VAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+.+++.|+.+ ..+..||..+.+... +..-. ..-.+++. -++...+.||.++.+.+||.....-.........
T Consensus 88 ~~~l~s~s~D----~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 161 (343)
T 2xzm_R 88 NCFAISSSWD----KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENH 161 (343)
T ss_dssp TTEEEEEETT----SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSC
T ss_pred CCEEEEEcCC----CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCC
Confidence 4455566544 478889988765432 21111 11112222 2566778899999999999875443333222111
Q ss_pred cceeEEEEE--CC----------EEEEEeccCCCCCCCEEEEEECC
Q psy9769 398 RSTLGVAVL--NS----------LIYAVGGFDGSSGLNSAEVYDPS 431 (1026)
Q Consensus 398 r~~~~~~~~--~~----------~iyv~GG~~~~~~~~~v~~yd~~ 431 (1026)
.....++.+ ++ ..++.||.+ ..+..||..
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~ 202 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTN 202 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETT
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCC
Confidence 111222222 11 466677765 467788843
No 342
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=62.76 E-value=15 Score=38.38 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=52.8
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMST 443 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 443 (1026)
++.+|++.-..+.+++||+.++...... .+ .+. .+.+. -+|++|+..+ ..+.+||+.+++++.+...+.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~-~~~-~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVT-MD-APV-SSVALRQSGGYVATIG-------TKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEE-CS-SCE-EEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEe-CC-Cce-EEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEEEecCC
Confidence 4789999888889999999987654332 11 111 22232 2677776531 579999999999887764331
Q ss_pred --CcceeEEEEE--CCEEEEE
Q psy9769 444 --RRSSVGVGVL--NGCLYAE 460 (1026)
Q Consensus 444 --~r~~~~~~~~--~~~lyv~ 460 (1026)
+........+ ++++|+.
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEe
Confidence 2222222223 6777774
No 343
>1h95_A CSD, Y-box binding protein; translation factor, transcription factor, OB-fold, 5- stranded anti-parallel beta-barrel, single stranded DNA binding; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=62.23 E-value=29 Score=28.15 Aligned_cols=58 Identities=10% Similarity=-0.031 Sum_probs=38.8
Q ss_pred CcEEEEEEEEEe---cceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEE
Q psy9769 950 GRLVWGVLKEKM---PGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKY 1007 (1026)
Q Consensus 950 G~~v~G~V~~i~---~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~v 1007 (1026)
....+|+|+... -||-+..-.++-+=|+|.++|.......--..+++||.|++.+..=
T Consensus 6 ~~~~~G~Vkwfn~~kGfGFI~~~~gg~DvFvH~s~i~~~~~~~g~~~l~~G~~V~f~~~~~ 66 (79)
T 1h95_A 6 ATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEG 66 (79)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEGGGTEEEEEEGGGBCSCCCSCCSCSCCSSCEEEEEEEEC
T ss_pred ccccceEEEEEECCCCcEEEecCCCCccEEEEhHHccccccccccccCCCCCEEEEEEEEC
Confidence 456789999874 3554444334688999999996531111124578999999988643
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=61.65 E-value=1.5e+02 Score=35.57 Aligned_cols=145 Identities=10% Similarity=0.139 Sum_probs=81.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCC----CC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAP----PM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~----~~ 394 (1026)
++.||+... .-+.+||+.++++...... .+..-.+++..+|.||+.. .+.+++||+.++++.... .+
T Consensus 73 ~g~lWigT~------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~~~~l 143 (758)
T 3ott_A 73 NTYLYMGTD------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGA--LNGLYTYQLQSRKLTSFDTRRNGL 143 (758)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEECHHHHCC
T ss_pred CCcEEEEeC------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEc--CCcceeEeCCCCeEEEeccCCCCc
Confidence 345666432 3578999999887652111 1111122334578888753 336889999988887652 22
Q ss_pred cCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCC-----cceeEEEEE--CCEEEEEeCCCce
Q psy9769 395 EARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTR-----RSSVGVGVL--NGCLYAENLDGRI 466 (1026)
Q Consensus 395 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-----r~~~~~~~~--~~~lyv~GG~~~~ 466 (1026)
+... -.+++.. +|.||+.. . ..+.+||+.++++..... |.. ..-.+++.- ++.|||-. .+++
T Consensus 144 ~~~~-i~~i~~d~~g~lWigt--~-----~Gl~~~~~~~~~~~~~~~-~~~~~~~~~~i~~i~~d~~~~~lWigt-~~Gl 213 (758)
T 3ott_A 144 PNNT-IYSIIRTKDNQIYVGT--Y-----NGLCRYIPSNGKFEGIPL-PVHSSQSNLFVNSLLEDTTRQCVWIGT-EGYL 213 (758)
T ss_dssp SCSC-EEEEEECTTCCEEEEE--T-----TEEEEEETTTTEEEEECC-CCCTTCSSCCEEEEEEETTTTEEEEEE-EEEE
T ss_pred CCCe-EEEEEEcCCCCEEEEe--C-----CCHhhCccCCCceEEecC-CCccccccceeEEEEEECCCCEEEEEE-CCCC
Confidence 2221 1222222 67888832 1 358899999988876532 211 111223333 24577743 3457
Q ss_pred eeEEcCcccEEEeecC
Q psy9769 467 LGCVKEITDWGLIIEL 482 (1026)
Q Consensus 467 ~~~~~~~~~W~~~~~l 482 (1026)
..|+..+.++.....+
T Consensus 214 ~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 214 FQYFPSTGQIKQTEAF 229 (758)
T ss_dssp EEEETTTTEEEEEEEE
T ss_pred eEEcCCCCeEEeccCC
Confidence 7788777777655433
No 345
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=61.50 E-value=95 Score=37.47 Aligned_cols=156 Identities=13% Similarity=0.157 Sum_probs=85.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccc---cceeeEEE----CCEEEEEeccCCCeEEEeCCCCeEEeCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRR---CRAGLVFL----HEKVYAVGGFNGSLRVYDPSTNEWSSAP 392 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~~iyv~GG~~~~~~~yd~~~~~W~~~~ 392 (1026)
+.+|+.+. ...+++=+-.-.+|+.+..+|... .......+ .+.+|+.....+.+++=+-.-.+|+.+.
T Consensus 146 ~~v~a~~~-----~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~ 220 (763)
T 3a0f_A 146 DELWFGSR-----TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWSQVG 220 (763)
T ss_dssp TCEEEECS-----SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCEECT
T ss_pred CEEEEEeC-----CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCccccC
Confidence 56666542 123443333456899988766532 22222233 2478876543223444333345799887
Q ss_pred CCc--------------------CCcceeEEEEE-CCEEEEEeccCC---CCCCCEEEEEECCCCcEEEccCCCCC--cc
Q psy9769 393 PME--------------------ARRSTLGVAVL-NSLIYAVGGFDG---SSGLNSAEVYDPSTEKWNMIAPMSTR--RS 446 (1026)
Q Consensus 393 ~~p--------------------~~r~~~~~~~~-~~~iyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~p~~--r~ 446 (1026)
..| .++..+.++.. ++.+|+...... ......+++++-...+|+.+.++|.. .+
T Consensus 221 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~ 300 (763)
T 3a0f_A 221 GQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTY 300 (763)
T ss_dssp TCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEE
T ss_pred CCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccc
Confidence 555 22333444333 688898853210 01235788888889999998765531 11
Q ss_pred ------------eeEEEEE--CCEEEEEeCC----CceeeEEcCcccEEEee
Q psy9769 447 ------------SVGVGVL--NGCLYAENLD----GRILGCVKEITDWGLII 480 (1026)
Q Consensus 447 ------------~~~~~~~--~~~lyv~GG~----~~~~~~~~~~~~W~~~~ 480 (1026)
++..+.+ .+.+|+.+.. ..++.-.+...+|+.+.
T Consensus 301 ~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~~~~~l~~S~DgG~tW~~~~ 352 (763)
T 3a0f_A 301 PAPTGNKKVVPGGWNGISVGNGDTVVVSTLDANGEDSVYLSRDAGNSWKDLG 352 (763)
T ss_dssp SCCCCCTTSCCCEEEEEEECSTBCEEEEEESCTTSCCEEEESBTTSSEEEHH
T ss_pred cccccccccccCCceeEEEcCCCeEEEEecCCCCCCCEEEECCCCCCcccCc
Confidence 2223333 3678887752 34444445568899873
No 346
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=61.46 E-value=91 Score=32.84 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=38.2
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
++.+.+.|+.++.+.+||..+.+... +..- ...-.+++. -++..++.||.+ ..+..||.....
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH--QSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECC--CSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC--CCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCc
Confidence 46777889999999999998875422 2111 111112222 256666777765 457788876443
No 347
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=61.32 E-value=69 Score=35.81 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE--cCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCe---------
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS--VAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNE--------- 387 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~--------- 387 (1026)
++.+|++-| +..|.||..+++... .+.+|. --++...+|++|+|-|. ..++||+.+++
T Consensus 158 ~~~~yfFkG------~~yw~yd~~~~~~~~~~w~gi~~---iDAA~~~~g~~YfFkG~--~y~rfd~~~~~v~~gyPk~i 226 (460)
T 1qhu_A 158 DEGILFFQG------NRKWFWDLTTGTKKERSWPAVGN---CTSALRWLGRYYCFQGN--QFLRFNPVSGEVPPGYPLDV 226 (460)
T ss_dssp SSEEEEEET------TEEEEEETTTTEEEEECCTTSCC---CSEEEEETTEEEEEETT--EEEEECTTTCCCCTTCCEEH
T ss_pred CCeEEEEec------ccEEEEecccceeecccCCCCCc---cchheeeCCceEEEECC--EEEEEcCccCcccCCCCcch
Confidence 456777877 468999998876543 233332 23555567999999764 46778876543
Q ss_pred ---EEeCCCCc------------------CCccee-EEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEE--Ec----
Q psy9769 388 ---WSSAPPME------------------ARRSTL-GVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN--MI---- 438 (1026)
Q Consensus 388 ---W~~~~~~p------------------~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~--~~---- 438 (1026)
|..++... .+.... +++. .+|++|.|-| +..|++|...+.+. .+
T Consensus 227 s~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~~Is~~W 299 (460)
T 1qhu_A 227 RDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQW 299 (460)
T ss_dssp HHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCEEGGGTC
T ss_pred hhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCccchhhhc
Confidence 22222110 011122 3333 4789999987 45677776443331 12
Q ss_pred cCCCCCcceeEEEEECCEEEEEeCC
Q psy9769 439 APMSTRRSSVGVGVLNGCLYAENLD 463 (1026)
Q Consensus 439 ~~~p~~r~~~~~~~~~~~lyv~GG~ 463 (1026)
+.+|.. --++...++++|+|-|.
T Consensus 300 pglP~~--IDAAf~~~~~~yfFkG~ 322 (460)
T 1qhu_A 300 PQGPST--VDAAFSWEDKLYLIQDT 322 (460)
T ss_dssp TTSCSS--CSEEEEETTEEEEEETT
T ss_pred cCCCCC--CcEEEEECCeEEEEeCC
Confidence 133433 22444458899999774
No 348
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=60.86 E-value=1.7e+02 Score=35.30 Aligned_cols=160 Identities=13% Similarity=0.185 Sum_probs=86.2
Q ss_pred CcEEEEEcCC-CC-CCCcEEEEEECCCCcEEEcCC-CC-----ccccc-eeeEEE---CCEEEEEeccCCCeEEEeCCCC
Q psy9769 319 PKVMLVVGGQ-AP-KAIRSVECYDFKTERWQSVAE-MP-----TRRCR-AGLVFL---HEKVYAVGGFNGSLRVYDPSTN 386 (1026)
Q Consensus 319 ~~~i~v~GG~-~~-~~~~~~~~yd~~~~~W~~~~~-~p-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~yd~~~~ 386 (1026)
++.+|+..|. .. .....+++=+-.-.+|+.+.. .+ ..|.. ..+++. .+.+|+.+ ..+.+++=+-.-.
T Consensus 87 ~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S~DgG~ 165 (763)
T 3a0f_A 87 PDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRSTDRAQ 165 (763)
T ss_dssp TTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEESSTTS
T ss_pred CCEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEECCCCc
Confidence 4578886552 11 112334444444678998752 11 12321 244443 36788754 3334444333446
Q ss_pred eEEeCCCCcCCc---ceeEEEEE----CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC-----------------
Q psy9769 387 EWSSAPPMEARR---STLGVAVL----NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS----------------- 442 (1026)
Q Consensus 387 ~W~~~~~~p~~r---~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p----------------- 442 (1026)
+|+.+..++... .+.....+ .+.+|+.....+ .+++=+-...+|+.+...|
T Consensus 166 TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~ 240 (763)
T 3a0f_A 166 TWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTA 240 (763)
T ss_dssp SCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCC
T ss_pred CccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-----eEEEECCCCCCccccCCCcccccccccccccccccc
Confidence 899988766432 22223333 246877643221 3433333456899987655
Q ss_pred ---CCcceeEEEEE-CCEEEEEe--------C-CCceeeEEcCcccEEEeecCCC
Q psy9769 443 ---TRRSSVGVGVL-NGCLYAEN--------L-DGRILGCVKEITDWGLIIELPN 484 (1026)
Q Consensus 443 ---~~r~~~~~~~~-~~~lyv~G--------G-~~~~~~~~~~~~~W~~~~~lP~ 484 (1026)
.++..+.++.. ++.+|+.. | .+.++..++...+|+.+.++|.
T Consensus 241 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 241 IQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred ccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 22333444333 68899884 2 2456667777799999987664
No 349
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=60.60 E-value=1.1e+02 Score=32.59 Aligned_cols=131 Identities=16% Similarity=0.128 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCc---EEEcCCCCccccce-eeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTER---WQSVAEMPTRRCRA-GLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAP 392 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~---W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~ 392 (1026)
.+.+||.+-.. ...+++++|.... |-.-.+.+..+.+. ++++. +..|++..+ .+.++.||..+-...
T Consensus 147 ~GnaYVt~s~~---~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~--- 219 (334)
T 2p9w_A 147 DGNSYVAFALG---MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAW--- 219 (334)
T ss_dssp TSCEEEEEEES---SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCC---
T ss_pred CCCEEEeCCCC---CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcce---
Confidence 46788865432 1568999997653 54333223335444 45555 457777777 889999998743220
Q ss_pred CCcCC--------cceeE--EEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc---CCCC---CcceeEEEE----
Q psy9769 393 PMEAR--------RSTLG--VAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA---PMST---RRSSVGVGV---- 452 (1026)
Q Consensus 393 ~~p~~--------r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~---~r~~~~~~~---- 452 (1026)
++|.. ...-+ ..-++|++.++.-.. +.++.+-...+ |.... ..|. ++...++++
T Consensus 220 ~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-----~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~ 293 (334)
T 2p9w_A 220 PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-----PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQG 293 (334)
T ss_dssp CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-----TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEET
T ss_pred eecccccCCcccccCcccccccccCCEEEEEEcCC-----CCEEEEECCCC-cceeEEeeeecCccccCceeEEEEeccc
Confidence 12211 11112 223689985554321 23444444444 86543 2222 344444444
Q ss_pred ECCEEEEEeC
Q psy9769 453 LNGCLYAENL 462 (1026)
Q Consensus 453 ~~~~lyv~GG 462 (1026)
.+++||++.+
T Consensus 294 ~~~~iYvv~~ 303 (334)
T 2p9w_A 294 SEQGLYAVSA 303 (334)
T ss_dssp TEEEEEEEEC
T ss_pred cCCeEEEEee
Confidence 5789999975
No 350
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=60.59 E-value=47 Score=34.29 Aligned_cols=88 Identities=14% Similarity=0.158 Sum_probs=48.6
Q ss_pred ccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEE
Q psy9769 373 GFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGV 450 (1026)
Q Consensus 373 G~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 450 (1026)
|.++++.+||..+++....-.+......-.++.+ +++.++.|+.+ ..+..||..+++-........ ....+
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~--~~~~~ 114 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS--ARVGS 114 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SCEEE
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCcc--ceEEE
Confidence 5678899999998876543322222222222333 67788888866 478899998876433221111 12223
Q ss_pred EEECCEEEEEeCCCcee
Q psy9769 451 GVLNGCLYAENLDGRIL 467 (1026)
Q Consensus 451 ~~~~~~lyv~GG~~~~~ 467 (1026)
...++.+.+.|+.....
T Consensus 115 ~~~~~~~l~s~~~~~~~ 131 (318)
T 4ggc_A 115 LSWNSYILSSGSRSGHI 131 (318)
T ss_dssp EEEETTEEEEEETTSEE
T ss_pred eecCCCEEEEEecCCce
Confidence 33445555556544433
No 351
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=60.58 E-value=38 Score=36.77 Aligned_cols=110 Identities=18% Similarity=0.242 Sum_probs=58.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCC--cEEEcCCCCccccc-eeeEEE--CCEEEEEeccCCCeEEEeCCCCe------E
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTE--RWQSVAEMPTRRCR-AGLVFL--HEKVYAVGGFNGSLRVYDPSTNE------W 388 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~------W 388 (1026)
+.+++.|+.+ ..+..||..+. ....+..+...... .+++.. ++.+++.|+.++.+.+||..+.. -
T Consensus 79 ~~~l~~~~~d----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 154 (416)
T 2pm9_A 79 NKIIAGALDN----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYT 154 (416)
T ss_dssp SSCEEEEESS----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCC
T ss_pred CCeEEEEccC----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccc
Confidence 3455555543 35778887761 11122112111111 222322 26788889999999999998765 1
Q ss_pred E-eCCCCc-CCcceeEEEEE-C-CEEEEEeccCCCCCCCEEEEEECCCCcEEEc
Q psy9769 389 S-SAPPME-ARRSTLGVAVL-N-SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 389 ~-~~~~~p-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
. ...... ....-.+++.. + +.+++.|+.+ ..+..||+.+.+....
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~ 203 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDLKAKKEVIH 203 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEETTTTEEEEE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEECCCCCcceE
Confidence 1 111111 11111223332 3 5678887765 4588999988765433
No 352
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=59.17 E-value=82 Score=37.29 Aligned_cols=104 Identities=15% Similarity=0.058 Sum_probs=58.1
Q ss_pred CcEEEEEECCCC-cEEEcCCCCcccc---ceeeEE-E--CCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCcceeEE
Q psy9769 333 IRSVECYDFKTE-RWQSVAEMPTRRC---RAGLVF-L--HEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARRSTLGV 403 (1026)
Q Consensus 333 ~~~~~~yd~~~~-~W~~~~~~p~~r~---~~~~~~-~--~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~ 403 (1026)
...++.+|+.+. .+..+........ ...++. - +|++++.+..++ .++.+|.....+..+..-..... ..
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~--~~ 360 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT--NF 360 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE--EE
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE--ee
Confidence 457899999888 6665532111111 012222 2 677666666655 45667766677777654322221 21
Q ss_pred EEE--CC-EEEEEeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 404 AVL--NS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 404 ~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
..+ ++ .||+.+..+ ......++.+|+.++..+.+.
T Consensus 361 ~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEA-SPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEECTTSSEEEEEESSS-CTTCBEEEEEETTCCCCEESC
T ss_pred eEEcCCCCEEEEEecCC-CCceEEEEEEEcCCCCceecc
Confidence 223 44 566655432 222468999999888777665
No 353
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=59.16 E-value=78 Score=36.35 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=58.1
Q ss_pred cCCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEeccCCCeEEEeC--CCCeEEeCC
Q psy9769 317 RVPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGFNGSLRVYDP--STNEWSSAP 392 (1026)
Q Consensus 317 ~~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~yd~--~~~~W~~~~ 392 (1026)
..++.+|+.+..+ ..+..+|..+.+.... ++....-|+++.. +| .+|+.+ .++.+.+||+ .+.+- +.
T Consensus 146 ~p~~~~~vs~~~d----~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~-~d~~V~v~D~~~~t~~~--~~ 216 (543)
T 1nir_A 146 DLPNLFSVTLRDA----GQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIG-RDARIDMIDLWAKEPTK--VA 216 (543)
T ss_dssp CGGGEEEEEEGGG----TEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSCEE--EE
T ss_pred CCCCEEEEEEcCC----CeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEEC-CCCeEEEEECcCCCCcE--EE
Confidence 3456788887543 4788899988765422 2211123444333 44 666654 5588999999 66543 22
Q ss_pred CCcCCcceeEEEEE-----CCE-EEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 393 PMEARRSTLGVAVL-----NSL-IYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 393 ~~p~~r~~~~~~~~-----~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
.++....-..++.. +|+ +|+. .+. .+.+..||..+.+-
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~-~~~----~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAG-AYW----PPQFAIMDGETLEP 260 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEE-EEE----SSEEEEEETTTCCE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEE-Ecc----CCeEEEEecccccc
Confidence 23322222333332 454 5554 332 25688899877654
No 354
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=58.90 E-value=66 Score=38.20 Aligned_cols=134 Identities=11% Similarity=0.146 Sum_probs=67.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCC-CCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAP-PME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~-~~p 395 (1026)
++.+++.|+.+ ..+..||..+..-... +...... .+++. .++...+.|+.++.+.+||.....-..+. ...
T Consensus 441 ~g~~l~sgs~D----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 514 (694)
T 3dm0_A 441 DGQFALSGSWD----GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGE 514 (694)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTT
T ss_pred CCCEEEEEeCC----CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCC
Confidence 34455555543 4678888877643221 1111111 12222 25677788999999999998655322222 111
Q ss_pred CCcceeEEEEE--CC--EEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCCc
Q psy9769 396 ARRSTLGVAVL--NS--LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDGR 465 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 465 (1026)
..+....++.+ ++ ..++.|+.+ ..+..||+.+.+-... +........++.+ ++++.+.|+.++
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 11222233333 22 456667655 4688899877654321 1111111222222 566777776543
No 355
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=58.82 E-value=22 Score=42.91 Aligned_cols=128 Identities=11% Similarity=0.133 Sum_probs=67.5
Q ss_pred CCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCC--CCcCCcceeEEEEE---CCEEEEEeccC
Q psy9769 343 TERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAP--PMEARRSTLGVAVL---NSLIYAVGGFD 417 (1026)
Q Consensus 343 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~---~~~iyv~GG~~ 417 (1026)
-.+|+.+...|....-.....-++.+|+.+ .+.+++=.-.-.+|+... .+|... ...... ++.+|+.+..
T Consensus 555 G~tW~~~~~~~~~~~i~~~~~~~~~~~a~~--~g~v~~S~DgG~tW~~~~~~~~p~~~--~~i~~~~~~~g~l~~~~~~- 629 (737)
T 2cn3_A 555 GNSWKVCTNLGMGAVVASDRVNGKKFYAFY--NGKFYISTDGGLTFTDTKAPQLPKSV--NKIKAVPGKEGHVWLAARE- 629 (737)
T ss_dssp TSSCEECBTCCTTCEEEECSSCTTCEEEEE--TTEEEEESSTTSBCEECCCSSCCSCC--SEEEEETTEEEEEEEECBT-
T ss_pred CCCCccCCCCCCCceEEEEecCCCEEEEec--CCEEEEECCCCcCcccccCCCCCCcc--ceEEEEeCCCCEEEEEeCC-
Confidence 568999876554311110001245777765 455555333346799864 344422 223333 5678887643
Q ss_pred CCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEE-E-C---CEEEEEeCCCc---eeeEEcCcccEEEeec
Q psy9769 418 GSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGV-L-N---GCLYAENLDGR---ILGCVKEITDWGLIIE 481 (1026)
Q Consensus 418 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~---~~lyv~GG~~~---~~~~~~~~~~W~~~~~ 481 (1026)
..+++-+-...+|+.+...+.. ....... . + +.||++|..+. ++.-.+...+|..+..
T Consensus 630 -----g~l~~S~D~G~tW~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~~ 695 (737)
T 2cn3_A 630 -----GGLWRSTDGGYTFEKLSNVDTA-HVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRIND 695 (737)
T ss_dssp -----TCEEEESSTTSSCEECTTCSEE-EEEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECSB
T ss_pred -----CcEEEEeCCCcccEECcCCCcc-ceEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEeccC
Confidence 2455555556799998653321 1111111 1 2 27999873222 3333445578999863
No 356
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=58.58 E-value=29 Score=38.40 Aligned_cols=102 Identities=14% Similarity=0.255 Sum_probs=55.1
Q ss_pred EEEEcCCCCCCCcEEEEEECCCC---cEEE--cCCCC-ccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCe-EEeCC
Q psy9769 322 MLVVGGQAPKAIRSVECYDFKTE---RWQS--VAEMP-TRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNE-WSSAP 392 (1026)
Q Consensus 322 i~v~GG~~~~~~~~~~~yd~~~~---~W~~--~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~-W~~~~ 392 (1026)
+++.|+.+ ..+..||..+. .+.. ..... ....-.+++.. ++.+++.|+.++.+.+||..+.. ...+.
T Consensus 196 ~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~ 271 (430)
T 2xyi_A 196 YLLSASDD----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH 271 (430)
T ss_dssp EEEEECTT----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE
T ss_pred eEEEEeCC----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee
Confidence 66666644 35788888762 2221 11111 11111223332 56788889999999999998752 11111
Q ss_pred CCcCCcceeEEEEE--CC-EEEEEeccCCCCCCCEEEEEECCC
Q psy9769 393 PMEARRSTLGVAVL--NS-LIYAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 393 ~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
.+........++.+ ++ .+++.|+.+ ..+..||..+
T Consensus 272 ~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~ 309 (430)
T 2xyi_A 272 TVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRN 309 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred EeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 11111112223333 23 488888865 4688999875
No 357
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=58.53 E-value=92 Score=37.77 Aligned_cols=139 Identities=14% Similarity=0.174 Sum_probs=76.8
Q ss_pred CCcEEEcCCCCccccceeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC-----CcceeEEEEE---CCEEE
Q psy9769 343 TERWQSVAEMPTRRCRAGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA-----RRSTLGVAVL---NSLIY 411 (1026)
Q Consensus 343 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~---~~~iy 411 (1026)
..+|+.+.+....| -.++++. .+.+|+ |+..+.+++-+-.-.+|+.+...+. .+.-+++++. .+.+|
T Consensus 3 ~~~W~~~~~~~~g~-i~~i~~~p~~~~~~~a-~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~ 80 (789)
T 1sqj_A 3 HYEFKNVAIGGGGY-ITGIVAHPKTKDLLYA-RTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLY 80 (789)
T ss_dssp -CEEEECCCCBCSC-EEEEEECSSSTTCEEE-EESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEE
T ss_pred cccceEccCCCCCc-EEEEEECCCCCCEEEE-EecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEE
Confidence 35799988633332 2333333 245665 5555678887777889999865321 2233444443 25788
Q ss_pred EEeccCCCCCCCEEEEEECCCCcEEEccC-CC-----CCc-ceeEEEEE---CCEEEEEeCCCceeeEEcCcccEEEeec
Q psy9769 412 AVGGFDGSSGLNSAEVYDPSTEKWNMIAP-MS-----TRR-SSVGVGVL---NGCLYAENLDGRILGCVKEITDWGLIIE 481 (1026)
Q Consensus 412 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~W~~~~~ 481 (1026)
+..|.........+++=+-...+|+.+.. ++ ..| ..+.+++. .+.+|+..-.+.++.-.+...+|+.+..
T Consensus 81 ~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~ 160 (789)
T 1sqj_A 81 LAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTS 160 (789)
T ss_dssp EEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETT
T ss_pred EEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCcc
Confidence 87664221111455555555678998752 11 122 22344444 3567774424445544555688999987
Q ss_pred CC
Q psy9769 482 LP 483 (1026)
Q Consensus 482 lP 483 (1026)
+|
T Consensus 161 ~~ 162 (789)
T 1sqj_A 161 IP 162 (789)
T ss_dssp SC
T ss_pred Cc
Confidence 66
No 358
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=58.01 E-value=1.4e+02 Score=35.33 Aligned_cols=115 Identities=11% Similarity=0.083 Sum_probs=65.7
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCC------C--cEEEcCCCCccccceeeEEECCEEEEEeccCC---CeEEEeCCCC--
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKT------E--RWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNG---SLRVYDPSTN-- 386 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~yd~~~~-- 386 (1026)
+.|++.........+.++.+|..+ . .|..+....... ......-++.+|+.+..++ .++.+|+.+.
T Consensus 245 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 245 RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 344444332222256899999875 3 577765432222 1223334678888876543 6888998775
Q ss_pred -eEEeCCCCcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCc-EEEc
Q psy9769 387 -EWSSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEK-WNMI 438 (1026)
Q Consensus 387 -~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~ 438 (1026)
.|+.+.+-.....-...+.. ++.+++....++ ...++.+|+.+++ ...+
T Consensus 324 ~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 324 SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEE
T ss_pred ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEec
Confidence 48776432221122234445 778887766543 3578999986655 4444
No 359
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.89 E-value=28 Score=26.73 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=31.7
Q ss_pred CcEEEEEEEEEec--ceEEEEeCCCceeeEeccccCccc
Q psy9769 950 GRLVWGVLKEKMP--GGVRVEFDGDISGVFPTSAMSQAT 986 (1026)
Q Consensus 950 G~~v~G~V~~i~~--~G~fV~~~~~i~Gl~~~~~ls~~~ 986 (1026)
|.-+.|+|++|.. .-++|.|+++.+=++..++|....
T Consensus 23 GlfYlGtV~kV~~~~~~ClV~FeD~s~~wv~~kdi~~~~ 61 (68)
T 2e5p_A 23 GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAA 61 (68)
T ss_dssp SSEEEEEEEEEETTTTEEEEEETTTEEEEEETTTEECCC
T ss_pred CcEEEeEEEEEecCCcEEEEEEccCCeeeeeeecccccc
Confidence 8889999999975 449999999999999999986533
No 360
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=57.69 E-value=25 Score=45.36 Aligned_cols=104 Identities=12% Similarity=0.134 Sum_probs=57.6
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcce
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRST 400 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~ 400 (1026)
..+++|+.+ ..+..||..+........-........+..-++...+.||.++.+.+||..+.......... ..-
T Consensus 974 ~~l~~g~~~----g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~v 1047 (1249)
T 3sfz_A 974 EYVAFGDED----GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQ--ETV 1047 (1249)
T ss_dssp SEEEEEETT----SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCS--SCE
T ss_pred CEEEEEcCC----CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCC--CcE
Confidence 344455433 35677887765543221111111111222235777888999999999999998876543222 222
Q ss_pred eEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 401 LGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 401 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
.+++...+..++.|+.+ ..+..||..+++-
T Consensus 1048 ~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1048 KDFRLLQDSRLLSWSFD-----GTVKVWNVITGRI 1077 (1249)
T ss_dssp EEEEECSSSEEEEEESS-----SEEEEEETTTTCC
T ss_pred EEEEEcCCCcEEEEECC-----CcEEEEECCCCce
Confidence 23333334445566654 4688999877653
No 361
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=57.03 E-value=6.5 Score=37.50 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=31.2
Q ss_pred echhhHHHHHHHHHhcCchhHHhHHHHhhhcccC
Q psy9769 130 VTEENVQMLLPAANLLQLTDVRDACCDFLQCQLH 163 (1026)
Q Consensus 130 i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~ 163 (1026)
++.+|+..++.+|+.|+++.|.+.|.+|+.+++.
T Consensus 132 l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 132 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999998754
No 362
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=56.86 E-value=42 Score=26.53 Aligned_cols=51 Identities=12% Similarity=-0.063 Sum_probs=36.4
Q ss_pred EEEEEEEEEe---cceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEE
Q psy9769 952 LVWGVLKEKM---PGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKY 1007 (1026)
Q Consensus 952 ~v~G~V~~i~---~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~v 1007 (1026)
...|+|+... -|| ||.-.+ +=+=++|.++|..... ..+++||.|++.+..=
T Consensus 5 ~~~G~Vk~fn~~kGfG-FI~~~~g~~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~~ 59 (71)
T 3i2z_B 5 KIKGNVKWFNESKGFG-FITPEDGSKDVFVHFSAIQTNGF----KTLAEGQRVEFEITNG 59 (71)
T ss_dssp CEEEEEEEEETTTTEE-EEEETTCCCCEEEEGGGBCCSSC----CCCCTTCEEEEEEEEE
T ss_pred cccEEEEEEECCCCcE-EEecCCCCccEEEEhHHcccccC----cCCCCCCEEEEEEEEC
Confidence 4689999874 366 555544 4788999999964322 3468999999988653
No 363
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=56.18 E-value=57 Score=38.73 Aligned_cols=64 Identities=13% Similarity=0.231 Sum_probs=39.8
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
++.+++.||.++.+.+||..+.+-.. .+.....-++++...+..++++|.+ ..+..||..+++-
T Consensus 572 dg~~l~sg~~Dg~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 572 DGSLCASGGKDGVVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSI 635 (694)
T ss_dssp TSSEEEEEETTSBCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCC
Confidence 57888899999999999998876332 2222222333343334344444433 4588899887654
No 364
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=54.80 E-value=1.8e+02 Score=30.82 Aligned_cols=95 Identities=13% Similarity=0.210 Sum_probs=56.0
Q ss_pred CcEEEEEECC---CC--cEEE-cCCCCcc-------cc-ceeeEEE--CCEEEEEeccC-CCeEEEeCCCC---eEEeCC
Q psy9769 333 IRSVECYDFK---TE--RWQS-VAEMPTR-------RC-RAGLVFL--HEKVYAVGGFN-GSLRVYDPSTN---EWSSAP 392 (1026)
Q Consensus 333 ~~~~~~yd~~---~~--~W~~-~~~~p~~-------r~-~~~~~~~--~~~iyv~GG~~-~~~~~yd~~~~---~W~~~~ 392 (1026)
.+.+.+||+. ++ .|.. ++..... +. .+.-.++ +|.+||.|-.. +.++++++... .|-.-.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 4679999987 33 4543 2221111 22 1222333 58999998888 88999999754 265433
Q ss_pred CCcCCccee-EEEEE-CC-EEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 393 PMEARRSTL-GVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 393 ~~p~~r~~~-~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
+.+..+.+. +++.. ++ .|++..+ . ..++.||+.+.
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~~~p 216 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDVSKP 216 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEECSSS
T ss_pred CCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcCCCC
Confidence 334445544 44444 34 5666654 3 56889998743
No 365
>2yty_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=54.41 E-value=31 Score=28.65 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=40.7
Q ss_pred CCCcEEEEEEEEEecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEE
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQIL 1005 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl 1005 (1026)
..++...|+|+...+--=||+-++ +-+=|+|.++|... ...+++||.|++.+.
T Consensus 14 ~~~~~~~G~Vk~f~kGfGFI~~ddgg~DvFvH~S~i~~~-----~~~L~~G~~V~F~~~ 67 (88)
T 2yty_A 14 SNSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFSGD-----VDSLELGDMVEYSLS 67 (88)
T ss_dssp SSCCCEEEEEEEECSSEEEEECSSSSCEEEEETTTCCSC-----TTTCCTTCEEEECCC
T ss_pred CCCCceeEEEEEEECCccEEecCCCCceEEEEEhhhccc-----cCcCCCCCEEEEEEE
Confidence 457889999998865446777665 58899999999543 245789999998765
No 366
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=54.15 E-value=1.1e+02 Score=32.81 Aligned_cols=121 Identities=13% Similarity=0.260 Sum_probs=75.8
Q ss_pred CCCcEE--EcCCCCccccceeeEEECCEEEEEeccCCCe------EE-----EeCCCCe-EEeCCCC-cCCcceeEEEEE
Q psy9769 342 KTERWQ--SVAEMPTRRCRAGLVFLHEKVYAVGGFNGSL------RV-----YDPSTNE-WSSAPPM-EARRSTLGVAVL 406 (1026)
Q Consensus 342 ~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~------~~-----yd~~~~~-W~~~~~~-p~~r~~~~~~~~ 406 (1026)
..+.|+ .++..|..-.-|+.|.+++.=|++|=.++++ .. |+..... =+.++.- ....+..+.-.+
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyY 347 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYY 347 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhh
Confidence 345565 3556666666789999998888998666542 12 2222222 2333322 222334455578
Q ss_pred CCEEEEEe-ccCCCCCCCEEEEEECCCCcEEEcc-CCCCCcceeEEEEECCEEEEEeC
Q psy9769 407 NSLIYAVG-GFDGSSGLNSAEVYDPSTEKWNMIA-PMSTRRSSVGVGVLNGCLYAENL 462 (1026)
Q Consensus 407 ~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG 462 (1026)
+|.+|+.- |..+...-+++.+-+.....|+.+. +-..-......+..++.||+||-
T Consensus 348 dgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp TTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred CCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 99999985 4444445577888888888999775 22233344556788999999985
No 367
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=54.10 E-value=74 Score=33.07 Aligned_cols=137 Identities=13% Similarity=0.220 Sum_probs=72.3
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCC-cEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCC-CeEEeCCCCc
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTE-RWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPST-NEWSSAPPME 395 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~-~~W~~~~~~p 395 (1026)
++.+|+... -..+++||+... .|..-. +.+.. .+.+. -++.||+.. +.+++||... ..|+...+.+
T Consensus 147 ~g~l~vgt~-----~~~l~~~d~~g~~~~~~~~--~~~~~-~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~ 215 (330)
T 3hxj_A 147 DGTIYVGSN-----DNYLYAINPDGTEKWRFKT--NDAIT-SAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAGYW 215 (330)
T ss_dssp TSCEEEECT-----TSEEEEECTTSCEEEEEEC--SSCCC-SCCEECTTCCEEEES---SSEEEECTTSCEEEEECCSSC
T ss_pred CCEEEEEcC-----CCEEEEECCCCCEeEEEec--CCCce-eeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccCCc
Confidence 556666432 247899999822 365432 22222 22333 367888754 7899999542 3476543221
Q ss_pred CCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCc-EEEccCCCCCcceeEEEEE-CCEEEEEeCCCceeeEEcC
Q psy9769 396 ARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEK-WNMIAPMSTRRSSVGVGVL-NGCLYAENLDGRILGCVKE 472 (1026)
Q Consensus 396 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 472 (1026)
. ..+.+.. +|.||+... + ..+.+||+.... |.....- .... +.+.. ++.||+....+.+..++..
T Consensus 216 ~---~~~~~~~~~g~l~v~t~-~-----~gl~~~~~~g~~~~~~~~~~--~~~~-~~~~~~~g~l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 216 T---VTRPAISEDGTIYVTSL-D-----GHLYAINPDGTEKWRFKTGK--RIES-SPVIGNTDTIYFGSYDGHLYAINPD 283 (330)
T ss_dssp C---CSCCEECTTSCEEEEET-T-----TEEEEECTTSCEEEEEECSS--CCCS-CCEECTTSCEEEECTTCEEEEECTT
T ss_pred c---eeceEECCCCeEEEEcC-C-----CeEEEECCCCCEeEEeeCCC--Cccc-cceEcCCCeEEEecCCCCEEEECCC
Confidence 1 1122333 557887532 1 468888875444 5543221 1111 12233 6788887666677777753
Q ss_pred cc-cEEE
Q psy9769 473 IT-DWGL 478 (1026)
Q Consensus 473 ~~-~W~~ 478 (1026)
.. .|..
T Consensus 284 g~~~~~~ 290 (330)
T 3hxj_A 284 GTEKWNF 290 (330)
T ss_dssp SCEEEEE
T ss_pred CcEEEEE
Confidence 22 3654
No 368
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=54.06 E-value=45 Score=35.83 Aligned_cols=102 Identities=10% Similarity=0.015 Sum_probs=58.4
Q ss_pred cEEEEEECCCCcEEEcCCCCccccce-eeEE-ECCE-EEEEecc--CCC--eEEEeCCCCeEEeCCCCcCCcceeEEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRA-GLVF-LHEK-VYAVGGF--NGS--LRVYDPSTNEWSSAPPMEARRSTLGVAVL 406 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~-iyv~GG~--~~~--~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 406 (1026)
..++.+|..+..+..+.. ..+.... ..+. -+|+ |+..+-. ... +++||+.+.+...+..++. .. ....-
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~ 291 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSN 291 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEEC
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccC
Confidence 578999998888877755 2211111 1222 2444 4444322 224 8999999887766554432 12 22233
Q ss_pred -CCEEEEEeccCC-----------CCCCCEEEEEECCCCcEEEcc
Q psy9769 407 -NSLIYAVGGFDG-----------SSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 407 -~~~iyv~GG~~~-----------~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
+|+++++++... ......++.+|+.+++...+.
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 677776655321 112368999999888776554
No 369
>1wfq_A UNR protein; beta-barrel, translational regulation, RNA chaperone, RNA/DN binding, QB fold, greek-KEY topology, structur genomics; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=52.65 E-value=59 Score=27.04 Aligned_cols=54 Identities=7% Similarity=0.019 Sum_probs=40.2
Q ss_pred CcEEEEEEEEEecceEEEEeCCC-ceeeEeccccCcccccCcccccccCCEEEEEEEEEe
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDGD-ISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYE 1008 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~~-i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd 1008 (1026)
.+..+|+|+....--=||+-+++ -+=|+|.++|... ...+++||.|++.|..-+
T Consensus 16 ~~~~~G~Vkwf~KGfGFI~~ddgg~DVFvH~s~i~~~-----~~~L~~G~~V~F~v~~~~ 70 (89)
T 1wfq_A 16 ALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGN-----LQDLKVGDDVEFEVSSDR 70 (89)
T ss_dssp CCEEEEEEEEECSSEEEEEETTTTEEEEEETTTCSSC-----TTTCCTTCCEEEEEEECS
T ss_pred ccccceEEEEEeCCeeEEecCCCCccEEEEhHHhhCc-----cCCCCCCCEEEEEEEECC
Confidence 57889999988532256666654 7899999999543 245789999999886543
No 370
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=52.12 E-value=1.4e+02 Score=35.20 Aligned_cols=63 Identities=14% Similarity=0.113 Sum_probs=37.0
Q ss_pred CeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCC-cEEEcc
Q psy9769 377 SLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTE-KWNMIA 439 (1026)
Q Consensus 377 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~ 439 (1026)
.+++||..+.+...+............+.+ +|+..+++..+.......++.+|+.++ .+..+.
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 578899998876655432212222223333 666445544444334468999999988 776553
No 371
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=51.10 E-value=1.7e+02 Score=30.89 Aligned_cols=64 Identities=13% Similarity=0.107 Sum_probs=39.2
Q ss_pred CCEEEEEeccCCC-eEEEeCCCCeEEe-CCCCcCCcceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 365 HEKVYAVGGFNGS-LRVYDPSTNEWSS-APPMEARRSTLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 365 ~~~iyv~GG~~~~-~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
++.+.+.|+.+++ +.+||..+.+-.. +..-.....-.+++. -+++.++.|+.+ ..+..||..+.
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 6788889999998 9999998765321 110001111122222 267777887765 56888887543
No 372
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=51.09 E-value=1.2e+02 Score=31.39 Aligned_cols=103 Identities=9% Similarity=0.200 Sum_probs=55.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-------CCEEEEEeccCCCeEEEeCCCCeEEeC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-------HEKVYAVGGFNGSLRVYDPSTNEWSSA 391 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~~yd~~~~~W~~~ 391 (1026)
++.+++.|+.+ ..+..||.....-..+..-... -.++... ++..++.||.++.+.+||..+.+-...
T Consensus 118 ~~~~l~s~s~D----~~i~vwd~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 191 (319)
T 3frx_A 118 KASMIISGSRD----KTIKVWTIKGQCLATLLGHNDW--VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191 (319)
T ss_dssp TSCEEEEEETT----SCEEEEETTSCEEEEECCCSSC--EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCeEEEEeccCCc--EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee
Confidence 34556666654 3577778765433332211110 1111111 344678888999999999987654321
Q ss_pred CCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 392 PPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 392 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+........++.+ ++++++.||.+ ..+..||..+.+
T Consensus 192 --~~~h~~~v~~~~~sp~g~~l~s~~~d-----g~i~iwd~~~~~ 229 (319)
T 3frx_A 192 --FIGHNSNINTLTASPDGTLIASAGKD-----GEIMLWNLAAKK 229 (319)
T ss_dssp --ECCCCSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTTE
T ss_pred --ecCCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCc
Confidence 1111111122222 67778888865 468899987765
No 373
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=50.71 E-value=56 Score=41.17 Aligned_cols=106 Identities=18% Similarity=-0.015 Sum_probs=62.3
Q ss_pred cEEE-EEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEECCEEEE
Q psy9769 334 RSVE-CYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYA 412 (1026)
Q Consensus 334 ~~~~-~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 412 (1026)
..++ .||..+.....+.. ........+..-+|+..++++.++++++||+.+.+-..+..-........+..-+|+.++
T Consensus 358 ~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la 436 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 436 (1045)
T ss_dssp EEEEEEEETTTCCEEECCC-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred CceEEEEECCCCCceEecC-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence 4788 89998887776651 111222222223566667777788999999998876554321111112222233676666
Q ss_pred EeccCC-----CCCCCEEEEEECCCCcEEEccC
Q psy9769 413 VGGFDG-----SSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 413 ~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
+++.++ ......++.||+.+++...+..
T Consensus 437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 437 YGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp EEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred EEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 665432 1223689999999887665543
No 374
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.43 E-value=59 Score=35.81 Aligned_cols=108 Identities=16% Similarity=0.108 Sum_probs=62.9
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCc-EEEccCC
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEK-WNMIAPM 441 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~ 441 (1026)
++.||+....++.+.+||+.+++-..+.... ...+ .+.. ++.||+.....+ ..++.+|+.++. ...+...
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEEEEEC
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEEeeec
Confidence 5899999887788999999987655443221 1112 2222 346777644221 289999986543 2344211
Q ss_pred C--CCcceeEEEEE--CCEEEEEeCCCceeeEEcCcccEEEe
Q psy9769 442 S--TRRSSVGVGVL--NGCLYAENLDGRILGCVKEITDWGLI 479 (1026)
Q Consensus 442 p--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~W~~~ 479 (1026)
+ .....+++++. ++.||+....+.+..++..+.....+
T Consensus 214 ~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred cchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 1 11222233333 68999976666777888766554444
No 375
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=50.38 E-value=1.9e+02 Score=28.23 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=57.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcE---EEcCC--CCccccceeeEEE---CCEEEEEeccCCCeEEEeCCCCeEEe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERW---QSVAE--MPTRRCRAGLVFL---HEKVYAVGGFNGSLRVYDPSTNEWSS 390 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~yd~~~~~W~~ 390 (1026)
.+.+|++-| +..|+|+..+-.- ..+.. +|..-..--+|+. ++++|+|-| +..|+||..+++=..
T Consensus 79 ~~~iyfFkG------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~ 150 (207)
T 1pex_A 79 HDLIFIFRG------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDK 150 (207)
T ss_dssp TTEEEEEET------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECS
T ss_pred CCcEEEEcc------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccC
Confidence 478888877 3677776432111 12322 2221112233332 489999966 468899987654221
Q ss_pred C---------CCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 391 A---------PPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 391 ~---------~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
. +.+|. + -.++...+|++|.|-| +..++||..+.+=
T Consensus 151 gyPr~i~~~~~Gip~-~-iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v 195 (207)
T 1pex_A 151 DYPRLIEEDFPGIGD-K-VDAVYEKNGYIYFFNG-------PIQFEYSIWSNRI 195 (207)
T ss_dssp SCCCBHHHHSTTSCS-C-CSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred CCCccHHHcCCCCCC-C-ccEEEEcCCcEEEEEC-------CEEEEEeCCccEE
Confidence 1 12232 1 2344456999999987 6788999876653
No 376
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=49.75 E-value=64 Score=34.66 Aligned_cols=106 Identities=8% Similarity=0.024 Sum_probs=58.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCC--CCccccce-eeE-EECCEEEEEeccCCCeEEEeCCCCeEEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAE--MPTRRCRA-GLV-FLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~ 394 (1026)
++..++.++.+......++.+|.....+..... +......- +++ .-+|++.+.|+.++.+.+||..+.+-.. .+
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~--~~ 307 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK--IF 307 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE--EE
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE--Ee
Confidence 455566665443333456667766655543221 11111111 222 2368888999999999999998865321 11
Q ss_pred cCCcce-eEEEEE--CCEEEEEeccCCCCCCCEEEEEECC
Q psy9769 395 EARRST-LGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPS 431 (1026)
Q Consensus 395 p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 431 (1026)
...... -.++.+ ++++++.|+.+ ..+-+||..
T Consensus 308 ~~gH~~~V~~v~fSpdg~~laS~S~D-----~tvrvw~ip 342 (365)
T 4h5i_A 308 KQAHSFAITEVTISPDSTYVASVSAA-----NTIHIIKLP 342 (365)
T ss_dssp TTSSSSCEEEEEECTTSCEEEEEETT-----SEEEEEECC
T ss_pred cCcccCCEEEEEECCCCCEEEEEeCC-----CeEEEEEcC
Confidence 111111 122333 78888888765 567778763
No 377
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=49.44 E-value=21 Score=28.22 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=29.6
Q ss_pred CcEEEEEEEEEec--ceEEEEeCCCceeeEeccccCc
Q psy9769 950 GRLVWGVLKEKMP--GGVRVEFDGDISGVFPTSAMSQ 984 (1026)
Q Consensus 950 G~~v~G~V~~i~~--~G~fV~~~~~i~Gl~~~~~ls~ 984 (1026)
|.-+-|+|++|.. .-|+|+|+++-+-.++.++|..
T Consensus 40 GlfYLGTI~kV~~~~e~ClV~F~D~S~~W~~~kdi~~ 76 (79)
T 2m0o_A 40 GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISP 76 (79)
T ss_dssp SCCCEEEEEEEETTTTEEEEEETTSCEEEEETTTBCC
T ss_pred CCEEeEEEEEeccCCCEEEEEEcCCCeEEEEeecccc
Confidence 7778899999875 3499999999999999988853
No 378
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=49.38 E-value=2.7e+02 Score=29.79 Aligned_cols=109 Identities=11% Similarity=-0.095 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEe---------ccCCCeEEEeCCCCe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVG---------GFNGSLRVYDPSTNE 387 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G---------G~~~~~~~yd~~~~~ 387 (1026)
+..+|+.-+........+..||+.+.+ .+..+|..... ..+.. +..+|+.. ..++.+.+||+.+.+
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~--~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGS--ILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCe--EEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 457888865111111188999998765 34445544333 33332 45899984 234578899998754
Q ss_pred EE-eCCCCc-CCc-----ceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 388 WS-SAPPME-ARR-----STLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 388 W~-~~~~~p-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
-. .++ ++ .+| .-...+. -+..+|+..-. ..+.+..+| .+++-.
T Consensus 109 ~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 109 PIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEEE-CCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 21 111 11 111 1112222 24567776321 136799999 877543
No 379
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=49.11 E-value=88 Score=36.03 Aligned_cols=113 Identities=13% Similarity=0.021 Sum_probs=62.9
Q ss_pred EEEEEcCC-CCCCCcEEEEEEC--CCCcEEEcCCCCccccceeeEEEC-CEEEEEeccCCCeEEEeCCCCeEEeCCCCcC
Q psy9769 321 VMLVVGGQ-APKAIRSVECYDF--KTERWQSVAEMPTRRCRAGLVFLH-EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA 396 (1026)
Q Consensus 321 ~i~v~GG~-~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~ 396 (1026)
.+++.+.. .+.....++..+. .... ..+...+..+ ..+...+ +.++++.+..+...+||..+.+...+...+.
T Consensus 76 ~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~ 152 (582)
T 3o4h_A 76 RVILVRDVSKGAEQHALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG 152 (582)
T ss_dssp EEEEEEECSTTSCCEEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS
T ss_pred eEEEEeccCCCCcceEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC
Confidence 44444332 2223446777887 4433 2444333322 2233444 4566666666666799998887766653332
Q ss_pred CcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccC
Q psy9769 397 RRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 397 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
...+..-+|+..++++.+... ...++.+|+.++++..+..
T Consensus 153 ---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 153 ---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp ---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECC
T ss_pred ---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeec
Confidence 222333466655555543221 2469999999999887754
No 380
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=49.01 E-value=11 Score=32.71 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=30.0
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELHF 194 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~ 194 (1026)
++.+|+..++..|+.|++..|.+.|.+|+.+++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 667899999999999999999999999998763
No 381
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=48.99 E-value=1.8e+02 Score=33.58 Aligned_cols=105 Identities=11% Similarity=0.211 Sum_probs=60.1
Q ss_pred EEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccc-eeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEe-CCC--C--
Q psy9769 322 MLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCR-AGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSS-APP--M-- 394 (1026)
Q Consensus 322 i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~--~-- 394 (1026)
.++.|+.+ ..+..||..+.+.. ..+...... .+++. -++.+++.||.++.+.+||..+.+... +.. +
T Consensus 162 ~l~s~s~D----~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 162 RIISGSDD----NTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp EEEEEETT----SCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred EEEEEeCC----CeEEEEECCCCeEe--eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 46666654 35777886654332 222221111 12222 257888899999999999988776432 211 0
Q ss_pred -cCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEE
Q psy9769 395 -EARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM 437 (1026)
Q Consensus 395 -p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 437 (1026)
.....-.+++.. +++.++.||.+ ..+..||+.+.+...
T Consensus 236 ~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 236 VAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEK 275 (611)
T ss_dssp CSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred cccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceee
Confidence 111111122222 67777888765 578899998887654
No 382
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=48.48 E-value=1.6e+02 Score=34.39 Aligned_cols=114 Identities=15% Similarity=0.063 Sum_probs=69.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccc----c---ceeeEEE-CCEEEEEeccCCC--eEEEeCCCCeE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRR----C---RAGLVFL-HEKVYAVGGFNGS--LRVYDPSTNEW 388 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~iyv~GG~~~~--~~~yd~~~~~W 388 (1026)
++.+|+.+..++ ...++.+|+.+.+|..+.+..... . ....+.. ++++++.+.. +. ++.+|..+...
T Consensus 252 dg~l~~~~~~~~--~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 252 DGSLIVATDRTG--WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGEL 328 (662)
T ss_dssp TSCEEEEECTTS--SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEE
T ss_pred CCeEEEEECCCC--CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcE
Confidence 445776665432 347999999889999876533221 1 1223333 6778777766 65 45558888887
Q ss_pred EeCCCCcCCcceeEE-EEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 389 SSAPPMEARRSTLGV-AVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 389 ~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
+.+..- .. ..... ..-++.+++..+... ....++.+|+.+++.+.+.
T Consensus 329 ~~l~~~-~~-~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 329 VDAAGP-WT-EWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EECCSS-CC-EEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEEE
T ss_pred EEecCC-CC-eEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEee
Confidence 776432 11 11222 334666666654322 2357889999988887764
No 383
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=47.91 E-value=2.6e+02 Score=29.06 Aligned_cols=142 Identities=11% Similarity=0.076 Sum_probs=80.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcC--CCCccccceeeEEE--CCEEEEEeccC-CCeEEEeCCCCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVA--EMPTRRCRAGLVFL--HEKVYAVGGFN-GSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~-~~~~~yd~~~~~W~~~~~ 393 (1026)
++.||+.-. ....+..+|+....-..+. .+..| ..+++- ++.||+..-.. +.++++++....-+.+..
T Consensus 88 ~~~ly~~d~----~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~ 160 (316)
T 1ijq_A 88 HSNIYWTDS----VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 160 (316)
T ss_dssp TTEEEEEET----TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred CCeEEEEEC----CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE
Confidence 567777633 2357888888765433332 22223 234443 68999986433 678999886543333211
Q ss_pred CcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCC-CCCcceeEEEEECCEEEEEeC-CCceeeE
Q psy9769 394 MEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPM-STRRSSVGVGVLNGCLYAENL-DGRILGC 469 (1026)
Q Consensus 394 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~lyv~GG-~~~~~~~ 469 (1026)
-.. ..-.+.+.- +++||+.-.. ...++++|+....-+.+... .......++++.++.+|+.-. .+.+..+
T Consensus 161 ~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 161 ENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSA 234 (316)
T ss_dssp SSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred CCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEE
Confidence 111 122344443 6899998532 36899999875443333221 112233566777899999864 4566666
Q ss_pred EcCc
Q psy9769 470 VKEI 473 (1026)
Q Consensus 470 ~~~~ 473 (1026)
+..+
T Consensus 235 ~~~~ 238 (316)
T 1ijq_A 235 NRLT 238 (316)
T ss_dssp ETTT
T ss_pred eCCC
Confidence 6543
No 384
>3aqq_A Calcium-regulated heat stable protein 1; compact beta-barrel, cold shock domain, ssDNA binding, DNA B protein; 2.80A {Homo sapiens}
Probab=47.89 E-value=41 Score=30.96 Aligned_cols=51 Identities=14% Similarity=-0.003 Sum_probs=38.6
Q ss_pred CcEEEEEEEEEe---cceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEE
Q psy9769 950 GRLVWGVLKEKM---PGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKY 1007 (1026)
Q Consensus 950 G~~v~G~V~~i~---~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~v 1007 (1026)
|+...|+|+... -|| ||+-++ +=+=|+|.++|... ..+.+||.|++.|...
T Consensus 60 g~m~~GtVKwFn~~KGfG-FI~~ddGg~DVFVH~Sai~~~------~~L~eGq~V~Fev~~~ 114 (147)
T 3aqq_A 60 GPVYKGVCKCFCRSKGHG-FITPADGGPDIFLHISDVEGE------YVPVEGDEVTYKMCSI 114 (147)
T ss_dssp SCCEEEEEEEEETTTTEE-EEEESSSCSCEEEEGGGEESS------BCCCTTCEEEEEEEEC
T ss_pred CCccceEEEEEeCCCCeE-EeccCCCCccEEEEeeeecCC------CcCCCCCEEEEEEEec
Confidence 888999999873 355 555554 47899999999422 2688999999988754
No 385
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=46.99 E-value=2.9e+02 Score=32.49 Aligned_cols=143 Identities=13% Similarity=0.069 Sum_probs=77.1
Q ss_pred CcEEEEEECCCC--cEEEcCCCCccccceeeEEECCEEEEEeccC---CCeEEEeCCCC---eEEeCCCCcCCcceeEEE
Q psy9769 333 IRSVECYDFKTE--RWQSVAEMPTRRCRAGLVFLHEKVYAVGGFN---GSLRVYDPSTN---EWSSAPPMEARRSTLGVA 404 (1026)
Q Consensus 333 ~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~ 404 (1026)
.+.++.+|..+. .|..+.+-...... .....++.+|+....+ ..++.+|+.+. .|+.+.+-.... . +..
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s 334 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVH 334 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEE
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-E-EEE
Confidence 368999998765 67776543222222 2344578999987553 46888888763 487654322222 2 444
Q ss_pred EECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCC----CceeeEEcCcccEEE
Q psy9769 405 VLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLD----GRILGCVKEITDWGL 478 (1026)
Q Consensus 405 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~----~~~~~~~~~~~~W~~ 478 (1026)
..++.|++..-.++ ...++.+|+.++....++ +|..........- ++.+++.... +.++.++..+.+++.
T Consensus 335 ~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 335 SGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred EECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 55777766544332 357899998866555443 3332221111111 2344443321 345555555555655
Q ss_pred eecC
Q psy9769 479 IIEL 482 (1026)
Q Consensus 479 ~~~l 482 (1026)
+...
T Consensus 411 l~~~ 414 (693)
T 3iuj_A 411 YRAS 414 (693)
T ss_dssp EECC
T ss_pred EEeC
Confidence 5443
No 386
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=46.74 E-value=2.2e+02 Score=27.82 Aligned_cols=135 Identities=12% Similarity=0.050 Sum_probs=71.1
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE--c----CCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeE--
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS--V----AEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEW-- 388 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W-- 388 (1026)
.+.+|+|=| +.+|+++.....+.. + +.+|.. -. ++... ++++|+|-|. ..|+|+..+-.-
T Consensus 33 ~g~~y~Fkg------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG~--~~w~~~~~~~~~gy 102 (207)
T 1pex_A 33 RGETMIFKD------RFFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRGR--KFWALNGYDILEGY 102 (207)
T ss_dssp TTEEEEEET------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEETT--EEEEESTTCCCTTC
T ss_pred CCcEEEEEC------CEEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEccC--EEEEEeCCeeccCC
Confidence 456777766 357777765544432 1 234421 12 22223 5899999663 577776432211
Q ss_pred -EeCCC--CcCCccee-EEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEE-----c----cCCCCCcceeEEEEE
Q psy9769 389 -SSAPP--MEARRSTL-GVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM-----I----APMSTRRSSVGVGVL 453 (1026)
Q Consensus 389 -~~~~~--~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~~r~~~~~~~~ 453 (1026)
+.+.. +|..-..- ++... ++++|+|-| +..|+||..+++=.. + +.+|. .-.++...
T Consensus 103 Pk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~--~iDaAf~~ 173 (207)
T 1pex_A 103 PKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD--KVDAVYEK 173 (207)
T ss_dssp SEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSCS--CCSEEEEE
T ss_pred ceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCCC--CccEEEEc
Confidence 12222 23211122 22333 489999987 678999987643210 1 12221 12244456
Q ss_pred CCEEEEEeCCCceeeEEcCc
Q psy9769 454 NGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 454 ~~~lyv~GG~~~~~~~~~~~ 473 (1026)
++++|.|-|. ..+.|+...
T Consensus 174 ~g~~YfFkg~-~y~rf~~~~ 192 (207)
T 1pex_A 174 NGYIYFFNGP-IQFEYSIWS 192 (207)
T ss_dssp TTEEEEEETT-EEEEEETTT
T ss_pred CCcEEEEECC-EEEEEeCCc
Confidence 9999999774 445555543
No 387
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=46.47 E-value=2.7e+02 Score=28.89 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=72.9
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCC----CeEEe-CC-CCcCCcceeEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPST----NEWSS-AP-PMEARRSTLGVAV 405 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~----~~W~~-~~-~~p~~r~~~~~~~ 405 (1026)
+.+..+|+.+.....+.+ ....-+++++. ++.||+.....+.++++++.+ ..... ++ .+..| .+.++
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAV 84 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC---CEEEE
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEE
Confidence 357888888877665422 22222444444 579999988788899999876 22222 11 22222 23444
Q ss_pred --ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEE--CCEEEEEeCC--CceeeEEcCc
Q psy9769 406 --LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVL--NGCLYAENLD--GRILGCVKEI 473 (1026)
Q Consensus 406 --~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~--~~~~~~~~~~ 473 (1026)
.++.||+.-.. ...++++|+....-..+. .+..| .++++- ++.||+.... +.+..++.+.
T Consensus 85 d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 85 DWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp ETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 37899998432 268999998765444332 23333 233443 6899988632 4566666543
No 388
>1gut_A Mopii, molybdate binding protein II; transport protein; 1.50A {Clostridium pasteurianum} SCOP: b.40.6.1 PDB: 1gun_A 1guo_A 1gus_A 1gug_A
Probab=46.36 E-value=29 Score=26.90 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=29.6
Q ss_pred cEEEEEEEEEecce----EEEEeCCC--ceeeEeccccCcccccCcccccccCCEEEEEE
Q psy9769 951 RLVWGVLKEKMPGG----VRVEFDGD--ISGVFPTSAMSQATRTLVYTRFVIDTVIVCQI 1004 (1026)
Q Consensus 951 ~~v~G~V~~i~~~G----~fV~~~~~--i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~V 1004 (1026)
+.+.|+|+++...| +.+++.++ +...++...+ ++ -.+++||.|.+.|
T Consensus 7 N~l~g~V~~i~~~g~~~~V~l~~~~g~~l~a~it~~s~-----~~--l~L~~G~~V~a~i 59 (68)
T 1gut_A 7 NQLKGKVVGLKKGVVTAEVVLEIAGGNKITSIISLDSV-----EE--LGVKEGAELTAVV 59 (68)
T ss_dssp CEEEEEEEEEEECSSEEEEEEEETTSCEEEEEEEHHHH-----HH--HTCCTTCEEEEEC
T ss_pred eEEEEEEEEEEeCCceEEEEEEeCCCCEEEEEeCHHHH-----HH--CCCCCCCEEEEEE
Confidence 67999999999888 33344333 3434443322 11 2478999998764
No 389
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=46.34 E-value=61 Score=25.24 Aligned_cols=50 Identities=12% Similarity=-0.075 Sum_probs=35.1
Q ss_pred EEEEEEEE---ecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEEEE
Q psy9769 953 VWGVLKEK---MPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKY 1007 (1026)
Q Consensus 953 v~G~V~~i---~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~v 1007 (1026)
.+|+|+.. +-|| ||.-++ +=+=++|.+.|..... ..+++||.|++.+..=
T Consensus 2 ~~G~Vk~fn~~kGfG-FI~~~~gg~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~~ 55 (67)
T 3cam_A 2 ATGIVKWFNDAKGFG-FITPDEGGEDLFAHFSAINMEGF----KTLKEGQRVSFDVTTG 55 (67)
T ss_dssp EEEEEEEEETTTTEE-EEEETTSCCCEEEEGGGBCGGGG----SSCCTTCEEEEEEEEE
T ss_pred CCEEEEEEECCCCeE-EEecCCCCccEEEEHHHccccCC----CCCCCCCEEEEEEEEC
Confidence 36899876 3355 445444 6789999999954322 3468999999988653
No 390
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=46.30 E-value=1.1e+02 Score=30.36 Aligned_cols=99 Identities=8% Similarity=-0.021 Sum_probs=52.9
Q ss_pred ECCEEEEEeccCCCeEEEe--CCC-------------CeEEeCCCCc-CCcceeEEEEE--CCEEEEEeccCCCCCCCEE
Q psy9769 364 LHEKVYAVGGFNGSLRVYD--PST-------------NEWSSAPPME-ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSA 425 (1026)
Q Consensus 364 ~~~~iyv~GG~~~~~~~yd--~~~-------------~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v 425 (1026)
.+|++|+|-| +..|+|+ +.+ ..|.-++.-. ..... ++... ++++|+|-| +..
T Consensus 71 ~~g~~~fFKg--~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~ID-AA~~~~~~~k~yfFkG-------~~y 140 (227)
T 3lp9_A 71 ENNEAFIFYE--NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGID-AAYRSTRGKEVYLFKG-------DQY 140 (227)
T ss_dssp STTEEEEEET--TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCS-EEEECSSTTEEEEEET-------TEE
T ss_pred CCCEEEEEeC--CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCccc-EEEEECCCCEEEEEEC-------CEE
Confidence 5799999976 3578888 321 1132232110 11222 23333 689999988 679
Q ss_pred EEEECCCCcEE-----Ecc-CCCCC------cceeEEEE--ECCEEEEEeCCCceeeEEcCc
Q psy9769 426 EVYDPSTEKWN-----MIA-PMSTR------RSSVGVGV--LNGCLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 426 ~~yd~~~~~W~-----~~~-~~p~~------r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~ 473 (1026)
|+||..+++-. .+. .+|.. ..--++.. .++++|.|-|. ..+.|+...
T Consensus 141 w~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-~Ywr~d~~~ 201 (227)
T 3lp9_A 141 ARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD-HYARVKVTP 201 (227)
T ss_dssp EEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT-EEEEEECCS
T ss_pred EEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC-EEEEEECCc
Confidence 99998755321 111 12211 12223333 25899999873 344455433
No 391
>1fr3_A MOP, molybdate/tungstate binding protein; molybdate homeostasis, metal binding protein; 1.50A {Sporomusa ovata} SCOP: b.40.6.1
Probab=46.00 E-value=29 Score=26.70 Aligned_cols=48 Identities=13% Similarity=0.234 Sum_probs=29.5
Q ss_pred CcEEEEEEEEEecceE----EEEeCCC-ceeeEeccccCcccccCcccccccCCEEEEEE
Q psy9769 950 GRLVWGVLKEKMPGGV----RVEFDGD-ISGVFPTSAMSQATRTLVYTRFVIDTVIVCQI 1004 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~----fV~~~~~-i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~V 1004 (1026)
-+.+.|+|+++...|. .+++.++ +...++...+ .+ -.+++||.|.+.|
T Consensus 6 ~N~l~g~V~~i~~~g~~~~v~l~~~~~~l~a~it~~s~-----~~--l~L~~G~~V~~~i 58 (67)
T 1fr3_A 6 RNKLEATVKEIVKGTVMAKIVMDYKGTELVAAITIDSV-----AD--LDLVPGDKVTALV 58 (67)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTEEEEEEEEHHHH-----HH--HTCCTTCEEEEEE
T ss_pred ceEEEEEEEEEEeCCceEEEEEEeCCCEEEEEeCHHHH-----Hh--CCCCCCCEEEEEE
Confidence 4679999999998883 3333333 2333333222 11 2478999999865
No 392
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=45.62 E-value=2.6e+02 Score=32.23 Aligned_cols=93 Identities=14% Similarity=0.095 Sum_probs=52.8
Q ss_pred EEEEEECCCCcEEEcC-CCCc-cccceeeEE-ECCEEEEEeccCCCeEEEeCCCCe--------EEeCC-CCc-CCccee
Q psy9769 335 SVECYDFKTERWQSVA-EMPT-RRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNE--------WSSAP-PME-ARRSTL 401 (1026)
Q Consensus 335 ~~~~yd~~~~~W~~~~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~--------W~~~~-~~p-~~r~~~ 401 (1026)
.+..||..+ .+..+. .++. .+..++++. -+|+..+.||.++.+.+||..++. ...+. ... ....-.
T Consensus 108 ~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 108 NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE
Confidence 567777433 444443 2221 233444443 468888999999999999998763 12211 011 111223
Q ss_pred EEEEECCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 402 GVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 402 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+.+...+. ++.+|.+ +.+..||..++.
T Consensus 187 sVawSPdg-Laass~D-----~tVrlWd~~~~~ 213 (588)
T 2j04_A 187 HIVWYEDV-LVAALSN-----NSVFSMTVSASS 213 (588)
T ss_dssp EEEEETTE-EEEEETT-----CCEEEECCCSSS
T ss_pred EEEEcCCc-EEEEeCC-----CeEEEEECCCCc
Confidence 33444555 6777664 578888887665
No 393
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=44.77 E-value=2.4e+02 Score=32.54 Aligned_cols=109 Identities=8% Similarity=0.052 Sum_probs=63.7
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCc-cccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPT-RRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
++..++.|+.+ ..+..||..+.+....-+.+. .......+..++..++.++.++.+..||+.+..-...-.- ..
T Consensus 250 dg~~l~s~s~D----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~ 324 (611)
T 1nr0_A 250 DGTKIASASAD----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HN 324 (611)
T ss_dssp TSSEEEEEETT----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CS
T ss_pred CCCEEEEEeCC----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CC
Confidence 44556666644 478889998876654222211 1112223344777778888899999999887653221110 11
Q ss_pred cceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEc
Q psy9769 398 RSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 398 r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
....++.+ +++..+.|+.+ ..+..||..++.....
T Consensus 325 -~~v~~l~~spdg~~l~s~s~D-----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 325 -KAITALSSSADGKTLFSADAE-----GHINSWDISTGISNRV 361 (611)
T ss_dssp -SCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEC
T ss_pred -CCEEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeee
Confidence 11122222 67777777765 4688999988776543
No 394
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=44.33 E-value=3.3e+02 Score=29.27 Aligned_cols=127 Identities=12% Similarity=0.098 Sum_probs=75.9
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCC--CCcCCcceeEEEE--EC
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAP--PMEARRSTLGVAV--LN 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~ 407 (1026)
+.+..+++.......+.+- ...-.+++.. ++.||+.--..+.++++++.....+.+. .+..|. +.++ .+
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~---glavd~~~ 170 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG---GLAVDWVH 170 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC---CEEEETTT
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc---EEEEEeCC
Confidence 4678888887776655331 1222344443 5899999777778999999877655432 222222 2333 37
Q ss_pred CEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEE--CCEEEEEeC-C-CceeeEEcCc
Q psy9769 408 SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVL--NGCLYAENL-D-GRILGCVKEI 473 (1026)
Q Consensus 408 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG-~-~~~~~~~~~~ 473 (1026)
+.||+.-.. ...++++++....-+.+. .+..| .++++- ++.||+.-- . +.+..++.+.
T Consensus 171 g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 171 DKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp TEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 899998543 257889988765444332 22233 233343 678998853 3 4566666544
No 395
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=43.99 E-value=1.3e+02 Score=32.86 Aligned_cols=66 Identities=8% Similarity=0.052 Sum_probs=42.9
Q ss_pred CCEEEEEeccCCCeEEEeCCCCeEEe-CCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 365 HEKVYAVGGFNGSLRVYDPSTNEWSS-APPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 365 ~~~iyv~GG~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
++.+++.|+.++.+.+||..+.+-.. +...+... ...++.+ ++..++.|+.+ ..+..||+.+++..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 249 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG-AVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC-CEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-ceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEE
Confidence 47888899999999999998765322 11111111 2223333 67777888766 46889999876654
No 396
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=42.96 E-value=3.5e+02 Score=31.78 Aligned_cols=146 Identities=8% Similarity=-0.001 Sum_probs=73.9
Q ss_pred CcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCC----------------CeEEEeCCCCeEE--eCCC
Q psy9769 333 IRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNG----------------SLRVYDPSTNEWS--SAPP 393 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~----------------~~~~yd~~~~~W~--~~~~ 393 (1026)
...++.+|..+++...... +... ..+.+.. +|+-++++..+. .+++++..+.+.. .+..
T Consensus 150 ~~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~ 227 (710)
T 2xdw_A 150 WVTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE 227 (710)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC
T ss_pred eEEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec
Confidence 3489999999988765421 1111 1223332 444333333322 3788888876532 2211
Q ss_pred Cc-CCcceeEEE-EECCEEEEEeccCCCCCCCEEEEEECCC------C--cEEEccCCCCCcceeEEEEECCEEEEEeCC
Q psy9769 394 ME-ARRSTLGVA-VLNSLIYAVGGFDGSSGLNSAEVYDPST------E--KWNMIAPMSTRRSSVGVGVLNGCLYAENLD 463 (1026)
Q Consensus 394 ~p-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~ 463 (1026)
.+ .+....+.. .-+|+..+++...+....+.++.+|..+ . .|..+..-..... .....-++.||+.+..
T Consensus 228 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 228 FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNR 306 (710)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECT
T ss_pred cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECC
Confidence 11 222222222 2355544444332222247899999876 4 5877764332222 2233347788888753
Q ss_pred C----ceeeEEcCcc---cEEEeec
Q psy9769 464 G----RILGCVKEIT---DWGLIIE 481 (1026)
Q Consensus 464 ~----~~~~~~~~~~---~W~~~~~ 481 (1026)
+ .+..++..+. .|..+.+
T Consensus 307 ~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 307 HSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred CCCCCEEEEEeCCCCCcccceeccC
Confidence 3 3555555442 4766543
No 397
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=42.82 E-value=2.6e+02 Score=33.20 Aligned_cols=113 Identities=9% Similarity=0.085 Sum_probs=66.3
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCC--c-EEEcCCCCccccceeeEEECCEEEEEecc---CCCeEEEeCCC--CeEEeCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTE--R-WQSVAEMPTRRCRAGLVFLHEKVYAVGGF---NGSLRVYDPST--NEWSSAP 392 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~---~~~~~~yd~~~--~~W~~~~ 392 (1026)
.|++.........+.++.+|..+. . |..+.+........ +.-.++.||+.... +..++.+|..+ ..|+.+-
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 455544332223568999998876 6 88775433222222 23456788887643 34688899887 5798764
Q ss_pred CCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEc
Q psy9769 393 PMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMI 438 (1026)
Q Consensus 393 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 438 (1026)
+-.... -......++.+++....++ ...++.+|+..+.-..+
T Consensus 360 ~~~~~~-l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 360 PESKDN-LESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp CCCSSE-EEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEEC
T ss_pred cCCCCe-EEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeec
Confidence 322211 1223344888888776543 36788899765544443
No 398
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=42.67 E-value=3.2e+02 Score=28.67 Aligned_cols=59 Identities=12% Similarity=0.109 Sum_probs=31.6
Q ss_pred eccCCCeEEEeCCCCe-EEe-------------CCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCE-EEEEECCCCc
Q psy9769 372 GGFNGSLRVYDPSTNE-WSS-------------APPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNS-AEVYDPSTEK 434 (1026)
Q Consensus 372 GG~~~~~~~yd~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~ 434 (1026)
|+.++.+.+||..+.. +.. +..+..-.....++.+ ++++++.|+.+ .. +..||..+++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d-----~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD-----GTIIRVFKTEDGV 229 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT-----CSEEEEEETTTCC
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC-----CCEEEEEECCCCc
Confidence 5667888999987643 110 0001111111222333 67777888765 34 8889988765
Q ss_pred E
Q psy9769 435 W 435 (1026)
Q Consensus 435 W 435 (1026)
-
T Consensus 230 ~ 230 (355)
T 3vu4_A 230 L 230 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 399
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=42.52 E-value=1.9e+02 Score=30.75 Aligned_cols=115 Identities=12% Similarity=0.111 Sum_probs=69.4
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCC--CCcCCcceeEEEE--EC
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAP--PMEARRSTLGVAV--LN 407 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~ 407 (1026)
..+..+++.....+.+.+- ...-.+++.. ++.||+.--..+.++++++.....+.+. .+..| .+.++ .+
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~ 127 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVH 127 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTT
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc---cEEEEecCC
Confidence 3578888888777665321 1122334433 5899999777778999998876544432 22222 23344 37
Q ss_pred CEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEE--CCEEEEEe
Q psy9769 408 SLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVL--NGCLYAEN 461 (1026)
Q Consensus 408 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 461 (1026)
+.||+.-.. .+.++++++....-+.+. .+..|+ ++++- ++.||+..
T Consensus 128 g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td 177 (349)
T 3v64_C 128 DKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTD 177 (349)
T ss_dssp TEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEE
T ss_pred CeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEec
Confidence 899998543 258999998765544332 233332 33443 67888875
No 400
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=41.99 E-value=20 Score=32.56 Aligned_cols=36 Identities=8% Similarity=-0.058 Sum_probs=28.5
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhhhe
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELHFAEI 197 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~~l 197 (1026)
++.+|+.+++..|+.+++..|.+.|.+|+.+++..-
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 677899999999999999999999999999887543
No 401
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=41.76 E-value=42 Score=38.89 Aligned_cols=131 Identities=11% Similarity=-0.056 Sum_probs=68.6
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEAR 397 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~ 397 (1026)
+..+++++.+......++.+|..+.+++.+..-+... ...+..-+|+.++.+..++ .+++||+.+++...+......
T Consensus 161 G~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 239 (582)
T 3o4h_A 161 GDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKD 239 (582)
T ss_dssp TTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEE-EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSH
T ss_pred CCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCcc-ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcC
Confidence 3444444433222356999999999888775433221 1112222554444555566 788999999887733322111
Q ss_pred cceeE-----E--EEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeC
Q psy9769 398 RSTLG-----V--AVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENL 462 (1026)
Q Consensus 398 r~~~~-----~--~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 462 (1026)
-...+ . ..-+|++|+.+..+ ..+..|+. ++... .+.... .+.+..++++++.++
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~-----g~~~l~~~--g~~~~---~~~~~v-~~~~~sdg~~l~~~s 300 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARRE-----GRSAVFID--GERVE---APQGNH-GRVVLWRGKLVTSHT 300 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEET-----TEEEEEET--TEEEC---CCSSEE-EEEEEETTEEEEEEE
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcC-----CcEEEEEE--CCeec---cCCCce-EEEEecCCEEEEEEc
Confidence 11110 0 22367787777654 35777777 54443 222211 122222888777654
No 402
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=41.60 E-value=2.3e+02 Score=32.56 Aligned_cols=147 Identities=13% Similarity=0.019 Sum_probs=79.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-----CC-EEEEEeccCCCeEEEeCCCCeEEe-C
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-----HE-KVYAVGGFNGSLRVYDPSTNEWSS-A 391 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~yd~~~~~W~~-~ 391 (1026)
++.+|+.+. ...+..||+...+-+.+..++....-..+++. +| .+|+..-..+++.++|..+.+=.. +
T Consensus 208 Gr~lyv~~~-----dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 208 GRYLFVIGR-----DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp SCEEEEEET-----TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcC-----CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 456777653 24799999852222333333332222334444 44 888887777889999987754221 1
Q ss_pred C--CC--------cCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEE
Q psy9769 392 P--PM--------EARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYA 459 (1026)
Q Consensus 392 ~--~~--------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv 459 (1026)
+ .+ |.+|.....+..++..+++-= .....++..|..+.....+..++..+..|....- ++ .+|+
T Consensus 283 ~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~v 358 (567)
T 1qks_A 283 STRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFIT 358 (567)
T ss_dssp ECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEE
T ss_pred eccccccccccccCCCceEEEEEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEE
Confidence 1 11 233433322223333343321 1236788899887766555555566666655443 33 4555
Q ss_pred Ee-CCCceeeEEcCcc
Q psy9769 460 EN-LDGRILGCVKEIT 474 (1026)
Q Consensus 460 ~G-G~~~~~~~~~~~~ 474 (1026)
.. +.+.+..+|..+.
T Consensus 359 a~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 359 AANARNKLVVIDTKEG 374 (567)
T ss_dssp EEGGGTEEEEEETTTT
T ss_pred EeCCCCeEEEEECCCC
Confidence 44 4566667776654
No 403
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=40.68 E-value=15 Score=38.91 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=31.0
Q ss_pred echhhHHHHHHHHHhcCchhHHhHHHHhhhcccC
Q psy9769 130 VTEENVQMLLPAANLLQLTDVRDACCDFLQCQLH 163 (1026)
Q Consensus 130 i~~~~v~~ll~~A~~l~l~~L~~~c~~~l~~~l~ 163 (1026)
++.+|+..++.+|+.++++.|++.|.+||..++.
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998753
No 404
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.43 E-value=2.8e+02 Score=32.64 Aligned_cols=145 Identities=12% Similarity=0.097 Sum_probs=72.4
Q ss_pred CcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCC-------------CeEEEeCCCCeEE--eCCCCcC
Q psy9769 333 IRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNG-------------SLRVYDPSTNEWS--SAPPMEA 396 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~-------------~~~~yd~~~~~W~--~~~~~p~ 396 (1026)
...++.+|..+++......++.... ...+. -+|+.++++..+. .+++++..+..-. .+...+.
T Consensus 146 ~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~ 224 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG 224 (695)
T ss_dssp CCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC
T ss_pred eEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC
Confidence 4689999999987641112222221 22232 2555555554433 3888888876521 2222221
Q ss_pred -CcceeEEE-EECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeC----CCceeeEE
Q psy9769 397 -RRSTLGVA-VLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENL----DGRILGCV 470 (1026)
Q Consensus 397 -~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG----~~~~~~~~ 470 (1026)
+....+.. .-+|+..+++...+. ..+.++.+|..+..|..+..-..... ..+..++.+|+... .+.+..++
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~--~~~~~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAKY--EVHAWKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCCE--EEEEETTEEEEEECTTCTTCEEEEEB
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCceE--EEEecCCcEEEEECCCCCCCEEEEEe
Confidence 12222222 235654444433221 34678888877778887764332222 22235666666653 23445555
Q ss_pred cCcc---cEEEeec
Q psy9769 471 KEIT---DWGLIIE 481 (1026)
Q Consensus 471 ~~~~---~W~~~~~ 481 (1026)
..+. .|..+.+
T Consensus 302 ~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 302 PAKPARASWKEIVP 315 (695)
T ss_dssp TTBCSGGGCEEEEC
T ss_pred CCCCCccCCeEEec
Confidence 4332 2765543
No 405
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=39.42 E-value=3.6e+02 Score=28.30 Aligned_cols=107 Identities=14% Similarity=-0.066 Sum_probs=60.6
Q ss_pred CcEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEE--ECCEE
Q psy9769 333 IRSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAV--LNSLI 410 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i 410 (1026)
...++.+|+.+.+...+...+..........-+|+..+++..+..++++|+.+.+-..+...+.......... -+++.
T Consensus 59 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~ 138 (388)
T 3pe7_A 59 PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTK 138 (388)
T ss_dssp SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCe
Confidence 3479999999998888765443332222333355444555556689999999887655544443332222222 24443
Q ss_pred EEEec---cC--------------CCCCCCEEEEEECCCCcEEEcc
Q psy9769 411 YAVGG---FD--------------GSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 411 yv~GG---~~--------------~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
++.-- .. .......++.+|+.+++-..+.
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 139 LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred eccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 33210 00 0112368999999988766554
No 406
>1c9o_A CSPB, cold-shock protein; beta barrel, homodimer, transcription; 1.17A {Bacillus caldolyticus} SCOP: b.40.4.5 PDB: 2hax_A 1hz9_A 1hzb_A 1i5f_A 1hza_A 1hzc_A 3pf4_A 1csq_A 1nmf_A 1nmg_A 1csp_A 2f52_A 2es2_A 3pf5_A 2i5m_X 2i5l_X
Probab=39.01 E-value=1.2e+02 Score=23.50 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=35.6
Q ss_pred EEEEEEEEec-ce-EEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEE
Q psy9769 953 VWGVLKEKMP-GG-VRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKY 1007 (1026)
Q Consensus 953 v~G~V~~i~~-~G-~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~v 1007 (1026)
.+|+|+...+ .| =|+.-++|=+=++|.++|..... ..+++||.|++.+..=
T Consensus 2 ~~G~Vk~fn~~kGfGFI~~~~g~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~~ 54 (66)
T 1c9o_A 2 QRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGF----KTLEEGQEVSFEIVQG 54 (66)
T ss_dssp EEEEEEEEETTTTEEEEEETTEEEEEEEGGGBCSSSC----CCCCTTCEEEEEEEEE
T ss_pred CceEEEEEECCCCeEEEecCCCccEEEEHHHccccCC----CCCCCCCEEEEEEEEC
Confidence 3689988742 22 46666666788999999954322 3467999999987643
No 407
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=38.64 E-value=96 Score=33.86 Aligned_cols=105 Identities=14% Similarity=0.167 Sum_probs=55.8
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcE-----EEcCCCCcc--c-------cceeeEEE--CCEEEEEeccCCCeEEEeCC
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERW-----QSVAEMPTR--R-------CRAGLVFL--HEKVYAVGGFNGSLRVYDPS 384 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~iyv~GG~~~~~~~yd~~ 384 (1026)
.+++.|+.+ ..+..||..+... ..+.....+ + .....+.+ ++.+++.|+. +.+.+||..
T Consensus 240 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 240 NTFVYSSSK----GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp TEEEEEETT----SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred cEEEEEeCC----CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 566677654 3688899887653 222211110 0 01122222 4666677777 999999997
Q ss_pred C-CeEEeCCCCc---CCcc-------------eeEEE-EECCEEEEEeccCCCCCCCEEEEEECCCCcEEE
Q psy9769 385 T-NEWSSAPPME---ARRS-------------TLGVA-VLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM 437 (1026)
Q Consensus 385 ~-~~W~~~~~~p---~~r~-------------~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 437 (1026)
+ .+. +..+. ..+. ...++ .-+++.++.|+.+ ..+..||..+++-..
T Consensus 315 ~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----g~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 315 MENRP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----NFFRMFDRNTKRDIT 378 (447)
T ss_dssp CCSSC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----TEEEEEETTTCCEEE
T ss_pred CCccc--cceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----CEEEEEEcCCCccee
Confidence 6 321 11111 0000 01122 2356666777765 578899998877654
No 408
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=37.84 E-value=1.8e+02 Score=30.86 Aligned_cols=107 Identities=12% Similarity=0.015 Sum_probs=56.7
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEecc------CCCeEEEeCCCCeEEeCCCCcCCcceeE-EEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGF------NGSLRVYDPSTNEWSSAPPMEARRSTLG-VAV 405 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~------~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~ 405 (1026)
..++.+|+.+.+-..+..-+. ...+....- +|+..++... ...++.+|..+.....+...+....... ...
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 578899998887666543221 122222333 4443333221 2378899988777666654332111111 222
Q ss_pred ECCE-EEEEeccCCCCCCCEEEEEECCCCcEEEccCCC
Q psy9769 406 LNSL-IYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS 442 (1026)
Q Consensus 406 ~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 442 (1026)
-+|+ |+......+ .....++.||+.+++-+.+..++
T Consensus 247 pdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 247 PDGSALVYVSYLKG-SPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp TTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEEEEC
T ss_pred CCCCEEEEEecCCC-CCcceEEEEecCCCceEEEEcCC
Confidence 2555 544433222 11235999999998877665443
No 409
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=37.69 E-value=63 Score=26.19 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=40.3
Q ss_pred CcEEEEEEEEEecce-EEEEeCCCceeeEeccccCc-ccccCcccccccCCEEEEEEEEEeCCeeeec
Q psy9769 950 GRLVWGVLKEKMPGG-VRVEFDGDISGVFPTSAMSQ-ATRTLVYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G-~fV~~~~~i~Gl~~~~~ls~-~~~~~~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
--.+.|.|++..+.| ..|++++|..=+++.+=--. .++ ...+||.|.+.+...|..+..++
T Consensus 13 ~ie~~G~Vik~l~n~~f~V~l~nG~~~~c~i~GK~Rk~~I-----~Il~GD~V~ve~~~yd~~kgrIi 75 (79)
T 3i4o_A 13 AIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYI-----RILPEDRVVVELSPYDLSRGRIV 75 (79)
T ss_dssp CSEEEEEEEEEETTTEEEEEETTSCEEEEEECHHHHHTTC-----CCCTTCEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEEEEEcCCCEEEEEeCCCCEEEEEeCcceecCCc-----cCCCCCEEEEEECccCCCcEEEE
Confidence 346789999999666 56999988665666542211 111 25799999987766665555543
No 410
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=37.44 E-value=77 Score=35.12 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=68.1
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--C-CEEEEEeccCC----CeEEEeCCCCeEE---
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--H-EKVYAVGGFNG----SLRVYDPSTNEWS--- 389 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~----~~~~yd~~~~~W~--- 389 (1026)
+.||+.--. ..+.++|+.++.+..+.+ +. .......+ + +.||+....++ .+..++.. ..|.
T Consensus 150 g~Lyv~d~~-----~~I~~id~~~~~v~~~~~-~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~ 220 (430)
T 3tc9_A 150 NHLYLVGEQ-----HPTRLIDFEKEYVSTVYS-GL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVIT 220 (430)
T ss_dssp EEEEEEEBT-----EEEEEEETTTTEEEEEEC-CC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEE
T ss_pred CeEEEEeCC-----CcEEEEECCCCEEEEEec-CC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeee
Confidence 567776421 688999999988877654 11 12222222 3 45999865333 24445543 2332
Q ss_pred eCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC-EEEEEeC
Q psy9769 390 SAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG-CLYAENL 462 (1026)
Q Consensus 390 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG 462 (1026)
.++.+..| +++++. ++.||+.--. ...+++||+.+.....+...+......+++.. ++ .||+.--
T Consensus 221 ~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 221 ELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 23323332 333443 6789987432 25899999987765444333322112233333 34 5898864
No 411
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.41 E-value=43 Score=25.33 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=30.4
Q ss_pred CcEEEEEEEEEecc--eEEEEeCCCceeeEeccccCc
Q psy9769 950 GRLVWGVLKEKMPG--GVRVEFDGDISGVFPTSAMSQ 984 (1026)
Q Consensus 950 G~~v~G~V~~i~~~--G~fV~~~~~i~Gl~~~~~ls~ 984 (1026)
|.-+-|+|++|... -|+|.|+++-+-.+..++|..
T Consensus 21 GlfYlgtV~kV~~~~~~ClV~FeD~s~~wv~~kdi~~ 57 (63)
T 2e5q_A 21 GLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWKDIQH 57 (63)
T ss_dssp SCEEEEEECCCCSTTSEEEEEETTSCEEEEEGGGEEC
T ss_pred CCEEEEEEEEEecCCCEEEEEEccCceeEEEeecccc
Confidence 88899999999744 499999999999999998854
No 412
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=37.31 E-value=17 Score=33.19 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=31.2
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELHFA 195 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~~~ 195 (1026)
++.+|+..++..|+.+++..|.+.|.+|+..++.
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 6778999999999999999999999999988764
No 413
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=37.30 E-value=3.6e+02 Score=30.88 Aligned_cols=156 Identities=14% Similarity=0.030 Sum_probs=83.8
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEE-cC--CC--------CccccceeeEEEC-CEEEEEeccCCCeEEEeCCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQS-VA--EM--------PTRRCRAGLVFLH-EKVYAVGGFNGSLRVYDPSTN 386 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~-~~--~~--------p~~r~~~~~~~~~-~~iyv~GG~~~~~~~yd~~~~ 386 (1026)
++.+|+..- ..+.+..+|..+.+=.. ++ .+ |.+|.....+..+ ...++.-...+.+++.|..+.
T Consensus 255 Gk~l~v~n~----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 255 DKYAIAGAY----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp TTEEEEEEE----ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS
T ss_pred CCEEEEEEc----cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCC
Confidence 345666542 23567788876654322 11 11 1223332222233 344444455678888888776
Q ss_pred eEEeCCCCcCCcceeEEEEE-CCE-EEEEeccCCCCCCCEEEEEECCCCcEE---Ec-cCCCCCcceeEEEEE--CCEEE
Q psy9769 387 EWSSAPPMEARRSTLGVAVL-NSL-IYAVGGFDGSSGLNSAEVYDPSTEKWN---MI-APMSTRRSSVGVGVL--NGCLY 458 (1026)
Q Consensus 387 ~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~---~~-~~~p~~r~~~~~~~~--~~~ly 458 (1026)
....+..++..+.-|....- +++ +|+.... .+.+.++|..+++=. .+ ...|.|..+... .. ++.+|
T Consensus 331 ~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~ 404 (567)
T 1qks_A 331 NNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVW 404 (567)
T ss_dssp SEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEE
T ss_pred ccceeeeeeccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEE
Confidence 55555455556665655443 444 4554322 368999999988643 22 344555434332 33 36788
Q ss_pred EEe--CCCceeeEEcCc-----ccEEEeecCCC
Q psy9769 459 AEN--LDGRILGCVKEI-----TDWGLIIELPN 484 (1026)
Q Consensus 459 v~G--G~~~~~~~~~~~-----~~W~~~~~lP~ 484 (1026)
+.+ |.+.+..++... ..|..+..++.
T Consensus 405 ~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred EeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 776 555666666543 23877766553
No 414
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=36.54 E-value=5.3e+02 Score=30.41 Aligned_cols=145 Identities=10% Similarity=0.069 Sum_probs=72.7
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEecc-------------CCCeEEEeCCCCeE--EeCCCCc-C
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGF-------------NGSLRVYDPSTNEW--SSAPPME-A 396 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~-------------~~~~~~yd~~~~~W--~~~~~~p-~ 396 (1026)
..++.+|..++++.... .+.... ...+.. +..||..... ...+++++..+..- ..+...+ .
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKWVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEEEES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCcc-CCCcee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 57999999998876531 111111 122222 3344443211 12367777766542 1111111 1
Q ss_pred CcceeEEE-EECCEEEEEeccCCCCCCCEEEEEECCCC--c-EEEccCCCCCcceeEEEEECCEEEEEeC----CCceee
Q psy9769 397 RRSTLGVA-VLNSLIYAVGGFDGSSGLNSAEVYDPSTE--K-WNMIAPMSTRRSSVGVGVLNGCLYAENL----DGRILG 468 (1026)
Q Consensus 397 ~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG----~~~~~~ 468 (1026)
+....+.. .-+|+..++....+....+.++.+|+.+. . |..+..-....... +..-++.||+... ...+..
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEE
Confidence 22222222 23565444443333223578999999877 6 88776433333222 2345778888754 234556
Q ss_pred EEcCc--ccEEEeec
Q psy9769 469 CVKEI--TDWGLIIE 481 (1026)
Q Consensus 469 ~~~~~--~~W~~~~~ 481 (1026)
++..+ ..|..+.+
T Consensus 346 ~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 346 VDLSGSTPRFDTVVP 360 (741)
T ss_dssp EECSSSSCEEEEEEC
T ss_pred EeCCCCccccEEEec
Confidence 66555 36776653
No 415
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=36.31 E-value=4.2e+02 Score=28.21 Aligned_cols=143 Identities=19% Similarity=0.265 Sum_probs=75.6
Q ss_pred CcEEEEE--ECCCCcEEEcCCC--C--cc-ccceeeEEE----CCEEEEE-eccCCCeEEEeC---CCCeE--EeCCCCc
Q psy9769 333 IRSVECY--DFKTERWQSVAEM--P--TR-RCRAGLVFL----HEKVYAV-GGFNGSLRVYDP---STNEW--SSAPPME 395 (1026)
Q Consensus 333 ~~~~~~y--d~~~~~W~~~~~~--p--~~-r~~~~~~~~----~~~iyv~-GG~~~~~~~yd~---~~~~W--~~~~~~p 395 (1026)
.+.+..| ||.++.|..+... | .. +.-+++|.+ .+++|+| .+.++.++.|+. ...+. +.+..++
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 4566666 8889999998654 4 33 555566664 3554444 233467777665 33323 2233333
Q ss_pred CCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEE--CCC-CcEEEccCCCCC---cceeEEEEE-C----CEEEEEe-
Q psy9769 396 ARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYD--PST-EKWNMIAPMSTR---RSSVGVGVL-N----GCLYAEN- 461 (1026)
Q Consensus 396 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd--~~~-~~W~~~~~~p~~---r~~~~~~~~-~----~~lyv~G- 461 (1026)
.+-.-.+|++- .++||+-- . . ..+|+|| |.+ .+-+.+...+.+ ..-.+++.+ . +.|++..
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~e--E---d-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAE--E---D-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEE--T---T-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred CCCCcceEEEcCCCCeEEEec--c---c-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 33333344554 47898841 1 1 4599999 443 124444332222 234566655 2 3577776
Q ss_pred CCCceeeEEcCcccEEEeecC
Q psy9769 462 LDGRILGCVKEITDWGLIIEL 482 (1026)
Q Consensus 462 G~~~~~~~~~~~~~W~~~~~l 482 (1026)
|.+....|+.. .+|..++.+
T Consensus 252 G~~s~~Vydr~-~~~~~vg~f 271 (355)
T 3amr_A 252 GNSSYAIYDRQ-GKNKYVADF 271 (355)
T ss_dssp GGTEEEEEESS-TTCCEEEEE
T ss_pred CCCEEEEEECC-CCCcEEEEE
Confidence 55555555443 345455443
No 416
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=36.13 E-value=72 Score=33.07 Aligned_cols=115 Identities=14% Similarity=0.150 Sum_probs=61.1
Q ss_pred CcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEecc-----CCCeEEEeCCCCeEEe---CCCCcCCcceeE
Q psy9769 333 IRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGF-----NGSLRVYDPSTNEWSS---APPMEARRSTLG 402 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~-----~~~~~~yd~~~~~W~~---~~~~p~~r~~~~ 402 (1026)
...+++||+.+.++..+..+ . ...+.+.. ++ .||+.... .+.+++||...+.... ....+.... .+
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p-dg 243 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADL--D-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP-DG 243 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEE--S-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC-CS
T ss_pred CCeEEEEcCCCCcEEEEecC--C-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC-Ce
Confidence 35799999988887765411 1 11223333 33 68887554 2578889877554221 111111111 12
Q ss_pred EEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE---CCEEEEEeC
Q psy9769 403 VAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL---NGCLYAENL 462 (1026)
Q Consensus 403 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG 462 (1026)
++. -+|.||+..+ ..+.+||+.......+. +|.. ...+.+ ++.||+...
T Consensus 244 i~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~-~~~~---~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 244 FCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP-TPGT---ASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEECTTSCEEECCS-------SEEEEECTTSCEEEEEE-CSSC---CCEEEECTTSCEEEEEET
T ss_pred EEECCCCCEEEecC-------CcEEEECCCCCEEEEEE-CCCc---eeEEEEeCCCCEEEEEcC
Confidence 222 3677887642 35999999765554443 3332 222223 346777654
No 417
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=35.78 E-value=5e+02 Score=30.32 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=65.4
Q ss_pred CcEEEEEECCCCcE--EEcCCCCcc-ccceeeE-EECCEEEEEeccCC----CeEEEeCCCCeEEeCCCCcCCcceeEEE
Q psy9769 333 IRSVECYDFKTERW--QSVAEMPTR-RCRAGLV-FLHEKVYAVGGFNG----SLRVYDPSTNEWSSAPPMEARRSTLGVA 404 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W--~~~~~~p~~-r~~~~~~-~~~~~iyv~GG~~~----~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 404 (1026)
...++.++..+..- ..+...+.. ....+.. .-+|+..+++...+ .++.+|..+..|..+.+-.... ...+
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~ 278 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK--YEVH 278 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC--EEEE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce--EEEE
Confidence 45688888877652 222222221 2222222 22444334433322 6777777777787765322222 2222
Q ss_pred EECCEEEEEeccCCCCCCCEEEEEECCCCc---EEEccCCCCCcceeEEEEECCEEEEEeC
Q psy9769 405 VLNSLIYAVGGFDGSSGLNSAEVYDPSTEK---WNMIAPMSTRRSSVGVGVLNGCLYAENL 462 (1026)
Q Consensus 405 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~~~~lyv~GG 462 (1026)
..+|.+|+....+ .....++.+|+.+.. |+.+.+-.....-...+..++++++...
T Consensus 279 ~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 279 AWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYL 337 (695)
T ss_dssp EETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEE
T ss_pred ecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEE
Confidence 3566766554322 224689999987765 8776542212222233444888888764
No 418
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=35.72 E-value=3e+02 Score=26.39 Aligned_cols=136 Identities=10% Similarity=0.038 Sum_probs=72.5
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCC--CcEEE--c----CCCCccccceeeEE-E--CCEEEEEeccCCCeEEEeCCCCe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKT--ERWQS--V----AEMPTRRCRAGLVF-L--HEKVYAVGGFNGSLRVYDPSTNE 387 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~--~~W~~--~----~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~yd~~~~~ 387 (1026)
.+.+|++=| +.+|+++... ..... + +.+|. ..-+|. . ++++|+|-| +..|+|+..+-.
T Consensus 16 ~g~~yfFkg------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~---~IDAa~~~~~~~~~yfFkG--~~yw~~~~~~~~ 84 (195)
T 1itv_A 16 GNQLYLFKD------GKYWRFSEGRGSRPQGPFLIADKWPALPR---KLDSVFEEPLSKKLFFFSG--RQVWVYTGASVL 84 (195)
T ss_dssp TTEEEEEET------TEEEEECCSSSCCCEEEEEHHHHCTTSCS---SCSEEEECTTTCCEEEEET--TEEEEEETTEEE
T ss_pred CCEEEEEEC------CEEEEEECCccccCCCcEEhhhccCCCCC---CccEEEEECCCCeEEEEeC--CEEEEEcCCccC
Confidence 567788876 3677787655 22322 1 33443 222333 2 688999976 347778754211
Q ss_pred E-EeCC--CCcCC--cceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEE-----Ecc-CCC-CCcceeEEEEECC
Q psy9769 388 W-SSAP--PMEAR--RSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN-----MIA-PMS-TRRSSVGVGVLNG 455 (1026)
Q Consensus 388 W-~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~p-~~r~~~~~~~~~~ 455 (1026)
- +.+. .+|.. .-.++....++++|+|-| +..++||..+++=. .+. ..+ .|..-.++...++
T Consensus 85 ~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g 157 (195)
T 1itv_A 85 GPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFRE 157 (195)
T ss_dssp EEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEEETT
T ss_pred CCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCCCCCCEEEEeCC
Confidence 1 0111 12321 222233323789999977 57899998765421 111 111 1222335555689
Q ss_pred EEEEEeCCCceeeEEcCc
Q psy9769 456 CLYAENLDGRILGCVKEI 473 (1026)
Q Consensus 456 ~lyv~GG~~~~~~~~~~~ 473 (1026)
.+|.+-|. ..+.|+...
T Consensus 158 ~~Yffkg~-~y~~~~~~~ 174 (195)
T 1itv_A 158 KAYFCQDR-FYWRVSSRS 174 (195)
T ss_dssp EEEEEETT-EEEEEECCT
T ss_pred eEEEEeCC-EEEEEECCc
Confidence 99999874 344455543
No 419
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=35.51 E-value=3.1e+02 Score=26.37 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcE-EEcCC--CCccccceeeEE--ECCEEEEEeccCCCeEEEeCCCCeEEe---
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERW-QSVAE--MPTRRCRAGLVF--LHEKVYAVGGFNGSLRVYDPSTNEWSS--- 390 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W-~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~yd~~~~~W~~--- 390 (1026)
++.+|++-| +..|.|+..+..- +.+.. +|......-+|. .++++|+|-| +..++||..+++=..
T Consensus 64 ~~~~yfFkG------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyP 135 (195)
T 1itv_A 64 SKKLFFFSG------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSA 135 (195)
T ss_dssp TCCEEEEET------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGC
T ss_pred CCeEEEEeC------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCc
Confidence 467888877 4678887542111 01211 222111222333 3689999965 467899987764221
Q ss_pred --C----CCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 391 --A----PPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 391 --~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+ +.+|. .-.++...+|.+|.+-| +..++||..+..
T Consensus 136 r~i~~~w~Gvp~--~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 136 SEVDRMFPGVPL--DTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp EEHHHHSTTSCS--SCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred cChhhcCCCCCC--CCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 1 12222 23345566899999988 578888886654
No 420
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=35.46 E-value=99 Score=32.36 Aligned_cols=98 Identities=12% Similarity=0.051 Sum_probs=54.6
Q ss_pred CcEEEEEECCCCcEEEcCCCCccccceeeEEE-CC-EEEEEecc--------------------------CCCeEEEeCC
Q psy9769 333 IRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HE-KVYAVGGF--------------------------NGSLRVYDPS 384 (1026)
Q Consensus 333 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~--------------------------~~~~~~yd~~ 384 (1026)
...++.+|..+.+...+...+. ....+.. +| .|+..... ...++++|+.
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred cceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 4568999998888776654433 1222222 44 44444311 1357889998
Q ss_pred CCeE-EeCCCCcCCcceeEEEEE-CCEEEEEeccCCCC---C-CCEEEEEECCCCcEEEccC
Q psy9769 385 TNEW-SSAPPMEARRSTLGVAVL-NSLIYAVGGFDGSS---G-LNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 385 ~~~W-~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---~-~~~v~~yd~~~~~W~~~~~ 440 (1026)
+++. ..+.. + . ....+.. +| +++.+..+... . ...++.+| ++++..+..
T Consensus 161 ~~~~~~~l~~-~--~-~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 161 SEEVIEEFEK-P--R-FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp TTEEEEEEEE-E--T-TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred CCeEEeeecC-C--C-cccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 8877 55544 3 2 2223333 45 55555433221 2 45788888 777776653
No 421
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=35.20 E-value=2.9e+02 Score=27.23 Aligned_cols=114 Identities=11% Similarity=0.144 Sum_probs=60.1
Q ss_pred ECCEEEEEeccCCCeEEEeCCCCeEE--eC----CCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEE
Q psy9769 364 LHEKVYAVGGFNGSLRVYDPSTNEWS--SA----PPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM 437 (1026)
Q Consensus 364 ~~~~iyv~GG~~~~~~~yd~~~~~W~--~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 437 (1026)
.+|.+|+|=| ...|+++.....+. .+ +.+|.. -. |+...++++|+|-| +.+|+|+..++ .+.
T Consensus 27 ~~g~~yfFkg--~~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG-------~~yw~~~~~~~-~~~ 94 (219)
T 1hxn_A 27 NHGATYVFSG--SHYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD-------TKVYVFLTKGG-YTL 94 (219)
T ss_dssp TTSCEEEEET--TEEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET-------TEEEEEECSSS-CEE
T ss_pred CCCcEEEEeC--CEEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC-------CEEEEEeCCCC-cee
Confidence 4789999955 34666664432211 11 133321 22 33445999999977 67899986532 122
Q ss_pred cc----------CCCCC--cceeEEEE-E--CCEEEEEeCCCceeeEEcCc---ccEEEeecCCCcccceE
Q psy9769 438 IA----------PMSTR--RSSVGVGV-L--NGCLYAENLDGRILGCVKEI---TDWGLIIELPNFLSASV 490 (1026)
Q Consensus 438 ~~----------~~p~~--r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~---~~W~~~~~lP~~~~g~~ 490 (1026)
.+ .+|.. ....-+|. . ++++|+|-|. ..+.||..+ ..|...+-.|..+.+..
T Consensus 95 ~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~-~ywr~d~~~~P~~i~~~~~g~p~~vdAa~ 164 (219)
T 1hxn_A 95 VNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR-RLWWLDLKSGAQATWTELPWPHEKVDGAL 164 (219)
T ss_dssp CTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT-EEEEEEGGGGGGCCCEEECCSCSCCSEEE
T ss_pred cCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC-EEEEEeCCCCceEhhhcCCCCCCCcCEEE
Confidence 21 23322 11122333 2 5899999885 446676533 34554444455444333
No 422
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=34.89 E-value=35 Score=30.33 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=29.0
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELH 193 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 193 (1026)
++.+|+..++..|+.+++..|.+.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 56789999999999999999999999998754
No 423
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=34.83 E-value=1.8e+02 Score=34.54 Aligned_cols=107 Identities=8% Similarity=-0.036 Sum_probs=54.0
Q ss_pred CCcEEEEEECCCCcEEEcCCCCccc----cceeeEEECCEEEEEeccCC--CeEEEeCCCCeEEeCCCCcCCcceeEEEE
Q psy9769 332 AIRSVECYDFKTERWQSVAEMPTRR----CRAGLVFLHEKVYAVGGFNG--SLRVYDPSTNEWSSAPPMEARRSTLGVAV 405 (1026)
Q Consensus 332 ~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~--~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 405 (1026)
....++.+|+.+.+...+....... ....+..-+|++++.++.++ .++.+|.... +..+..-...........
T Consensus 310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s 388 (741)
T 2ecf_A 310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVD 388 (741)
T ss_dssp SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEE
T ss_pred CeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEe
Confidence 3467899999988877653322111 11222223667777777666 4666776655 666554221111111122
Q ss_pred ECC-EEEEEeccCCCCCCCEEEEEECCCCcEEEccC
Q psy9769 406 LNS-LIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 406 ~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
-++ .||+.+..+ ......+|..+.....-..+..
T Consensus 389 ~dg~~l~~~~~~~-~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 389 EKAGLAYFRAGIE-SARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp TTTTEEEEEECSS-CTTCBEEEEEETTCCCCEECCC
T ss_pred CCCCEEEEEEeCC-CCceEEEEEEEcCCCCeeeccc
Confidence 244 566655432 2223557777665443444443
No 424
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=34.59 E-value=23 Score=37.99 Aligned_cols=110 Identities=8% Similarity=0.079 Sum_probs=58.6
Q ss_pred EEEEeccCCCeEEEeCCCCe--EEeCCC----CcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCC
Q psy9769 368 VYAVGGFNGSLRVYDPSTNE--WSSAPP----MEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPM 441 (1026)
Q Consensus 368 iyv~GG~~~~~~~yd~~~~~--W~~~~~----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 441 (1026)
+.++|..++.++.+|..+++ |+.-.. +-..+... ...++.+|++.... ...++.||+.++.|..--.+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~--~~~~~~~~vv~p~~----dG~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS--RLETYETLIIEPFG----DGNIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSC--TTTSSEEEEECCST----TTEEEEEETTTEEEEEEEEH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCc--cccCCcEEEEEECC----CCEEEEEECCCCcEEeeecc
Confidence 44557788999999988765 975332 11111110 11255677664321 14688899887776532222
Q ss_pred C-----CC-cceeEEEE-------ECCEEEEEeCCCceeeEEcCccc--EEEeecCC
Q psy9769 442 S-----TR-RSSVGVGV-------LNGCLYAENLDGRILGCVKEITD--WGLIIELP 483 (1026)
Q Consensus 442 p-----~~-r~~~~~~~-------~~~~lyv~GG~~~~~~~~~~~~~--W~~~~~lP 483 (1026)
| .| +....-++ .++.+|+-+..+.+...|..+.+ |..-...|
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~ 142 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSK 142 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCB
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCC
Confidence 2 11 11111122 46666666556667777776644 77654433
No 425
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=34.58 E-value=1.2e+02 Score=23.99 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=36.1
Q ss_pred EEEEEEEEec-ce-EEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEe
Q psy9769 953 VWGVLKEKMP-GG-VRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYE 1008 (1026)
Q Consensus 953 v~G~V~~i~~-~G-~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd 1008 (1026)
.+|+|+...+ .| =||.-++|=+=|+|.++|..... ..+.+||.|++.+..-+
T Consensus 2 ~~G~Vk~fn~~kGfGFI~~~~g~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~~~ 55 (73)
T 3a0j_A 2 QKGRVKWFNAEKGYGFIEREGDTDVFVHYTAINAKGF----RTLNEGDIVTFDVEPGR 55 (73)
T ss_dssp EEEEEEEEETTTTEEEEECTTSCCEEEEGGGBCSSSC----SSCCTTCEEEEEEECCS
T ss_pred CCEEEEEEECCCCEEEEecCCCCcEEEEhhhccccCC----CCCCCCCEEEEEEEECC
Confidence 3689987742 22 46666667788999999954322 34689999999876433
No 426
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=34.56 E-value=2.4e+02 Score=31.34 Aligned_cols=141 Identities=10% Similarity=-0.097 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEc------CCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCCe-----
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSV------AEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNE----- 387 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~------~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~----- 387 (1026)
.+.+|+|-| +..|+++.....+... +.+|..-...-....++++|+| .++..|+|+..+-.
T Consensus 272 ~ge~y~Fkg------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~iDAa~~~~~~g~~~fF--Kg~~~W~~~~~~~~~gyP~ 343 (450)
T 1su3_A 272 RGEVMFFKD------RFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFF--KGNKYWAVQGQNVLHGYPK 343 (450)
T ss_dssp TTEEEEEET------TEEEECCTTSSSCEEEEGGGTCTTSCSSCCEEEEEGGGTEEEEE--ETTEEEEEETTEECTTCSE
T ss_pred CCeEEEEeC------CEEEEEcCCCCcccceehhHhccCCCCCeeEEEEEcCCCeEEEE--eCCEEEEecCCcccCCCce
Q ss_pred ----EEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC-------CCcceeEEEEECCE
Q psy9769 388 ----WSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS-------TRRSSVGVGVLNGC 456 (1026)
Q Consensus 388 ----W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-------~~r~~~~~~~~~~~ 456 (1026)
..-+|.+|..--.+-....++++|+|-| +..|+||..+++-..--+-+ .|..--++...+++
T Consensus 344 ~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~ 416 (450)
T 1su3_A 344 DIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGF 416 (450)
T ss_dssp EHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTE
T ss_pred eeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCe
Q ss_pred EEEEeCCCceeeEEcCccc
Q psy9769 457 LYAENLDGRILGCVKEITD 475 (1026)
Q Consensus 457 lyv~GG~~~~~~~~~~~~~ 475 (1026)
+|.|-| ...+.|+..+.+
T Consensus 417 ~YFFkg-~~ywr~d~~~~~ 434 (450)
T 1su3_A 417 FYFFHG-TRQYKFDPKTKR 434 (450)
T ss_dssp EEEEET-TEEEEEETTTTE
T ss_pred EEEEeC-CEEEEEECCcce
No 427
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=34.50 E-value=2.1e+02 Score=31.46 Aligned_cols=111 Identities=14% Similarity=-0.061 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEe---------ccCCCeEEEeCCCC
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVG---------GFNGSLRVYDPSTN 386 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G---------G~~~~~~~yd~~~~ 386 (1026)
.++.+||.-.......+.+..+|+.+++ .+..+|.+... .+++- +..+|+.- +.++.+.++|+.+.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~--vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGR--ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTE--EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCE--EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 3467888865321112789999998865 33444444333 33332 35788874 23457999999988
Q ss_pred eEEe---CCCCcC---CcceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 387 EWSS---APPMEA---RRSTLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 387 ~W~~---~~~~p~---~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
+-.. ++..+. ...-+.++. -+..+|+..-. ..+.+.++|+.+++=
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 6432 220000 011122222 24578887321 136899999887664
No 428
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=34.29 E-value=63 Score=25.07 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=30.5
Q ss_pred CcEEEEEEEEEecceEEEEeCCCceeeEeccccC
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMS 983 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls 983 (1026)
|.-+-|+|+.....-++|.|+++-+=.+..++|.
T Consensus 29 G~fYLGtIVd~~~~~ClV~FeD~S~~Wv~~kdi~ 62 (69)
T 2xk0_A 29 GRFYLGTIIDQTSDQYLIRFDDQSEQWCEPDKLR 62 (69)
T ss_dssp SCEEEEEEEEECSSCEEEEETTCCEEEECTTTEE
T ss_pred CCEEEEEEEecCCceEEEEecCCcceeeeHHHHH
Confidence 8889999999999999999999988888887774
No 429
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=34.11 E-value=33 Score=30.14 Aligned_cols=32 Identities=9% Similarity=-0.026 Sum_probs=27.3
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELH 193 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 193 (1026)
++.+|+..++..|+.+++..|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 56789999999999999999999999998765
No 430
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=33.56 E-value=65 Score=34.46 Aligned_cols=100 Identities=7% Similarity=-0.002 Sum_probs=53.6
Q ss_pred cEEEEEECCCC--cEEEcCC--CC--ccccceeeEEECCEEEEEe-ccCCCeEEEeCCCCeEEeCCCCcC-----Cccee
Q psy9769 334 RSVECYDFKTE--RWQSVAE--MP--TRRCRAGLVFLHEKVYAVG-GFNGSLRVYDPSTNEWSSAPPMEA-----RRSTL 401 (1026)
Q Consensus 334 ~~~~~yd~~~~--~W~~~~~--~p--~~r~~~~~~~~~~~iyv~G-G~~~~~~~yd~~~~~W~~~~~~p~-----~r~~~ 401 (1026)
..++++|..+. .|+.-.+ .| ..+... ...++.+|++. ..++.++.||..++.|..--.+|. |....
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~--~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~ 97 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS--RLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLK 97 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCSC--TTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEE
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCCc--cccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccC
Confidence 36889998765 5886433 11 111111 11356788776 468899999998877643111111 11111
Q ss_pred EEEEE-------CCEEEEEeccCCCCCCCEEEEEECCCCc--EEEccC
Q psy9769 402 GVAVL-------NSLIYAVGGFDGSSGLNSAEVYDPSTEK--WNMIAP 440 (1026)
Q Consensus 402 ~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~ 440 (1026)
+.-++ .+...++|+.+ ..++.+|..+++ |+.-..
T Consensus 98 ~~pvv~~~~~~~~~g~Vy~Gs~~-----g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 98 TNIVVNDSGKIVEDEKVYTGSMR-----TIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp CC----------CCEEEEECEEE-----EEEEEEETTTCCEEEEESTT
T ss_pred CCceeecccccccCCEEEEEecC-----CEEEEEECCCCcEEEEEecC
Confidence 11122 33444455544 468888888776 776443
No 431
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=33.21 E-value=2.1e+02 Score=33.86 Aligned_cols=62 Identities=8% Similarity=-0.109 Sum_probs=33.1
Q ss_pred CeEEEeCCC-CeEEeCCCC-cCCcc-eeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 377 SLRVYDPST-NEWSSAPPM-EARRS-TLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 377 ~~~~yd~~~-~~W~~~~~~-p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
.++++|..+ .+-..+... +.... ...+. -+|+..+++..+.......++.+|+.+++...+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 567788877 664443321 11111 12223 4454444443322233468999999998876553
No 432
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=33.06 E-value=4.9e+02 Score=28.01 Aligned_cols=115 Identities=18% Similarity=0.178 Sum_probs=68.3
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCC----eEEe-CC-CCcCCcceeEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTN----EWSS-AP-PMEARRSTLGVAV 405 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~----~W~~-~~-~~p~~r~~~~~~~ 405 (1026)
..+..+|+....+..+.+ ..+.-.++++. ++.||+.--..+.++++++... .... +. .+.. -.+.++
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~---p~glav 166 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA---PDGLAV 166 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC---EEEEEE
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC---cccEEE
Confidence 578888988887776532 22233444444 6899999777778999988652 1222 22 2221 223444
Q ss_pred E--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEE--CCEEEEEe
Q psy9769 406 L--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVL--NGCLYAEN 461 (1026)
Q Consensus 406 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~G 461 (1026)
- ++.||+.-.. ...++++|+....-..+. .+..|+ ++++- ++.||+.-
T Consensus 167 D~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td 220 (400)
T 3p5b_L 167 DWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 220 (400)
T ss_dssp ETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEE
T ss_pred EecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEe
Confidence 3 7899998543 258999999877665543 233332 33443 67888874
No 433
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=32.79 E-value=2.2e+02 Score=30.97 Aligned_cols=110 Identities=11% Similarity=-0.034 Sum_probs=62.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEec---------cCCCeEEEeCCCCe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGG---------FNGSLRVYDPSTNE 387 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG---------~~~~~~~yd~~~~~ 387 (1026)
++.+||.-.......+.+..+|+.+++-. ...|.....+ +++. +..+|+... .++.+.+||+.+.+
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 56789886432222468999999887533 3334333334 3333 347998752 34568999999987
Q ss_pred EEeCCCCcC-Cc-----ceeEEEE-E-CCEEEEEeccCCCCCCCEEEEEECCCCcE
Q psy9769 388 WSSAPPMEA-RR-----STLGVAV-L-NSLIYAVGGFDGSSGLNSAEVYDPSTEKW 435 (1026)
Q Consensus 388 W~~~~~~p~-~r-----~~~~~~~-~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 435 (1026)
-..-=+.+. .| .-+..+. - +..+|+.... ..+.+.++|+.+++=
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcE
Confidence 432111111 11 1122222 2 4568886421 126899999887754
No 434
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=32.75 E-value=41 Score=31.47 Aligned_cols=93 Identities=9% Similarity=0.076 Sum_probs=62.8
Q ss_pred HHHHHHhhhe-ec-----ceeee---chhhHHHHHHHHHhcC---------------chhHHhHHHHhhhcccCCcchhh
Q psy9769 114 NALKLLIDYV-YS-----CEIYV---TEENVQMLLPAANLLQ---------------LTDVRDACCDFLQCQLHPTNCLG 169 (1026)
Q Consensus 114 ~~f~~~l~~~-Yt-----g~~~i---~~~~v~~ll~~A~~l~---------------l~~L~~~c~~~l~~~l~~~n~~~ 169 (1026)
..|+.++.-+ +. +.+++ +...+..++..+.+.. -..+.+...+|+. ++.+++++
T Consensus 24 ~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~--id~~~l~e 101 (159)
T 2ast_A 24 VTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLK--VDQGTLFE 101 (159)
T ss_dssp HHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTC--SCHHHHHH
T ss_pred HHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHc--CCHHHHHH
Confidence 4566666542 22 24444 4556677777777665 2334455566674 78899999
Q ss_pred HHHhhhhcCchhHHHHHHhhhhhhhhheecccccccCCHhhHhceecc
Q psy9769 170 IRAFADLHSCLDLLSTAENYIELHFAEIVECEEFLSLSHEQVLGLISS 217 (1026)
Q Consensus 170 ~~~~a~~~~~~~L~~~~~~~i~~~~~~l~~~~~f~~L~~~~l~~ll~~ 217 (1026)
++..|...+...|.+.|.++++..+.. -+++++..++.-
T Consensus 102 Ll~AAnyL~I~~Lld~~c~~va~~i~g---------kt~eeir~~f~I 140 (159)
T 2ast_A 102 LILAANYLDIKGLLDVTCKTVANMIKG---------KTPEEIRKTFNI 140 (159)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSS---------CCHHHHHHHTTC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcC---------CCHHHHHHHcCC
Confidence 999999999999999999999877543 355566665543
No 435
>2ytx_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=32.47 E-value=67 Score=27.18 Aligned_cols=51 Identities=12% Similarity=-0.087 Sum_probs=37.8
Q ss_pred CcEEEEEEEEEecceEEEEeCC-CceeeEeccccCcccccCcccccccCCEEEEEEE
Q psy9769 950 GRLVWGVLKEKMPGGVRVEFDG-DISGVFPTSAMSQATRTLVYTRFVIDTVIVCQIL 1005 (1026)
Q Consensus 950 G~~v~G~V~~i~~~G~fV~~~~-~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl 1005 (1026)
.....|+|+....--=||.-++ +-+=|+|.++|... ...+++||.|.+.|.
T Consensus 16 ~~~~~G~Vkwf~KGfGFI~~ddg~~DvFvH~s~i~~~-----~~~L~~G~~V~F~v~ 67 (97)
T 2ytx_A 16 QARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEFTIK 67 (97)
T ss_dssp CCCEEEEECCCCSSEEEEECSSSCCCEEEETTTCCSC-----TTSCCSCCEEEEEEC
T ss_pred CcceeEEEEEEeCCceEEecCCCCceEEEEehHhccc-----cCCCCCCCEEEEEEE
Confidence 5678999998833225667655 47899999999543 245789999999884
No 436
>1jjg_A M156R; beta barrel, S1 motif, OB fold, MYXV156R, NESG project, structural genomics, EIF-2A homolog, PSI, protein structure initiative; NMR {Myxoma virus} SCOP: b.40.4.5
Probab=32.36 E-value=36 Score=27.92 Aligned_cols=57 Identities=12% Similarity=0.124 Sum_probs=41.3
Q ss_pred cccccccCcccccccccccccceeeeecccceeeeeec------------cccccCceEEEEEeeeeec
Q psy9769 558 INTTLETGLVLPACVHSKEDHGYLLDVGVKNTRAFIKY------------DSVILGQIVTCMISKIKVA 614 (1026)
Q Consensus 558 ~~~~l~~G~~v~g~V~sv~d~g~~v~~G~~~~~gf~~~------------~~~~~G~~v~~~v~~~~~~ 614 (1026)
+..++.+|.+..|.|.-....-++-=+++.+.+|++-. ++-.+|..|++.|+.++.-
T Consensus 26 ~~~~~~~g~VtkGiVy~kd~~fyV~L~dY~glEaii~dYvnv~~dr~~klkkkLVGKtIkVqVIRvD~l 94 (102)
T 1jjg_A 26 SAMDLSPGSVHEGIVYFKDGIFKVRLLGYEGHECILLDYLNYRQDTLDRLKERLVGRVIKTRVVRADGL 94 (102)
T ss_dssp CCCCCCSSCEEEEEEEEETTEEEEECTTTSSCEEEECTTCCSSCCCCCHHHHHHTTCEEEEEEEEECSS
T ss_pred eccccCCCceEeeEEEEeCCEEEEEecCCCCceeeeehhhhhhHHHHHHHHHHhcCceEEEEEEEeccE
Confidence 34488899999999876544444433478788888873 2255899999999987653
No 437
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=31.73 E-value=41 Score=29.27 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=27.6
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIE 191 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 191 (1026)
++.+|+..++..|+.+++..|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 567899999999999999999999999875
No 438
>1yez_A MM1357; MAR30, autostructure, northeast structural genomics, PSI, PR structure initiative, northeast structural genomics consort NESG; NMR {Methanosarcina mazei} SCOP: b.40.4.12
Probab=31.27 E-value=1.4e+02 Score=23.18 Aligned_cols=49 Identities=6% Similarity=-0.006 Sum_probs=32.6
Q ss_pred CCCcEEEEEEEEEecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEeCC
Q psy9769 948 KPGRLVWGVLKEKMPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYEDG 1010 (1026)
Q Consensus 948 ~~G~~v~G~V~~i~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd~~ 1010 (1026)
+.|++++.+|..+...|-=|--.+|-.=++|. --+||+|+++|.++.+.
T Consensus 12 ~~~~~~~~~I~~l~~~G~Gva~~~g~~vfV~~--------------alPGE~V~v~i~k~kk~ 60 (68)
T 1yez_A 12 EEGEVYDVTIQDIARQGDGIARIEGFVIFVPG--------------TKVGDEVRIKVERVLPK 60 (68)
T ss_dssp CTTEEEEEECCEEETTTEEEEEETTEEEEEES--------------CCTTCEEEEEEEEECSS
T ss_pred CCCCEEEEEEEEcCCCccEEEEECCEEEECcC--------------CCCCCEEEEEEEEecCC
Confidence 55899998888887666444333343334432 14899999999987654
No 439
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=31.15 E-value=1.7e+02 Score=33.20 Aligned_cols=104 Identities=10% Similarity=0.175 Sum_probs=53.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
+..++.|+.+ ..+..||.....-..+.....+ -.+++. -++++.+.|+.++.+.+||.....-..+..-. ..
T Consensus 438 ~~~l~~~~~d----~~v~~w~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~-~~ 510 (577)
T 2ymu_A 438 DQTIASASDD----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-SS 510 (577)
T ss_dssp SSEEEEEETT----SEEEEEETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCS-SC
T ss_pred CCEEEEEcCC----CEEEEEECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC-CC
Confidence 3444455433 3577788655443333221111 112222 36788888998999999996543322222111 11
Q ss_pred ceeEEEE-ECCEEEEEeccCCCCCCCEEEEEECCCCcEE
Q psy9769 399 STLGVAV-LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWN 436 (1026)
Q Consensus 399 ~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 436 (1026)
. .+++. -++++.+.||.+ ..+..||.......
T Consensus 511 v-~~l~~s~dg~~l~s~~~d-----g~v~lwd~~~~~~~ 543 (577)
T 2ymu_A 511 V-RGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQ 543 (577)
T ss_dssp E-EEEEECTTSSCEEEEETT-----SEEEEECTTSCEEE
T ss_pred E-EEEEEcCCCCEEEEEECc-----CEEEEEeCCCCEEE
Confidence 1 12222 267777777765 46888886544333
No 440
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=30.55 E-value=5e+02 Score=27.29 Aligned_cols=141 Identities=9% Similarity=0.045 Sum_probs=80.3
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcC--CCCccccceeeEEE--CCEEEEEeccC-CCeEEEeCCCCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVA--EMPTRRCRAGLVFL--HEKVYAVGGFN-GSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~-~~~~~yd~~~~~W~~~~~ 393 (1026)
++.||+.-. ..+.++++++....-..+. .+..| .++++- ++.||+.--.. +.++++++....-+.+..
T Consensus 127 ~g~ly~~d~----~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 127 HDKLYWTDS----GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp TTEEEEEET----TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred CCeEEEEcC----CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 466777643 2357888888765433332 22233 234444 68999986544 789999887544333322
Q ss_pred CcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEECCEEEEEeC-CCceeeEE
Q psy9769 394 MEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVLNGCLYAENL-DGRILGCV 470 (1026)
Q Consensus 394 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG-~~~~~~~~ 470 (1026)
-.. ..-.+.+.- +++||+.-.. ...++++|+....-..+.... .....++++.++.||+... .+.+..++
T Consensus 200 ~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 200 THL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 111 111234443 7899998432 368999998754333322211 1223466668999999974 45566666
Q ss_pred cCc
Q psy9769 471 KEI 473 (1026)
Q Consensus 471 ~~~ 473 (1026)
..+
T Consensus 273 ~~~ 275 (349)
T 3v64_C 273 KFT 275 (349)
T ss_dssp TTT
T ss_pred ccC
Confidence 433
No 441
>2ytv_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=30.47 E-value=33 Score=27.87 Aligned_cols=50 Identities=4% Similarity=-0.036 Sum_probs=36.2
Q ss_pred cEEEEEEEEEecceEEEEeCCC--ceeeEeccccCcccccCcccccccCCEEEEEEEE
Q psy9769 951 RLVWGVLKEKMPGGVRVEFDGD--ISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 951 ~~v~G~V~~i~~~G~fV~~~~~--i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
+...|+|+.+..--=||.-+++ -+=|+|.++|. .. ..+++||.|++.|..
T Consensus 7 ~~~~G~V~~~~KGfGFI~~ddg~g~DvFvH~s~i~-~g-----~~l~~G~~V~F~v~~ 58 (79)
T 2ytv_A 7 GLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQ-DG-----IELQAGDEVEFSVIL 58 (79)
T ss_dssp SBCCEEEEECCSSEEEESCCCSSSSSEEEETTTCC-SS-----CCCCTTCEEECBCEE
T ss_pred CcccEEEEEecccceeEeCCCCCCCcEEEEhHHcC-CC-----CcCCCCCEEEEEEEE
Confidence 4567888887444456666544 78999999996 21 357899999998764
No 442
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=30.32 E-value=5.6e+02 Score=27.84 Aligned_cols=114 Identities=18% Similarity=0.162 Sum_probs=56.7
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcC--
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEA-- 396 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~-- 396 (1026)
.+++.|+.+ ..+..||..+..-.. ...+. .....++.+ +|..++.|+.++.+.+||+....-..+...+.
T Consensus 163 ~~las~s~D----g~v~iwD~~~~~~~~-~~~~~-~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 163 SMVAVCLAD----GSIAVLQVTETVKVC-ATLPS-TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYE 236 (434)
T ss_dssp TEEEEEETT----SCEEEEEESSSEEEE-EEECG-GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCC
T ss_pred CEEEEEECC----CeEEEEEcCCCccee-eccCC-CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccC
Confidence 456666544 357888887763211 11111 122222222 57777889999999999998333333321111
Q ss_pred C-c--ceeEEEEECCEEEEEecc--CCC-CCCCEEEEEECCCC------cEEEccC
Q psy9769 397 R-R--STLGVAVLNSLIYAVGGF--DGS-SGLNSAEVYDPSTE------KWNMIAP 440 (1026)
Q Consensus 397 ~-r--~~~~~~~~~~~iyv~GG~--~~~-~~~~~v~~yd~~~~------~W~~~~~ 440 (1026)
. . ...+.....+..|+++-. ++. .....+..||.... .|....+
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~ 292 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFME 292 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCC
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEeccc
Confidence 1 0 112222234444443322 221 22467888887543 4666543
No 443
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomi 2, protein structure initiative; NMR {Shewanella oneidensis}
Probab=29.77 E-value=1.1e+02 Score=24.45 Aligned_cols=47 Identities=13% Similarity=0.072 Sum_probs=33.9
Q ss_pred EEEEEEEe---cceEEEEeCCCceeeEeccccC-cccccCcccccccCCEEEEEEE
Q psy9769 954 WGVLKEKM---PGGVRVEFDGDISGVFPTSAMS-QATRTLVYTRFVIDTVIVCQIL 1005 (1026)
Q Consensus 954 ~G~V~~i~---~~G~fV~~~~~i~Gl~~~~~ls-~~~~~~~~~~~~~G~~V~~~Vl 1005 (1026)
+|+|+... -|| ||+-++|-+=|+|.++|. .... ..+++||.|++.+.
T Consensus 2 ~G~Vkwfn~~KGfG-FI~~~dG~DvFvH~s~i~~~~g~----~~l~~G~~V~F~~~ 52 (74)
T 2kcm_A 2 KGKVVSYLAAKKYG-FIQGDDGESYFLHFSELLDKKDE----GKLVKGSMVHFDPT 52 (74)
T ss_dssp EEEEEEEETTTTEE-EEEETTSCEECCCGGGSSCSGGG----TTCCTTSEEEEEEE
T ss_pred CEEEEEEECCCCEE-EEecCCCceEEEEhhhcccCCCC----CCCCCCCEEEEEEE
Confidence 68888763 244 566666678899999996 3322 34689999999875
No 444
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=29.72 E-value=2.6e+02 Score=28.89 Aligned_cols=95 Identities=11% Similarity=0.048 Sum_probs=52.4
Q ss_pred cEEEEEECCCCcE-EEcCCCCccccceeeEEECCEEEEEeccC---------CCeEEEeCCCCeEEeCCCCcCCcceeEE
Q psy9769 334 RSVECYDFKTERW-QSVAEMPTRRCRAGLVFLHEKVYAVGGFN---------GSLRVYDPSTNEWSSAPPMEARRSTLGV 403 (1026)
Q Consensus 334 ~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---------~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 403 (1026)
..++.+|..+.+. ..+.. + .....+...+.+++.+... ..++.+| +.++..+.+- .....
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~ 221 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYA 221 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEE
T ss_pred ceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC----cceee
Confidence 5688999988887 66654 3 2223333333355555332 2466777 6777665431 22222
Q ss_pred EEECCEEEEEeccCC---CCCCCEEEEEECCCCcEEEccC
Q psy9769 404 AVLNSLIYAVGGFDG---SSGLNSAEVYDPSTEKWNMIAP 440 (1026)
Q Consensus 404 ~~~~~~iyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~ 440 (1026)
..-+|+.+++++... ......++.+| ++++..+..
T Consensus 222 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 222 VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc
Confidence 245665444444322 11246899999 677776654
No 445
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=29.67 E-value=1.7e+02 Score=32.22 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=38.3
Q ss_pred CEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCC
Q psy9769 366 EKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPST 432 (1026)
Q Consensus 366 ~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 432 (1026)
+.+++.|+.++.+.+||..+..-.. ...+ ......++.+ +|+.++.|+.+ ..+..||+..
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~ 223 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTL 223 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT-----SCEEEECTTC
T ss_pred CCEEEEEECCCeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCC
Confidence 6788889999999999998764221 1111 1122223333 67777788765 4688999873
No 446
>1g6p_A Cold shock protein TMCSP; greek-KEY, beta barrel, OB-fold, structural genomics; NMR {Thermotoga maritima} SCOP: b.40.4.5
Probab=29.54 E-value=97 Score=23.97 Aligned_cols=49 Identities=16% Similarity=-0.012 Sum_probs=34.2
Q ss_pred EEEEEEEec-ce-EEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEE
Q psy9769 954 WGVLKEKMP-GG-VRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 954 ~G~V~~i~~-~G-~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
+|+|+...+ .| =||.-++|=+=++|.++|..... ..+++||.|.+.+..
T Consensus 2 ~G~Vk~fn~~kGfGFI~~~~g~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~ 52 (66)
T 1g6p_A 2 RGKVKWFDSKKGYGFITKDEGGDVFVHWSAIEMEGF----KTLKEGQVVEFEIQE 52 (66)
T ss_dssp CEEEEEEETTTTEEEEEETTSCBCBBCSSSSCCSSC----CCCCSSSEEEEEEEC
T ss_pred cEEEEEEECCCCEEEEecCCCceEEEEhHHccccCC----CCCCCCCEEEEEEEE
Confidence 588887742 22 46666677788999999954322 346899999998753
No 447
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=29.34 E-value=2.5e+02 Score=33.23 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=77.4
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCC--CCccccceeeEE--ECCEEEEEe-ccCCCeEEEeCCCCeEEeC--
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAE--MPTRRCRAGLVF--LHEKVYAVG-GFNGSLRVYDPSTNEWSSA-- 391 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~G-G~~~~~~~yd~~~~~W~~~-- 391 (1026)
++.||+.-. ....++++++....-..+.. +..|+ ++++ .++.||+.- |..+.++++++....-+.+
T Consensus 464 ~g~LY~tD~----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~ 536 (699)
T 1n7d_A 464 HSNIYWTDS----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 536 (699)
T ss_dssp SSBCEECCT----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred CCcEEEEec----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence 456666522 23568888887665444422 22222 2333 367888875 2236788887754333222
Q ss_pred CCCcCCcceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCC-CCcceeEEEEECCEEEEEeC-CCcee
Q psy9769 392 PPMEARRSTLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMS-TRRSSVGVGVLNGCLYAENL-DGRIL 467 (1026)
Q Consensus 392 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG-~~~~~ 467 (1026)
..+..|+ ++++ .+++||+.-.. ...|++||+....-+.+...+ ......++++.++.||+.-. .+.+.
T Consensus 537 ~~l~~Pn---Glavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~ 608 (699)
T 1n7d_A 537 ENIQWPN---GITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF 608 (699)
T ss_dssp SSCSSCC---CEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEE
T ss_pred CCCCCcc---EEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEE
Confidence 1232232 2333 25789987532 368999998754444443321 12233456667889999864 45666
Q ss_pred eEEcCc
Q psy9769 468 GCVKEI 473 (1026)
Q Consensus 468 ~~~~~~ 473 (1026)
.++..+
T Consensus 609 ~~d~~~ 614 (699)
T 1n7d_A 609 SANRLT 614 (699)
T ss_dssp EEETTT
T ss_pred EEEccC
Confidence 666543
No 448
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=28.49 E-value=53 Score=28.78 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=27.7
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIE 191 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 191 (1026)
++.+|+.+++..|+.+++..|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 677899999999999999999999999875
No 449
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=28.12 E-value=2.6e+02 Score=34.88 Aligned_cols=99 Identities=15% Similarity=-0.046 Sum_probs=57.8
Q ss_pred cEEEEEECCCCcEEEcCCCCccccceeeEEECCEEEEEeccCCCeE-EEeCCCCeEEeCCCCcCCcceeEEEEECCEEEE
Q psy9769 334 RSVECYDFKTERWQSVAEMPTRRCRAGLVFLHEKVYAVGGFNGSLR-VYDPSTNEWSSAPPMEARRSTLGVAVLNSLIYA 412 (1026)
Q Consensus 334 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 412 (1026)
..++.++..+.....+...+..+....... +|+.+++++....++ +||..+.....+.. ........+..-+|+.++
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la 394 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAV 394 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCC-CCCSEEEEEECTTSSEEE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecC-CccceeeeEECCCCCEEE
Confidence 467888887777666544333122222223 665555555466788 89998877666651 112222222223666666
Q ss_pred EeccCCCCCCCEEEEEECCCCcEEEcc
Q psy9769 413 VGGFDGSSGLNSAEVYDPSTEKWNMIA 439 (1026)
Q Consensus 413 ~GG~~~~~~~~~v~~yd~~~~~W~~~~ 439 (1026)
+++.+ ..++.||+.+++-..+.
T Consensus 395 ~~~~~-----~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 395 VANDR-----FEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEETT-----SEEEEEETTTCCEEEEE
T ss_pred EECCC-----CeEEEEECCCCceEEec
Confidence 66543 48999999988876654
No 450
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=28.08 E-value=3.7e+02 Score=28.75 Aligned_cols=65 Identities=12% Similarity=0.030 Sum_probs=36.7
Q ss_pred CCEEEEEeccCC----CCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CC--EEEEEe-CCCceeeEEcCc
Q psy9769 407 NSLIYAVGGFDG----SSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NG--CLYAEN-LDGRILGCVKEI 473 (1026)
Q Consensus 407 ~~~iyv~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~--~lyv~G-G~~~~~~~~~~~ 473 (1026)
++++|+...... ....+.++++|+.+.+- +..++.+...++++.. ++ .+|+.. +.+.+..+|..+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 578999754211 11247899999877554 3333333333444433 44 467766 466666776644
No 451
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=27.32 E-value=1.3e+02 Score=35.41 Aligned_cols=102 Identities=10% Similarity=0.051 Sum_probs=58.0
Q ss_pred eEEEeCCCCeEEeCCCCcCC---cceeEEEEE---CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEE
Q psy9769 378 LRVYDPSTNEWSSAPPMEAR---RSTLGVAVL---NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVG 451 (1026)
Q Consensus 378 ~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 451 (1026)
+++-+-.-.+|+.+...... +..++.++. .+.+|++|+..+......+++=+-...+|+.+. +|.... +.++
T Consensus 67 vyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~-~p~~~~-~~l~ 144 (685)
T 3f6k_A 67 LYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD-LPFHPL-TQMM 144 (685)
T ss_dssp EEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE-CSSCBS-SCCE
T ss_pred EEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc-CCCCCc-eEEE
Confidence 44545556789998743221 112333432 347999886433222355666555677899875 332221 2334
Q ss_pred EE---CCEEEEEeCCCceeeEEcCcccEEEeec
Q psy9769 452 VL---NGCLYAENLDGRILGCVKEITDWGLIIE 481 (1026)
Q Consensus 452 ~~---~~~lyv~GG~~~~~~~~~~~~~W~~~~~ 481 (1026)
.. .+.||+.|..+.++.-.+...+|+.+..
T Consensus 145 ~~P~~~~~l~a~~~~~gly~S~DgG~TW~~i~~ 177 (685)
T 3f6k_A 145 YSPQNSDYLLALSTENGLWVSKNFGGKWEEIHK 177 (685)
T ss_dssp EETTEEEEEEEEBTTCCEEEESSTTSSEEEEES
T ss_pred EecCCCCEEEEEECCCCEEEEeCCCCCcEEeec
Confidence 43 2467776655666666666788998865
No 452
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=26.42 E-value=1.3e+02 Score=24.41 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=36.4
Q ss_pred EEEEEEEEecceEEEEeC-CCceee-EeccccCcc-cccCc--ccccccCCEEEEEEEEEeCCeeeech
Q psy9769 953 VWGVLKEKMPGGVRVEFD-GDISGV-FPTSAMSQA-TRTLV--YTRFVIDTVIVCQILKYEDGELLLTE 1016 (1026)
Q Consensus 953 v~G~V~~i~~~G~fV~~~-~~i~Gl-~~~~~ls~~-~~~~~--~~~~~~G~~V~~~Vl~vd~~~~~~~~ 1016 (1026)
+.|.|++|.... |.|. +-|..| -|- |+-. .+.++ -..+++||.|++.+...+.....+|.
T Consensus 6 ~~G~V~~vd~~~--iTi~H~pI~~l~wPa--MTM~F~v~~~~~l~~lk~Gd~V~F~~~~~~~g~~~it~ 70 (82)
T 2l55_A 6 AVGRIQSIGERS--LIIAHEAIPSAQWGA--MTMEFAAPPAGLPQGLKAGDRVAFSFRLDPHGMATLVT 70 (82)
T ss_dssp EEEEEEECCSSE--EEEEECCCTTTTCCC--EEEEEECCTTCCCSSCSTTCEEEEEEEEETTTEEEEEE
T ss_pred EeEEEEEEcccc--EEEecCCccccCCCc--eEEEEEcCChhHhhcCCCCCEEEEEEEECCCCeEEEEE
Confidence 589999998877 5553 223332 110 1111 12222 35799999999999877654777763
No 453
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.80 E-value=6.3e+02 Score=28.15 Aligned_cols=131 Identities=10% Similarity=0.160 Sum_probs=64.4
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCc
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARR 398 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r 398 (1026)
+..++.|+.+ ..+..||.....-..+.....+ -.+++. -++...+.|+.++.+.+||.....-..+....
T Consensus 315 ~~~l~t~~~d----~~i~~w~~~~~~~~~~~~~~~~--v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~--- 385 (577)
T 2ymu_A 315 GQTIASASDD----KTVKLWNRNGQHLQTLTGHSSS--VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS--- 385 (577)
T ss_dssp SSEEEEEETT----SCEEEEETTSCEEEEECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCS---
T ss_pred CCEEEEEeCC----CeEEEEeCCCCeeEEEeCCCCC--EEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCC---
Confidence 3444555433 2466777665544433221111 112222 25677788888889999997654443332211
Q ss_pred ceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE-CCEEEEEeCCCce
Q psy9769 399 STLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL-NGCLYAENLDGRI 466 (1026)
Q Consensus 399 ~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~ 466 (1026)
....++.+ +++.++.|+.+ ..+..||.....-..+.....+ -.+++.. +++..+.|+.++.
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~--v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEEEECCSSC--EEEEEECTTSSEEEEEETTSE
T ss_pred CCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCCC--eEEEEECCCCCEEEEEcCCCE
Confidence 11222222 66777777754 4678888644333332221111 1122222 5666666654443
No 454
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=25.69 E-value=4.9e+02 Score=25.60 Aligned_cols=99 Identities=10% Similarity=0.056 Sum_probs=57.9
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCC----CcEEEc--------CCCCcc--ccceeeEEE---CCEEEEEeccCCCeEE
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKT----ERWQSV--------AEMPTR--RCRAGLVFL---HEKVYAVGGFNGSLRV 380 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~----~~W~~~--------~~~p~~--r~~~~~~~~---~~~iyv~GG~~~~~~~ 380 (1026)
..+.+|++-| +..|+||..+ +....- +.+|.. ...--+|+. ++++|.|-|. ..|+
T Consensus 69 ~~g~~~fFkg------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~--~yw~ 140 (225)
T 3oyo_A 69 EASEAYVFSG------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN--KYVR 140 (225)
T ss_dssp STTEEEEEET------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT--EEEE
T ss_pred CCCeEEEEcC------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC--eEEE
Confidence 4678888877 4788887532 222211 223321 012223333 6899999764 5889
Q ss_pred EeCCCCeEEeCC-----CCcC------CcceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECC
Q psy9769 381 YDPSTNEWSSAP-----PMEA------RRSTLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPS 431 (1026)
Q Consensus 381 yd~~~~~W~~~~-----~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 431 (1026)
||..+++....| ..|. +..--++.. .++++|.+-| +..|+||..
T Consensus 141 ~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 141 IAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred EECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 997776654321 1221 222234444 3799999988 678999987
No 455
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=24.91 E-value=4.9e+02 Score=28.42 Aligned_cols=104 Identities=12% Similarity=0.038 Sum_probs=55.6
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEE---EcCCCCccccceeeEEE--CCEEEEEeccCCCeEEEeCCCCeEEeCCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQ---SVAEMPTRRCRAGLVFL--HEKVYAVGGFNGSLRVYDPSTNEWSSAPP 393 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~---~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~yd~~~~~W~~~~~ 393 (1026)
++.||+....+......+..+++.. .|. .++.++ .-+.+++. ++.||+.--.++.+++||+.+.....+..
T Consensus 190 G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~~l~~~~---~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~ 265 (430)
T 3tc9_A 190 ADSMIITNDQNNNDRPNNYILTRES-GFKVITELTKGQ---NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT 265 (430)
T ss_dssp SSEEEEEECCSCTTSEEEEEEEGGG-TSCSEEEEEECS---SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCCCCcccceEEEEeCCC-ceeeeeeeccCC---CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE
Confidence 3458887654333334566666543 232 333222 22344444 58999987667789999998776533222
Q ss_pred CcCCcceeEEEEE-CC-EEEEEeccCCCCCCCEEEEEECC
Q psy9769 394 MEARRSTLGVAVL-NS-LIYAVGGFDGSSGLNSAEVYDPS 431 (1026)
Q Consensus 394 ~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~ 431 (1026)
.+....-..++.. ++ .||+.--. .+.+++|++.
T Consensus 266 ~~~~~~P~gia~~pdG~~lyv~d~~-----~~~I~~~~~d 300 (430)
T 3tc9_A 266 IQDSGWEFHIQFHPSGNYAYIVVVN-----QHYILRSDYD 300 (430)
T ss_dssp CSSSSCCEEEEECTTSSEEEEEETT-----TTEEEEEEEE
T ss_pred cCCCCcceeEEEcCCCCEEEEEECC-----CCEEEEEeCC
Confidence 2211111123332 44 49988432 2578886654
No 456
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=24.87 E-value=61 Score=28.40 Aligned_cols=32 Identities=9% Similarity=-0.053 Sum_probs=28.6
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIELH 193 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~~~ 193 (1026)
++.+|+.+++..|+.+++..|.+.|.+++.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999998653
No 457
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=24.74 E-value=62 Score=29.53 Aligned_cols=30 Identities=23% Similarity=0.248 Sum_probs=27.0
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYIE 191 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i~ 191 (1026)
++.+|+..++..|+.+++..|.+.|.+|+.
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 577899999999999999999999998863
No 458
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.06 E-value=6.2e+02 Score=26.22 Aligned_cols=113 Identities=10% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCEEEEEec-c-CC--CeEEEeCCCCeEEeCCCC-cC---Ccce-eEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCc
Q psy9769 365 HEKVYAVGG-F-NG--SLRVYDPSTNEWSSAPPM-EA---RRST-LGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEK 434 (1026)
Q Consensus 365 ~~~iyv~GG-~-~~--~~~~yd~~~~~W~~~~~~-p~---~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 434 (1026)
+|++|+..- + ++ .++.++ +.+-...+.. .. .... ++++.- +++||++.-.........+.+||+.+++
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~ 104 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ 104 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe
Confidence 688998842 1 23 677777 4444433321 01 1122 333332 5899998521100113689999999887
Q ss_pred EEEccCCC----CC-cceeEEEEE--CCEEEEEe----CCCceeeEEcCc-ccEEEe
Q psy9769 435 WNMIAPMS----TR-RSSVGVGVL--NGCLYAEN----LDGRILGCVKEI-TDWGLI 479 (1026)
Q Consensus 435 W~~~~~~p----~~-r~~~~~~~~--~~~lyv~G----G~~~~~~~~~~~-~~W~~~ 479 (1026)
-...-.++ .+ .....+++- ++.+|+.. +.+.+..++..+ ..|+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 105 LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 43222222 11 122344444 57999985 345666777654 346655
No 459
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=23.58 E-value=4.9e+02 Score=29.92 Aligned_cols=135 Identities=7% Similarity=0.039 Sum_probs=70.8
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEECCCCc--------EEEcCC-CC-ccccceeeEEECCEEEEEeccCCCeEEEeCCCCe
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYDFKTER--------WQSVAE-MP-TRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTNE 387 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd~~~~~--------W~~~~~-~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~~ 387 (1026)
.++.+++.||.+ ..+..||..++. ...+.. .. ....-.+++...+. ++.||.++.+..||..++.
T Consensus 139 PDG~~LAsgs~D----GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 139 PIESSIVVGNED----GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp SSSSCEEEEETT----SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred CCCCEEEEEcCC----CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 456667777754 368889988763 122210 11 11122344555556 7888999999999998765
Q ss_pred ----EEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEE--E-CCEEEEE
Q psy9769 388 ----WSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGV--L-NGCLYAE 460 (1026)
Q Consensus 388 ----W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~lyv~ 460 (1026)
|..+.+.... .-.+++..+ ...+.++ + ..+..||..++.=..... .....-..++. . ++...++
T Consensus 214 ~~~~~~tL~~~h~~-~V~svaFsg-~~LASa~-~-----~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~ 284 (588)
T 2j04_A 214 HQPVSRMIQNASRR-KITDLKIVD-YKVVLTC-P-----GYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLM 284 (588)
T ss_dssp SCCCEEEEECCCSS-CCCCEEEET-TEEEEEC-S-----SEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEE
T ss_pred cccceeeecccccC-cEEEEEEEC-CEEEEEe-C-----CeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEE
Confidence 3333211111 111222224 4445544 1 589999998776633321 11111222333 2 4567777
Q ss_pred eCCCce
Q psy9769 461 NLDGRI 466 (1026)
Q Consensus 461 GG~~~~ 466 (1026)
++.++.
T Consensus 285 a~edG~ 290 (588)
T 2j04_A 285 SNKTSY 290 (588)
T ss_dssp CSSCEE
T ss_pred EcCCCC
Confidence 764443
No 460
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=23.55 E-value=6.9e+02 Score=26.60 Aligned_cols=140 Identities=13% Similarity=0.096 Sum_probs=77.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE--ECCEEEEEeccCCCeEEEeCCCCeEEeC--CCC
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF--LHEKVYAVGGFNGSLRVYDPSTNEWSSA--PPM 394 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~yd~~~~~W~~~--~~~ 394 (1026)
++.||+.-- ....++++++.......+...... .-.++++ .++.||+.-...+.++++++....-..+ ..+
T Consensus 127 ~~~ly~~D~----~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l 201 (386)
T 3v65_B 127 RELVFWSDV----TLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL 201 (386)
T ss_dssp TTEEEEEET----TTTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSC
T ss_pred CCeEEEEeC----CCCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCC
Confidence 456777632 235788999988766554221111 1123343 3789999987777889988865443322 223
Q ss_pred cCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCC-CceeeE
Q psy9769 395 EARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLD-GRILGC 469 (1026)
Q Consensus 395 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~-~~~~~~ 469 (1026)
..|+ +.++. ++.||+.--.. ...++++++....-+.+..-. -....++++- +++||+.-.. +.+..+
T Consensus 202 ~~P~---giavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 202 EKPR---AIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERA 273 (386)
T ss_dssp SCEE---EEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCCc---EEEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence 3332 33443 68899874211 368999998765444332211 1112234442 7899998643 344444
Q ss_pred Ec
Q psy9769 470 VK 471 (1026)
Q Consensus 470 ~~ 471 (1026)
+.
T Consensus 274 d~ 275 (386)
T 3v65_B 274 NL 275 (386)
T ss_dssp CT
T ss_pred eC
Confidence 43
No 461
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=22.97 E-value=1e+02 Score=30.76 Aligned_cols=101 Identities=7% Similarity=0.025 Sum_probs=56.5
Q ss_pred CCcEEEEEcCCCCCCCcEEEEEE--CCCCcEE------Ec----CCCCcc--ccceeeEEE---CCEEEEEeccCCCeEE
Q psy9769 318 VPKVMLVVGGQAPKAIRSVECYD--FKTERWQ------SV----AEMPTR--RCRAGLVFL---HEKVYAVGGFNGSLRV 380 (1026)
Q Consensus 318 ~~~~i~v~GG~~~~~~~~~~~yd--~~~~~W~------~~----~~~p~~--r~~~~~~~~---~~~iyv~GG~~~~~~~ 380 (1026)
..+.+|+|-| +.+|+|+ +.+.... .+ +.+|.. -...-+|.. ++++|+|-| +..|+
T Consensus 71 ~~g~~~fFKg------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG--~~yw~ 142 (227)
T 3lp9_A 71 ENNEAFIFYE------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG--DQYAR 142 (227)
T ss_dssp STTEEEEEET------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEE
T ss_pred CCCEEEEEeC------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC--CEEEE
Confidence 4678999887 4788888 3211111 11 123310 112223332 589999976 35889
Q ss_pred EeCCCCeEEeC-C-----CCcC------CcceeEEEE--ECCEEEEEeccCCCCCCCEEEEEECCCC
Q psy9769 381 YDPSTNEWSSA-P-----PMEA------RRSTLGVAV--LNSLIYAVGGFDGSSGLNSAEVYDPSTE 433 (1026)
Q Consensus 381 yd~~~~~W~~~-~-----~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 433 (1026)
||..+++-... | .+|. +..--++.. .++++|.|-| +..|+||..+.
T Consensus 143 ~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 143 IDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp EETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred EeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 99876643221 1 1221 112223333 3689999988 67899998765
No 462
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.95 E-value=1.6e+02 Score=25.50 Aligned_cols=59 Identities=5% Similarity=-0.069 Sum_probs=41.5
Q ss_pred cEEEEEEEEEecceEE-EEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEEEe-CCeeee
Q psy9769 951 RLVWGVLKEKMPGGVR-VEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYE-DGELLL 1014 (1026)
Q Consensus 951 ~~v~G~V~~i~~~G~f-V~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd-~~~~~~ 1014 (1026)
..+.|.|+.....+.| |++++|..=|+|++ -+... .=..+.||.|.+....-| ..+..+
T Consensus 15 ge~~g~V~~~lgn~~f~V~l~nG~~~la~i~---GK~Rk--~IwI~~GD~VlVe~~~yd~~~kg~I 75 (111)
T 2dgy_A 15 QQQIVRVLRTPGNNLHEVETAQGQRFLVSMP---SKYRK--NIWIKRGDFLIVDPIEEGEKVKAEI 75 (111)
T ss_dssp SCEEEEEEECCSSSEEEEECTTSCEEEEECC---TTCCS--CCCCCSSCEEEEEECSSCSSCCEEE
T ss_pred CeEEEEEEEeCCCCEEEEEeCCCCEEEEEec---hhhcc--cEEEcCCCEEEEEecccCCcceEEE
Confidence 4578999999888854 88899988887765 22222 345789999998876655 444444
No 463
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=22.84 E-value=1.4e+02 Score=25.73 Aligned_cols=21 Identities=14% Similarity=0.059 Sum_probs=16.3
Q ss_pred ccccccccccCCCcEEEEEEE
Q psy9769 512 EEIPELSNLFSIGDLVVAKIL 532 (1026)
Q Consensus 512 ~~~~~~~~~~~vG~~v~~~v~ 532 (1026)
++...-.+.|++||.|++-|=
T Consensus 4 ~~~~~Y~~yF~~gqrv~V~ip 24 (109)
T 2l1t_A 4 ADGSEYGRYFEQLQKVNLTVR 24 (109)
T ss_dssp SCCSSGGGTCCTTCEEEEEEE
T ss_pred cchhHHHHhcCCCcEEEEEEE
Confidence 444555678999999999885
No 464
>3ts2_A Protein LIN-28 homolog A; microrna biogenesis, protein-RNA complex, PRE-element, CCHC knuckle; HET: GMP; 2.01A {Mus musculus} PDB: 3trz_A* 3ts0_A*
Probab=22.60 E-value=1.6e+02 Score=27.10 Aligned_cols=53 Identities=9% Similarity=-0.092 Sum_probs=37.3
Q ss_pred cEEEEEEEEEe---cceEEEEeC--------CCceeeEeccccCcccccCcccccccCCEEEEEEEEEe
Q psy9769 951 RLVWGVLKEKM---PGGVRVEFD--------GDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILKYE 1008 (1026)
Q Consensus 951 ~~v~G~V~~i~---~~G~fV~~~--------~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~vd 1008 (1026)
...+|+|+... -|| ||.-. ++-+=|+|.+.|..... ..+++||.|++.|..=+
T Consensus 8 ~~~~G~Vkwfn~~kGfG-FI~~~~~~g~p~~~g~DvFvH~s~i~~~g~----~~l~eG~~V~f~~~~g~ 71 (148)
T 3ts2_A 8 LHGAGICKWFNVRMGFG-FLSMTARAGVALDPPVDVFVHQSKLHMEGF----RSLKEGEAVEFTFKKSA 71 (148)
T ss_dssp EEEEEEEEEEETTTTEE-EEEEEEETTEEEEEEEEEEEEGGGBCSSSS----CCCCTTCEEEEEEEEET
T ss_pred ccceeEEEEEECCCCee-EEeeCccccccCCCCccEEEEhHHhcccCC----ccCCCCCEEEEEEEEcc
Confidence 45789999873 345 45543 46788999999954332 34689999999987643
No 465
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=22.44 E-value=1.1e+02 Score=28.30 Aligned_cols=17 Identities=24% Similarity=0.304 Sum_probs=12.8
Q ss_pred cccccccccCCceEEee
Q psy9769 638 SQVSLLNLVPGMKVIAN 654 (1026)
Q Consensus 638 ~~~~~~~l~~G~~v~~~ 654 (1026)
....|+.|.+|++|-..
T Consensus 86 t~l~w~~L~vGqvVMvN 102 (161)
T 3db3_A 86 TIIKWQDLEVGQVVMLN 102 (161)
T ss_dssp CBCCGGGCCTTCEEEEE
T ss_pred EeccHHHCCcCcEEEEe
Confidence 46789999999875543
No 466
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=22.30 E-value=1.5e+02 Score=27.27 Aligned_cols=54 Identities=13% Similarity=0.222 Sum_probs=34.0
Q ss_pred ecceEEEEeC------------CCceeeEe----ccccCc-ccccCcccccccCCEEE----------EEEEEEeCCeee
Q psy9769 961 MPGGVRVEFD------------GDISGVFP----TSAMSQ-ATRTLVYTRFVIDTVIV----------CQILKYEDGELL 1013 (1026)
Q Consensus 961 ~~~G~fV~~~------------~~i~Gl~~----~~~ls~-~~~~~~~~~~~~G~~V~----------~~Vl~vd~~~~~ 1013 (1026)
-+..+||++. .||.||+. ..++.. -....+...|++||.|+ +.|.++|.++.+
T Consensus 42 fPGYVfVe~~~~~~~~~~v~~t~gV~~fvg~~v~~~Ei~~il~~~~~~~~~~~Gd~VrI~~Gpf~g~~g~V~~vd~~k~~ 121 (152)
T 3p8b_B 42 VKGYIFVEAPNKGVVDEAIRGIRHARGVLPGEVPFKEIEHFLEEKPAVSGLEPGDLVEVIAGPFKGQKAKVVKIDESKDE 121 (152)
T ss_dssp CCSEEEEEESSHHHHHHHHTTCTTEEEECSSCBCGGGTGGGCCCSCTTTTCCTTCEEEECSSTTTTCEEEEEEEETTTTE
T ss_pred CCcEEEEEEEchHHHHHHHhCCCCEEEeCCCCCCHHHHHHHhCcCCccccCCCCCEEEEeeecCCCCEEEEEEEeCCCCE
Confidence 3556788773 35666654 344332 11123445799999997 689999988766
Q ss_pred e
Q psy9769 1014 L 1014 (1026)
Q Consensus 1014 ~ 1014 (1026)
+
T Consensus 122 v 122 (152)
T 3p8b_B 122 V 122 (152)
T ss_dssp E
T ss_pred E
Confidence 5
No 467
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=22.11 E-value=6.9e+02 Score=26.09 Aligned_cols=141 Identities=11% Similarity=0.008 Sum_probs=70.7
Q ss_pred EEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEEE-CCEEEEEeccCCCeEEEeCCCCeEEeCCCCcCCcc
Q psy9769 321 VMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVFL-HEKVYAVGGFNGSLRVYDPSTNEWSSAPPMEARRS 399 (1026)
Q Consensus 321 ~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~yd~~~~~W~~~~~~p~~r~ 399 (1026)
.+.+.+|.. -..+..+|+.+.+.......... -.+++.. +|++++.|+ ++.+.+++..+..............
T Consensus 147 ~la~as~~~---d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 147 VAAIASSKV---PAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp CEEEEESCS---SCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTE
T ss_pred EEEEEECCC---CCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCC
Confidence 444555522 24688899988765432221111 1223322 566655554 5667788877766543222211122
Q ss_pred ee--EEEEECCEEEEEeccCCCCCCCEEEEEECCCCcEEEcc--CCCCCcceeEEEEE--CCEEEEEeCCCceee
Q psy9769 400 TL--GVAVLNSLIYAVGGFDGSSGLNSAEVYDPSTEKWNMIA--PMSTRRSSVGVGVL--NGCLYAENLDGRILG 468 (1026)
Q Consensus 400 ~~--~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~ 468 (1026)
.. .+..-+++.++.++.++.. ...+..+|.....+.... .+........++.+ ++++.+.|+.++...
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred CEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 22 2233488888887765432 235667777666554332 11111112222223 778888887654433
No 468
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=21.99 E-value=7.4e+02 Score=26.37 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=58.9
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCc--E-EEcCC--CCccccceeeE-EE--CCEEEEEeccCCCeEEEeCCCCeEEe
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTER--W-QSVAE--MPTRRCRAGLV-FL--HEKVYAVGGFNGSLRVYDPSTNEWSS 390 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~--W-~~~~~--~p~~r~~~~~~-~~--~~~iyv~GG~~~~~~~yd~~~~~W~~ 390 (1026)
.+.+|+|-| +..|+|+..... + ..+.. +|..-..--+| .. ++++|+|-| +..|+||..+++-..
T Consensus 236 ~g~~~fFkg------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--~~yw~yd~~~~~v~~ 307 (365)
T 3ba0_A 236 RNQVFLFKD------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--NQYWRYDERRQMMDP 307 (365)
T ss_dssp GTEEEEEET------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--TEEEEEETTTTEECS
T ss_pred CCEEEEEeC------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCCcceecC
Confidence 567888876 367777653211 1 12322 23211122223 23 479999966 468899987765332
Q ss_pred C---------CCCcCCcceeEEEEE-CCEEEEEeccCCCCCCCEEEEEECCCCcEEE
Q psy9769 391 A---------PPMEARRSTLGVAVL-NSLIYAVGGFDGSSGLNSAEVYDPSTEKWNM 437 (1026)
Q Consensus 391 ~---------~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 437 (1026)
. +.+| ..--++... ++++|.|-| +..|+||..+.+-..
T Consensus 308 gyPk~I~~~f~g~p--~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 308 GYPKLITKNFQGIG--PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SCCCCHHHHSTTCC--SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCcchhhcCCCCC--CccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 1 1222 222344445 899999977 678999988776543
No 469
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=21.94 E-value=53 Score=25.27 Aligned_cols=26 Identities=12% Similarity=0.227 Sum_probs=23.0
Q ss_pred cccccccCCEEEEEEEEEeCCeeeec
Q psy9769 990 VYTRFVIDTVIVCQILKYEDGELLLT 1015 (1026)
Q Consensus 990 ~~~~~~~G~~V~~~Vl~vd~~~~~~~ 1015 (1026)
+.+.+.+||.++++|++++.+..+|-
T Consensus 10 ~GE~I~Igd~I~I~Vl~i~g~~VrlG 35 (63)
T 2bti_A 10 VGETLMIGDEVTVTVLGVKGNQVRIG 35 (63)
T ss_dssp TTCEEEETTTEEEEEEEEETTEEEEE
T ss_pred CCCeEEeCCCEEEEEEEEeCCEEEEE
Confidence 45678899999999999999999983
No 470
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=21.70 E-value=53 Score=25.80 Aligned_cols=25 Identities=20% Similarity=0.151 Sum_probs=22.5
Q ss_pred cccccccCCEEEEEEEEEeCCeeee
Q psy9769 990 VYTRFVIDTVIVCQILKYEDGELLL 1014 (1026)
Q Consensus 990 ~~~~~~~G~~V~~~Vl~vd~~~~~~ 1014 (1026)
+.+.+.+||.|+++|++++.+..+|
T Consensus 8 ~GEsI~IGd~I~ItVl~v~g~~VrL 32 (70)
T 2jpp_A 8 VGESINIGDDITITILGVSGQQVRI 32 (70)
T ss_dssp TTCEEEETTTEEEEEEEEETTEEEE
T ss_pred CCCeEEECCCEEEEEEEEeCCEEEE
Confidence 4567889999999999999999998
No 471
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=21.47 E-value=8.5e+02 Score=26.90 Aligned_cols=156 Identities=13% Similarity=0.031 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCC----cEEEcC-------CCCccccceeeEEECCEEEEEeccC------CCeEEE
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTE----RWQSVA-------EMPTRRCRAGLVFLHEKVYAVGGFN------GSLRVY 381 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~----~W~~~~-------~~p~~r~~~~~~~~~~~iyv~GG~~------~~~~~y 381 (1026)
.+++|+-|. ..+.++++|..++ +-...- .....+-++..+.-+| |||..--+ +.+.++
T Consensus 95 r~~l~v~~l----~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 95 RRFLIVPGL----RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp SCEEEEEBT----TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred CCEEEEccC----CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Q ss_pred eCCCCe----EEeCCCCcCCcceeEEEEECCEEEEEe---------ccCCC----CCCCEEEEEECCCCcEEEccCCCCC
Q psy9769 382 DPSTNE----WSSAPPMEARRSTLGVAVLNSLIYAVG---------GFDGS----SGLNSAEVYDPSTEKWNMIAPMSTR 444 (1026)
Q Consensus 382 d~~~~~----W~~~~~~p~~r~~~~~~~~~~~iyv~G---------G~~~~----~~~~~v~~yd~~~~~W~~~~~~p~~ 444 (1026)
|..|.+ |..-.....-.+.+...--.+.+|+.- |++.. ...+.+..||..+.+-...-++..+
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Q ss_pred cceeEEEEE-----CCEEEEEe------CCCceeeEEcCcccEEEe
Q psy9769 445 RSSVGVGVL-----NGCLYAEN------LDGRILGCVKEITDWGLI 479 (1026)
Q Consensus 445 r~~~~~~~~-----~~~lyv~G------G~~~~~~~~~~~~~W~~~ 479 (1026)
-..+.-... +...||.. -.+.+..++-+..+|...
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
No 472
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=21.43 E-value=80 Score=27.50 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=26.5
Q ss_pred cCCcchhhHHHhhhhcCchhHHHHHHhhh
Q psy9769 162 LHPTNCLGIRAFADLHSCLDLLSTAENYI 190 (1026)
Q Consensus 162 l~~~n~~~~~~~a~~~~~~~L~~~~~~~i 190 (1026)
++.+|+..++..|+.+++..|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 56789999999999999999999999886
No 473
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=21.25 E-value=3.1e+02 Score=26.38 Aligned_cols=102 Identities=12% Similarity=0.135 Sum_probs=0.0
Q ss_pred eeEEECCEEEEEeccCCCeEEEeCCC----------CeEEeCCCCcCCcceeEEEEECCEEEEEeccCCCCCCCEEEEEE
Q psy9769 360 GLVFLHEKVYAVGGFNGSLRVYDPST----------NEWSSAPPMEARRSTLGVAVLNSLIYAVGGFDGSSGLNSAEVYD 429 (1026)
Q Consensus 360 ~~~~~~~~iyv~GG~~~~~~~yd~~~----------~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 429 (1026)
+++..+|.+|+| .+..+|+++... ..|.-+|. .-.++....++++|+|-| +..|+|+
T Consensus 10 A~~~~~g~~~fF--kg~~~w~~~~~~~~~gyP~~I~~~w~glP~----~iDAa~~~~~g~~yfFkg-------~~yw~~~ 76 (196)
T 3c7x_A 10 TVAMLRGEMFVF--KERWFWRVRNNQVMDGYPMPIGQFWRGLPA----SINTAYERKDGKFVFFKG-------DKHWVFD 76 (196)
T ss_dssp EEEEETTEEEEE--ETTEEEEEETTEECTTCSEEHHHHSTTCCS----SCCEEEECTTSCEEEEET-------TEEEEEE
T ss_pred EEEEcCCEEEEE--ECCEEEEEECCccCCCCceEhhHhccCCCC----CccEEEEeCCCcEEEecC-------CEEEEEe
Q ss_pred CCCCcE---EEccC----CCCCcceeEEEEE-CCEEEEEeCCCceeeEEcCccc
Q psy9769 430 PSTEKW---NMIAP----MSTRRSSVGVGVL-NGCLYAENLDGRILGCVKEITD 475 (1026)
Q Consensus 430 ~~~~~W---~~~~~----~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 475 (1026)
..+... ..+.. +|...-.++.... ++++|.|-| +..+.|+..+.+
T Consensus 77 ~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-~~yw~yd~~~~~ 129 (196)
T 3c7x_A 77 EASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-NKYYRFNEELRA 129 (196)
T ss_dssp TTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-TEEEEEETTTTE
T ss_pred CCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-CEEEEEeCCccc
No 474
>3ulj_A LIN28B, DNA-binding protein; beta barrel, cold shock domain fold, nucleic acid binding, D binding protein; 1.06A {Silurana} PDB: 4a4i_A
Probab=21.07 E-value=2.2e+02 Score=23.56 Aligned_cols=52 Identities=12% Similarity=-0.076 Sum_probs=35.5
Q ss_pred CcEEEEEEEEE---ecceEEEE--------eCCCceeeEeccccCcccccCcccccccCCEEEEEEEE
Q psy9769 950 GRLVWGVLKEK---MPGGVRVE--------FDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 950 G~~v~G~V~~i---~~~G~fV~--------~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
-...+|+|+-. +-|| ||. ..++-+=|+|.+.|..... ..+..||.|++.|.+
T Consensus 6 ~~r~tG~VKWFn~~KGfG-FI~~~~~~~~p~dgg~DvFVH~s~i~~~g~----~~L~eG~~V~f~v~~ 68 (90)
T 3ulj_A 6 VLRGSGHCKWFNVRMGFG-FISMTSREGSPLENPVDVFVHQSKLYMEGF----RSLKEGEPVEFTFKK 68 (90)
T ss_dssp CEEEEEEEEEEETTTTEE-EEEEEEETTEEEEEEEEEEEEGGGBCCSSS----CCCCTTCEEEEEEEE
T ss_pred ccccceEEEEeeCCCCeE-EeEecCcCcCCCCCCccEEEEeehhcccCC----CccCCCCEEEEEEEE
Confidence 34678999865 3344 444 2345678999999954332 346899999998865
No 475
>2lss_A Cold shock-like protein; CSD, CSP, oligonucleotide binding F fold, RNA binding protein, DNA binding protein; NMR {Rickettsia rickettsii}
Probab=26.23 E-value=21 Score=28.26 Aligned_cols=52 Identities=13% Similarity=0.024 Sum_probs=35.1
Q ss_pred cEEEEEEEEE---ecceEEEEeCCCceeeEeccccCcccccCcccccccCCEEEEEEEE
Q psy9769 951 RLVWGVLKEK---MPGGVRVEFDGDISGVFPTSAMSQATRTLVYTRFVIDTVIVCQILK 1006 (1026)
Q Consensus 951 ~~v~G~V~~i---~~~G~fV~~~~~i~Gl~~~~~ls~~~~~~~~~~~~~G~~V~~~Vl~ 1006 (1026)
+.++|+|+.. +-||-+..-.++=+=++|.++|..... ..+.+||.|++.+..
T Consensus 3 ~~~~G~Vk~fn~~kGfGFI~~~~gg~dvFvH~s~i~~~g~----~~l~~G~~V~f~~~~ 57 (70)
T 2lss_A 3 TNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAVDAAGL----HSLEEGQDVIFDLEE 57 (70)
Confidence 3467888865 346654443345788999999954322 346899999987653
No 476
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=20.32 E-value=4.3e+02 Score=27.90 Aligned_cols=71 Identities=14% Similarity=0.105 Sum_probs=42.1
Q ss_pred CCEEEEEeccCC-----CCCCCEEEEEECCCCcEEEccCCCCCcceeEEEEE--CCEEEEEeCCCceeeEEcCcccEEEe
Q psy9769 407 NSLIYAVGGFDG-----SSGLNSAEVYDPSTEKWNMIAPMSTRRSSVGVGVL--NGCLYAENLDGRILGCVKEITDWGLI 479 (1026)
Q Consensus 407 ~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~W~~~ 479 (1026)
++++|+....++ ....+.++.||+.+.+ .+..++.+. ..+++.. +..||+.++ +.+..+|..+..-+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 478999864221 1124689999988765 444444444 4455444 457888876 7676675544311555
Q ss_pred ec
Q psy9769 480 IE 481 (1026)
Q Consensus 480 ~~ 481 (1026)
..
T Consensus 341 ~~ 342 (361)
T 2oiz_A 341 RT 342 (361)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 477
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=20.31 E-value=6.1e+02 Score=24.77 Aligned_cols=127 Identities=12% Similarity=0.137 Sum_probs=65.2
Q ss_pred CcEEEEEcCCCCCCCcEEEEEECCCCcEE--Ec----CCCCccccceeeEEECCEEEEEeccCCCeEEEeCCCC-eEE--
Q psy9769 319 PKVMLVVGGQAPKAIRSVECYDFKTERWQ--SV----AEMPTRRCRAGLVFLHEKVYAVGGFNGSLRVYDPSTN-EWS-- 389 (1026)
Q Consensus 319 ~~~i~v~GG~~~~~~~~~~~yd~~~~~W~--~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~yd~~~~-~W~-- 389 (1026)
.+.+|+|=| +..|+++.....+. .+ +.+|.. -. ++...++++|+|=| +..|+|+..++ +=.
T Consensus 28 ~g~~yfFkg------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG--~~yw~~~~~~~~~~~~g 97 (219)
T 1hxn_A 28 HGATYVFSG------SHYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD--TKVYVFLTKGGYTLVNG 97 (219)
T ss_dssp TSCEEEEET------TEEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET--TEEEEEECSSSCEECTT
T ss_pred CCcEEEEeC------CEEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC--CEEEEEeCCCCceecCC
Confidence 466787766 35566654432221 12 233422 22 33345899999965 35888886532 111
Q ss_pred ---eCC---CCcCC--ccee-EEEEE--CCEEEEEeccCCCCCCCEEEEEECCC---CcEEEccCCCCCcceeEEEE---
Q psy9769 390 ---SAP---PMEAR--RSTL-GVAVL--NSLIYAVGGFDGSSGLNSAEVYDPST---EKWNMIAPMSTRRSSVGVGV--- 452 (1026)
Q Consensus 390 ---~~~---~~p~~--r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~--- 452 (1026)
.+. .+|.. ...- ++... ++++|+|-| +..|+||..+ ..|...+..|.. -.++...
T Consensus 98 yPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~~-vdAa~~~~~~ 169 (219)
T 1hxn_A 98 YPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHEK-VDGALCMEKP 169 (219)
T ss_dssp CCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCSC-CSEEEEESSC
T ss_pred CCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCCC-cCEEEEcccc
Confidence 111 23322 1112 22322 689999988 6789999653 234433322222 2222221
Q ss_pred --------ECCEEEEEeCC
Q psy9769 453 --------LNGCLYAENLD 463 (1026)
Q Consensus 453 --------~~~~lyv~GG~ 463 (1026)
.++.+|.|-|.
T Consensus 170 ~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 170 LGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp SSSCCSCSSSCEEEEEETT
T ss_pred ccccceeccCCeEEEEECC
Confidence 34679999874
No 478
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.12 E-value=2.6e+02 Score=30.82 Aligned_cols=127 Identities=17% Similarity=0.158 Sum_probs=64.9
Q ss_pred cEEEEEcCCCCCCCcEEEEEECCCCcEEEcCCCCccccceeeEE-ECCEEEEEeccC---C-CeEEEeCCCCeEE---eC
Q psy9769 320 KVMLVVGGQAPKAIRSVECYDFKTERWQSVAEMPTRRCRAGLVF-LHEKVYAVGGFN---G-SLRVYDPSTNEWS---SA 391 (1026)
Q Consensus 320 ~~i~v~GG~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~---~-~~~~yd~~~~~W~---~~ 391 (1026)
+.||+.-.. ..++++|+.+++...+.. +..+ -.++++ -+|.||+..-.+ . .+..++.. ..|. .+
T Consensus 153 g~Lyv~D~~-----~~I~~id~~~g~v~~~~~-~~~~-P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-~~~~~~~~~ 224 (433)
T 4hw6_A 153 DDLYWVGQR-----DAFRHVDFVNQYVDIKTT-NIGQ-CADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-SGFTERLSL 224 (433)
T ss_dssp CEEEEECBT-----SCEEEEETTTTEEEEECC-CCSC-EEEEEECTTCCEEEEECCSCTTSEEEEEECGG-GTTCCEEEE
T ss_pred CEEEEEeCC-----CCEEEEECCCCEEEEeec-CCCC-ccEEEECCCCCEEEEcCCCCcccceEEEEECC-CCeeccccc
Confidence 678877321 689999998888877654 1111 122222 245699885322 1 23445442 2222 22
Q ss_pred CCCcCCcceeEEEEE--CCEEEEEeccCCCCCCCEEEEEECCCCcE-EEccCCCCCcceeEEEEE--CCEEEEEeC
Q psy9769 392 PPMEARRSTLGVAVL--NSLIYAVGGFDGSSGLNSAEVYDPSTEKW-NMIAPMSTRRSSVGVGVL--NGCLYAENL 462 (1026)
Q Consensus 392 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~lyv~GG 462 (1026)
+.+..| .++++. ++.||+.-.. ...+++||+.++.. ..+...........++.. ++.||+.--
T Consensus 225 ~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 225 CNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp EECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred cccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 222222 223332 6789986432 25799999986665 333211111112233333 346998853
Done!