BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy977
(485 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P32028|FD4_DROME Fork head domain-containing protein FD4 OS=Drosophila melanogaster
GN=fd96Ca PE=2 SV=2
Length = 372
Score = 238 bits (608), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 110/153 (71%), Positives = 123/153 (80%), Gaps = 3/153 (1%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP RE+YG+QKPPYSYISLTAMAIWSSPEKMLPLSDIY+FI DRFPYYR+NTQRWQNS
Sbjct: 1 MPRPSRESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLE 120
LRHNLSFNDCF+K+PRRPDRPGKGAYWALHP A DMFENGS LRRRKRFKL K D+ LL
Sbjct: 61 LRHNLSFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLN 120
Query: 121 ATYPVLKAEN---YTSIKETKSEPLKPTTLSNA 150
L N +T+ + + P ++NA
Sbjct: 121 EELTALANLNRFFFTTRNGGSAAHMSPLDMNNA 153
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 273 ALDMFENGSFLRRRKRFKLPKVDQSLLEATYPVLKAEN---YTSIKETKSEPLKPTTLSN 329
A DMFENGS LRRRKRFKL K D+ LL L N +T+ + + P ++N
Sbjct: 93 AFDMFENGSLLRRRKRFKLHKNDKDLLNEELTALANLNRFFFTTRNGGSAAHMSPLDMNN 152
Query: 330 A 330
A
Sbjct: 153 A 153
>sp|Q99853|FOXB1_HUMAN Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 PE=2 SV=3
Length = 325
Score = 218 bits (555), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 105/116 (90%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP R TY DQKPPYSYISLTAMAI SSPEKMLPLS+IY+FI DRFPYYR NTQRWQNS
Sbjct: 1 MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQ 116
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP+ DMFENGSFLRRRKRFK+ K D
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDH 116
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQ 296
DMFENGSFLRRRKRFK+ K D
Sbjct: 95 DMFENGSFLRRRKRFKVLKSDH 116
>sp|Q64732|FOXB1_MOUSE Forkhead box protein B1 OS=Mus musculus GN=Foxb1 PE=2 SV=2
Length = 325
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/116 (83%), Positives = 105/116 (90%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP R TY DQKPPYSYISLTAMAI SSPEKMLPLS+IY+FI DRFPYYR NTQRWQNS
Sbjct: 1 MPRPGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQ 116
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP+ DMFENGSFLRRRKRFK+ K D
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDH 116
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQ 296
DMFENGSFLRRRKRFK+ K D
Sbjct: 95 DMFENGSFLRRRKRFKVLKSDH 116
>sp|O93529|FOXB1_XENLA Forkhead box protein B1 OS=Xenopus laevis GN=foxb1 PE=2 SV=1
Length = 319
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/116 (81%), Positives = 102/116 (87%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP R TY DQKPPYSYISLTAMAI S EKMLPLS+IY+FI DRFPYYR NTQRWQNS
Sbjct: 1 MPRPGRNTYSDQKPPYSYISLTAMAIQGSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQ 116
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP DMFENGSFLRRRKRFK+ K D
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPRCGDMFENGSFLRRRKRFKVMKSDH 116
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQ 296
DMFENGSFLRRRKRFK+ K D
Sbjct: 95 DMFENGSFLRRRKRFKVMKSDH 116
>sp|Q5VYV0|FOXB2_HUMAN Forkhead box protein B2 OS=Homo sapiens GN=FOXB2 PE=2 SV=1
Length = 432
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 105/121 (86%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP + +Y DQKPPYSYISLTAMAI S EKMLPLSDIY+FI +RFPYYR +TQRWQNS
Sbjct: 1 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLE 120
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP DMFENGSFLRRRKRFK+ + D + L
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLH 120
Query: 121 A 121
A
Sbjct: 121 A 121
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQSLLEA 301
DMFENGSFLRRRKRFK+ + D + L A
Sbjct: 95 DMFENGSFLRRRKRFKVLRADHTHLHA 121
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 OS=Mus musculus GN=Foxb2 PE=2 SV=1
Length = 428
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 105/121 (86%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP + +Y DQKPPYSYISLTAMAI S EKMLPLSDIY+FI +RFPYYR +TQRWQNS
Sbjct: 1 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLE 120
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP DMFENGSFLRRRKRFK+ + D + L
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHAHLH 120
Query: 121 A 121
+
Sbjct: 121 S 121
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQSLLEA 301
DMFENGSFLRRRKRFK+ + D + L +
Sbjct: 95 DMFENGSFLRRRKRFKVLRADHAHLHS 121
>sp|P32029|FD5_DROME Fork head domain-containing protein FD5 OS=Drosophila melanogaster
GN=fd96Cb PE=2 SV=2
Length = 271
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 103/118 (87%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP + +YGDQKPPYSYISLTAMAI SP+++LPLS+IYRFI D+FP+YR+NTQ+WQNS
Sbjct: 1 MPRPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSL 118
LRHNLSFNDCF+K+PR + GKG+YW LHP A DMFENGS LRRRKRF++ ++++ +
Sbjct: 61 LRHNLSFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDI 118
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 273 ALDMFENGSFLRRRKRFKLPKVDQSL 298
A DMFENGS LRRRKRF++ ++++ +
Sbjct: 93 AFDMFENGSLLRRRKRFRVKQLEKDI 118
>sp|Q8JIT6|FOXB2_XENLA Forkhead box protein B2 OS=Xenopus laevis GN=foxb2 PE=2 SV=1
Length = 317
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 92/103 (89%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP + +Y +QKPPYSYISLTAMAI S EKMLPLSDIY+FI DRFPYYR NTQRWQNS
Sbjct: 1 MPRPGKSSYSEQKPPYSYISLTAMAIQGSQEKMLPLSDIYKFIMDRFPYYRENTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFL 103
LRHNLSFNDCF+KIPRRPD+PGKG++WALHP DMFENGSFL
Sbjct: 61 LRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFL 103
>sp|Q6P839|FOXA4_XENTR Forkhead box protein A4 OS=Xenopus tropicalis GN=foxa4 PE=2 SV=1
Length = 399
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 97/136 (71%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
PR R Y KPPYSYISL MAI +P KM+ L++IY++I D FPYYR+N QRWQNS+
Sbjct: 108 PRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQNSI 167
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLEA 121
RH+LSFNDCFVK+PR P++PGKG+YW LHP + +MFENG +LRR+KRFK + E
Sbjct: 168 RHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCERSKSGEREK 227
Query: 122 TYPVLKAENYTSIKET 137
EN S+KET
Sbjct: 228 KVNKPGDENGGSLKET 243
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 275 DMFENGSFLRRRKRFKLPKVDQSLLEATYPVLKAENYTSIKET 317
+MFENG +LRR+KRFK + E EN S+KET
Sbjct: 201 NMFENGCYLRRQKRFKCERSKSGEREKKVNKPGDENGGSLKET 243
>sp|P34683|LIN31_CAEEL Protein lin-31 OS=Caenorhabditis elegans GN=lin-31 PE=4 SV=1
Length = 237
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 90/103 (87%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MPRP +++Y +QKPPYSYI LT MAI S +KMLPL++IY++I DRFP+YR+NTQRWQNS
Sbjct: 1 MPRPGKDSYDEQKPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNS 60
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFL 103
LRHNLSFNDCF+KIPRR DRPGKG+YWA+HP A MFENGS L
Sbjct: 61 LRHNLSFNDCFIKIPRRADRPGKGSYWAVHPNASGMFENGSCL 103
>sp|Q7T1R4|FOXA2_XENTR Forkhead box protein A2 OS=Xenopus tropicalis GN=foxa2 PE=2 SV=1
Length = 434
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 138 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 197
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 198 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEK 249
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 275 DMFENGSFLRRRKRFKLPK 293
+MFENG +LRR+KRFK K
Sbjct: 231 NMFENGCYLRRQKRFKCEK 249
>sp|Q91765|FXA2A_XENLA Forkhead box protein A2-A OS=Xenopus laevis GN=foxa2-a PE=1 SV=1
Length = 434
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 138 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 197
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 198 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEK 249
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 275 DMFENGSFLRRRKRFKLPK 293
+MFENG +LRR+KRFK K
Sbjct: 231 NMFENGCYLRRQKRFKCEK 249
>sp|P14734|FKH_DROME Protein fork head OS=Drosophila melanogaster GN=fkh PE=1 SV=1
Length = 510
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 98/136 (72%), Gaps = 10/136 (7%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P R +Y KPPYSYISL MAI ++P +ML LS+IY+FI D FP+YR+N QRWQNS+
Sbjct: 199 PTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 258
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVD------ 115
RH+LSFNDCFVKIPR PD+PGKG++W LHP + +MFENG +LRR+KRFK K +
Sbjct: 259 RHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLH 318
Query: 116 ----QSLLEATYPVLK 127
S LEAT P K
Sbjct: 319 KSPSHSSLEATSPGKK 334
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 10/43 (23%)
Query: 275 DMFENGSFLRRRKRFKLPKVD----------QSLLEATYPVLK 307
+MFENG +LRR+KRFK K + S LEAT P K
Sbjct: 292 NMFENGCYLRRQKRFKDEKKEAIRQLHKSPSHSSLEATSPGKK 334
>sp|P33206|FXA4B_XENLA Forkhead box protein A4-B OS=Xenopus laevis GN=foxa4-b PE=2 SV=1
Length = 400
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 96/136 (70%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
PR R Y KPPYSYISL MAI +P KM+ L++IY++I D FPYYR+N QRWQNS+
Sbjct: 108 PRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIVDLFPYYRQNQQRWQNSI 167
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLEA 121
RH+LSFNDCF+K+PR P++PGKG+YW LHP + +MFENG +LRR+KRFK + E
Sbjct: 168 RHSLSFNDCFIKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCERSKSGEGER 227
Query: 122 TYPVLKAENYTSIKET 137
E S+KET
Sbjct: 228 KGNKPGDETGGSLKET 243
>sp|O42097|FOXA2_ORYLA Hepatocyte nuclear factor 3-beta OS=Oryzias latipes GN=foxa2 PE=2
SV=1
Length = 415
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML L++IY++I D FP+YR+N QRWQNS+
Sbjct: 139 PKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLAEIYQWIMDLFPFYRQNQQRWQNSI 198
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 199 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEK 250
>sp|Q07342|FOXA2_DANRE Forkhead box protein A2 OS=Danio rerio GN=foxa2 PE=2 SV=1
Length = 409
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 140 PKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 199
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 200 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDK 251
>sp|P84961|FXA2B_XENLA Forkhead box protein A2-B OS=Xenopus laevis GN=foxa2-b PE=2 SV=1
Length = 433
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS++Y++I D FP+YR+N QRWQNS+
Sbjct: 136 PKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEVYQWIMDLFPFYRQNQQRWQNSI 195
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 196 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDK 247
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 275 DMFENGSFLRRRKRFKLPK 293
+MFENG +LRR+KRFK K
Sbjct: 229 NMFENGCYLRRQKRFKCDK 247
>sp|P35583|FOXA2_MOUSE Hepatocyte nuclear factor 3-beta OS=Mus musculus GN=Foxa2 PE=1 SV=2
Length = 459
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 148 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 207
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 208 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEK 259
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 275 DMFENGSFLRRRKRFKLPK 293
+MFENG +LRR+KRFK K
Sbjct: 241 NMFENGCYLRRQKRFKCEK 259
>sp|P33205|FXA4A_XENLA Forkhead box protein A4-A OS=Xenopus laevis GN=foxa4-a PE=1 SV=3
Length = 399
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 89/112 (79%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
PR R Y KPPYSYISL MAI +P KM+ L++IY++I D FPYYR+N QRWQNS+
Sbjct: 108 PRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQNSI 167
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCFVK+PR P++PGKG+YW LHP + +MFENG +LRR+KRFK +
Sbjct: 168 RHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCER 219
>sp|Q6LD29|FXA1A_XENLA Forkhead box protein A1-A OS=Xenopus laevis GN=foxa1-a PE=2 SV=2
Length = 429
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 87/109 (79%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
R +Y KPPYSYISL MAI +P KML LS+IY++I D FPYYR+N QRWQNS+RH+L
Sbjct: 152 RRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 211
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKV 114
SFNDCFVK+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 212 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKT 260
>sp|Q9Y261|FOXA2_HUMAN Hepatocyte nuclear factor 3-beta OS=Homo sapiens GN=FOXA2 PE=1 SV=1
Length = 457
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 148 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 207
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
RH+LSFNDCF+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK K
Sbjct: 208 RHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEK 259
>sp|P32315|FXA1B_XENLA Forkhead box protein A1-B OS=Xenopus laevis GN=foxa1-b PE=2 SV=1
Length = 427
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 87/109 (79%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
R +Y KPPYSYISL MAI +P KML LS+IY++I D FPYYR+N QRWQNS+RH+L
Sbjct: 150 RRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 209
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKV 114
SFNDCF+K+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 210 SFNDCFIKVSRSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKT 258
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 16/20 (80%)
Query: 275 DMFENGSFLRRRKRFKLPKV 294
+MFENG +LRR+KRFK K
Sbjct: 239 NMFENGCYLRRQKRFKCEKT 258
>sp|Q3Y598|FOXA3_BOVIN Hepatocyte nuclear factor 3-gamma OS=Bos taurus GN=FOXA3 PE=2 SV=1
Length = 351
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 89/111 (80%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MP+ R KPPYSYISL MAI +P KML LS+IY++I D FPYYR N QRWQNS
Sbjct: 106 MPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 165
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKL 111
+RH+LSFNDCFVK+ R PD+PGKG+YWALHP++ +MFENG +LRR+KRFKL
Sbjct: 166 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKL 216
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 250 VKMDRYSGQPYLPAQQSEHSVSAALDMFENGSFLRRRKRFKL 291
VK+ R +P + + H S +MFENG +LRR+KRFKL
Sbjct: 177 VKVARSPDKPGKGSYWALHPSSG--NMFENGCYLRRQKRFKL 216
>sp|P55318|FOXA3_HUMAN Hepatocyte nuclear factor 3-gamma OS=Homo sapiens GN=FOXA3 PE=1
SV=2
Length = 350
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 89/111 (80%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
MP+ R KPPYSYISL MAI +P KML LS+IY++I D FPYYR N QRWQNS
Sbjct: 105 MPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 164
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKL 111
+RH+LSFNDCFVK+ R PD+PGKG+YWALHP++ +MFENG +LRR+KRFKL
Sbjct: 165 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKL 215
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 250 VKMDRYSGQPYLPAQQSEHSVSAALDMFENGSFLRRRKRFKL 291
VK+ R +P + + H S +MFENG +LRR+KRFKL
Sbjct: 176 VKVARSPDKPGKGSYWALHPSSG--NMFENGCYLRRQKRFKL 215
>sp|P55317|FOXA1_HUMAN Hepatocyte nuclear factor 3-alpha OS=Homo sapiens GN=FOXA1 PE=1
SV=2
Length = 472
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
+ +Y KPPYSYISL MAI +P KML LS+IY++I D FPYYR+N QRWQNS+RH+L
Sbjct: 163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
SFNDCFVK+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEK 270
>sp|P35582|FOXA1_MOUSE Hepatocyte nuclear factor 3-alpha OS=Mus musculus GN=Foxa1 PE=1
SV=2
Length = 468
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 87/108 (80%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
+ +Y KPPYSYISL MAI +P KML LS+IY++I D FPYYR+N QRWQNS+RH+L
Sbjct: 163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
SFNDCFVK+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEK 270
>sp|Q17241|SGF1_BOMMO Silk gland factor 1 OS=Bombyx mori GN=SGF1 PE=2 SV=1
Length = 349
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 90/110 (81%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
R +Y KPPYSYISL MAI ++P +ML LS+IY+FI D FP+YR+N QRWQNS+RH+L
Sbjct: 106 RRSYTHAKPPYSYISLITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 165
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVD 115
SFNDCFVK+PR PD+PGKG++W LHP + +MFENG FLRR+KRFK K +
Sbjct: 166 SFNDCFVKVPRTPDKPGKGSFWTLHPDSGNMFENGCFLRRQKRFKDEKKE 215
>sp|P35584|FOXA3_MOUSE Hepatocyte nuclear factor 3-gamma OS=Mus musculus GN=Foxa3 PE=1
SV=1
Length = 353
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 88/111 (79%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
M + R KPPYSYISL MAI +P KML LS+IY++I D FPYYR N QRWQNS
Sbjct: 107 MAKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 166
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKL 111
+RH+LSFNDCFVK+ R PD+PGKG+YWALHP++ +MFENG +LRR+KRFKL
Sbjct: 167 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKL 217
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 275 DMFENGSFLRRRKRFKL 291
+MFENG +LRR+KRFKL
Sbjct: 201 NMFENGCYLRRQKRFKL 217
>sp|Q8AWH1|FOXA1_XENTR Forkhead box protein A1 OS=Xenopus tropicalis GN=foxa1 PE=2 SV=1
Length = 428
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 86/108 (79%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
R +Y KPPYSYISL MAI +P KML LS+IY++I D F YYR+N QRWQNS+RH+L
Sbjct: 151 RRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSL 210
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
SFNDCFVK+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 211 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEK 258
>sp|P32183|FOXA3_RAT Hepatocyte nuclear factor 3-gamma OS=Rattus norvegicus GN=Foxa3
PE=1 SV=1
Length = 354
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 88/111 (79%)
Query: 1 MPRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNS 60
M + R KPPYSYISL MAI +P KML LS+IY++I D FPYYR N QRWQNS
Sbjct: 107 MAKGYRRPLTHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNS 166
Query: 61 LRHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKL 111
+RH+LSFNDCFVK+ R PD+PGKG+YWALHP++ +MFENG +LRR+KRFKL
Sbjct: 167 IRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKL 217
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 275 DMFENGSFLRRRKRFKL 291
+MFENG +LRR+KRFKL
Sbjct: 201 NMFENGCYLRRQKRFKL 217
>sp|P23512|FOXA1_RAT Hepatocyte nuclear factor 3-alpha OS=Rattus norvegicus GN=Foxa1
PE=1 SV=1
Length = 466
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 86/108 (79%)
Query: 6 RETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNL 65
+ +Y KPPYSYISL MAI +P KML LS+IY++I D FPYYR+N QRWQNS+RH+L
Sbjct: 163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222
Query: 66 SFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
SFN CFVK+ R PD+PGKG+YW LHP + +MFENG +LRR+KRFK K
Sbjct: 223 SFNACFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEK 270
>sp|Q17381|PHA4_CAEEL Defective pharyngeal development protein 4 OS=Caenorhabditis
elegans GN=pha-4 PE=1 SV=1
Length = 506
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 82/106 (77%)
Query: 8 TYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSF 67
TYG KPPYSYISL MAI S + L LS+IY +I D FPYY+ N QRWQNS+RH+LSF
Sbjct: 231 TYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSLSF 290
Query: 68 NDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPK 113
NDCFVK+ R PD+PGKG++W LH +MFENG +LRR+KRFK+ +
Sbjct: 291 NDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKE 336
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 275 DMFENGSFLRRRKRFKLPK 293
+MFENG +LRR+KRFK+ +
Sbjct: 318 NMFENGCYLRRQKRFKVKE 336
>sp|P32182|FOXA2_RAT Hepatocyte nuclear factor 3-beta OS=Rattus norvegicus GN=Foxa2 PE=1
SV=1
Length = 458
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Query: 2 PRPCRETYGDQKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSL 61
P+ R +Y KPPYSYISL MAI SP KML LS+IY++I D FP+YR+N QRWQNS+
Sbjct: 148 PKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSI 207
Query: 62 RHNLSFNDCFVKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
RH+LSFND F+K+PR PD+PGKG++W LHP + +MFENG +LRR+KRFK
Sbjct: 208 RHSLSFND-FLKVPRAPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFK 255
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/16 (75%), Positives = 15/16 (93%)
Query: 275 DMFENGSFLRRRKRFK 290
+MFENG +LRR+KRFK
Sbjct: 240 NMFENGCYLRRQKRFK 255
>sp|Q12950|FOXD4_HUMAN Forkhead box protein D4 OS=Homo sapiens GN=FOXD4 PE=2 SV=4
Length = 439
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 77/98 (78%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPP SYI+L MAI SP K L LS I FI+DRFPYYRR WQNS+RHNLS NDCFV
Sbjct: 104 KPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFV 163
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
KIPR P RPGKG YW+L PA+ DMF+NGSFLRRRKRF+
Sbjct: 164 KIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQ 201
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 250 VKMDRYSGQPYLPAQQSEHSVS-AALDMFENGSFLRRRKRFK 290
VK+ R +P P + + S+ A+ DMF+NGSFLRRRKRF+
Sbjct: 163 VKIPR---EPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQ 201
>sp|Q12952|FOXL1_HUMAN Forkhead box protein L1 OS=Homo sapiens GN=FOXL1 PE=2 SV=2
Length = 345
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 12 QKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCF 71
QKPPYSYI+L AMAI +PE+ + L+ IY+FI DRFP+Y N Q WQNS+RHNLS NDCF
Sbjct: 48 QKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCF 107
Query: 72 VKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLEATYPVLKAENY 131
VK+PR RPGKG+YW L P LDMFENG++ RR+++ PK EA P +AE +
Sbjct: 108 VKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRK---PKPGPGAPEAKRP--RAETH 162
Query: 132 TSIKETKSE 140
E + E
Sbjct: 163 QRSAEAQPE 171
>sp|Q64731|FOXL1_MOUSE Forkhead box protein L1 OS=Mus musculus GN=Foxl1 PE=2 SV=2
Length = 336
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 78/99 (78%)
Query: 12 QKPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCF 71
QKPPYSYI+L AMAI +PE+ + L+ IY+FI DRFP+Y N Q WQNS+RHNLS N+CF
Sbjct: 48 QKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECF 107
Query: 72 VKIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
VK+PR RPGKG+YW L P LDMFENG++ RR+++ K
Sbjct: 108 VKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146
>sp|Q9PTK2|FOXE4_XENLA Forkhead box protein E4 OS=Xenopus laevis GN=foxe4 PE=2 SV=1
Length = 365
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 73/89 (82%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L AMAI +SPE+ L L IY+FI +RFP+YR N+++WQNS+RHNL+ NDCFV
Sbjct: 48 KPPYSYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQNSIRHNLTLNDCFV 107
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGS 101
KIPR P PGKG YW L PAA DMF+NGS
Sbjct: 108 KIPREPGHPGKGNYWTLDPAAEDMFDNGS 136
>sp|Q99958|FOXC2_HUMAN Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 PE=1 SV=1
Length = 501
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 83/108 (76%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++PEK + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 72 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLE 120
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V + E
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEE 179
>sp|Q61850|FOXC2_MOUSE Forkhead box protein C2 OS=Mus musculus GN=Foxc2 PE=2 SV=2
Length = 494
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 81/102 (79%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++PEK + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 71 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 130
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKV 114
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V
Sbjct: 131 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDV 172
>sp|Q6NVT7|FOXC2_XENTR Forkhead box protein C2 OS=Xenopus tropicalis GN=foxc2 PE=2 SV=2
Length = 464
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 81/102 (79%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 72 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKV 114
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDV 173
>sp|Q9PVY8|FXC2B_XENLA Forkhead box protein C2-B OS=Xenopus laevis GN=foxc2-b PE=2 SV=2
Length = 461
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 81/98 (82%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 72 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
K+PR +PGKG+YW+L P + +MFENGSFLRRR+RFK
Sbjct: 132 KVPRDDKKPGKGSYWSLDPDSYNMFENGSFLRRRRRFK 169
>sp|Q02361|FD3_DROME Fork head domain-containing protein FD3 OS=Drosophila melanogaster
GN=fd59A PE=2 SV=2
Length = 456
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 72/98 (73%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI SP K L LS I FI RFPYY+ WQNS+RHNLS NDCF+
Sbjct: 85 KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQNSIRHNLSLNDCFI 144
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
K+PR P PGKG +W L P A DMF+NGSFLRRRKR+K
Sbjct: 145 KVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKRYK 182
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 273 ALDMFENGSFLRRRKRFK 290
A DMF+NGSFLRRRKR+K
Sbjct: 165 AEDMFDNGSFLRRRKRYK 182
>sp|Q68F77|FOXC1_XENTR Forkhead box protein C1 OS=Xenopus tropicalis GN=foxc1 PE=2 SV=1
Length = 495
Score = 142 bits (357), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 88/121 (72%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++PEK + L+ IY+FI +RFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 79 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQSLLEATYPVLKAENYT 132
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V + + L E++
Sbjct: 139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVVKDATKEDKDRLLKEHHG 198
Query: 133 S 133
S
Sbjct: 199 S 199
>sp|Q9DE25|FXC1A_DANRE Forkhead box C1-A OS=Danio rerio GN=foxc1a PE=2 SV=1
Length = 476
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 86/114 (75%), Gaps = 5/114 (4%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI +SP+K + L+ IY+FI +RFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 74 KPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 133
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLP-----KVDQSLLEA 121
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK K D+ + EA
Sbjct: 134 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAMKDKEDRGVKEA 187
>sp|Q9PVZ3|FXC1A_XENLA Forkhead box protein C1-A OS=Xenopus laevis GN=foxc1-a PE=2 SV=1
Length = 492
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI +RFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 79 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQ 116
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V +
Sbjct: 139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSK 182
>sp|Q9PVY9|FXC2A_XENLA Forkhead box protein C2-A OS=Xenopus laevis GN=foxc2-a PE=2 SV=1
Length = 465
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 74/91 (81%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 72 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFL 103
K+PR +PGKG+YW+L P + +MFENGSFL
Sbjct: 132 KVPRDDKKPGKGSYWSLDPDSYNMFENGSFL 162
>sp|Q32NP8|FXC1B_XENLA Forkhead box protein C1-B OS=Xenopus laevis GN=foxc1-b PE=2 SV=1
Length = 495
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 82/104 (78%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI +RFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 79 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFKLPKVDQ 116
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK V +
Sbjct: 139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSK 182
>sp|Q63246|FOXC2_RAT Forkhead box protein C2 (Fragment) OS=Rattus norvegicus GN=Foxc2
PE=3 SV=1
Length = 101
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 81/98 (82%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L+ MAI ++PEK + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 3 KPPYSYIALSTMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 62
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK
Sbjct: 63 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK 100
>sp|Q12948|FOXC1_HUMAN Forkhead box protein C1 OS=Homo sapiens GN=FOXC1 PE=1 SV=3
Length = 553
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 80/98 (81%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 78 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK
Sbjct: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK 175
>sp|Q61572|FOXC1_MOUSE Forkhead box protein C1 OS=Mus musculus GN=Foxc1 PE=2 SV=3
Length = 553
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 80/98 (81%)
Query: 13 KPPYSYISLTAMAIWSSPEKMLPLSDIYRFIADRFPYYRRNTQRWQNSLRHNLSFNDCFV 72
KPPYSYI+L MAI ++P+K + L+ IY+FI DRFP+YR N Q WQNS+RHNLS N+CFV
Sbjct: 78 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137
Query: 73 KIPRRPDRPGKGAYWALHPAALDMFENGSFLRRRKRFK 110
K+PR +PGKG+YW L P + +MFENGSFLRRR+RFK
Sbjct: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 188,105,456
Number of Sequences: 539616
Number of extensions: 8270308
Number of successful extensions: 25959
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 24897
Number of HSP's gapped (non-prelim): 1027
length of query: 485
length of database: 191,569,459
effective HSP length: 121
effective length of query: 364
effective length of database: 126,275,923
effective search space: 45964435972
effective search space used: 45964435972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)